mm9_v1_chr17_-_32557916_32557924	64.3615	FOX{I1,J2}.p2	AF149837|Pglyrp2|57757|peptidoglycan recognition protein 2	AF149838|Pglyrp2|57757|peptidoglycan recognition protein 2	AF315578|Pglyrp2|57757|peptidoglycan recognition protein 2	AF315584|Pglyrp2|57757|peptidoglycan recognition protein 2	AF317548|Pglyrp2|57757|peptidoglycan recognition protein 2	AK050019|Pglyrp2|57757|peptidoglycan recognition protein 2	NM_021319|Pglyrp2|57757|peptidoglycan recognition protein 2
mm9_v1_chr17_-_32557807_32557904	59.3791	FOX{I1,J2}.p2	EF204951|Pglyrp2|57757|peptidoglycan recognition protein 2	AY282722|Pglyrp2|57757|peptidoglycan recognition protein 2	BC019396|Pglyrp2|57757|peptidoglycan recognition protein 2
mm9_v1_chr15_+_103284200_103284376	37.2566	FOX{I1,J2}.p2	AK040192|Nckap1l|105855|NCK associated protein 1 like	NM_153505|Nckap1l|105855|NCK associated protein 1 like	AK149862|Nckap1l|105855|NCK associated protein 1 like	AK083390|Nckap1l|105855|NCK associated protein 1 like	BC037096|Nckap1l|105855|NCK associated protein 1 like	AK134039|Nckap1l|105855|NCK associated protein 1 like	BC030040|Nckap1l|105855|NCK associated protein 1 like	BC007186|Nckap1l|105855|NCK associated protein 1 like
mm9_v1_chr10_-_61960613_61960625	31.1043	FOX{I1,J2}.p2	AK087960|Srgn|19073|serglycin
mm9_v1_chr15_+_83393975_83394050	28.8052	FOX{I1,J2}.p2	NM_009775|Tspo|12257|translocator protein	AK151824|Tspo|12257|translocator protein	AK153273|Tspo|12257|translocator protein	AK165822|Tspo|12257|translocator protein	AK166125|Tspo|12257|translocator protein	AK151569|Tspo|12257|translocator protein	AK156489|Tspo|12257|translocator protein	AK172384|Tspo|12257|translocator protein	AK149743|Tspo|12257|translocator protein	AK151421|Tspo|12257|translocator protein	AK152860|Tspo|12257|translocator protein	AK153159|Tspo|12257|translocator protein	AK165450|Tspo|12257|translocator protein	AK150516|Tspo|12257|translocator protein	AK152082|Tspo|12257|translocator protein	AK152827|Tspo|12257|translocator protein	BC002055|Tspo|12257|translocator protein	D21207|Tspo|12257|translocator protein
mm9_v1_chr2_-_27118325_27118417	28.3104	FOX{I1,J2}.p2	AK012893|Vav2|22325|vav 2 oncogene	BC025845|Vav2|22325|vav 2 oncogene
mm9_v1_chr6_-_48658211_48658242	28.2821	FOX{I1,J2}.p2	AK030902|Gimap6|231931|GTPase, IMAP family member 6	AK087275|Gimap6|231931|GTPase, IMAP family member 6	AF503921|Gimap6|231931|GTPase, IMAP family member 6	NM_153175|Gimap6|231931|GTPase, IMAP family member 6
mm9_v1_chr18_-_35900005_35900208	24.786	FOX{I1,J2}.p2	DQ910493|Tmem173|72512|transmembrane protein 173	AK153868|Tmem173|72512|transmembrane protein 173	AK146284|Tmem173|72512|transmembrane protein 173	AX775911|Tmem173|72512|transmembrane protein 173	AK077788|Tmem173|72512|transmembrane protein 173	AK157370|Tmem173|72512|transmembrane protein 173	AK158458|Tmem173|72512|transmembrane protein 173	BC046640|Tmem173|72512|transmembrane protein 173	AK171612|Tmem173|72512|transmembrane protein 173	AK012006|Tmem173|72512|transmembrane protein 173	AK171065|Tmem173|72512|transmembrane protein 173	AK171203|Tmem173|72512|transmembrane protein 173	AK089405|Tmem173|72512|transmembrane protein 173	AK170724|Tmem173|72512|transmembrane protein 173	NM_028261|Tmem173|72512|transmembrane protein 173
mm9_v1_chr2_+_24242134_24242148	24.7003	FOX{I1,J2}.p2	AK150238|Psd4|215632|pleckstrin and Sec7 domain containing 4	AK155249|Psd4|215632|pleckstrin and Sec7 domain containing 4	AK169859|Psd4|215632|pleckstrin and Sec7 domain containing 4
mm9_v1_chr12_-_80084464_80084464	24.1966	FOX{I1,J2}.p2	BC057677|Tmem229b|268567|transmembrane protein 229B	NM_001170401|Tmem229b|268567|transmembrane protein 229B
mm9_v1_chr14_-_56407622_56407693	23.8821	FOX{I1,J2}.p2	AF178953|Ripk3|56532|receptor-interacting serine-threonine kinase 3	BC029210|Ripk3|56532|receptor-interacting serine-threonine kinase 3	AK154505|Ripk3|56532|receptor-interacting serine-threonine kinase 3	AK012177|Ripk3|56532|receptor-interacting serine-threonine kinase 3	NM_001164107|Ripk3|56532|receptor-interacting serine-threonine kinase 3	NM_001164108|Ripk3|56532|receptor-interacting serine-threonine kinase 3	NM_019955|Ripk3|56532|receptor-interacting serine-threonine kinase 3
mm9_v1_chr12_-_27141303_27141316	23.5745	FOX{I1,J2}.p2	NM_021384|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chr13_-_56280161_56280245	23.0327	FOX{I1,J2}.p2	AK036643|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	NM_001168615|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B	NM_145976|Tifab|212937|TRAF-interacting protein with forkhead-associated domain, family member B
mm9_v1_chr5_+_86500770_86500862	22.7559	FOX{I1,J2}.p2	AK162655|Stap1|56792|signal transducing adaptor family member 1	AK153661|Stap1|56792|signal transducing adaptor family member 1	BC057898|Stap1|56792|signal transducing adaptor family member 1	AK042475|Stap1|56792|signal transducing adaptor family member 1	BC145550|Stap1|56792|signal transducing adaptor family member 1	BC145828|Stap1|56792|signal transducing adaptor family member 1	BC145830|Stap1|56792|signal transducing adaptor family member 1	AK041474|Stap1|56792|signal transducing adaptor family member 1	NM_019992|Stap1|56792|signal transducing adaptor family member 1	AB036058|Stap1|56792|signal transducing adaptor family member 1
mm9_v1_chr11_+_87569075_87569079	21.9412	FOX{I1,J2}.p2	AK020764|A430104N18Rik|78591|RIKEN cDNA A430104N18 gene
mm9_v1_chr5_-_73127743_73127840	21.5383	FOX{I1,J2}.p2	BC120552|Txk|22165|TXK tyrosine kinase	NM_013698|Txk|22165|TXK tyrosine kinase	BC137710|Txk|22165|TXK tyrosine kinase	D43963|Txk|22165|TXK tyrosine kinase
mm9_v1_chr17_+_34442837_34442976	21.2917	FOX{I1,J2}.p2	AK155968|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X52642|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	BC132165|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	BC132163|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	AK160485|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X52641|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X07239|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M36940|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	D90032|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	U28489|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	U28490|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M36939|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	D90275|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	X00958|H2-Eb1|14969|histocompatibility 2, class II antigen E beta	M28408|H2-Eb1|14969|histocompatibility 2, class II antigen E beta
mm9_v1_chr7_+_134439804_134439861	20.3475	FOX{I1,J2}.p2	AK156251|Itgal|16408|integrin alpha L	AK172394|Itgal|16408|integrin alpha L	AK154115|Itgal|16408|integrin alpha L	AK169628|Itgal|16408|integrin alpha L	NM_008400|Itgal|16408|integrin alpha L
mm9_v1_chr6_-_48658182_48658205	20.2859	FOX{I1,J2}.p2	AK050328|Gimap6|231931|GTPase, IMAP family member 6	AK160244|Gimap6|231931|GTPase, IMAP family member 6	BC028779|Gimap6|231931|GTPase, IMAP family member 6
mm9_v1_chr1_+_173847645_173847838	19.4622	FOX{I1,J2}.p2	AF248636|Slamf6|30925|SLAM family member 6	AF248635|Slamf6|30925|SLAM family member 6	NM_030710|Slamf6|30925|SLAM family member 6	BC030031|Slamf6|30925|SLAM family member 6	AB196808|Slamf6|30925|SLAM family member 6	AB196809|Slamf6|30925|SLAM family member 6	AB196810|Slamf6|30925|SLAM family member 6	AB196811|Slamf6|30925|SLAM family member 6	AB196836|Slamf6|30925|SLAM family member 6	EU591721|Slamf6|30925|SLAM family member 6
mm9_v1_chr11_+_82988687_82988701	19.3533	FOX{I1,J2}.p2	BC044865|Slfn4|20558|schlafen 4	NM_011410|Slfn4|20558|schlafen 4	AK137559|Slfn4|20558|schlafen 4	AK137689|Slfn4|20558|schlafen 4
mm9_v1_chr11_+_106612525_106612642	19.3075	FOX{I1,J2}.p2	BC139224|Gm885|380732|predicted gene 885	BC139225|Gm885|380732|predicted gene 885	BC145580|Gm885|380732|predicted gene 885	BC145582|Gm885|380732|predicted gene 885	AK169925|Gm885|380732|predicted gene 885	AB542953|Gm885|380732|predicted gene 885	AK136488|Gm885|380732|predicted gene 885	AK137500|Gm885|380732|predicted gene 885	AK171381|Gm885|380732|predicted gene 885	NM_001033435|Gm885|380732|predicted gene 885	AK151814|Gm885|380732|predicted gene 885	AK170947|Gm885|380732|predicted gene 885	AK153506|Gm885|380732|predicted gene 885
mm9_v1_chr2_-_3283840_3283862	19.2796	FOX{I1,J2}.p2	BC025001|Olah|99035|oleoyl-ACP hydrolase	NM_145921|Olah|99035|oleoyl-ACP hydrolase	AK087571|Olah|99035|oleoyl-ACP hydrolase
mm9_v1_chr19_-_41289262_41289457	18.9523	FOX{I1,J2}.p2	AK008994|Tm9sf3|107358|transmembrane 9 superfamily member 3	AK159802|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr5_-_65351226_65351309	18.4584	FOX{I1,J2}.p2	AK137502|Tlr6|21899|toll-like receptor 6	NM_011604|Tlr6|21899|toll-like receptor 6	BC055366|Tlr6|21899|toll-like receptor 6	AK154253|Tlr6|21899|toll-like receptor 6
mm9_v1_chr1_-_55044032_55044295	18.3797	FOX{I1,J2}.p2	AK077993|Sf3b1|81898|splicing factor 3b, subunit 1	AK087700|Sf3b1|81898|splicing factor 3b, subunit 1
mm9_v1_chr5_+_115373246_115373254	17.8774	FOX{I1,J2}.p2	AK078690|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1	NM_145209|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1
mm9_v1_chr15_-_103085703_103085858	17.7899	FOX{I1,J2}.p2	BC062171|Nfe2|18022|nuclear factor, erythroid derived 2	NM_008685|Nfe2|18022|nuclear factor, erythroid derived 2	L09600|Nfe2|18022|nuclear factor, erythroid derived 2
mm9_v1_chr17_+_37407160_37407208	17.6074	FOX{I1,J2}.p2	NM_013819|H2-M3|14991|histocompatibility 2, M region locus 3	BC031984|H2-M3|14991|histocompatibility 2, M region locus 3	U18797|H2-M3|14991|histocompatibility 2, M region locus 3
mm9_v1_chr8_-_124948837_124948876	17.3252	FOX{I1,J2}.p2	
mm9_v1_chr12_-_27141277_27141301	17.2721	FOX{I1,J2}.p2	AF442152|Rsad2|58185|radical S-adenosyl methionine domain containing 2	CT010378|Rsad2|58185|radical S-adenosyl methionine domain containing 2	BC057868|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AF236064|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152600|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK010906|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK036373|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150406|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150616|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150835|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151185|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151286|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151331|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151339|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151412|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151538|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151770|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151825|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151833|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151846|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151909|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151940|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152050|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152075|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152235|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152310|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152354|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152631|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152796|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152861|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152880|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152962|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153077|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153078|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153306|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153350|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK159147|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150812|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151906|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152493|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152601|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK149900|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150069|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150347|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150425|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150525|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150536|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150684|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150731|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150767|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150783|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK150788|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151140|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151191|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151206|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151308|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151389|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151410|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151414|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151476|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151502|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151767|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151954|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK151971|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152065|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152239|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152241|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152644|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152664|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152701|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152895|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK152934|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153003|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153024|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153232|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153234|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153318|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153324|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153453|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153556|Rsad2|58185|radical S-adenosyl methionine domain containing 2	AK153062|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chr2_-_148263617_148263709	17.1796	FOX{I1,J2}.p2	AK161779|Cd93|17064|CD93 antigen	AK150385|Cd93|17064|CD93 antigen
mm9_v1_chr3_-_58905678_58905742	17.04	FOX{I1,J2}.p2	AK154964|Gpr171|229323|G protein-coupled receptor 171	AK089287|Gpr171|229323|G protein-coupled receptor 171	BC024054|Gpr171|229323|G protein-coupled receptor 171	AK041381|Gpr171|229323|G protein-coupled receptor 171	AK041582|Gpr171|229323|G protein-coupled receptor 171	AK083323|Gpr171|229323|G protein-coupled receptor 171	AK089252|Gpr171|229323|G protein-coupled receptor 171	AK154725|Gpr171|229323|G protein-coupled receptor 171	AK079674|Gpr171|229323|G protein-coupled receptor 171	NM_173398|Gpr171|229323|G protein-coupled receptor 171
mm9_v1_chr17_+_34442808_34442831	16.8881	FOX{I1,J2}.p2	NM_010382|H2-Eb1|14969|histocompatibility 2, class II antigen E beta
mm9_v1_chr14_+_78304045_78304240	16.8254	FOX{I1,J2}.p2	AK136055|Epsti1|108670|epithelial stromal interaction 1 (breast)	NM_029495|Epsti1|108670|epithelial stromal interaction 1 (breast)	NM_178825|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK135710|Epsti1|108670|epithelial stromal interaction 1 (breast)	AY239224|Epsti1|108670|epithelial stromal interaction 1 (breast)	BC021821|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK077376|Epsti1|108670|epithelial stromal interaction 1 (breast)	BC020120|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK017174|Epsti1|108670|epithelial stromal interaction 1 (breast)	AY239223|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK030289|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK077223|Epsti1|108670|epithelial stromal interaction 1 (breast)
mm9_v1_chr19_+_3935169_3935313	16.5097	FOX{I1,J2}.p2	NM_001161428|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	NM_019449|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	BC018388|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK030488|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK039526|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK165060|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK155556|Unc93b1|54445|unc-93 homolog B1 (C. elegans)	AK162535|Unc93b1|54445|unc-93 homolog B1 (C. elegans)
mm9_v1_chr6_-_122560002_122560015	16.2246	FOX{I1,J2}.p2	BC103565|Gdf3|14562|growth differentiation factor 3	BC101963|Gdf3|14562|growth differentiation factor 3	BC101964|Gdf3|14562|growth differentiation factor 3	BC101965|Gdf3|14562|growth differentiation factor 3	AK082877|Gdf3|14562|growth differentiation factor 3	AK146174|Gdf3|14562|growth differentiation factor 3	AK167962|Gdf3|14562|growth differentiation factor 3
mm9_v1_chr19_+_36453556_36453595	16.2095	FOX{I1,J2}.p2	AK017984|Pcgf5|76073|polycomb group ring finger 5	NM_029508|Pcgf5|76073|polycomb group ring finger 5	BC139258|Pcgf5|76073|polycomb group ring finger 5	BC139259|Pcgf5|76073|polycomb group ring finger 5	BC145590|Pcgf5|76073|polycomb group ring finger 5	BC145591|Pcgf5|76073|polycomb group ring finger 5
mm9_v1_chr17_+_6910178_6910178	16.1455	FOX{I1,J2}.p2	NM_183368|Sytl3|83672|synaptotagmin-like 3
mm9_v1_chr17_+_48594225_48594270	16.1029	FOX{I1,J2}.p2	AK144925|Unc5cl|76589|unc-5 homolog C (C. elegans)-like	NM_152823|Unc5cl|76589|unc-5 homolog C (C. elegans)-like	BC095959|Unc5cl|76589|unc-5 homolog C (C. elegans)-like
mm9_v1_chr6_-_122560022_122560104	15.9072	FOX{I1,J2}.p2	S52658|Gdf3|14562|growth differentiation factor 3	AK160533|Gdf3|14562|growth differentiation factor 3	AK152457|Gdf3|14562|growth differentiation factor 3	NM_008108|Gdf3|14562|growth differentiation factor 3	L06443|Gdf3|14562|growth differentiation factor 3
mm9_v1_chr11_-_83388330_83388380	15.498	FOX{I1,J2}.p2	AK151953|Ccl9|20308|chemokine (C-C motif) ligand 9
mm9_v1_chr16_-_4679664_4679776	15.3482	FOX{I1,J2}.p2	AK143624|Coro7|78885|coronin 7	AK018739|Coro7|78885|coronin 7	AK088155|Coro7|78885|coronin 7	AK041000|Coro7|78885|coronin 7	AK037894|Coro7|78885|coronin 7	BC061006|Coro7|78885|coronin 7	NM_030205|Coro7|78885|coronin 7	AK040408|Coro7|78885|coronin 7	AK150051|Coro7|78885|coronin 7	AK039585|Coro7|78885|coronin 7
mm9_v1_chr4_+_125806078_125806220	15.2997	FOX{I1,J2}.p2	AK050808|Stk40|74178|serine/threonine kinase 40
mm9_v1_chr11_+_58680717_58680792	15.2625	FOX{I1,J2}.p2	AK030099|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene	AK134479|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene	BC058081|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene	NM_172403|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene
mm9_v1_chr1_+_155596555_155596633	14.7966	FOX{I1,J2}.p2	AK140815|Rnasel|24014|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)	NM_011882|Rnasel|24014|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)	BC003873|Rnasel|24014|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
mm9_v1_chr6_+_54839147_54839273	14.7723	FOX{I1,J2}.p2	AK078666|Znrf2|387524|zinc and ring finger 2
mm9_v1_chr7_-_148452299_148452324	14.6246	FOX{I1,J2}.p2	NM_016850|Irf7|54123|interferon regulatory factor 7	U73037|Irf7|54123|interferon regulatory factor 7	AK004349|Irf7|54123|interferon regulatory factor 7	AK150608|Irf7|54123|interferon regulatory factor 7	AK158378|Irf7|54123|interferon regulatory factor 7	AK158403|Irf7|54123|interferon regulatory factor 7	AK089869|Irf7|54123|interferon regulatory factor 7	AK002830|Irf7|54123|interferon regulatory factor 7	AK079685|Irf7|54123|interferon regulatory factor 7	AK150403|Irf7|54123|interferon regulatory factor 7	AK151470|Irf7|54123|interferon regulatory factor 7	AK152401|Irf7|54123|interferon regulatory factor 7	AK152403|Irf7|54123|interferon regulatory factor 7	AK153054|Irf7|54123|interferon regulatory factor 7	AK155950|Irf7|54123|interferon regulatory factor 7	AK159142|Irf7|54123|interferon regulatory factor 7	AK159883|Irf7|54123|interferon regulatory factor 7
mm9_v1_chr8_+_90812964_90813045	14.5547	FOX{I1,J2}.p2	NM_001037723|Adcy7|11513|adenylate cyclase 7	AK154262|Adcy7|11513|adenylate cyclase 7	AK138911|Adcy7|11513|adenylate cyclase 7
mm9_v1_chr2_-_26314921_26314925	14.1866	FOX{I1,J2}.p2	AK079454|Notch1|18128|Notch gene homolog 1 (Drosophila)
mm9_v1_chr14_+_79915429_79915530	14.0168	FOX{I1,J2}.p2	AK132456|Elf1|13709|E74-like factor 1	U19617|Elf1|13709|E74-like factor 1	AK156098|Elf1|13709|E74-like factor 1	BC037743|Elf1|13709|E74-like factor 1	BC027532|Elf1|13709|E74-like factor 1	BC053914|Elf1|13709|E74-like factor 1
mm9_v1_chr6_+_48689045_48689097	13.7071	FOX{I1,J2}.p2	NM_008376|Gimap1|16205|GTPase, IMAP family member 1	NM_175860|Gimap1|16205|GTPase, IMAP family member 1	AK156732|Gimap1|16205|GTPase, IMAP family member 1	BC132601|Gimap1|16205|GTPase, IMAP family member 1	BC132603|Gimap1|16205|GTPase, IMAP family member 1	AK169133|Gimap1|16205|GTPase, IMAP family member 1
mm9_v1_chr19_+_29441927_29441979	13.4284	FOX{I1,J2}.p2	NM_021893|Cd274|60533|CD274 antigen	BC066841|Cd274|60533|CD274 antigen	AK080003|Cd274|60533|CD274 antigen	AK154403|Cd274|60533|CD274 antigen	AK089307|Cd274|60533|CD274 antigen
mm9_v1_chr10_-_18731766_18731781	13.3649	FOX{I1,J2}.p2	AK171326|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	AK172529|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3	NM_001166402|Tnfaip3|21929|tumor necrosis factor, alpha-induced protein 3
mm9_v1_chr19_+_12535536_12535672	13.2649	FOX{I1,J2}.p2	L20315|Mpeg1|17476|macrophage expressed gene 1	BC129843|Mpeg1|17476|macrophage expressed gene 1	BC129844|Mpeg1|17476|macrophage expressed gene 1
mm9_v1_chr17_+_5343877_5344040	13.1641	FOX{I1,J2}.p2	AK049919|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK021005|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK048918|Arid1b|239985|AT rich interactive domain 1B (SWI-like)
mm9_v1_chr10_+_75052084_75052401	13.119	FOX{I1,J2}.p2	AK140308|Ggt5|23887|gamma-glutamyltransferase 5	AK049084|Ggt5|23887|gamma-glutamyltransferase 5	AK052183|Ggt5|23887|gamma-glutamyltransferase 5	BC089585|Ggt5|23887|gamma-glutamyltransferase 5	NM_011820|Ggt5|23887|gamma-glutamyltransferase 5	AK085788|Ggt5|23887|gamma-glutamyltransferase 5	AF077765|Ggt5|23887|gamma-glutamyltransferase 5	AK170326|Ggt5|23887|gamma-glutamyltransferase 5	BC051971|Ggt5|23887|gamma-glutamyltransferase 5	BC113775|Ggt5|23887|gamma-glutamyltransferase 5
mm9_v1_chr5_-_134705423_134705497	12.9218	FOX{I1,J2}.p2	L11455|Ncf1|17969|neutrophil cytosolic factor 1	BC055836|Ncf1|17969|neutrophil cytosolic factor 1	AK152386|Ncf1|17969|neutrophil cytosolic factor 1	AK151593|Ncf1|17969|neutrophil cytosolic factor 1	AK149668|Ncf1|17969|neutrophil cytosolic factor 1	AK171559|Ncf1|17969|neutrophil cytosolic factor 1	AK150945|Ncf1|17969|neutrophil cytosolic factor 1	AK151316|Ncf1|17969|neutrophil cytosolic factor 1	AK152992|Ncf1|17969|neutrophil cytosolic factor 1	AK162308|Ncf1|17969|neutrophil cytosolic factor 1	AK162623|Ncf1|17969|neutrophil cytosolic factor 1	AK170462|Ncf1|17969|neutrophil cytosolic factor 1	AB002663|Ncf1|17969|neutrophil cytosolic factor 1	AK149619|Ncf1|17969|neutrophil cytosolic factor 1	AK149732|Ncf1|17969|neutrophil cytosolic factor 1	NM_010876|Ncf1|17969|neutrophil cytosolic factor 1
mm9_v1_chr7_+_73205419_73205451	12.7363	FOX{I1,J2}.p2	AK005256|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK151800|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK153502|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK152546|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AK088438|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'
mm9_v1_chr9_+_21142267_21142297	12.6947	FOX{I1,J2}.p2	AK166695|Slc44a2|68682|solute carrier family 44, member 2	AK048648|Slc44a2|68682|solute carrier family 44, member 2	BC031535|Slc44a2|68682|solute carrier family 44, member 2	NM_152808|Slc44a2|68682|solute carrier family 44, member 2
mm9_v1_chr5_+_145888588_145888809	12.5512	FOX{I1,J2}.p2	AK192837|Arpc1b|11867|actin related protein 2/3 complex, subunit 1B
mm9_v1_chr15_+_102289600_102289666	12.3045	FOX{I1,J2}.p2	NM_001170911|Prr13|66151|proline rich 13	NM_025385|Prr13|66151|proline rich 13	AK003850|Prr13|66151|proline rich 13	AK002430|Prr13|66151|proline rich 13	AK008894|Prr13|66151|proline rich 13	AK154583|Prr13|66151|proline rich 13	BC016234|Prr13|66151|proline rich 13	AK181585|Prr13|66151|proline rich 13
mm9_v1_chr2_+_163899842_163899948	12.2388	FOX{I1,J2}.p2	BC054521|Stk4|58231|serine/threonine kinase 4	AF271360|Stk4|58231|serine/threonine kinase 4	AK028838|Stk4|58231|serine/threonine kinase 4	NM_021420|Stk4|58231|serine/threonine kinase 4
mm9_v1_chr1_+_132762248_132762329	12.2232	FOX{I1,J2}.p2	BC116674|Faim3|69169|Fas apoptotic inhibitory molecule 3	BC118505|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr3_+_109376824_109376976	12.078	FOX{I1,J2}.p2	AF140280|Vav3|57257|vav 3 oncogene	NM_146139|Vav3|57257|vav 3 oncogene	AK147053|Vav3|57257|vav 3 oncogene	BC027242|Vav3|57257|vav 3 oncogene
mm9_v1_chr8_-_131589372_131589416	12.0232	FOX{I1,J2}.p2	AK015811|Ccdc7|74703|coiled-coil domain containing 7	AK016006|Ccdc7|74703|coiled-coil domain containing 7	EF100607|Ccdc7|74703|coiled-coil domain containing 7	NM_001197041|Ccdc7|74703|coiled-coil domain containing 7	NM_029061|Ccdc7|74703|coiled-coil domain containing 7	AY854152|Ccdc7|74703|coiled-coil domain containing 7
mm9_v1_chr7_-_113358823_113358853	11.8916	FOX{I1,J2}.p2	AY167973|Gvin1|74558|GTPase, very large interferon inducible 1	AY167974|Gvin1|74558|GTPase, very large interferon inducible 1	AK036418|Gvin1|74558|GTPase, very large interferon inducible 1	AY167972|Gvin1|74558|GTPase, very large interferon inducible 1	AK154796|Gvin1|74558|GTPase, very large interferon inducible 1	NM_001039160|Gvin1|74558|GTPase, very large interferon inducible 1	NM_029000|Gvin1|74558|GTPase, very large interferon inducible 1
mm9_v1_chr7_-_113102453_113102483	11.8916	FOX{I1,J2}.p2	AY167973|Gvin1|74558|GTPase, very large interferon inducible 1	AY167974|Gvin1|74558|GTPase, very large interferon inducible 1	AK036418|Gvin1|74558|GTPase, very large interferon inducible 1	AY167972|Gvin1|74558|GTPase, very large interferon inducible 1	AK154796|Gvin1|74558|GTPase, very large interferon inducible 1	NM_001039160|Gvin1|74558|GTPase, very large interferon inducible 1	NM_029000|Gvin1|74558|GTPase, very large interferon inducible 1
mm9_v1_chr19_+_12535268_12535270	11.8708	FOX{I1,J2}.p2	AK030216|Mpeg1|17476|macrophage expressed gene 1	NM_010821|Mpeg1|17476|macrophage expressed gene 1
mm9_v1_chr9_-_96378951_96379045	11.6396	FOX{I1,J2}.p2	AK007588|Rnf7|19823|ring finger protein 7	BC011127|Rnf7|19823|ring finger protein 7	AK002628|Rnf7|19823|ring finger protein 7	AK003248|Rnf7|19823|ring finger protein 7	AK003963|Rnf7|19823|ring finger protein 7	AK011328|Rnf7|19823|ring finger protein 7	AK146030|Rnf7|19823|ring finger protein 7	NM_011279|Rnf7|19823|ring finger protein 7	AF092877|Rnf7|19823|ring finger protein 7
mm9_v1_chr17_+_35189798_35189804	11.6016	FOX{I1,J2}.p2	
mm9_v1_chr5_+_104754347_104754401	11.5888	FOX{I1,J2}.p2	AF298661|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	NM_053172|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	AK158231|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	AK158330|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	AF314964|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)	BC119162|Mepe|94111|matrix extracellular phosphoglycoprotein with ASARM motif (bone)
mm9_v1_chr8_+_77972592_77972689	11.5439	FOX{I1,J2}.p2	AK005693|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene	NM_001164235|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene	NM_027944|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene	BC117767|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene	BC117768|1700007B14Rik|71831|RIKEN cDNA 1700007B14 gene
mm9_v1_chr13_-_51829951_51830128	11.5117	FOX{I1,J2}.p2	AK150911|Sema4d|20354|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D
mm9_v1_chr5_+_115373272_115373294	11.2938	FOX{I1,J2}.p2	AK150863|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1	AK165578|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1
mm9_v1_chr5_+_136559785_136559909	11.2403	FOX{I1,J2}.p2	AK154335|Rasa4|54153|RAS p21 protein activator 4	AK155146|Rasa4|54153|RAS p21 protein activator 4	NM_001039103|Rasa4|54153|RAS p21 protein activator 4	NM_133914|Rasa4|54153|RAS p21 protein activator 4	BC049381|Rasa4|54153|RAS p21 protein activator 4	AK014220|Rasa4|54153|RAS p21 protein activator 4	AK133565|Rasa4|54153|RAS p21 protein activator 4	BC027230|Rasa4|54153|RAS p21 protein activator 4	AY591339|Rasa4|54153|RAS p21 protein activator 4	DQ317932|Rasa4|54153|RAS p21 protein activator 4	AK220218|Rasa4|54153|RAS p21 protein activator 4
mm9_v1_chr10_+_127936302_127936454	11.2252	FOX{I1,J2}.p2	AK040027|A430046D13Rik|654440|Riken cDNA A430046D13 gene
mm9_v1_chr6_+_67966702_67966735	11.0933	FOX{I1,J2}.p2	
mm9_v1_chr9_-_7872896_7873169	11.0869	FOX{I1,J2}.p2	AK172636|Birc3|11796|baculoviral IAP repeat-containing 3	BC011338|Birc3|11796|baculoviral IAP repeat-containing 3	U88908|Birc3|11796|baculoviral IAP repeat-containing 3	AK162108|Birc3|11796|baculoviral IAP repeat-containing 3	NM_007464|Birc3|11796|baculoviral IAP repeat-containing 3
mm9_v1_chr19_-_60302398_60302548	10.935	FOX{I1,J2}.p2	BC061459|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK162079|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed
mm9_v1_chr13_+_52692221_52692252	10.9259	FOX{I1,J2}.p2	AK143564|Sykb|20963|spleen tyrosine kinase	NM_011518|Sykb|20963|spleen tyrosine kinase	U36776|Sykb|20963|spleen tyrosine kinase	AK136363|Sykb|20963|spleen tyrosine kinase
mm9_v1_chr7_+_73205454_73205492	10.6058	FOX{I1,J2}.p2	BC013777|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	BC029642|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'	AF230356|Snrpa1|68981|small nuclear ribonucleoprotein polypeptide A'
mm9_v1_chr8_+_35178083_35178147	10.3477	FOX{I1,J2}.p2	EU721729|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	NM_001126314|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	BC147844|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	BC147849|Mboat4|234155|membrane bound O-acyltransferase domain containing 4	EU518496|Mboat4|234155|membrane bound O-acyltransferase domain containing 4
mm9_v1_chr9_-_71011053_71011095	10.3076	FOX{I1,J2}.p2	BC024105|Aqp9|64008|aquaporin 9	AK050042|Aqp9|64008|aquaporin 9	NM_022026|Aqp9|64008|aquaporin 9
mm9_v1_chr13_+_27248667_27248686	10.286	FOX{I1,J2}.p2	AF525161|Prl3d3|215029|prolactin family 3, subfamily d, member 3	NM_172156|Prl3d3|215029|prolactin family 3, subfamily d, member 3	BC068253|Prl3d3|215029|prolactin family 3, subfamily d, member 3
mm9_v1_chr16_-_94509462_94509462	9.94036	FOX{I1,J2}.p2	BC050090|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	NM_139145|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm9_v1_chr13_-_97804287_97804316	9.91444	FOX{I1,J2}.p2	AK006488|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	BC049576|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	AK006036|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	NM_001080777|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene	NM_025585|1700029F12Rik|66479|RIKEN cDNA 1700029F12 gene
mm9_v1_chr17_+_35403998_35404048	9.90014	FOX{I1,J2}.p2	
mm9_v1_chr3_-_15426426_15426426	9.79896	FOX{I1,J2}.p2	AB112022|Sirpb1a|320832|signal-regulatory protein beta 1A	NM_001002898|Sirpb1a|320832|signal-regulatory protein beta 1A
mm9_v1_chr1_+_74200562_74200594	9.7919	FOX{I1,J2}.p2	AK158234|Cxcr2|12765|chemokine (C-X-C motif) receptor 2	NM_009909|Cxcr2|12765|chemokine (C-X-C motif) receptor 2	D17630|Cxcr2|12765|chemokine (C-X-C motif) receptor 2	BC051677|Cxcr2|12765|chemokine (C-X-C motif) receptor 2
mm9_v1_chr19_+_37624879_37624965	9.71079	FOX{I1,J2}.p2	AK151524|Exoc6|107371|exocyst complex component 6	AK151838|Exoc6|107371|exocyst complex component 6	NM_175353|Exoc6|107371|exocyst complex component 6	AK082881|Exoc6|107371|exocyst complex component 6	BC026859|Exoc6|107371|exocyst complex component 6
mm9_v1_chr10_+_126504125_126504226	9.64068	FOX{I1,J2}.p2	
mm9_v1_chr11_+_61466766_61466787	9.61402	FOX{I1,J2}.p2	AK153888|Grap|71520|GRB2-related adaptor protein
mm9_v1_chr4_-_6381171_6381368	9.60856	FOX{I1,J2}.p2	AK134518|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	BC145961|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	BC145963|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	AK147709|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor
mm9_v1_chr5_+_38651466_38651637	9.60491	FOX{I1,J2}.p2	BC025197|Tmem128|66309|transmembrane protein 128	AK012789|Tmem128|66309|transmembrane protein 128	AK013227|Tmem128|66309|transmembrane protein 128	AK080853|Tmem128|66309|transmembrane protein 128	NM_025480|Tmem128|66309|transmembrane protein 128	AK162257|Tmem128|66309|transmembrane protein 128	AK076679|Tmem128|66309|transmembrane protein 128	BC060969|Tmem128|66309|transmembrane protein 128	BC110310|Tmem128|66309|transmembrane protein 128
mm9_v1_chr5_-_31950177_31950254	9.57855	FOX{I1,J2}.p2	AK214115|Rbks|71336|ribokinase
mm9_v1_chr8_+_131591033_131591104	9.57363	FOX{I1,J2}.p2	AK005764|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	NM_001168369|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	NM_029292|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	AK076548|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene	BC147560|1700008F21Rik|75453|RIKEN cDNA 1700008F21 gene
mm9_v1_chr1_-_146024404_146024501	9.52309	FOX{I1,J2}.p2	AF498319|Rgs13|246709|regulator of G-protein signaling 13	BC049624|Rgs13|246709|regulator of G-protein signaling 13	AK043268|Rgs13|246709|regulator of G-protein signaling 13	NM_153171|Rgs13|246709|regulator of G-protein signaling 13
mm9_v1_chr9_-_32348863_32349036	9.48106	FOX{I1,J2}.p2	BC138791|Fli1|14247|Friend leukemia integration 1	BC138792|Fli1|14247|Friend leukemia integration 1	AK042111|Fli1|14247|Friend leukemia integration 1	AK154714|Fli1|14247|Friend leukemia integration 1	NM_008026|Fli1|14247|Friend leukemia integration 1	AK036655|Fli1|14247|Friend leukemia integration 1	X59421|Fli1|14247|Friend leukemia integration 1
mm9_v1_chr7_-_48755259_48755259	9.42376	FOX{I1,J2}.p2	AK164198|AW146154|101835|expressed sequence AW146154	NM_001033530|AW146154|101835|expressed sequence AW146154
mm9_v1_chr9_+_114640266_114640368	9.41334	FOX{I1,J2}.p2	AK171394|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152723|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152817|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK012941|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK150775|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK151431|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK152448|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK153092|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	NM_026036|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK170905|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159735|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167854|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK128960|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK154481|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK167499|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK030885|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK145743|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	BC027248|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK165948|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6	AK159439|Cmtm6|67213|CKLF-like MARVEL transmembrane domain containing 6
mm9_v1_chr11_-_46202942_46203016	9.36609	FOX{I1,J2}.p2	BC128374|Itk|16428|IL2-inducible T-cell kinase	BC128375|Itk|16428|IL2-inducible T-cell kinase	D14042|Itk|16428|IL2-inducible T-cell kinase	BC028478|Itk|16428|IL2-inducible T-cell kinase	AK020772|Itk|16428|IL2-inducible T-cell kinase	AK079693|Itk|16428|IL2-inducible T-cell kinase	AK153613|Itk|16428|IL2-inducible T-cell kinase	AK153692|Itk|16428|IL2-inducible T-cell kinase	L05631|Itk|16428|IL2-inducible T-cell kinase	L10628|Itk|16428|IL2-inducible T-cell kinase	AK083380|Itk|16428|IL2-inducible T-cell kinase	L00619|Itk|16428|IL2-inducible T-cell kinase	NM_010583|Itk|16428|IL2-inducible T-cell kinase
mm9_v1_chr11_-_98190774_98191090	9.23401	FOX{I1,J2}.p2	D83507|Neurod2|18013|neurogenic differentiation 2	BC058965|Neurod2|18013|neurogenic differentiation 2	NM_010895|Neurod2|18013|neurogenic differentiation 2	U58471|Neurod2|18013|neurogenic differentiation 2	AK158767|Neurod2|18013|neurogenic differentiation 2
mm9_v1_chr3_-_15748418_15748511	9.12621	FOX{I1,J2}.p2	AK036935|Sirpb1a|320832|signal-regulatory protein beta 1A	DQ055453|LOC100038947|100038947|signal-regulatory protein beta 1-like	NM_001173459|LOC100038947|100038947|signal-regulatory protein beta 1-like	AB112023|Sirpb1a|320832|signal-regulatory protein beta 1A	AK170671|Sirpb1a|320832|signal-regulatory protein beta 1A	AK054545|Sirpb1a|320832|signal-regulatory protein beta 1A	BC145417|Sirpb1a|320832|signal-regulatory protein beta 1A	BC145418|Sirpb1a|320832|signal-regulatory protein beta 1A	AB112024|Sirpb1a|320832|signal-regulatory protein beta 1A	AK040982|Sirpb1a|320832|signal-regulatory protein beta 1A	AK155731|Sirpb1a|320832|signal-regulatory protein beta 1A	AK041165|Sirpb1a|320832|signal-regulatory protein beta 1A	AB109404|Sirpb1a|320832|signal-regulatory protein beta 1A
mm9_v1_chr10_-_111434265_111434319	9.09644	FOX{I1,J2}.p2	AK137557|Glipr1|73690|GLI pathogenesis-related 1 (glioma)	AK170051|Glipr1|73690|GLI pathogenesis-related 1 (glioma)	BC098231|Glipr1|73690|GLI pathogenesis-related 1 (glioma)	NM_028608|Glipr1|73690|GLI pathogenesis-related 1 (glioma)
mm9_v1_chr17_-_34133397_34133417	9.0357	FOX{I1,J2}.p2	M13197|H2-K1|14972|histocompatibility 2, K1, K region	M23901|H2-K1|14972|histocompatibility 2, K1, K region
mm9_v1_chr15_-_9459612_9459630	8.99505	FOX{I1,J2}.p2	AK040364|Il7r|16197|interleukin 7 receptor	AK040740|Il7r|16197|interleukin 7 receptor	NM_008372|Il7r|16197|interleukin 7 receptor
mm9_v1_chr3_-_144347983_144348061	8.99198	FOX{I1,J2}.p2	
mm9_v1_chr11_+_61466797_61466853	8.99129	FOX{I1,J2}.p2	AK018457|Grap|71520|GRB2-related adaptor protein	NM_027817|Grap|71520|GRB2-related adaptor protein	BC120674|Grap|71520|GRB2-related adaptor protein	BC120676|Grap|71520|GRB2-related adaptor protein
mm9_v1_chr5_+_114580397_114580568	8.98812	FOX{I1,J2}.p2	BC011039|Ung|22256|uracil DNA glycosylase	NM_001040691|Ung|22256|uracil DNA glycosylase	Y08975|Ung|22256|uracil DNA glycosylase	AK146178|Ung|22256|uracil DNA glycosylase
mm9_v1_chr5_+_106039499_106039528	8.93642	FOX{I1,J2}.p2	AK081556|Lrrc8c|100604|leucine rich repeat containing 8 family, member C
mm9_v1_chr10_-_111434231_111434250	8.92568	FOX{I1,J2}.p2	BC025083|Glipr1|73690|GLI pathogenesis-related 1 (glioma)	AK155009|Glipr1|73690|GLI pathogenesis-related 1 (glioma)	AK010768|Glipr1|73690|GLI pathogenesis-related 1 (glioma)
mm9_v1_chr19_-_44210311_44210378	8.86719	FOX{I1,J2}.p2	BC037640|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	BC027553|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	AK012163|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	AK139654|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)	NM_001081077|Cwf19l1|72502|CWF19-like 1, cell cycle control (S. pombe)
mm9_v1_chr1_+_133535033_133535043	8.84833	FOX{I1,J2}.p2	AK145875|Ctse|13034|cathepsin E
mm9_v1_chr6_-_129225348_129225390	8.68963	FOX{I1,J2}.p2	BC139135|Cd69|12515|CD69 antigen	BC139136|Cd69|12515|CD69 antigen	BC106997|Cd69|12515|CD69 antigen	BC128272|Cd69|12515|CD69 antigen	BC128273|Cd69|12515|CD69 antigen	AK017979|Cd69|12515|CD69 antigen	AK151076|Cd69|12515|CD69 antigen	AK153224|Cd69|12515|CD69 antigen	AK171645|Cd69|12515|CD69 antigen	NM_001033122|Cd69|12515|CD69 antigen
mm9_v1_chr19_-_27463532_27463668	8.67498	FOX{I1,J2}.p2	
mm9_v1_chr4_+_128688217_128688363	8.60461	FOX{I1,J2}.p2	
mm9_v1_chr7_-_34977928_34978057	8.50595	FOX{I1,J2}.p2	BC025090|Pdcd2l|68079|programmed cell death 2-like	BC038524|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chr19_-_30623890_30624012	8.5054	FOX{I1,J2}.p2	AF030433|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	BC050189|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	NM_010051|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	AK141693|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)	AK144119|Dkk1|13380|dickkopf homolog 1 (Xenopus laevis)
mm9_v1_chr19_+_12873115_12873132	8.49377	FOX{I1,J2}.p2	BC026563|Lpxn|107321|leupaxin
mm9_v1_chr8_+_23348971_23348971	8.45309	FOX{I1,J2}.p2	AB039946|Thsd1|56229|thrombospondin, type I, domain 1	BC119603|Thsd1|56229|thrombospondin, type I, domain 1	NM_019576|Thsd1|56229|thrombospondin, type I, domain 1
mm9_v1_chr2_+_153956082_153956082	8.3452	FOX{I1,J2}.p2	AK006829|1700058C13Rik|73388|RIKEN cDNA 1700058C13 gene	BC049691|1700058C13Rik|73388|RIKEN cDNA 1700058C13 gene	NM_028528|1700058C13Rik|73388|RIKEN cDNA 1700058C13 gene
mm9_v1_chr6_+_100783598_100783865	8.33605	FOX{I1,J2}.p2	BC110429|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	AK082539|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	NM_182939|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	AK084169|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC112399|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC056340|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2	BC098464|Ppp4r2|232314|protein phosphatase 4, regulatory subunit 2
mm9_v1_chr17_+_87316687_87316777	8.3135	FOX{I1,J2}.p2	NM_030104|1700090G07Rik|78469|RIKEN cDNA 1700090G07 gene	AK018916|1700090G07Rik|78469|RIKEN cDNA 1700090G07 gene	BC100486|1700090G07Rik|78469|RIKEN cDNA 1700090G07 gene	AK076910|1700090G07Rik|78469|RIKEN cDNA 1700090G07 gene
mm9_v1_chr6_-_129572590_129572688	8.30844	FOX{I1,J2}.p2	AY860972|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	CT010384|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	AF039026|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	BC057147|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	AK040436|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	NM_033078|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1
mm9_v1_chr14_+_27813547_27813547	8.30229	FOX{I1,J2}.p2	NM_010420|Hesx1|15209|homeobox gene expressed in ES cells	U40720|Hesx1|15209|homeobox gene expressed in ES cells
mm9_v1_chr19_+_12873063_12873098	8.29726	FOX{I1,J2}.p2	AK039922|Lpxn|107321|leupaxin	AB071194|Lpxn|107321|leupaxin	NM_134152|Lpxn|107321|leupaxin
mm9_v1_chr9_+_123715592_123715616	8.26136	FOX{I1,J2}.p2	AF305709|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	NM_030712|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK153914|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK052901|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AF301018|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	AK137703|Cxcr6|80901|chemokine (C-X-C motif) receptor 6	BC096491|Cxcr6|80901|chemokine (C-X-C motif) receptor 6
mm9_v1_chr17_+_33102747_33102840	8.20845	FOX{I1,J2}.p2	NM_153063|Zfp472|224691|zinc finger protein 472	AK142395|Zfp472|224691|zinc finger protein 472	BC027407|Zfp472|224691|zinc finger protein 472	AY195875|Zfp472|224691|zinc finger protein 472	BC023090|Zfp472|224691|zinc finger protein 472
mm9_v1_chr5_+_115346942_115346944	8.20486	FOX{I1,J2}.p2	NM_011854|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2	AF068835|Oasl2|23962|2'-5' oligoadenylate synthetase-like 2
mm9_v1_chr4_-_149072755_149072816	8.18358	FOX{I1,J2}.p2	BC035203|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	NM_001164049|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	NM_001164050|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	NM_008840|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide
mm9_v1_chr3_-_106592919_106593066	8.14389	FOX{I1,J2}.p2	BC052905|Cd53|12508|CD53 antigen	AK160326|Cd53|12508|CD53 antigen	BC021310|Cd53|12508|CD53 antigen	AK156510|Cd53|12508|CD53 antigen	NM_007651|Cd53|12508|CD53 antigen
mm9_v1_chr1_+_109407998_109408121	8.14268	FOX{I1,J2}.p2	AK081487|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_001174170|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_011111|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	AK090049|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm9_v1_chr9_+_38525852_38525929	8.12105	FOX{I1,J2}.p2	NM_001145957|Vwa5a|67776|von Willebrand factor A domain containing 5A	NM_172767|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK161193|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK054497|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK136934|Vwa5a|67776|von Willebrand factor A domain containing 5A	AY366502|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK041397|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK019914|Vwa5a|67776|von Willebrand factor A domain containing 5A	AK053665|Vwa5a|67776|von Willebrand factor A domain containing 5A	BC065153|Vwa5a|67776|von Willebrand factor A domain containing 5A
mm9_v1_chrX_-_162948399_162948409	8.08827	FOX{I1,J2}.p2	AK140929|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	BC067008|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing	NM_001007577|Tceanc|245695|transcription elongation factor A (SII) N-terminal and central domain containing
mm9_v1_chr13_-_64230610_64230680	8.06931	FOX{I1,J2}.p2	BC107211|Slc35d2|70484|solute carrier family 35, member D2	AB117931|Slc35d2|70484|solute carrier family 35, member D2	AB117932|Slc35d2|70484|solute carrier family 35, member D2	BC107210|Slc35d2|70484|solute carrier family 35, member D2	AK159148|Slc35d2|70484|solute carrier family 35, member D2	NM_001001321|Slc35d2|70484|solute carrier family 35, member D2	AK154257|Slc35d2|70484|solute carrier family 35, member D2
mm9_v1_chrX_-_7544940_7545019	8.0659	FOX{I1,J2}.p2	NM_008089|Gata1|14460|GATA binding protein 1	X15763|Gata1|14460|GATA binding protein 1	BC052653|Gata1|14460|GATA binding protein 1	AK146915|Gata1|14460|GATA binding protein 1
mm9_v1_chrX_-_154006916_154006936	8.06154	FOX{I1,J2}.p2	AK161451|Yy2|100073351|Yy2 transcription factor	NM_001098723|Yy2|100073351|Yy2 transcription factor	AK077220|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2
mm9_v1_chr9_-_62644026_62644272	8.00918	FOX{I1,J2}.p2	AK078303|Fem1b|14155|feminization 1 homolog b (C. elegans)	AK160393|Fem1b|14155|feminization 1 homolog b (C. elegans)
mm9_v1_chr7_-_25873560_25873562	7.96455	FOX{I1,J2}.p2	
mm9_v1_chr2_-_164182009_164182029	7.96363	FOX{I1,J2}.p2	U94341|Slpi|20568|secretory leukocyte peptidase inhibitor	U88093|Slpi|20568|secretory leukocyte peptidase inhibitor	AK010170|Slpi|20568|secretory leukocyte peptidase inhibitor
mm9_v1_chr4_-_149075697_149075737	7.86745	FOX{I1,J2}.p2	AK040867|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	AK153304|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	AK155835|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	AK169494|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide	NM_001029837|Pik3cd|18707|phosphatidylinositol 3-kinase catalytic delta polypeptide
mm9_v1_chr2_+_32583221_32583245	7.83895	FOX{I1,J2}.p2	AK042709|Sh2d3c|27387|SH2 domain containing 3C	AK085885|Sh2d3c|27387|SH2 domain containing 3C	AK135231|Sh2d3c|27387|SH2 domain containing 3C	AB030442|Sh2d3c|27387|SH2 domain containing 3C
mm9_v1_chr11_+_53164267_53164268	7.79445	FOX{I1,J2}.p2	NM_033565|Aff4|93736|AF4/FMR2 family, member 4
mm9_v1_chr12_+_75028976_75029036	7.78297	FOX{I1,J2}.p2	AK076395|Hif1a|15251|hypoxia inducible factor 1, alpha subunit
mm9_v1_chr7_-_16807341_16807387	7.78144	FOX{I1,J2}.p2	BC080856|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK129062|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	AK004733|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34	NM_027883|Dhx34|71723|DEAH (Asp-Glu-Ala-His) box polypeptide 34
mm9_v1_chr16_+_44811858_44811936	7.65703	FOX{I1,J2}.p2	AK089262|Cd200r4|239849|CD200 receptor 4
mm9_v1_chr6_-_118089060_118089172	7.60318	FOX{I1,J2}.p2	AK028045|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	AK145992|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	AK160867|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	AK019496|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2	NM_030165|Csgalnact2|78752|chondroitin sulfate N-acetylgalactosaminyltransferase 2
mm9_v1_chr2_-_118554094_118554175	7.58148	FOX{I1,J2}.p2	BC145249|Plcb2|18796|phospholipase C, beta 2	AK045469|Plcb2|18796|phospholipase C, beta 2	NM_177568|Plcb2|18796|phospholipase C, beta 2
mm9_v1_chr16_+_59471600_59471691	7.54845	FOX{I1,J2}.p2	NM_025910|Mina|67014|myc induced nuclear antigen	AK007810|Mina|67014|myc induced nuclear antigen	AK032595|Mina|67014|myc induced nuclear antigen	AK013451|Mina|67014|myc induced nuclear antigen	AK014426|Mina|67014|myc induced nuclear antigen	AK019117|Mina|67014|myc induced nuclear antigen	AK031671|Mina|67014|myc induced nuclear antigen	BC025109|Mina|67014|myc induced nuclear antigen	BC058242|Mina|67014|myc induced nuclear antigen
mm9_v1_chr11_-_99855307_99855307	7.4638	FOX{I1,J2}.p2	AK020698|Krtap17-1|77914|keratin associated protein 17-1	NM_001099774|Krtap17-1|77914|keratin associated protein 17-1
mm9_v1_chr1_+_52687548_52687638	7.3958	FOX{I1,J2}.p2	NM_001142647|Tmem194b|227094|transmembrane protein 194B	AK030361|Tmem194b|227094|transmembrane protein 194B	AK036693|Tmem194b|227094|transmembrane protein 194B	AK048484|Tmem194b|227094|transmembrane protein 194B	AK170577|Tmem194b|227094|transmembrane protein 194B	AK086801|Tmem194b|227094|transmembrane protein 194B
mm9_v1_chr9_+_43552516_43552726	7.3939	FOX{I1,J2}.p2	BC060694|Pvrl1|58235|poliovirus receptor-related 1	NM_021424|Pvrl1|58235|poliovirus receptor-related 1	AF297665|Pvrl1|58235|poliovirus receptor-related 1	AF239762|Pvrl1|58235|poliovirus receptor-related 1	AF270977|Pvrl1|58235|poliovirus receptor-related 1
mm9_v1_chr7_+_134439888_134439975	7.34531	FOX{I1,J2}.p2	AK155566|Itgal|16408|integrin alpha L	AK171389|Itgal|16408|integrin alpha L	M60778|Itgal|16408|integrin alpha L	BC145094|Itgal|16408|integrin alpha L	BC145095|Itgal|16408|integrin alpha L	BC145096|Itgal|16408|integrin alpha L	BC145802|Itgal|16408|integrin alpha L	AF065901|Itgal|16408|integrin alpha L	AF065902|Itgal|16408|integrin alpha L	AK152913|Itgal|16408|integrin alpha L
mm9_v1_chrX_+_156411885_156411895	7.34028	FOX{I1,J2}.p2	AK200438|Sh3kbp1|58194|SH3-domain kinase binding protein 1
mm9_v1_chr17_+_37006518_37006546	7.3263	FOX{I1,J2}.p2	NM_011280|Trim10|19824|tripartite motif-containing 10	AK011082|Trim10|19824|tripartite motif-containing 10	AF134811|Trim10|19824|tripartite motif-containing 10	BC051632|Trim10|19824|tripartite motif-containing 10	AF220121|Trim10|19824|tripartite motif-containing 10
mm9_v1_chr2_-_91019477_91019477	7.312	FOX{I1,J2}.p2	NM_001177720|Madd|228355|MAP-kinase activating death domain
mm9_v1_chr13_+_95335701_95335710	7.27378	FOX{I1,J2}.p2	
mm9_v1_chr1_-_80661844_80661858	7.25623	FOX{I1,J2}.p2	BC150753|Dock10|210293|dedicator of cytokinesis 10
mm9_v1_chr12_+_72149332_72149349	7.25233	FOX{I1,J2}.p2	AK149171|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)
mm9_v1_chr9_-_88626434_88626600	7.19734	FOX{I1,J2}.p2	AK165576|Bcl2a1d|12047|B-cell leukemia/lymphoma 2 related protein A1d	BC027536|Bcl2a1d|12047|B-cell leukemia/lymphoma 2 related protein A1d
mm9_v1_chr16_+_91465283_91465348	7.17347	FOX{I1,J2}.p2	AK162627|A930006K02Rik|78433|RIKEN cDNA A930006K02 gene	AK038602|A930006K02Rik|78433|RIKEN cDNA A930006K02 gene
mm9_v1_chr2_-_60589953_60589966	7.17197	FOX{I1,J2}.p2	AK143579|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK169352|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr5_-_65323937_65324139	7.17161	FOX{I1,J2}.p2	AY009154|Tlr1|21897|toll-like receptor 1	NM_030682|Tlr1|21897|toll-like receptor 1	BC141319|Tlr1|21897|toll-like receptor 1	BC141321|Tlr1|21897|toll-like receptor 1
mm9_v1_chr13_-_53472732_53472776	7.16611	FOX{I1,J2}.p2	AK084391|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AF003823|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK089030|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK053207|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK028713|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK161140|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1
mm9_v1_chr6_+_83293025_83293050	7.14505	FOX{I1,J2}.p2	BC011285|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)
mm9_v1_chr14_+_21520038_21520084	7.08961	FOX{I1,J2}.p2	
mm9_v1_chr1_-_173579128_173579145	7.0444	FOX{I1,J2}.p2	AK040678|Slamf7|75345|SLAM family member 7	AK089525|Slamf7|75345|SLAM family member 7
mm9_v1_chr6_-_115685120_115685120	7.0442	FOX{I1,J2}.p2	NM_001168258|Tmem40|94346|transmembrane protein 40
mm9_v1_chr9_-_14185399_14185474	6.98495	FOX{I1,J2}.p2	BC096490|Endod1|71946|endonuclease domain containing 1	AK079741|Endod1|71946|endonuclease domain containing 1	AK078056|Endod1|71946|endonuclease domain containing 1	BC019813|Endod1|71946|endonuclease domain containing 1	AK086102|Endod1|71946|endonuclease domain containing 1
mm9_v1_chr2_-_154196611_154196692	6.96968	FOX{I1,J2}.p2	BC025132|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1
mm9_v1_chr1_+_161974815_161974830	6.96752	FOX{I1,J2}.p2	AK034159|4930523C07Rik|67647|RIKEN cDNA 4930523C07 gene
mm9_v1_chrX_+_70437517_70437560	6.94456	FOX{I1,J2}.p2	NM_001081643|Xlr3b|574437|X-linked lymphocyte-regulated 3B	BC057003|Xlr3b|574437|X-linked lymphocyte-regulated 3B	AK146398|Xlr3b|574437|X-linked lymphocyte-regulated 3B	BC038862|Xlr3b|574437|X-linked lymphocyte-regulated 3B	BC064787|Xlr3b|574437|X-linked lymphocyte-regulated 3B
mm9_v1_chr17_+_22498419_22498488	6.94364	FOX{I1,J2}.p2	NM_145484|Zfp758|224598|zinc finger protein 758	BC037455|Zfp758|224598|zinc finger protein 758	AK028301|Zfp758|224598|zinc finger protein 758	BC022203|Zfp758|224598|zinc finger protein 758	BC056632|Zfp758|224598|zinc finger protein 758	BC021442|Zfp758|224598|zinc finger protein 758
mm9_v1_chr3_+_95466898_95466910	6.91788	FOX{I1,J2}.p2	
mm9_v1_chr18_-_32719516_32719687	6.89013	FOX{I1,J2}.p2	AK002769|Gypc|71683|glycophorin C	AK082930|Gypc|71683|glycophorin C	AK152607|Gypc|71683|glycophorin C	AK159730|Gypc|71683|glycophorin C	BC027408|Gypc|71683|glycophorin C	AK089652|Gypc|71683|glycophorin C	AY234183|Gypc|71683|glycophorin C	NM_001048207|Gypc|71683|glycophorin C
mm9_v1_chr10_+_96079634_96079769	6.86408	FOX{I1,J2}.p2	NM_007569|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK162764|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK149547|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC018309|Btg1|12226|B-cell translocation gene 1, anti-proliferative	L16846|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC006834|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK181728|Btg1|12226|B-cell translocation gene 1, anti-proliferative
mm9_v1_chr1_-_173579057_173579105	6.86315	FOX{I1,J2}.p2	AB196816|Slamf7|75345|SLAM family member 7	AB196817|Slamf7|75345|SLAM family member 7	AB196818|Slamf7|75345|SLAM family member 7	AB196819|Slamf7|75345|SLAM family member 7	AB196837|Slamf7|75345|SLAM family member 7	AF467909|Slamf7|75345|SLAM family member 7	AF467910|Slamf7|75345|SLAM family member 7	AF467911|Slamf7|75345|SLAM family member 7	BC011154|Slamf7|75345|SLAM family member 7	AK172665|Slamf7|75345|SLAM family member 7
mm9_v1_chr6_+_83065466_83065564	6.83313	FOX{I1,J2}.p2	AK144946|Mogs|57377|mannosyl-oligosaccharide glucosidase	BC051949|Mogs|57377|mannosyl-oligosaccharide glucosidase	NM_020619|Mogs|57377|mannosyl-oligosaccharide glucosidase	AK157286|Mogs|57377|mannosyl-oligosaccharide glucosidase
mm9_v1_chr1_+_132762353_132762436	6.83043	FOX{I1,J2}.p2	AK007714|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK155943|Faim3|69169|Fas apoptotic inhibitory molecule 3	NM_026976|Faim3|69169|Fas apoptotic inhibitory molecule 3	AK156523|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227385|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227386|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227387|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227388|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227389|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227390|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227391|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227392|Faim3|69169|Fas apoptotic inhibitory molecule 3	AY227393|Faim3|69169|Fas apoptotic inhibitory molecule 3
mm9_v1_chr6_+_53523365_53523387	6.81624	FOX{I1,J2}.p2	AK052230|Creb5|231991|cAMP responsive element binding protein 5	AK052451|Creb5|231991|cAMP responsive element binding protein 5	AK154148|Creb5|231991|cAMP responsive element binding protein 5	NM_172728|Creb5|231991|cAMP responsive element binding protein 5	AK170128|Creb5|231991|cAMP responsive element binding protein 5	AK155537|Creb5|231991|cAMP responsive element binding protein 5	BC098487|Creb5|231991|cAMP responsive element binding protein 5
mm9_v1_chr5_+_137170046_137170046	6.80769	FOX{I1,J2}.p2	NM_001085387|Myl10|59310|myosin, light chain 10, regulatory	X65979|Myl10|59310|myosin, light chain 10, regulatory
mm9_v1_chr17_-_50329593_50329893	6.72016	FOX{I1,J2}.p2	AK087803|Rftn1|76438|raftlin lipid raft linker 1	AK152130|Rftn1|76438|raftlin lipid raft linker 1	AK153288|Rftn1|76438|raftlin lipid raft linker 1	AK172884|Rftn1|76438|raftlin lipid raft linker 1	AK155870|Rftn1|76438|raftlin lipid raft linker 1	AK170913|Rftn1|76438|raftlin lipid raft linker 1	BC052074|Rftn1|76438|raftlin lipid raft linker 1	NM_181397|Rftn1|76438|raftlin lipid raft linker 1
mm9_v1_chr17_-_51878720_51878731	6.70901	FOX{I1,J2}.p2	AK081385|Satb1|20230|special AT-rich sequence binding protein 1
mm9_v1_chr2_+_132516018_132516018	6.69746	FOX{I1,J2}.p2	BC100475|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene	NM_028637|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene
mm9_v1_chr12_+_82049290_82049329	6.6906	FOX{I1,J2}.p2	AK135336|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr9_-_14185685_14185685	6.68364	FOX{I1,J2}.p2	AK173036|Endod1|71946|endonuclease domain containing 1	NM_028013|Endod1|71946|endonuclease domain containing 1
mm9_v1_chr1_-_173537404_173537546	6.68242	FOX{I1,J2}.p2	M84412|Ly9|17085|lymphocyte antigen 9	BC055380|Ly9|17085|lymphocyte antigen 9	BC066212|Ly9|17085|lymphocyte antigen 9	AB196804|Ly9|17085|lymphocyte antigen 9	AB196805|Ly9|17085|lymphocyte antigen 9	AB196806|Ly9|17085|lymphocyte antigen 9	AB196807|Ly9|17085|lymphocyte antigen 9	AK087345|Ly9|17085|lymphocyte antigen 9	BC095921|Ly9|17085|lymphocyte antigen 9	AK134106|Ly9|17085|lymphocyte antigen 9	AK150121|Ly9|17085|lymphocyte antigen 9	AK042288|Ly9|17085|lymphocyte antigen 9	AK088815|Ly9|17085|lymphocyte antigen 9	AK040306|Ly9|17085|lymphocyte antigen 9	NM_008534|Ly9|17085|lymphocyte antigen 9	AF244130|Ly9|17085|lymphocyte antigen 9	AF244131|Ly9|17085|lymphocyte antigen 9
mm9_v1_chr13_-_53472719_53472729	6.63227	FOX{I1,J2}.p2	AK084445|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	X95641|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK079578|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	BC046323|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	NM_009269|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1
mm9_v1_chr19_-_41289045_41289143	6.59319	FOX{I1,J2}.p2	AK004050|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr9_+_7792286_7792314	6.56648	FOX{I1,J2}.p2	AK150630|Tmem123|71929|transmembrane protein 123
mm9_v1_chr17_+_35404109_35404141	6.56613	FOX{I1,J2}.p2	
mm9_v1_chr4_+_134483092_134483164	6.55538	FOX{I1,J2}.p2	
mm9_v1_chr9_-_71743854_71743929	6.53217	FOX{I1,J2}.p2	AK135376|Tcf12|21406|transcription factor 12	AK132002|Tcf12|21406|transcription factor 12	AK133958|Tcf12|21406|transcription factor 12	AK078415|Tcf12|21406|transcription factor 12
mm9_v1_chrX_+_104284572_104284678	6.51656	FOX{I1,J2}.p2	AK038124|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK041351|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	AK088234|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	NM_172435|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10	BC053707|P2ry10|78826|purinergic receptor P2Y, G-protein coupled 10
mm9_v1_chr9_-_21767872_21768019	6.49287	FOX{I1,J2}.p2	BC003953|Epor|13857|erythropoietin receptor	J04843|Epor|13857|erythropoietin receptor	AK139031|Epor|13857|erythropoietin receptor	BC046282|Epor|13857|erythropoietin receptor	NM_010149|Epor|13857|erythropoietin receptor
mm9_v1_chr4_-_43666412_43666469	6.47729	FOX{I1,J2}.p2	AK132968|Spag8|433700|sperm associated antigen 8	AY769082|Spag8|433700|sperm associated antigen 8	NM_001007463|Spag8|433700|sperm associated antigen 8	BC150868|Spag8|433700|sperm associated antigen 8
mm9_v1_chr17_+_28667805_28667828	6.47402	FOX{I1,J2}.p2	AK015756|4930511I11Rik|67645|RIKEN cDNA 4930511I11 gene	NM_026290|4930511I11Rik|67645|RIKEN cDNA 4930511I11 gene	BC049559|4930511I11Rik|67645|RIKEN cDNA 4930511I11 gene	AK005672|4930511I11Rik|67645|RIKEN cDNA 4930511I11 gene	EU477370|4930511I11Rik|67645|RIKEN cDNA 4930511I11 gene
mm9_v1_chr5_+_30969259_30969346	6.42319	FOX{I1,J2}.p2	AF012709|Cenpa|12615|centromere protein A	NM_007681|Cenpa|12615|centromere protein A	AK040313|Cenpa|12615|centromere protein A	AK041138|Cenpa|12615|centromere protein A	AK089033|Cenpa|12615|centromere protein A	AK053763|Cenpa|12615|centromere protein A	AK010718|Cenpa|12615|centromere protein A	BC011038|Cenpa|12615|centromere protein A	AK011399|Cenpa|12615|centromere protein A	BC012280|Cenpa|12615|centromere protein A
mm9_v1_chr6_-_52190771_52190869	6.40308	FOX{I1,J2}.p2	L08758|Hoxa10|15395|homeobox A10	NM_001122950|Hoxa10|15395|homeobox A10
mm9_v1_chr6_-_114871769_114871855	6.36006	FOX{I1,J2}.p2	BC048841|Vgll4|232334|vestigial like 4 (Drosophila)	NM_177683|Vgll4|232334|vestigial like 4 (Drosophila)	BC060305|Vgll4|232334|vestigial like 4 (Drosophila)	AK144447|Vgll4|232334|vestigial like 4 (Drosophila)	AK078466|Vgll4|232334|vestigial like 4 (Drosophila)
mm9_v1_chr6_-_123239765_123239846	6.35568	FOX{I1,J2}.p2	CT010223|Clec4e|56619|C-type lectin domain family 4, member e	AK170698|Clec4e|56619|C-type lectin domain family 4, member e	BC003218|Clec4e|56619|C-type lectin domain family 4, member e
mm9_v1_chr15_+_6529846_6529910	6.32002	FOX{I1,J2}.p2	AK037454|Fyb|23880|FYN binding protein	AK038225|Fyb|23880|FYN binding protein	NM_011815|Fyb|23880|FYN binding protein	AF001863|Fyb|23880|FYN binding protein	AF061744|Fyb|23880|FYN binding protein	AK030905|Fyb|23880|FYN binding protein	AK172013|Fyb|23880|FYN binding protein	AK137907|Fyb|23880|FYN binding protein	BC141352|Fyb|23880|FYN binding protein	BC064102|Fyb|23880|FYN binding protein
mm9_v1_chr2_-_51828671_51828727	6.25413	FOX{I1,J2}.p2	NM_001141948|Nmi|64685|N-myc (and STAT) interactor	NM_001141949|Nmi|64685|N-myc (and STAT) interactor	NM_019401|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr19_-_60302571_60302605	6.24811	FOX{I1,J2}.p2	BC056640|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK011404|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK044853|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK075914|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	NM_029648|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	BC048505|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed
mm9_v1_chr17_-_36169573_36169660	6.23985	FOX{I1,J2}.p2	AF100699|H2-T23|15040|histocompatibility 2, T region locus 23	AF100700|H2-T23|15040|histocompatibility 2, T region locus 23	AF100702|H2-T23|15040|histocompatibility 2, T region locus 23	AF057279|H2-T23|15040|histocompatibility 2, T region locus 23	AF082510|H2-T23|15040|histocompatibility 2, T region locus 23	BC099472|H2-T23|15040|histocompatibility 2, T region locus 23	AB359230|H2-T23|15040|histocompatibility 2, T region locus 23	AK133502|H2-T23|15040|histocompatibility 2, T region locus 23	M11284|H2-T23|15040|histocompatibility 2, T region locus 23	NM_010398|H2-T23|15040|histocompatibility 2, T region locus 23
mm9_v1_chr7_-_148202806_148202810	6.23595	FOX{I1,J2}.p2	AK039626|Ifitm6|213002|interferon induced transmembrane protein 6
mm9_v1_chr6_+_48563178_48563183	6.17389	FOX{I1,J2}.p2	AK048054|Zfp775|243372|zinc finger protein 775	NM_173429|Zfp775|243372|zinc finger protein 775
mm9_v1_chr5_-_86539474_86539529	6.15595	FOX{I1,J2}.p2	AK017687|Uba6|231380|ubiquitin-like modifier activating enzyme 6
mm9_v1_chr12_+_114727721_114727775	6.15439	FOX{I1,J2}.p2	AK029742|Adam6b|238405|a disintegrin and metallopeptidase domain 6B	AK076580|Adam6b|238405|a disintegrin and metallopeptidase domain 6B	BC111877|Adam6b|238405|a disintegrin and metallopeptidase domain 6B	NM_001009545|Adam6b|238405|a disintegrin and metallopeptidase domain 6B
mm9_v1_chr11_-_79337178_79337240	6.1512	FOX{I1,J2}.p2	AK171686|Evi2b|216984|ecotropic viral integration site 2b	BC017548|Evi2b|216984|ecotropic viral integration site 2b	AK170476|Evi2b|216984|ecotropic viral integration site 2b	AK039968|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr3_+_51299646_51299685	6.13677	FOX{I1,J2}.p2	
mm9_v1_chr2_-_154198449_154198468	6.11893	FOX{I1,J2}.p2	AK010081|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK010097|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	NM_025876|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK088517|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK136570|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1
mm9_v1_chr9_+_44789868_44790000	6.08883	FOX{I1,J2}.p2	AK042172|Cd3d|12500|CD3 antigen, delta polypeptide	NM_013487|Cd3d|12500|CD3 antigen, delta polypeptide	AK050629|Cd3d|12500|CD3 antigen, delta polypeptide	AK153843|Cd3d|12500|CD3 antigen, delta polypeptide	AK154064|Cd3d|12500|CD3 antigen, delta polypeptide	BC062807|Cd3d|12500|CD3 antigen, delta polypeptide	EF382667|Cd3d|12500|CD3 antigen, delta polypeptide	HM536173|Cd3d|12500|CD3 antigen, delta polypeptide	X02339|Cd3d|12500|CD3 antigen, delta polypeptide
mm9_v1_chr11_-_99016390_99016390	6.04252	FOX{I1,J2}.p2	AK037965|Ccr7|12775|chemokine (C-C motif) receptor 7	AK154349|Ccr7|12775|chemokine (C-C motif) receptor 7	AK154736|Ccr7|12775|chemokine (C-C motif) receptor 7	AK154849|Ccr7|12775|chemokine (C-C motif) receptor 7	NM_007719|Ccr7|12775|chemokine (C-C motif) receptor 7
mm9_v1_chr17_+_34701239_34701309	6.00572	FOX{I1,J2}.p2	NM_010929|Notch4|18132|Notch gene homolog 4 (Drosophila)	AK166261|Notch4|18132|Notch gene homolog 4 (Drosophila)	AK166493|Notch4|18132|Notch gene homolog 4 (Drosophila)	M80456|Notch4|18132|Notch gene homolog 4 (Drosophila)	BC138044|Notch4|18132|Notch gene homolog 4 (Drosophila)	BC145114|Notch4|18132|Notch gene homolog 4 (Drosophila)
mm9_v1_chr9_-_66767436_66767566	5.96589	FOX{I1,J2}.p2	AB232601|Rab8b|235442|RAB8B, member RAS oncogene family	AK031251|Rab8b|235442|RAB8B, member RAS oncogene family	BC157974|Rab8b|235442|RAB8B, member RAS oncogene family	AK051218|Rab8b|235442|RAB8B, member RAS oncogene family	AK084650|Rab8b|235442|RAB8B, member RAS oncogene family	AK155621|Rab8b|235442|RAB8B, member RAS oncogene family	BC059208|Rab8b|235442|RAB8B, member RAS oncogene family	NM_173413|Rab8b|235442|RAB8B, member RAS oncogene family
mm9_v1_chr10_+_32803288_32803366	5.94192	FOX{I1,J2}.p2	NM_029726|Trdn|76757|triadin	AK009816|Trdn|76757|triadin	AF223415|Trdn|76757|triadin	AF223416|Trdn|76757|triadin	BC034343|Trdn|76757|triadin	AF223417|Trdn|76757|triadin
mm9_v1_chr6_-_97010364_97010406	5.8699	FOX{I1,J2}.p2	BC089490|Fam19a4|320701|family with sequence similarity 19, member A4	AK081531|Fam19a4|320701|family with sequence similarity 19, member A4	AK084114|Fam19a4|320701|family with sequence similarity 19, member A4	NM_177233|Fam19a4|320701|family with sequence similarity 19, member A4	AK149355|Fam19a4|320701|family with sequence similarity 19, member A4
mm9_v1_chr5_-_21371421_21371421	5.86144	FOX{I1,J2}.p2	AF529192|Slc26a5|80979|solute carrier family 26, member 5	NM_030727|Slc26a5|80979|solute carrier family 26, member 5
mm9_v1_chr1_-_166865638_166865652	5.85159	FOX{I1,J2}.p2	U15607|Xcl1|16963|chemokine (C motif) ligand 1	BC062249|Xcl1|16963|chemokine (C motif) ligand 1	D43769|Xcl1|16963|chemokine (C motif) ligand 1	NM_008510|Xcl1|16963|chemokine (C motif) ligand 1	AK079820|Xcl1|16963|chemokine (C motif) ligand 1
mm9_v1_chr5_-_94499570_94499570	5.8329	FOX{I1,J2}.p2	BC061212|BC061212|381724|cDNA sequence BC061212	NM_198667|BC061212|381724|cDNA sequence BC061212
mm9_v1_chr16_-_92605804_92605880	5.82922	FOX{I1,J2}.p2	AK153274|Runx1|12394|runt related transcription factor 1
mm9_v1_chr6_+_48634576_48634582	5.82555	FOX{I1,J2}.p2	NM_174990|Gimap4|107526|GTPase, IMAP family member 4	NM_175048|Gimap4|107526|GTPase, IMAP family member 4	AK088228|Gimap4|107526|GTPase, IMAP family member 4
mm9_v1_chr2_-_51828440_51828551	5.82174	FOX{I1,J2}.p2	BC002019|Nmi|64685|N-myc (and STAT) interactor	AK146577|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr6_-_129187965_129188001	5.80056	FOX{I1,J2}.p2	AK030376|2310001H17Rik|76432|RIKEN cDNA 2310001H17 gene	AK009064|2310001H17Rik|76432|RIKEN cDNA 2310001H17 gene
mm9_v1_chr5_-_101001191_101001194	5.79986	FOX{I1,J2}.p2	BC010789|Plac8|231507|placenta-specific 8
mm9_v1_chr11_+_83476085_83476138	5.79933	FOX{I1,J2}.p2	NM_013652|Ccl4|20303|chemokine (C-C motif) ligand 4	AK089326|Ccl4|20303|chemokine (C-C motif) ligand 4	AK154685|Ccl4|20303|chemokine (C-C motif) ligand 4	AK155053|Ccl4|20303|chemokine (C-C motif) ligand 4	M23503|Ccl4|20303|chemokine (C-C motif) ligand 4	AK156948|Ccl4|20303|chemokine (C-C motif) ligand 4	AK172472|Ccl4|20303|chemokine (C-C motif) ligand 4	M35590|Ccl4|20303|chemokine (C-C motif) ligand 4	AF128218|Ccl4|20303|chemokine (C-C motif) ligand 4	AF128219|Ccl4|20303|chemokine (C-C motif) ligand 4	BC119257|Ccl4|20303|chemokine (C-C motif) ligand 4	BC119259|Ccl4|20303|chemokine (C-C motif) ligand 4
mm9_v1_chr19_-_6932673_6932702	5.7936	FOX{I1,J2}.p2	BC151001|Ccdc88b|78317|coiled-coil domain containing 88B	BC151009|Ccdc88b|78317|coiled-coil domain containing 88B	BC157946|Ccdc88b|78317|coiled-coil domain containing 88B	NM_001081291|Ccdc88b|78317|coiled-coil domain containing 88B
mm9_v1_chr9_+_5308846_5308883	5.79183	FOX{I1,J2}.p2	AK078836|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK138730|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK151547|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	BC061255|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	NM_007609|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK156667|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK160328|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	AK171877|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	U59463|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase	Y13089|Casp4|12363|caspase 4, apoptosis-related cysteine peptidase
mm9_v1_chr3_-_105970438_105970481	5.77943	FOX{I1,J2}.p2	D87757|Chi3l3|12655|chitinase 3-like 3	M94584|Chi3l3|12655|chitinase 3-like 3	AK154420|Chi3l3|12655|chitinase 3-like 3	BC061154|Chi3l3|12655|chitinase 3-like 3	AK137503|Chi3l3|12655|chitinase 3-like 3	NM_009892|Chi3l3|12655|chitinase 3-like 3
mm9_v1_chr6_-_70868896_70868915	5.7703	FOX{I1,J2}.p2	BC049736|1700011F03Rik|74221|RIKEN cDNA 1700011F03 gene	AK005862|1700011F03Rik|74221|RIKEN cDNA 1700011F03 gene	NM_028825|1700011F03Rik|74221|RIKEN cDNA 1700011F03 gene
mm9_v1_chr2_+_92024338_92024494	5.74731	FOX{I1,J2}.p2	NM_138755|Phf21a|192285|PHD finger protein 21A	AB105178|Phf21a|192285|PHD finger protein 21A	AK089411|Phf21a|192285|PHD finger protein 21A	BC019181|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr14_-_49282546_49282546	5.72421	FOX{I1,J2}.p2	BC017609|Otx2|18424|orthodenticle homolog 2 (Drosophila)	NM_144841|Otx2|18424|orthodenticle homolog 2 (Drosophila)
mm9_v1_chr9_-_107888239_107888272	5.72291	FOX{I1,J2}.p2	NM_026597|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene
mm9_v1_chr6_+_48634586_48634593	5.72085	FOX{I1,J2}.p2	BC005577|Gimap4|107526|GTPase, IMAP family member 4
mm9_v1_chr5_-_101001209_101001243	5.7189	FOX{I1,J2}.p2	AF263458|Plac8|231507|placenta-specific 8	AK007369|Plac8|231507|placenta-specific 8	NM_139198|Plac8|231507|placenta-specific 8	AJ422151|Plac8|231507|placenta-specific 8
mm9_v1_chr1_-_127289729_127289773	5.69017	FOX{I1,J2}.p2	
mm9_v1_chr17_+_22099525_22099724	5.68425	FOX{I1,J2}.p2	AK036434|Zfp943|74670|zinc finger prtoein 943	NM_001025373|Zfp943|74670|zinc finger prtoein 943	AK015297|Zfp943|74670|zinc finger prtoein 943	BC038865|Zfp943|74670|zinc finger prtoein 943	BC066031|Zfp943|74670|zinc finger prtoein 943
mm9_v1_chr9_+_57545419_57545421	5.64024	FOX{I1,J2}.p2	NM_001136059|Cyp1a1|13076|cytochrome P450, family 1, subfamily a, polypeptide 1	Y00071|Cyp1a1|13076|cytochrome P450, family 1, subfamily a, polypeptide 1	K02588|Cyp1a1|13076|cytochrome P450, family 1, subfamily a, polypeptide 1
mm9_v1_chr13_-_24853723_24853834	5.62948	FOX{I1,J2}.p2	AF068780|Gmnn|57441|geminin	BC020061|Gmnn|57441|geminin	AK131959|Gmnn|57441|geminin	NM_020567|Gmnn|57441|geminin
mm9_v1_chr5_-_96165191_96165191	5.62578	FOX{I1,J2}.p2	BC061212|BC061212|381724|cDNA sequence BC061212	NM_198667|BC061212|381724|cDNA sequence BC061212
mm9_v1_chr2_-_87332571_87332574	5.59411	FOX{I1,J2}.p2	BC052825|Pramel7|347712|preferentially expressed antigen in melanoma like 7	AF490343|Pramel7|347712|preferentially expressed antigen in melanoma like 7	NM_178250|Pramel7|347712|preferentially expressed antigen in melanoma like 7
mm9_v1_chr4_+_135051891_135051982	5.59072	FOX{I1,J2}.p2	AK015061|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene	AK019766|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene	NM_030189|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene	BC145657|4930555I21Rik|78806|RIKEN cDNA 4930555I21 gene
mm9_v1_chr1_+_40497472_40497552	5.58603	FOX{I1,J2}.p2	NM_001025602|Il1rl1|17082|interleukin 1 receptor-like 1	D13695|Il1rl1|17082|interleukin 1 receptor-like 1
mm9_v1_chr6_-_43259527_43259552	5.56078	FOX{I1,J2}.p2	AB221582|Nobox|18291|NOBOX oogenesis homeobox	BC125280|Nobox|18291|NOBOX oogenesis homeobox	BC125282|Nobox|18291|NOBOX oogenesis homeobox	AY061761|Nobox|18291|NOBOX oogenesis homeobox	NM_130869|Nobox|18291|NOBOX oogenesis homeobox
mm9_v1_chr19_-_34736879_34736908	5.54077	FOX{I1,J2}.p2	AK090072|Gm14446|667373|predicted gene 14446
mm9_v1_chr13_+_27186058_27186083	5.5339	FOX{I1,J2}.p2	AK082929|Prl3d1|18775|prolactin family 3, subfamily d, member 1	NM_008864|Prl3d1|18775|prolactin family 3, subfamily d, member 1	BC064736|Prl3d1|18775|prolactin family 3, subfamily d, member 1	M35662|Prl3d1|18775|prolactin family 3, subfamily d, member 1	AF525162|Prl3d1|18775|prolactin family 3, subfamily d, member 1
mm9_v1_chr7_-_27724396_27724407	5.52592	FOX{I1,J2}.p2	BC151116|Cyp2a22|233005|cytochrome P450, family 2, subfamily a, polypeptide 22	BC158034|Cyp2a22|233005|cytochrome P450, family 2, subfamily a, polypeptide 22	AK149509|Cyp2a22|233005|cytochrome P450, family 2, subfamily a, polypeptide 22	NM_001101467|Cyp2a22|233005|cytochrome P450, family 2, subfamily a, polypeptide 22
mm9_v1_chr3_-_95695852_95695897	5.51737	FOX{I1,J2}.p2	AF534879|BC028528|229600|cDNA sequence BC028528	NM_153513|BC028528|229600|cDNA sequence BC028528	BC028528|BC028528|229600|cDNA sequence BC028528
mm9_v1_chr3_-_95110715_95110725	5.51692	FOX{I1,J2}.p2	BC062140|Anxa9|71790|annexin A9	AK003395|Anxa9|71790|annexin A9	NM_001085383|Anxa9|71790|annexin A9
mm9_v1_chr16_-_36666078_36666195	5.51474	FOX{I1,J2}.p2	AF065897|Cd86|12524|CD86 antigen	AF065898|Cd86|12524|CD86 antigen	AF065899|Cd86|12524|CD86 antigen	AF065900|Cd86|12524|CD86 antigen	S70108|Cd86|12524|CD86 antigen	BC013807|Cd86|12524|CD86 antigen	L25606|Cd86|12524|CD86 antigen	AK079513|Cd86|12524|CD86 antigen	AK155710|Cd86|12524|CD86 antigen	AK170054|Cd86|12524|CD86 antigen	NM_019388|Cd86|12524|CD86 antigen	AK172548|Cd86|12524|CD86 antigen	AK172686|Cd86|12524|CD86 antigen
mm9_v1_chr3_-_107948968_107949026	5.4552	FOX{I1,J2}.p2	BC041107|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	BC003462|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK168578|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK133749|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK169067|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK167438|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm9_v1_chr3_+_95733228_95733353	5.44476	FOX{I1,J2}.p2	U89345|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK168380|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC080684|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	BC005690|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK202920|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK076049|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr2_-_6466116_6466118	5.44304	FOX{I1,J2}.p2	AK134815|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr3_+_87975676_87975677	5.43636	FOX{I1,J2}.p2	
mm9_v1_chr15_-_96245209_96245211	5.41496	FOX{I1,J2}.p2	AK219742|Scaf11|72193|SR-related CTD-associated factor 11
mm9_v1_chrX_-_159326220_159326424	5.41391	FOX{I1,J2}.p2	BC021373|Syap1|67043|synapse associated protein 1	AK147055|Syap1|67043|synapse associated protein 1	AK154843|Syap1|67043|synapse associated protein 1	AK051251|Syap1|67043|synapse associated protein 1	AK161413|Syap1|67043|synapse associated protein 1	AK008390|Syap1|67043|synapse associated protein 1	AK014893|Syap1|67043|synapse associated protein 1	AK011337|Syap1|67043|synapse associated protein 1	NM_025932|Syap1|67043|synapse associated protein 1
mm9_v1_chr3_-_107949028_107949092	5.40764	FOX{I1,J2}.p2	AK077490|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	NM_010306|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	BC020009|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK169285|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK004566|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm9_v1_chr10_-_61441842_61441910	5.40631	FOX{I1,J2}.p2	NM_007731|Col13a1|12817|collagen, type XIII, alpha 1	U30292|Col13a1|12817|collagen, type XIII, alpha 1
mm9_v1_chr9_-_107888185_107888220	5.40588	FOX{I1,J2}.p2	BC115538|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene	AK020090|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene	AK076092|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene
mm9_v1_chr4_+_126803283_126803296	5.37904	FOX{I1,J2}.p2	AK160613|Gm12942|100039968|predicted gene 12942	NM_001099319|Gm12942|100039968|predicted gene 12942
mm9_v1_chr4_+_125773958_125773995	5.32285	FOX{I1,J2}.p2	AK143443|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10	BC026476|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10	BC024543|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10
mm9_v1_chr9_-_123771243_123771245	5.29984	FOX{I1,J2}.p2	AK089908|Xcr1|23832|chemokine (C motif) receptor 1	AK040878|Xcr1|23832|chemokine (C motif) receptor 1	NM_011798|Xcr1|23832|chemokine (C motif) receptor 1
mm9_v1_chr6_+_134870418_134870458	5.29738	FOX{I1,J2}.p2	AK047669|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	NM_009875|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK050240|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK158411|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	BC014296|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B
mm9_v1_chr4_+_125773896_125773946	5.28861	FOX{I1,J2}.p2	NM_001163266|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10	NM_138721|Lsm10|116748|U7 snRNP-specific Sm-like protein LSM10
mm9_v1_chr16_-_55843956_55843970	5.28463	FOX{I1,J2}.p2	AK034283|Fam55c|385658|family with sequence similarity 55, member C
mm9_v1_chr5_+_32535080_32535120	5.25136	FOX{I1,J2}.p2	AK030142|Plb1|665270|phospholipase B1	NM_030072|Plb1|665270|phospholipase B1	AK015301|Plb1|665270|phospholipase B1	AK019494|Plb1|665270|phospholipase B1	AK015993|Plb1|665270|phospholipase B1
mm9_v1_chr2_-_163450863_163450871	5.2457	FOX{I1,J2}.p2	AK003471|Serinc3|26943|serine incorporator 3
mm9_v1_chr3_+_132772586_132772695	5.2447	FOX{I1,J2}.p2	AK015941|Ints12|71793|integrator complex subunit 12
mm9_v1_chr1_+_175561105_175561244	5.23309	FOX{I1,J2}.p2	AK150817|Pyhin1|236312|pyrin and HIN domain family, member 1	BC107378|Pyhin1|236312|pyrin and HIN domain family, member 1	BC107379|Pyhin1|236312|pyrin and HIN domain family, member 1	AK040884|Pyhin1|236312|pyrin and HIN domain family, member 1
mm9_v1_chr4_+_102243132_102243254	5.2304	FOX{I1,J2}.p2	AK171700|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AK150868|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr13_+_36209279_36209279	5.22658	FOX{I1,J2}.p2	NM_001039189|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	NM_024274|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm9_v1_chr8_+_19495096_19495096	5.21968	FOX{I1,J2}.p2	AJ298147|Defb7|246080|defensin beta 7	NM_139220|Defb7|246080|defensin beta 7
mm9_v1_chr8_+_86239094_86239097	5.20999	FOX{I1,J2}.p2	NM_197982|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
mm9_v1_chr1_+_175560938_175561047	5.2038	FOX{I1,J2}.p2	NM_175026|Pyhin1|236312|pyrin and HIN domain family, member 1	AK080371|Pyhin1|236312|pyrin and HIN domain family, member 1	BC096384|Pyhin1|236312|pyrin and HIN domain family, member 1
mm9_v1_chr15_-_101363197_101363254	5.20156	FOX{I1,J2}.p2	AY028607|Krt84|16680|keratin 84	BC114971|Krt84|16680|keratin 84	NM_008474|Krt84|16680|keratin 84
mm9_v1_chr10_+_126503214_126503242	5.19408	FOX{I1,J2}.p2	AK012202|Cdk4|12567|cyclin-dependent kinase 4
mm9_v1_chr19_-_34676457_34676466	5.1453	FOX{I1,J2}.p2	NM_001101605|Gm14446|667373|predicted gene 14446
mm9_v1_chr6_-_88396477_88396541	5.12283	FOX{I1,J2}.p2	AF268871|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AF283518|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	BC099675|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK147924|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	BC024915|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK171885|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK028424|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	AK087501|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific	NM_023060|Eefsec|65967|eukaryotic elongation factor, selenocysteine-tRNA-specific
mm9_v1_chrX_-_54579777_54579845	5.1224	FOX{I1,J2}.p2	AK028642|Arhgef6|73341|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
mm9_v1_chr7_-_125629996_125630002	5.1179	FOX{I1,J2}.p2	AK164927|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2	AK081844|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm9_v1_chr13_-_56996948_56996948	5.11247	FOX{I1,J2}.p2	AF139923|Trpc7|26946|transient receptor potential cation channel, subfamily C, member 7	BC117995|Trpc7|26946|transient receptor potential cation channel, subfamily C, member 7	NM_012035|Trpc7|26946|transient receptor potential cation channel, subfamily C, member 7
mm9_v1_chr8_+_98057984_98058038	5.07865	FOX{I1,J2}.p2	AK077130|Ccdc113|244608|coiled-coil domain containing 113	NM_172914|Ccdc113|244608|coiled-coil domain containing 113	BC060957|Ccdc113|244608|coiled-coil domain containing 113	BC048506|Ccdc113|244608|coiled-coil domain containing 113
mm9_v1_chr12_-_115170216_115170645	5.07313	FOX{I1,J2}.p2	BC092269|Ighg|380794|Immunoglobulin heavy chain (gamma polypeptide)
mm9_v1_chr6_-_87793459_87793650	5.07193	FOX{I1,J2}.p2	AK211658|Cnbp|12785|cellular nucleic acid binding protein	BC003805|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr7_-_3867085_3867115	5.05901	FOX{I1,J2}.p2	BC119598|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	NM_011087|Pira1|18722|paired-Ig-like receptor A1	U96682|Pira1|18722|paired-Ig-like receptor A1	BC127613|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	BC128500|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	U96684|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	AK152898|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	NM_011090|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	AK030846|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6	AK054162|Lilra6|18726|leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6
mm9_v1_chr5_-_141476549_141476556	5.04773	FOX{I1,J2}.p2	AK131134|Card11|108723|caspase recruitment domain family, member 11	NM_175362|Card11|108723|caspase recruitment domain family, member 11
mm9_v1_chr5_-_123183537_123183571	5.04722	FOX{I1,J2}.p2	AK213252|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr6_+_42214999_42215177	5.04106	FOX{I1,J2}.p2	NM_007610|Casp2|12366|caspase 2	Y13085|Casp2|12366|caspase 2	BC034262|Casp2|12366|caspase 2	AK170649|Casp2|12366|caspase 2	AK052396|Casp2|12366|caspase 2	AK133829|Casp2|12366|caspase 2	AK042072|Casp2|12366|caspase 2	D28492|Casp2|12366|caspase 2	AK199368|Casp2|12366|caspase 2	AK210521|Casp2|12366|caspase 2
mm9_v1_chr7_+_148153974_148154146	5.02865	FOX{I1,J2}.p2	NM_001112715|Ifitm1|68713|interferon induced transmembrane protein 1	BC090972|Ifitm1|68713|interferon induced transmembrane protein 1	AK004121|Ifitm1|68713|interferon induced transmembrane protein 1	AK169960|Ifitm1|68713|interferon induced transmembrane protein 1	BC090258|Ifitm1|68713|interferon induced transmembrane protein 1
mm9_v1_chr10_-_14438019_14438019	5.01415	FOX{I1,J2}.p2	AK018698|Gje1|76743|gap junction protein, epsilon 1	NM_029722|Gje1|76743|gap junction protein, epsilon 1
mm9_v1_chr1_-_64167818_64167853	5.00688	FOX{I1,J2}.p2	AF327568|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr6_-_129422702_129422806	4.9908	FOX{I1,J2}.p2	AY534909|Clec7a|56644|C-type lectin domain family 7, member a	BC027742|Clec7a|56644|C-type lectin domain family 7, member a	AF262985|Clec7a|56644|C-type lectin domain family 7, member a	NM_020008|Clec7a|56644|C-type lectin domain family 7, member a
mm9_v1_chr16_+_44867209_44867209	4.98758	FOX{I1,J2}.p2	AY230198|Cd200r2|271375|Cd200 receptor 2	NM_206535|Cd200r2|271375|Cd200 receptor 2
mm9_v1_chrX_+_34335647_34335650	4.96079	FOX{I1,J2}.p2	AK012751|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK002283|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK017881|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK088730|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	X70847|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr18_+_36904309_36904426	4.95874	FOX{I1,J2}.p2	NM_011879|Ik|24010|IK cytokine	BC006706|Ik|24010|IK cytokine	AK167238|Ik|24010|IK cytokine	BC029148|Ik|24010|IK cytokine	AK050625|Ik|24010|IK cytokine	AK029644|Ik|24010|IK cytokine	AK163766|Ik|24010|IK cytokine	AK087976|Ik|24010|IK cytokine	BC029671|Ik|24010|IK cytokine	BC029694|Ik|24010|IK cytokine	AK088908|Ik|24010|IK cytokine	AK082356|Ik|24010|IK cytokine	BC014739|Ik|24010|IK cytokine	BC026569|Ik|24010|IK cytokine	BC033356|Ik|24010|IK cytokine	AJ006130|Ik|24010|IK cytokine
mm9_v1_chr11_+_8948594_8948715	4.95012	FOX{I1,J2}.p2	NM_001037928|Gm11992|626870|predicted gene 11992	AK154909|Gm11992|626870|predicted gene 11992	AK160996|Gm11992|626870|predicted gene 11992	BC147253|Gm11992|626870|predicted gene 11992	BC147254|Gm11992|626870|predicted gene 11992
mm9_v1_chr13_+_43497279_43497424	4.90862	FOX{I1,J2}.p2	AK140839|Nol7|70078|nucleolar protein 7
mm9_v1_chr7_-_3796619_3796646	4.887	FOX{I1,J2}.p2	U96683|Pira2|18725|paired-Ig-like receptor A2	AF288356|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	U96682|Pira1|18722|paired-Ig-like receptor A1	BC026937|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3
mm9_v1_chr4_+_122731563_122731731	4.87542	FOX{I1,J2}.p2	AK188355|Trit1|66966|tRNA isopentenyltransferase 1	AK219389|Trit1|66966|tRNA isopentenyltransferase 1	AK189511|Trit1|66966|tRNA isopentenyltransferase 1
mm9_v1_chr2_-_29643157_29643203	4.86824	FOX{I1,J2}.p2	BC024075|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK167294|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	BC015285|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK050583|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK087102|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK050587|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK081579|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	AK043949|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)	NM_145520|Trub2|227682|TruB pseudouridine (psi) synthase homolog 2 (E. coli)
mm9_v1_chr6_+_39331379_39331426	4.86753	FOX{I1,J2}.p2	AK017590|Rab19|19331|RAB19, member RAS oncogene family	BC032936|Rab19|19331|RAB19, member RAS oncogene family	NM_011226|Rab19|19331|RAB19, member RAS oncogene family
mm9_v1_chrX_+_34335642_34335646	4.85338	FOX{I1,J2}.p2	U27316|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK003467|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	NM_007451|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr2_+_13504271_13504305	4.84275	FOX{I1,J2}.p2	
mm9_v1_chr1_-_175465858_175465981	4.8411	FOX{I1,J2}.p2	BC094916|BC094916|545384|cDNA sequence BC094916
mm9_v1_chr7_+_114352958_114352958	4.82473	FOX{I1,J2}.p2	AK005907|Rbmxl2|76572|RNA binding motif protein, X-linked-like 2	NM_029660|Rbmxl2|76572|RNA binding motif protein, X-linked-like 2
mm9_v1_chr7_-_128217980_128218068	4.82288	FOX{I1,J2}.p2	AK156382|Igsf6|80719|immunoglobulin superfamily, member 6	AK040569|Igsf6|80719|immunoglobulin superfamily, member 6	AK163058|Igsf6|80719|immunoglobulin superfamily, member 6	AK151417|Igsf6|80719|immunoglobulin superfamily, member 6	AK152186|Igsf6|80719|immunoglobulin superfamily, member 6	BC057951|Igsf6|80719|immunoglobulin superfamily, member 6	AJ278575|Igsf6|80719|immunoglobulin superfamily, member 6	NM_030691|Igsf6|80719|immunoglobulin superfamily, member 6
mm9_v1_chr8_-_72657402_72657524	4.81601	FOX{I1,J2}.p2	
mm9_v1_chr17_+_36131397_36131470	4.80448	FOX{I1,J2}.p2	AK078380|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	AK020860|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	AK142942|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	BC055918|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene
mm9_v1_chr12_-_71328603_71328613	4.79202	FOX{I1,J2}.p2	BC013636|Pygl|110095|liver glycogen phosphorylase	AF288783|Pygl|110095|liver glycogen phosphorylase	AK167337|Pygl|110095|liver glycogen phosphorylase
mm9_v1_chr17_-_36248574_36248638	4.7811	FOX{I1,J2}.p2	AF100703|H2-T23|15040|histocompatibility 2, T region locus 23	AF041855|H2-T23|15040|histocompatibility 2, T region locus 23	L00606|H2-T23|15040|histocompatibility 2, T region locus 23	BC005648|H2-T23|15040|histocompatibility 2, T region locus 23	AK083376|C920025E04Rik|667803|RIKEN cDNA C920025E04 gene	AK083387|C920025E04Rik|667803|RIKEN cDNA C920025E04 gene
mm9_v1_chr9_+_120001250_120001250	4.7628	FOX{I1,J2}.p2	NM_007720|Ccr8|12776|chemokine (C-C motif) receptor 8	Z98205|Ccr8|12776|chemokine (C-C motif) receptor 8
mm9_v1_chr2_-_13466273_13466302	4.75981	FOX{I1,J2}.p2	AF045889|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	AF012129|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	AK050403|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	AK029136|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	BC087892|Trdmt1|13434|tRNA aspartic acid methyltransferase 1	NM_010067|Trdmt1|13434|tRNA aspartic acid methyltransferase 1
mm9_v1_chr11_-_69479553_69479654	4.75788	FOX{I1,J2}.p2	NM_009853|Cd68|12514|CD68 antigen	AK170443|Cd68|12514|CD68 antigen	BC021637|Cd68|12514|CD68 antigen	AK002264|Cd68|12514|CD68 antigen	X68273|Cd68|12514|CD68 antigen
mm9_v1_chr9_-_100407241_100407274	4.75551	FOX{I1,J2}.p2	AK053155|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	AK054051|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr7_+_86058650_86058744	4.74861	FOX{I1,J2}.p2	NM_020583|Isg20|57444|interferon-stimulated protein	BC022751|Isg20|57444|interferon-stimulated protein	AK136756|Isg20|57444|interferon-stimulated protein
mm9_v1_chr11_+_79902901_79902965	4.73711	FOX{I1,J2}.p2	NM_001029856|Atad5|237877|ATPase family, AAA domain containing 5	BC038279|Atad5|237877|ATPase family, AAA domain containing 5	AK053857|Atad5|237877|ATPase family, AAA domain containing 5	AK085211|Atad5|237877|ATPase family, AAA domain containing 5	AY557610|Atad5|237877|ATPase family, AAA domain containing 5	AK165945|Atad5|237877|ATPase family, AAA domain containing 5	AK048355|Atad5|237877|ATPase family, AAA domain containing 5	AK032814|Atad5|237877|ATPase family, AAA domain containing 5
mm9_v1_chr12_-_71328615_71328621	4.73431	FOX{I1,J2}.p2	AK041189|Pygl|110095|liver glycogen phosphorylase	AK140321|Pygl|110095|liver glycogen phosphorylase
mm9_v1_chr12_-_71328622_71328669	4.72222	FOX{I1,J2}.p2	AK145989|Pygl|110095|liver glycogen phosphorylase	NM_133198|Pygl|110095|liver glycogen phosphorylase
mm9_v1_chr3_-_15575064_15575064	4.71961	FOX{I1,J2}.p2	AK154879|Sirpb1b|668101|signal-regulatory protein beta 1B	NM_001173460|Sirpb1b|668101|signal-regulatory protein beta 1B
mm9_v1_chr3_-_123088789_123088909	4.71094	FOX{I1,J2}.p2	AK083169|Mettl14|210529|methyltransferase like 14	AK089949|Mettl14|210529|methyltransferase like 14	AK129409|Mettl14|210529|methyltransferase like 14	BC052204|Mettl14|210529|methyltransferase like 14	AK136652|Mettl14|210529|methyltransferase like 14	AK146881|Mettl14|210529|methyltransferase like 14	AK153810|Mettl14|210529|methyltransferase like 14	NM_201638|Mettl14|210529|methyltransferase like 14
mm9_v1_chr2_-_74497475_74497613	4.69064	FOX{I1,J2}.p2	M93128|Evx2|14029|even skipped homeotic gene 2 homolog	NM_007967|Evx2|14029|even skipped homeotic gene 2 homolog	BC061467|Evx2|14029|even skipped homeotic gene 2 homolog
mm9_v1_chr1_+_87546558_87546676	4.66499	FOX{I1,J2}.p2	AK042095|Sp100|20684|nuclear antigen Sp100	AK080004|Sp100|20684|nuclear antigen Sp100	AK152348|Sp100|20684|nuclear antigen Sp100	U83630|Sp100|20684|nuclear antigen Sp100	AK146054|Sp100|20684|nuclear antigen Sp100	AK153487|Sp100|20684|nuclear antigen Sp100	BC069183|Sp100|20684|nuclear antigen Sp100	AK083304|Sp100|20684|nuclear antigen Sp100	NM_013673|Sp100|20684|nuclear antigen Sp100	CT010199|Sp100|20684|nuclear antigen Sp100	U83636|Sp100|20684|nuclear antigen Sp100
mm9_v1_chr10_-_90612412_90612509	4.66427	FOX{I1,J2}.p2	AK208952|Tmpo|21917|thymopoietin
mm9_v1_chr15_+_88813335_88813423	4.6578	FOX{I1,J2}.p2	AK131735|Mov10l1|83456|Moloney leukemia virus 10-like 1	NM_031260|Mov10l1|83456|Moloney leukemia virus 10-like 1
mm9_v1_chr11_-_99471502_99471502	4.61771	FOX{I1,J2}.p2	NM_001099346|Gm11937|100041488|predicted gene 11937
mm9_v1_chr5_-_105668551_105668551	4.61749	FOX{I1,J2}.p2	BC112328|Gbp10|626578|guanylate-binding protein 10	BC114209|Gbp10|626578|guanylate-binding protein 10	DQ985743|Gbp10|626578|guanylate-binding protein 10	NM_001039646|Gbp10|626578|guanylate-binding protein 10
mm9_v1_chr3_+_95733186_95733221	4.61256	FOX{I1,J2}.p2	AK088401|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK012759|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK049647|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK159446|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	AK147888|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr4_+_102242664_102242699	4.60526	FOX{I1,J2}.p2	NM_001177980|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC023751|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr3_-_104580464_104580464	4.59275	FOX{I1,J2}.p2	AK078681|Fam19a3|329731|family with sequence similarity 19, member A3	NM_183224|Fam19a3|329731|family with sequence similarity 19, member A3
mm9_v1_chr1_+_133558486_133558487	4.58901	FOX{I1,J2}.p2	AK157907|Ctse|13034|cathepsin E	AK165242|Ctse|13034|cathepsin E
mm9_v1_chr8_+_74120004_74120094	4.58426	FOX{I1,J2}.p2	
mm9_v1_chr17_+_34341467_34341526	4.57374	FOX{I1,J2}.p2	AK145234|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK151657|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK161091|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	BC051257|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK020022|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK079667|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK151376|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK151483|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK153287|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	BC005578|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
mm9_v1_chr7_+_31762061_31762061	4.53649	FOX{I1,J2}.p2	AK028081|Fam187b|76415|family with sequence similarity 187, member B	BC120864|Fam187b|76415|family with sequence similarity 187, member B	BC125560|Fam187b|76415|family with sequence similarity 187, member B	NM_175240|Fam187b|76415|family with sequence similarity 187, member B
mm9_v1_chr3_-_37131486_37131557	4.53306	FOX{I1,J2}.p2	AY428162|Il21|60505|interleukin 21	DQ645418|Il21|60505|interleukin 21	BC125414|Il21|60505|interleukin 21	BC125416|Il21|60505|interleukin 21	AF254070|Il21|60505|interleukin 21	NM_021782|Il21|60505|interleukin 21
mm9_v1_chr11_-_26493919_26493922	4.52888	FOX{I1,J2}.p2	NM_027260|Vrk2|69922|vaccinia related kinase 2	AK089825|Vrk2|69922|vaccinia related kinase 2
mm9_v1_chr7_-_3849680_3849726	4.51841	FOX{I1,J2}.p2	U96686|Pira5|18728|paired-Ig-like receptor A5	AF055896|Pira11|18724|paired-Ig-like receptor A11	AF041036|Pira11|18724|paired-Ig-like receptor A11	BC150155|Pira11|18724|paired-Ig-like receptor A11	NM_001166672|Gm14548|100038909|predicted gene 14548	NM_011091|Pira4|18727|paired-Ig-like receptor A4	U96685|Pira4|18727|paired-Ig-like receptor A4	BC103528|Pira11|18724|paired-Ig-like receptor A11	BC103529|Pira11|18724|paired-Ig-like receptor A11	BC139803|Pira11|18724|paired-Ig-like receptor A11	NM_011088|Pira11|18724|paired-Ig-like receptor A11	AK165650|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	NM_011094|Pira7|18730|paired-Ig-like receptor A7	U96688|Pira7|18730|paired-Ig-like receptor A7	BC150712|Pira11|18724|paired-Ig-like receptor A11
mm9_v1_chr4_-_147183894_147183948	4.5164	FOX{I1,J2}.p2	NM_001127189|Gm13157|100041677|predicted gene 13157	AK011687|2610036A22Rik|70190|RIKEN cDNA 2610036A22 gene
mm9_v1_chr3_+_134875526_134875622	4.51491	FOX{I1,J2}.p2	AK133445|Cenpe|229841|centromere protein E	NM_173762|Cenpe|229841|centromere protein E	BC080703|Cenpe|229841|centromere protein E	BC052843|Cenpe|229841|centromere protein E	BC039755|Cenpe|229841|centromere protein E	BC106096|Cenpe|229841|centromere protein E	AY493378|Cenpe|229841|centromere protein E
mm9_v1_chr4_+_154927575_154927585	4.50825	FOX{I1,J2}.p2	AK209108|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK213242|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK217766|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1	AK219535|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr17_-_33855557_33855658	4.50269	FOX{I1,J2}.p2	BC002144|March2|224703|membrane-associated ring finger (C3HC4) 2	AK053434|March2|224703|membrane-associated ring finger (C3HC4) 2	AK079234|March2|224703|membrane-associated ring finger (C3HC4) 2	AK081495|March2|224703|membrane-associated ring finger (C3HC4) 2	AK036614|March2|224703|membrane-associated ring finger (C3HC4) 2	AK039778|March2|224703|membrane-associated ring finger (C3HC4) 2	AK040163|March2|224703|membrane-associated ring finger (C3HC4) 2	NM_145486|March2|224703|membrane-associated ring finger (C3HC4) 2
mm9_v1_chr4_+_126803305_126803317	4.50243	FOX{I1,J2}.p2	AK156456|Gm12942|100039968|predicted gene 12942
mm9_v1_chr11_-_101087730_101087737	4.49718	FOX{I1,J2}.p2	AK154565|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr8_+_72332573_72332679	4.48374	FOX{I1,J2}.p2	AK043883|Gmip|78816|Gem-interacting protein	BC057037|Gmip|78816|Gem-interacting protein	NM_198101|Gmip|78816|Gem-interacting protein	AK082337|Gmip|78816|Gem-interacting protein	AK172438|Gmip|78816|Gem-interacting protein	BC060628|Gmip|78816|Gem-interacting protein	AK137177|Gmip|78816|Gem-interacting protein	AK052221|Gmip|78816|Gem-interacting protein
mm9_v1_chr6_-_123239886_123239943	4.47509	FOX{I1,J2}.p2	AK152333|Clec4e|56619|C-type lectin domain family 4, member e	AK156437|Clec4e|56619|C-type lectin domain family 4, member e	AK036493|Clec4e|56619|C-type lectin domain family 4, member e	AK089286|Clec4e|56619|C-type lectin domain family 4, member e	AK150528|Clec4e|56619|C-type lectin domain family 4, member e	AK150899|Clec4e|56619|C-type lectin domain family 4, member e	AK151101|Clec4e|56619|C-type lectin domain family 4, member e	AK151912|Clec4e|56619|C-type lectin domain family 4, member e	AK153008|Clec4e|56619|C-type lectin domain family 4, member e	AK153308|Clec4e|56619|C-type lectin domain family 4, member e	AK155452|Clec4e|56619|C-type lectin domain family 4, member e	AK171103|Clec4e|56619|C-type lectin domain family 4, member e	AB024717|Clec4e|56619|C-type lectin domain family 4, member e	NM_019948|Clec4e|56619|C-type lectin domain family 4, member e
mm9_v1_chr10_+_87553816_87553819	4.45955	FOX{I1,J2}.p2	AK138363|Pmch|110312|pro-melanin-concentrating hormone	BC048534|Pmch|110312|pro-melanin-concentrating hormone	NM_029971|Pmch|110312|pro-melanin-concentrating hormone	AK020723|Pmch|110312|pro-melanin-concentrating hormone
mm9_v1_chr7_+_128061297_128061331	4.45912	FOX{I1,J2}.p2	AK012184|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	AK144721|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	AK146279|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	AK159723|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	BC037637|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	BC028924|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E
mm9_v1_chr1_+_163325568_163325712	4.43754	FOX{I1,J2}.p2	NM_009452|Tnfsf4|22164|tumor necrosis factor (ligand) superfamily, member 4	U12763|Tnfsf4|22164|tumor necrosis factor (ligand) superfamily, member 4	FJ176943|Tnfsf4|22164|tumor necrosis factor (ligand) superfamily, member 4
mm9_v1_chr1_+_133558507_133558510	4.43435	FOX{I1,J2}.p2	AK143581|Ctse|13034|cathepsin E
mm9_v1_chr9_-_15084310_15084404	4.43281	FOX{I1,J2}.p2	BC020185|Med17|234959|mediator complex subunit 17	NM_144933|Med17|234959|mediator complex subunit 17	AK033151|Med17|234959|mediator complex subunit 17	AK142033|Med17|234959|mediator complex subunit 17	AK038451|Med17|234959|mediator complex subunit 17	AK049112|Med17|234959|mediator complex subunit 17	AK151377|Med17|234959|mediator complex subunit 17
mm9_v1_chr4_-_134323845_134323948	4.42998	FOX{I1,J2}.p2	BC021467|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK159800|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC066808|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	BC067411|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK167290|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK029008|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	AK148340|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1	NM_145554|Ldlrap1|100017|low density lipoprotein receptor adaptor protein 1
mm9_v1_chr9_+_92204214_92204235	4.42411	FOX{I1,J2}.p2	AK132905|1700057G04Rik|78459|RIKEN cDNA 1700057G04 gene	NM_001033184|1700057G04Rik|78459|RIKEN cDNA 1700057G04 gene	AK018865|1700057G04Rik|78459|RIKEN cDNA 1700057G04 gene
mm9_v1_chr17_+_34341417_34341460	4.41797	FOX{I1,J2}.p2	NM_011530|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK159200|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
mm9_v1_chr2_+_158450623_158450686	4.41667	FOX{I1,J2}.p2	AK046312|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	AK142980|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	NM_175419|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	AK046584|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC028806|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC052039|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC037522|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)
mm9_v1_chr9_-_110959702_110959793	4.41587	FOX{I1,J2}.p2	AF030185|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	AK145946|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	AK007808|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	NM_017466|Ccrl2|54199|chemokine (C-C motif) receptor-like 2
mm9_v1_chr13_-_60998747_60998807	4.41172	FOX{I1,J2}.p2	AY034578|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	X15592|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	AK150917|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	NM_001145801|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta	NM_007797|Ctla2b|13025|cytotoxic T lymphocyte-associated protein 2 beta
mm9_v1_chr2_-_113688771_113688881	4.39617	FOX{I1,J2}.p2	BC050875|Arhgap11a|228482|Rho GTPase activating protein 11A	AK129034|Arhgap11a|228482|Rho GTPase activating protein 11A	BC058105|Arhgap11a|228482|Rho GTPase activating protein 11A	NM_181416|Arhgap11a|228482|Rho GTPase activating protein 11A	AK162074|Arhgap11a|228482|Rho GTPase activating protein 11A
mm9_v1_chr9_-_110959315_110959476	4.39335	FOX{I1,J2}.p2	AJ318863|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	AF316576|Ccrl2|54199|chemokine (C-C motif) receptor-like 2
mm9_v1_chr15_-_82169203_82169306	4.3899	FOX{I1,J2}.p2	AF079458|Naga|17939|N-acetyl galactosaminidase, alpha	AK133576|Naga|17939|N-acetyl galactosaminidase, alpha	BC021631|Naga|17939|N-acetyl galactosaminidase, alpha	AK077116|Naga|17939|N-acetyl galactosaminidase, alpha	AK153002|Naga|17939|N-acetyl galactosaminidase, alpha	NM_008669|Naga|17939|N-acetyl galactosaminidase, alpha
mm9_v1_chr9_-_106378494_106378548	4.37987	FOX{I1,J2}.p2	AK165070|Parp3|235587|poly (ADP-ribose) polymerase family, member 3	BC014870|Parp3|235587|poly (ADP-ribose) polymerase family, member 3	AK170541|Parp3|235587|poly (ADP-ribose) polymerase family, member 3	AY046317|Parp3|235587|poly (ADP-ribose) polymerase family, member 3
mm9_v1_chr17_+_31814873_31814975	4.3718	FOX{I1,J2}.p2	AK143463|Cryaa|12954|crystallin, alpha A	BC085170|Cryaa|12954|crystallin, alpha A	BC085172|Cryaa|12954|crystallin, alpha A	NM_013501|Cryaa|12954|crystallin, alpha A	AJ310308|Cryaa|12954|crystallin, alpha A	BC092385|Cryaa|12954|crystallin, alpha A	J00376|Cryaa|12954|crystallin, alpha A
mm9_v1_chr2_-_35316760_35317051	4.37015	FOX{I1,J2}.p2	BC006810|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AK088605|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	M26925|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	M85153|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AF297615|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	NM_001145821|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	NM_010283|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AK004753|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AK159087|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3
mm9_v1_chr1_-_53813191_53813277	4.3471	FOX{I1,J2}.p2	
mm9_v1_chr2_-_34817068_34817291	4.34475	FOX{I1,J2}.p2	AK169515|Traf1|22029|TNF receptor-associated factor 1	AK089281|Traf1|22029|TNF receptor-associated factor 1	L35302|Traf1|22029|TNF receptor-associated factor 1	AK142931|Traf1|22029|TNF receptor-associated factor 1	AK029135|Traf1|22029|TNF receptor-associated factor 1	NM_009421|Traf1|22029|TNF receptor-associated factor 1
mm9_v1_chr4_-_143802891_143802919	4.33799	FOX{I1,J2}.p2	BC094895|C87977|97187|expressed sequence C87977	AK139502|C87977|97187|expressed sequence C87977	NM_001177542|C87977|97187|expressed sequence C87977
mm9_v1_chr9_+_98197001_98197080	4.33576	FOX{I1,J2}.p2	BC005737|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	NM_144533|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK040783|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK041526|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3	AK041897|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3
mm9_v1_chr5_+_77694506_77694565	4.3286	FOX{I1,J2}.p2	AK004945|Rest|19712|RE1-silencing transcription factor	NM_011263|Rest|19712|RE1-silencing transcription factor	AK156514|Rest|19712|RE1-silencing transcription factor
mm9_v1_chr11_-_79337251_79337263	4.31905	FOX{I1,J2}.p2	NM_001077496|Evi2b|216984|ecotropic viral integration site 2b
mm9_v1_chr3_-_131006068_131006148	4.31397	FOX{I1,J2}.p2	AK142740|Cyp2u1|71519|cytochrome P450, family 2, subfamily u, polypeptide 1	AK018458|Cyp2u1|71519|cytochrome P450, family 2, subfamily u, polypeptide 1	AK041477|Cyp2u1|71519|cytochrome P450, family 2, subfamily u, polypeptide 1	NM_027816|Cyp2u1|71519|cytochrome P450, family 2, subfamily u, polypeptide 1
mm9_v1_chr6_-_87483228_87483252	4.31053	FOX{I1,J2}.p2	AK169897|Arhgap25|232201|Rho GTPase activating protein 25	NM_001037727|Arhgap25|232201|Rho GTPase activating protein 25	AK159598|Arhgap25|232201|Rho GTPase activating protein 25	AK159941|Arhgap25|232201|Rho GTPase activating protein 25
mm9_v1_chr1_-_88284715_88284736	4.29907	FOX{I1,J2}.p2	AF044602|Nmur1|14767|neuromedin U receptor 1	NM_010341|Nmur1|14767|neuromedin U receptor 1	BC120822|Nmur1|14767|neuromedin U receptor 1	BC137775|Nmur1|14767|neuromedin U receptor 1
mm9_v1_chr14_-_119076152_119076152	4.27569	FOX{I1,J2}.p2	AK052778|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4	NM_001163675|Abcc4|239273|ATP-binding cassette, sub-family C (CFTR/MRP), member 4
mm9_v1_chr19_-_34673889_34673923	4.27526	FOX{I1,J2}.p2	NM_001110517|Gm14446|667373|predicted gene 14446
mm9_v1_chr10_-_20444654_20444883	4.26939	FOX{I1,J2}.p2	AF190639|Pde7b|29863|phosphodiesterase 7B	BC130267|Pde7b|29863|phosphodiesterase 7B	AK020137|Pde7b|29863|phosphodiesterase 7B	AK040876|Pde7b|29863|phosphodiesterase 7B	NM_013875|Pde7b|29863|phosphodiesterase 7B	AK035385|Pde7b|29863|phosphodiesterase 7B
mm9_v1_chr17_+_87682206_87682305	4.26808	FOX{I1,J2}.p2	AK040578|Ttc7|225049|tetratricopeptide repeat domain 7	NM_028639|Ttc7|225049|tetratricopeptide repeat domain 7	AK050263|Ttc7|225049|tetratricopeptide repeat domain 7	AK090252|Ttc7|225049|tetratricopeptide repeat domain 7	AK153704|Ttc7|225049|tetratricopeptide repeat domain 7	AK080284|Ttc7|225049|tetratricopeptide repeat domain 7	AK040610|Ttc7|225049|tetratricopeptide repeat domain 7	AK004107|Ttc7|225049|tetratricopeptide repeat domain 7
mm9_v1_chrX_-_71526939_71526996	4.26728	FOX{I1,J2}.p2	DQ116784|Dnase1l1|69537|deoxyribonuclease 1-like 1	AK150242|Dnase1l1|69537|deoxyribonuclease 1-like 1
mm9_v1_chr16_-_58928469_58928469	4.26502	FOX{I1,J2}.p2	NM_146999|Olfr181|259001|olfactory receptor 181
mm9_v1_chr2_-_109118405_109118446	4.26441	FOX{I1,J2}.p2	BC115926|Mett5d1|76894|methyltransferase 5 domain containing 1	BC117549|Mett5d1|76894|methyltransferase 5 domain containing 1	BC106186|Mett5d1|76894|methyltransferase 5 domain containing 1	BC089533|Mett5d1|76894|methyltransferase 5 domain containing 1	AK002682|Mett5d1|76894|methyltransferase 5 domain containing 1	NM_029790|Mett5d1|76894|methyltransferase 5 domain containing 1
mm9_v1_chrX_-_131117602_131117692	4.26242	FOX{I1,J2}.p2	BC053392|Btk|12229|Bruton agammaglobulinemia tyrosine kinase	L29788|Btk|12229|Bruton agammaglobulinemia tyrosine kinase	L08967|Btk|12229|Bruton agammaglobulinemia tyrosine kinase	NM_013482|Btk|12229|Bruton agammaglobulinemia tyrosine kinase	L10627|Btk|12229|Bruton agammaglobulinemia tyrosine kinase
mm9_v1_chr13_+_24706474_24706497	4.25741	FOX{I1,J2}.p2	AK041665|Fam65b|193385|family with sequence similarity 65, member B	NM_178658|Fam65b|193385|family with sequence similarity 65, member B	AK036452|Fam65b|193385|family with sequence similarity 65, member B	AK040887|Fam65b|193385|family with sequence similarity 65, member B
mm9_v1_chr8_-_122364230_122364443	4.25158	FOX{I1,J2}.p2	CT010261|Cotl1|72042|coactosin-like 1 (Dictyostelium)	BC011068|Cotl1|72042|coactosin-like 1 (Dictyostelium)	BC010249|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK150888|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK007994|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK008085|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK010052|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK039644|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK151690|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK157694|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK172403|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK148854|Cotl1|72042|coactosin-like 1 (Dictyostelium)
mm9_v1_chr12_-_88784769_88784966	4.24933	FOX{I1,J2}.p2	BC050856|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC094381|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK012518|Nrp|654309|neural regeneration protein	AK143105|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK042102|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK049549|Nrp|654309|neural regeneration protein	AK144828|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	NM_001102565|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC119399|Nrp|654309|neural regeneration protein	BC119401|Nrp|654309|neural regeneration protein	AY753183|Nrp|654309|neural regeneration protein	NM_001013372|Nrp|654309|neural regeneration protein
mm9_v1_chr7_+_4225744_4225790	4.22985	FOX{I1,J2}.p2	NM_011093|Pira6|18729|paired-Ig-like receptor A6	U96687|Pira6|18729|paired-Ig-like receptor A6	AF041035|Pira6|18729|paired-Ig-like receptor A6	NM_008848|Pira6|18729|paired-Ig-like receptor A6
mm9_v1_chr11_-_83343962_83344025	4.22778	FOX{I1,J2}.p2	AY722103|Ccl5|20304|chemokine (C-C motif) ligand 5	CT010315|Ccl5|20304|chemokine (C-C motif) ligand 5	AF065944|Ccl5|20304|chemokine (C-C motif) ligand 5	AF065945|Ccl5|20304|chemokine (C-C motif) ligand 5	AF065946|Ccl5|20304|chemokine (C-C motif) ligand 5	AF065947|Ccl5|20304|chemokine (C-C motif) ligand 5	AF128187|Ccl5|20304|chemokine (C-C motif) ligand 5	M77747|Ccl5|20304|chemokine (C-C motif) ligand 5	BC033508|Ccl5|20304|chemokine (C-C motif) ligand 5	AK158074|Ccl5|20304|chemokine (C-C motif) ligand 5	AK003101|Ccl5|20304|chemokine (C-C motif) ligand 5	NM_013653|Ccl5|20304|chemokine (C-C motif) ligand 5
mm9_v1_chr18_-_84849981_84849981	4.22677	FOX{I1,J2}.p2	AK168856|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)
mm9_v1_chr4_-_3799165_3799251	4.20732	FOX{I1,J2}.p2	BC137690|Mos|17451|Moloney sarcoma oncogene	BC145745|Mos|17451|Moloney sarcoma oncogene	AK133089|Mos|17451|Moloney sarcoma oncogene	NM_020021|Mos|17451|Moloney sarcoma oncogene
mm9_v1_chr3_+_89006824_89006905	4.20569	FOX{I1,J2}.p2	AK082767|Gba|14466|glucosidase, beta, acid	NM_001077411|Gba|14466|glucosidase, beta, acid	AK201806|Gba|14466|glucosidase, beta, acid	AK166198|Gba|14466|glucosidase, beta, acid	BC006663|Gba|14466|glucosidase, beta, acid	NM_008094|Gba|14466|glucosidase, beta, acid	AK152745|Gba|14466|glucosidase, beta, acid
mm9_v1_chr5_-_65324796_65324842	4.20552	FOX{I1,J2}.p2	AK143721|Tlr1|21897|toll-like receptor 1
mm9_v1_chr12_-_27141171_27141175	4.20101	FOX{I1,J2}.p2	AK153435|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chr1_+_133558517_133558572	4.19506	FOX{I1,J2}.p2	X97399|Ctse|13034|cathepsin E	AK165271|Ctse|13034|cathepsin E	CT010252|Ctse|13034|cathepsin E
mm9_v1_chr18_+_21119972_21120137	4.1815	FOX{I1,J2}.p2	AK016103|Rnf125|67664|ring finger protein 125	AB259692|Rnf125|67664|ring finger protein 125
mm9_v1_chr5_+_93602126_93602279	4.17692	FOX{I1,J2}.p2	AK018083|Sept11|52398|septin 11	AK075989|Sept11|52398|septin 11
mm9_v1_chr1_-_133173495_133173524	4.1607	FOX{I1,J2}.p2	BC037446|Ikbke|56489|inhibitor of kappaB kinase epsilon
mm9_v1_chr14_-_77436363_77436492	4.15275	FOX{I1,J2}.p2	AK152154|9030625A04Rik|210808|RIKEN cDNA 9030625A04 gene	AK033565|9030625A04Rik|210808|RIKEN cDNA 9030625A04 gene	NM_172488|9030625A04Rik|210808|RIKEN cDNA 9030625A04 gene	AK153349|9030625A04Rik|210808|RIKEN cDNA 9030625A04 gene
mm9_v1_chr7_-_133726668_133726903	4.15264	FOX{I1,J2}.p2	U92811|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	U47106|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC060306|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	U68064|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	AK078976|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	NM_009907|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC080759|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC058753|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm9_v1_chr11_+_48613820_48613894	4.14925	FOX{I1,J2}.p2	AK168349|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166868|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166786|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166800|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK017772|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK051226|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK159797|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK161234|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166945|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK168086|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK168096|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK168196|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK169612|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	NM_008143|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK160739|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	D29802|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	X75313|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK002493|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166417|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	BC046760|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	BC020322|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK160528|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1
mm9_v1_chrX_-_54591905_54591905	4.13714	FOX{I1,J2}.p2	AF393831|Arhgef6|73341|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6	NM_152801|Arhgef6|73341|Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6
mm9_v1_chr4_+_32504409_32504501	4.11117	FOX{I1,J2}.p2	NM_001109661|Bach2|12014|BTB and CNC homology 2	BC131642|Bach2|12014|BTB and CNC homology 2
mm9_v1_chr19_+_10280522_10280595	4.1061	FOX{I1,J2}.p2	NM_001163431|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene	BC058335|1810006K21Rik|69038|RIKEN cDNA 1810006K21 gene
mm9_v1_chr7_+_86058817_86058936	4.10589	FOX{I1,J2}.p2	AK005528|Isg20|57444|interferon-stimulated protein
mm9_v1_chrX_-_71527052_71527074	4.10079	FOX{I1,J2}.p2	AK009174|Dnase1l1|69537|deoxyribonuclease 1-like 1	NM_027109|Dnase1l1|69537|deoxyribonuclease 1-like 1
mm9_v1_chr1_-_87633103_87633180	4.09584	FOX{I1,J2}.p2	BC052931|A630001G21Rik|319997|RIKEN cDNA A630001G21 gene	AK041324|A630001G21Rik|319997|RIKEN cDNA A630001G21 gene	AK041675|A630001G21Rik|319997|RIKEN cDNA A630001G21 gene	NM_177055|A630001G21Rik|319997|RIKEN cDNA A630001G21 gene
mm9_v1_chr17_-_24580867_24580878	4.07298	FOX{I1,J2}.p2	AK178081|E4f1|13560|E4F transcription factor 1
mm9_v1_chr11_-_109334465_109334613	4.07094	FOX{I1,J2}.p2	AK170472|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	BC017129|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6	NM_134038|Slc16a6|104681|solute carrier family 16 (monocarboxylic acid transporters), member 6
mm9_v1_chr2_-_9800211_9800245	4.0386	FOX{I1,J2}.p2	AK156634|Gata3|14462|GATA binding protein 3	AK053728|Gata3|14462|GATA binding protein 3	AK090089|Gata3|14462|GATA binding protein 3	AK155549|Gata3|14462|GATA binding protein 3	NM_008091|Gata3|14462|GATA binding protein 3
mm9_v1_chr12_+_114782118_114782165	4.0298	FOX{I1,J2}.p2	AY158689|Adam6a|238406|a disintegrin and metallopeptidase domain 6A	NM_174885|Adam6a|238406|a disintegrin and metallopeptidase domain 6A	BC139059|Adam6a|238406|a disintegrin and metallopeptidase domain 6A	BC108387|Adam6a|238406|a disintegrin and metallopeptidase domain 6A
mm9_v1_chr7_-_3671918_3672003	4.01699	FOX{I1,J2}.p2	U96690|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AF148879|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	U83172|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AF148878|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	BC028756|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AF148880|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK161081|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK142375|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK170618|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK152232|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK153116|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK170720|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	U96692|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	AK165255|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	NM_011095|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3	U96693|Lilrb3|18733|leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3
mm9_v1_chr2_+_163978972_163979077	4.01281	FOX{I1,J2}.p2	AK085750|Stk4|58231|serine/threonine kinase 4
mm9_v1_chr13_+_27213566_27213578	4.00796	FOX{I1,J2}.p2	BC064735|Prl3d2|215028|prolactin family 3, subfamily d, member 1	AF525160|Prl3d2|215028|prolactin family 3, subfamily d, member 1	NM_172155|Prl3d2|215028|prolactin family 3, subfamily d, member 1	BC119340|Prl3d2|215028|prolactin family 3, subfamily d, member 1	BC119344|Prl3d2|215028|prolactin family 3, subfamily d, member 1
mm9_v1_chr13_-_77230519_77230547	3.99413	FOX{I1,J2}.p2	BC083095|Ankrd32|105377|ankyrin repeat domain 32
mm9_v1_chr6_+_41488583_41488591	3.9798	FOX{I1,J2}.p2	
mm9_v1_chr5_-_73143979_73144015	3.95362	FOX{I1,J2}.p2	U16145|Txk|22165|TXK tyrosine kinase	AK088209|Txk|22165|TXK tyrosine kinase	AK138069|Txk|22165|TXK tyrosine kinase	AK138786|Txk|22165|TXK tyrosine kinase	NM_001122754|Txk|22165|TXK tyrosine kinase	U19607|Txk|22165|TXK tyrosine kinase
mm9_v1_chr7_-_3629631_3629799	3.95103	FOX{I1,J2}.p2	AK211361|Mboat7|77582|membrane bound O-acyltransferase domain containing 7
mm9_v1_chr5_+_124199713_124199760	3.94732	FOX{I1,J2}.p2	NM_001042421|Kntc1|208628|kinetochore associated 1	AK172905|Kntc1|208628|kinetochore associated 1
mm9_v1_chr13_-_36209100_36209228	3.93063	FOX{I1,J2}.p2	BC080772|Lyrm4|380840|LYR motif containing 4	BC034664|Lyrm4|380840|LYR motif containing 4	AK050553|Lyrm4|380840|LYR motif containing 4	NM_201358|Lyrm4|380840|LYR motif containing 4
mm9_v1_chr3_+_94641626_94641643	3.92714	FOX{I1,J2}.p2	BC085188|Pogz|229584|pogo transposable element with ZNF domain	AK035255|Pogz|229584|pogo transposable element with ZNF domain	AK086062|Pogz|229584|pogo transposable element with ZNF domain	AK161889|Pogz|229584|pogo transposable element with ZNF domain	BC139432|Pogz|229584|pogo transposable element with ZNF domain	BC139433|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr17_-_37095372_37095414	3.92381	FOX{I1,J2}.p2	AK003714|Znrd1|66136|zinc ribbon domain containing, 1	NM_023162|Znrd1|66136|zinc ribbon domain containing, 1	BC043016|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr11_-_100334035_100334069	3.91577	FOX{I1,J2}.p2	AK169910|Klhl11|217194|kelch-like 11 (Drosophila)
mm9_v1_chr4_+_12067460_12067484	3.88984	FOX{I1,J2}.p2	BC050844|Rbm12b|72397|RNA binding motif protein 12B
mm9_v1_chr1_-_140743779_140743951	3.87861	FOX{I1,J2}.p2	AB221560|Lhx9|16876|LIM homeobox protein 9	AK013209|Lhx9|16876|LIM homeobox protein 9
mm9_v1_chr2_-_25221101_25221190	3.87531	FOX{I1,J2}.p2	BC043307|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK077912|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK151942|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	NM_001033293|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK149178|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK168977|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK159787|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	AK077550|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1	BC130030|Uap1l1|227620|UDP-N-acteylglucosamine pyrophosphorylase 1-like 1
mm9_v1_chr9_-_65972570_65972698	3.87453	FOX{I1,J2}.p2	AK155746|Snx1|56440|sorting nexin 1	AK167993|Snx1|56440|sorting nexin 1	BC066189|Snx1|56440|sorting nexin 1	AK154079|Snx1|56440|sorting nexin 1	AK149850|Snx1|56440|sorting nexin 1	AB019214|Snx1|56440|sorting nexin 1	AK167177|Snx1|56440|sorting nexin 1	BC066044|Snx1|56440|sorting nexin 1	AK161241|Snx1|56440|sorting nexin 1	AK168742|Snx1|56440|sorting nexin 1	AF154120|Snx1|56440|sorting nexin 1	NM_019727|Snx1|56440|sorting nexin 1
mm9_v1_chr4_-_82531027_82531054	3.85797	FOX{I1,J2}.p2	AF035579|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	BC145993|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	BC132431|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	AF031896|Cer1|12622|cerberus 1 homolog (Xenopus laevis)	NM_009887|Cer1|12622|cerberus 1 homolog (Xenopus laevis)
mm9_v1_chr14_-_48037815_48037862	3.85503	FOX{I1,J2}.p2	BC058087|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	BC027273|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK129032|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK147955|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK048470|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK085882|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5
mm9_v1_chr9_+_65738168_65738258	3.85362	FOX{I1,J2}.p2	AK011645|2810417H13Rik|68026|RIKEN cDNA 2810417H13 gene	AK017673|2810417H13Rik|68026|RIKEN cDNA 2810417H13 gene	AK011835|2810417H13Rik|68026|RIKEN cDNA 2810417H13 gene	AK013105|2810417H13Rik|68026|RIKEN cDNA 2810417H13 gene	BC021413|2810417H13Rik|68026|RIKEN cDNA 2810417H13 gene	BC096393|2810417H13Rik|68026|RIKEN cDNA 2810417H13 gene	AY496943|2810417H13Rik|68026|RIKEN cDNA 2810417H13 gene
mm9_v1_chr9_+_105299234_105299250	3.84976	FOX{I1,J2}.p2	AK003146|Aste1|66595|asteroid homolog 1 (Drosophila)
mm9_v1_chr10_+_126602182_126602286	3.84056	FOX{I1,J2}.p2	AK144484|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	BC057199|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	NM_008080|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	BC019969|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm9_v1_chr19_-_11124897_11125055	3.84029	FOX{I1,J2}.p2	AK153119|AW112010|107350|expressed sequence AW112010	EF660528|AW112010|107350|expressed sequence AW112010	NM_001177351|AW112010|107350|expressed sequence AW112010
mm9_v1_chr6_+_38868942_38869113	3.81832	FOX{I1,J2}.p2	BC029014|Tbxas1|21391|thromboxane A synthase 1, platelet	NM_011539|Tbxas1|21391|thromboxane A synthase 1, platelet	AK048544|Tbxas1|21391|thromboxane A synthase 1, platelet	AK139479|Tbxas1|21391|thromboxane A synthase 1, platelet	L18868|Tbxas1|21391|thromboxane A synthase 1, platelet
mm9_v1_chr14_-_59797556_59797585	3.81379	FOX{I1,J2}.p2	BC099536|Gm5142|380907|predicted gene 5142	AK076969|Gm5142|380907|predicted gene 5142	NM_001004158|Gm5142|380907|predicted gene 5142
mm9_v1_chr10_-_88875526_88875657	3.80033	FOX{I1,J2}.p2	AK171905|Gas2l3|237436|growth arrest-specific 2 like 3	AK136819|Gas2l3|237436|growth arrest-specific 2 like 3
mm9_v1_chr7_-_25917458_25917515	3.78726	FOX{I1,J2}.p2	AY746974|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC104488|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC105647|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC105920|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC105921|Pou2f2|18987|POU domain, class 2, transcription factor 2	NM_001163554|Pou2f2|18987|POU domain, class 2, transcription factor 2	NM_001163555|Pou2f2|18987|POU domain, class 2, transcription factor 2	NM_001163556|Pou2f2|18987|POU domain, class 2, transcription factor 2	NM_011138|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57936|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57937|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57938|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57939|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57940|Pou2f2|18987|POU domain, class 2, transcription factor 2	X57941|Pou2f2|18987|POU domain, class 2, transcription factor 2	AK156322|Pou2f2|18987|POU domain, class 2, transcription factor 2	BC050258|Pou2f2|18987|POU domain, class 2, transcription factor 2	AY746973|Pou2f2|18987|POU domain, class 2, transcription factor 2
mm9_v1_chr11_-_82642528_82642544	3.77983	FOX{I1,J2}.p2	AY163902|Rffl|67338|ring finger and FYVE like domain containing protein	AK007189|Rffl|67338|ring finger and FYVE like domain containing protein	AK006757|Rffl|67338|ring finger and FYVE like domain containing protein	AK028095|Rffl|67338|ring finger and FYVE like domain containing protein	AK015806|Rffl|67338|ring finger and FYVE like domain containing protein	NM_026097|Rffl|67338|ring finger and FYVE like domain containing protein
mm9_v1_chr12_+_75065534_75065545	3.77784	FOX{I1,J2}.p2	BC030456|Snapc1|75627|small nuclear RNA activating complex, polypeptide 1
mm9_v1_chr11_-_121090513_121090656	3.76878	FOX{I1,J2}.p2	BC026616|BC017643|217370|cDNA sequence BC017643	AK158402|BC017643|217370|cDNA sequence BC017643	AK170767|BC017643|217370|cDNA sequence BC017643	BC017643|BC017643|217370|cDNA sequence BC017643	NM_144832|BC017643|217370|cDNA sequence BC017643	AK159453|BC017643|217370|cDNA sequence BC017643	AK168104|BC017643|217370|cDNA sequence BC017643	BC027406|BC017643|217370|cDNA sequence BC017643	AK145884|BC017643|217370|cDNA sequence BC017643
mm9_v1_chr7_-_4349321_4349345	3.76823	FOX{I1,J2}.p2	AK079424|Gp6|243816|glycoprotein 6 (platelet)	BC138170|Gp6|243816|glycoprotein 6 (platelet)	BC145172|Gp6|243816|glycoprotein 6 (platelet)	NM_001163014|Gp6|243816|glycoprotein 6 (platelet)
mm9_v1_chr15_+_97077537_97077537	3.76537	FOX{I1,J2}.p2	AK051480|Fam113b|239647|family with sequence similarity 113, member B	NM_172293|Fam113b|239647|family with sequence similarity 113, member B
mm9_v1_chr7_-_3796651_3796654	3.75268	FOX{I1,J2}.p2	AK140776|Pira2|18725|paired-Ig-like receptor A2	AK137475|Pira2|18725|paired-Ig-like receptor A2	AK172046|Pira2|18725|paired-Ig-like receptor A2	NM_011089|Pira2|18725|paired-Ig-like receptor A2
mm9_v1_chr15_+_58731646_58731691	3.74956	FOX{I1,J2}.p2	AK016137|Rnf139|75841|ring finger protein 139
mm9_v1_chr12_+_33535650_33535652	3.74728	FOX{I1,J2}.p2	AK004117|Nampt|59027|nicotinamide phosphoribosyltransferase
mm9_v1_chr2_-_120389527_120389553	3.74725	FOX{I1,J2}.p2	BC025424|Zfp106|20402|zinc finger protein 106
mm9_v1_chr11_-_17847399_17847495	3.74042	FOX{I1,J2}.p2	AK018594|Etaa1|68145|Ewing's tumor-associated antigen 1
mm9_v1_chr5_+_148242018_148242155	3.71528	FOX{I1,J2}.p2	NM_028291|Pan3|72587|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm9_v1_chr4_+_154243693_154243744	3.71059	FOX{I1,J2}.p2	AF176569|Mmel1|27390|membrane metallo-endopeptidase-like 1	NM_013783|Mmel1|27390|membrane metallo-endopeptidase-like 1	AF157105|Mmel1|27390|membrane metallo-endopeptidase-like 1
mm9_v1_chr16_+_59148654_59148677	3.70709	FOX{I1,J2}.p2	BC119110|Olfr195|259000|olfactory receptor 195	NM_146998|Olfr195|259000|olfactory receptor 195
mm9_v1_chr1_-_75132977_75133049	3.69508	FOX{I1,J2}.p2	AK209717|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK183285|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK180897|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr3_+_51465095_51465114	3.68901	FOX{I1,J2}.p2	NM_174995|Mgst2|211666|microsomal glutathione S-transferase 2
mm9_v1_chr6_+_83293435_83293444	3.682	FOX{I1,J2}.p2	AK196174|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)
mm9_v1_chr7_-_36322681_36322762	3.67645	FOX{I1,J2}.p2	AK135918|Tdrd12|71981|tudor domain containing 12	AB211061|Tdrd12|71981|tudor domain containing 12	AK010386|Tdrd12|71981|tudor domain containing 12	AK010714|Tdrd12|71981|tudor domain containing 12	NM_028034|Tdrd12|71981|tudor domain containing 12
mm9_v1_chr19_-_4287408_4287579	3.67491	FOX{I1,J2}.p2	AK153543|Adrbk1|110355|adrenergic receptor kinase, beta 1
mm9_v1_chr13_-_55516542_55516592	3.67394	FOX{I1,J2}.p2	EU375560|Pfn3|75477|profilin 3	AK005930|Pfn3|75477|profilin 3	BC048629|Pfn3|75477|profilin 3	NM_029303|Pfn3|75477|profilin 3
mm9_v1_chr9_-_54041231_54041328	3.66405	FOX{I1,J2}.p2	BC103670|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	BC104489|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	D00659|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	NM_007810|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1	AK143323|Cyp19a1|13075|cytochrome P450, family 19, subfamily a, polypeptide 1
mm9_v1_chr16_-_58918311_58918311	3.65948	FOX{I1,J2}.p2	NM_001011662|Olfr180|258178|olfactory receptor 180
mm9_v1_chr16_-_16829386_16829548	3.65493	FOX{I1,J2}.p2	AF173866|Spag6|50525|sperm associated antigen 6	BC090660|Spag6|50525|sperm associated antigen 6	AK053966|Spag6|50525|sperm associated antigen 6	AK005732|Spag6|50525|sperm associated antigen 6	BC100455|Spag6|50525|sperm associated antigen 6	AK054199|Spag6|50525|sperm associated antigen 6	NM_015773|Spag6|50525|sperm associated antigen 6	AK164680|Spag6|50525|sperm associated antigen 6
mm9_v1_chr9_-_61794540_61794605	3.65421	FOX{I1,J2}.p2	AK013939|Kif23|71819|kinesin family member 23	AK164409|Kif23|71819|kinesin family member 23	BC047273|Kif23|71819|kinesin family member 23	BC003363|Kif23|71819|kinesin family member 23	AK030771|Kif23|71819|kinesin family member 23	NM_024245|Kif23|71819|kinesin family member 23
mm9_v1_chr17_+_5341444_5341585	3.62972	FOX{I1,J2}.p2	AK135725|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK033272|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK139800|Arid1b|239985|AT rich interactive domain 1B (SWI-like)
mm9_v1_chr5_-_105722663_105722755	3.62847	FOX{I1,J2}.p2	BC141364|Gbp4|17472|guanylate binding protein 4	BC147434|Gbp4|17472|guanylate binding protein 4	BC007143|Mpa2l|100702|macrophage activation 2 like	BC057969|Mpa2l|100702|macrophage activation 2 like	AK152226|Mpa2l|100702|macrophage activation 2 like	AK128993|Mpa2l|100702|macrophage activation 2 like	BC115768|Mpa2l|100702|macrophage activation 2 like	AK171913|Mpa2l|100702|macrophage activation 2 like	NM_194336|Mpa2l|100702|macrophage activation 2 like
mm9_v1_chr2_+_43604343_43604389	3.62676	FOX{I1,J2}.p2	AK036520|Arhgap15|76117|Rho GTPase activating protein 15	NM_153820|Arhgap15|76117|Rho GTPase activating protein 15	AK170537|Arhgap15|76117|Rho GTPase activating protein 15	NM_001025377|Arhgap15|76117|Rho GTPase activating protein 15	AK041323|Arhgap15|76117|Rho GTPase activating protein 15	AK033620|Arhgap15|76117|Rho GTPase activating protein 15	AK040796|Arhgap15|76117|Rho GTPase activating protein 15	AK172407|Arhgap15|76117|Rho GTPase activating protein 15	BC034881|Arhgap15|76117|Rho GTPase activating protein 15	AK018058|Arhgap15|76117|Rho GTPase activating protein 15	AK031022|Arhgap15|76117|Rho GTPase activating protein 15	BC024887|Arhgap15|76117|Rho GTPase activating protein 15
mm9_v1_chr6_-_65094862_65094901	3.61916	FOX{I1,J2}.p2	D82072|Hpgds|54486|hematopoietic prostaglandin D synthase
mm9_v1_chr15_-_72926936_72926959	3.61104	FOX{I1,J2}.p2	AK003962|1110029L17Rik|68722|RIKEN cDNA 1110029L17 gene
mm9_v1_chr5_-_136450345_136450345	3.60915	FOX{I1,J2}.p2	NM_001160366|Srcrb4d|109267|scavenger receptor cysteine rich domain containing, group B (4 domains)
mm9_v1_chrX_+_103338609_103338616	3.60672	FOX{I1,J2}.p2	AK170044|Tlr13|279572|toll-like receptor 13	AY510706|Tlr13|279572|toll-like receptor 13	NM_205820|Tlr13|279572|toll-like receptor 13
mm9_v1_chr14_+_48092305_48092319	3.60496	FOX{I1,J2}.p2	AK171630|Fbxo34|78938|F-box protein 34
mm9_v1_chr14_+_33647147_33647147	3.59669	FOX{I1,J2}.p2	NM_001164485|Fam170b|105511|family with sequence similarity 170, member B
mm9_v1_chr8_-_124884624_124884645	3.59373	FOX{I1,J2}.p2	BC117988|Trhr2|170732|thyrotropin releasing hormone receptor 2	BC117989|Trhr2|170732|thyrotropin releasing hormone receptor 2	AF283762|Trhr2|170732|thyrotropin releasing hormone receptor 2	NM_133202|Trhr2|170732|thyrotropin releasing hormone receptor 2
mm9_v1_chr2_-_156960826_156961007	3.59195	FOX{I1,J2}.p2	AK128954|Samhd1|56045|SAM domain and HD domain, 1	AK149865|Samhd1|56045|SAM domain and HD domain, 1	AK151335|Samhd1|56045|SAM domain and HD domain, 1	AK153390|Samhd1|56045|SAM domain and HD domain, 1	AK054490|Samhd1|56045|SAM domain and HD domain, 1	AK170688|Samhd1|56045|SAM domain and HD domain, 1	AK171565|Samhd1|56045|SAM domain and HD domain, 1	BC067198|Samhd1|56045|SAM domain and HD domain, 1	U15635|Samhd1|56045|SAM domain and HD domain, 1	BC012721|Samhd1|56045|SAM domain and HD domain, 1	AK078936|Samhd1|56045|SAM domain and HD domain, 1	NM_001139520|Samhd1|56045|SAM domain and HD domain, 1	NM_018851|Samhd1|56045|SAM domain and HD domain, 1
mm9_v1_chr11_+_117127762_117127806	3.5875	FOX{I1,J2}.p2	AK122415|Sept9|53860|septin 9
mm9_v1_chr17_-_37095420_37095443	3.57394	FOX{I1,J2}.p2	AK005976|Znrd1|66136|zinc ribbon domain containing, 1	AK019152|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr4_+_150302107_150302108	3.5681	FOX{I1,J2}.p2	NM_001077509|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9	AK154625|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9
mm9_v1_chr12_-_104681842_104681891	3.56235	FOX{I1,J2}.p2	AY090098|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	AK040279|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	AK160503|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	BC086889|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	BC100588|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A	NM_029803|Ifi27l2a|76933|interferon, alpha-inducible protein 27 like 2A
mm9_v1_chr13_+_27893522_27893571	3.55607	FOX{I1,J2}.p2	AB032428|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AF234636|Prl2a1|56635|prolactin family 2, subfamily a, member 1	NM_019991|Prl2a1|56635|prolactin family 2, subfamily a, member 1	BC099458|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AK005424|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AF226610|Prl2a1|56635|prolactin family 2, subfamily a, member 1	AF272368|Prl2a1|56635|prolactin family 2, subfamily a, member 1
mm9_v1_chr10_-_3557441_3557947	3.5533	FOX{I1,J2}.p2	AY397681|Oprm1|18390|opioid receptor, mu 1	AF062754|Oprm1|18390|opioid receptor, mu 1	DQ363376|Oprm1|18390|opioid receptor, mu 1	DQ363377|Oprm1|18390|opioid receptor, mu 1	AB441734|Oprm1|18390|opioid receptor, mu 1	AB441735|Oprm1|18390|opioid receptor, mu 1	AB441736|Oprm1|18390|opioid receptor, mu 1	AB441737|Oprm1|18390|opioid receptor, mu 1	AB441738|Oprm1|18390|opioid receptor, mu 1	AB441739|Oprm1|18390|opioid receptor, mu 1	AB441740|Oprm1|18390|opioid receptor, mu 1	AB441741|Oprm1|18390|opioid receptor, mu 1	AB441742|Oprm1|18390|opioid receptor, mu 1	AB441743|Oprm1|18390|opioid receptor, mu 1	AK038389|Oprm1|18390|opioid receptor, mu 1	AF062753|Oprm1|18390|opioid receptor, mu 1	AF074973|Oprm1|18390|opioid receptor, mu 1	AF074974|Oprm1|18390|opioid receptor, mu 1	AF167565|Oprm1|18390|opioid receptor, mu 1	AF167566|Oprm1|18390|opioid receptor, mu 1	AF167567|Oprm1|18390|opioid receptor, mu 1	AF167568|Oprm1|18390|opioid receptor, mu 1	AF346812|Oprm1|18390|opioid receptor, mu 1	AF346813|Oprm1|18390|opioid receptor, mu 1	AF346814|Oprm1|18390|opioid receptor, mu 1	AY036621|Oprm1|18390|opioid receptor, mu 1	AY160190|Oprm1|18390|opioid receptor, mu 1	AY923181|Oprm1|18390|opioid receptor, mu 1	AY923183|Oprm1|18390|opioid receptor, mu 1	BC119545|Oprm1|18390|opioid receptor, mu 1	DQ868787|Oprm1|18390|opioid receptor, mu 1	DQ868788|Oprm1|18390|opioid receptor, mu 1	EF105311|Oprm1|18390|opioid receptor, mu 1	EF105312|Oprm1|18390|opioid receptor, mu 1	EF105313|Oprm1|18390|opioid receptor, mu 1	EF105314|Oprm1|18390|opioid receptor, mu 1	AY923182|Oprm1|18390|opioid receptor, mu 1	AB047546|Oprm1|18390|opioid receptor, mu 1	U19380|Oprm1|18390|opioid receptor, mu 1	NM_001039652|Oprm1|18390|opioid receptor, mu 1	U26915|Oprm1|18390|opioid receptor, mu 1
mm9_v1_chr8_-_23272965_23272967	3.55309	FOX{I1,J2}.p2	NM_001162947|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3	AF093416|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3
mm9_v1_chr6_-_3349415_3349463	3.54908	FOX{I1,J2}.p2	AK172649|Samd9l|209086|sterile alpha motif domain containing 9-like
mm9_v1_chr13_+_113450958_113450993	3.54668	FOX{I1,J2}.p2	AK020109|Slc38a9|268706|solute carrier family 38, member 9	BC052361|Slc38a9|268706|solute carrier family 38, member 9	NM_178746|Slc38a9|268706|solute carrier family 38, member 9	AK044735|Slc38a9|268706|solute carrier family 38, member 9	AK043402|Slc38a9|268706|solute carrier family 38, member 9	AK034958|Slc38a9|268706|solute carrier family 38, member 9	AK039821|Slc38a9|268706|solute carrier family 38, member 9
mm9_v1_chr18_+_60963495_60963509	3.54139	FOX{I1,J2}.p2	AK002232|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	AK020607|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	NM_001042605|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	NM_010545|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	BC003476|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	BC096435|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	X07129|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)
mm9_v1_chr10_+_80611198_80611320	3.53103	FOX{I1,J2}.p2	AK078088|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr17_+_43407277_43407295	3.53024	FOX{I1,J2}.p2	BC019217|Gpr110|77596|G protein-coupled receptor 110	AK019869|Gpr110|77596|G protein-coupled receptor 110	NM_133776|Gpr110|77596|G protein-coupled receptor 110
mm9_v1_chr19_-_6986037_6986245	3.52783	FOX{I1,J2}.p2	AK008536|Esrra|26379|estrogen related receptor, alpha	BC052930|Esrra|26379|estrogen related receptor, alpha
mm9_v1_chr15_+_76531891_76531971	3.52236	FOX{I1,J2}.p2	AK009269|Mfsd3|69572|major facilitator superfamily domain containing 3	BC085305|Mfsd3|69572|major facilitator superfamily domain containing 3	AK089539|Mfsd3|69572|major facilitator superfamily domain containing 3	NM_027122|Mfsd3|69572|major facilitator superfamily domain containing 3
mm9_v1_chr1_-_75139207_75139284	3.51211	FOX{I1,J2}.p2	AK169779|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK145962|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr17_+_34781733_34781827	3.49689	FOX{I1,J2}.p2	AK146018|Fkbpl|56299|FK506 binding protein-like	BC046338|Fkbpl|56299|FK506 binding protein-like	NM_019873|Fkbpl|56299|FK506 binding protein-like
mm9_v1_chr11_+_117623703_117623821	3.49242	FOX{I1,J2}.p2	AK137381|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr13_+_27437541_27437557	3.49133	FOX{I1,J2}.p2	AK131668|Prl8a2|13529|prolactin family 8, subfamily a, member 2	AK146049|Prl8a2|13529|prolactin family 8, subfamily a, member 2	BC061150|Prl8a2|13529|prolactin family 8, subfamily a, member 2	AF015729|Prl8a2|13529|prolactin family 8, subfamily a, member 2	AF011385|Prl8a2|13529|prolactin family 8, subfamily a, member 2	NM_010088|Prl8a2|13529|prolactin family 8, subfamily a, member 2
mm9_v1_chr8_-_3926756_3926840	3.48671	FOX{I1,J2}.p2	AK007656|Cd209b|69165|CD209b antigen	AF374471|Cd209b|69165|CD209b antigen	NM_001037800|Cd209b|69165|CD209b antigen	AF424796|Cd209b|69165|CD209b antigen	AF424790|Cd209b|69165|CD209b antigen	AF424791|Cd209b|69165|CD209b antigen	AF424792|Cd209b|69165|CD209b antigen	AF424793|Cd209b|69165|CD209b antigen	AF424797|Cd209b|69165|CD209b antigen	AF424799|Cd209b|69165|CD209b antigen	AF422108|Cd209b|69165|CD209b antigen	AK138999|Cd209b|69165|CD209b antigen	NM_026972|Cd209b|69165|CD209b antigen	AF373409|Cd209b|69165|CD209b antigen	AF424795|Cd209b|69165|CD209b antigen	AF424794|Cd209b|69165|CD209b antigen	AF424798|Cd209b|69165|CD209b antigen	AF424803|Cd209b|69165|CD209b antigen
mm9_v1_chr8_+_34887177_34887229	3.47589	FOX{I1,J2}.p2	AK178391|Gtf2e2|68153|general transcription factor II E, polypeptide 2 (beta subunit)
mm9_v1_chr6_+_57531124_57531158	3.47386	FOX{I1,J2}.p2	AK017888|Herc6|67138|hect domain and RLD 6
mm9_v1_chr8_+_19198703_19198732	3.47213	FOX{I1,J2}.p2	NM_019728|Defb4|56519|defensin beta 4	AK009061|Defb4|56519|defensin beta 4	AK009306|Defb4|56519|defensin beta 4	BC099882|Defb4|56519|defensin beta 4	BC099883|Defb4|56519|defensin beta 4	BC100674|Defb4|56519|defensin beta 4	BC100675|Defb4|56519|defensin beta 4	AF155882|Defb4|56519|defensin beta 4	AF318068|Defb5|81007|defensin beta 5
mm9_v1_chr9_+_45715013_45715102	3.46767	FOX{I1,J2}.p2	AK165389|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	AK151980|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	AK148416|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	BC007322|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	U48830|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7
mm9_v1_chr13_+_24506990_24507004	3.45594	FOX{I1,J2}.p2	AK166486|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	AK145199|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	NM_007717|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase	BC055079|Cmah|12763|cytidine monophospho-N-acetylneuraminic acid hydroxylase
mm9_v1_chr7_+_75418724_75418724	3.45353	FOX{I1,J2}.p2	NM_001013811|Fam169b|434197|family with sequence similarity 169, member B
mm9_v1_chr16_+_91373008_91373145	3.44592	FOX{I1,J2}.p2	NM_001110498|Ifnar2|15976|interferon (alpha and beta) receptor 2	NM_010509|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK139169|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK010952|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK003185|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK150386|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK152878|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK153317|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK151474|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK151777|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK151493|Ifnar2|15976|interferon (alpha and beta) receptor 2	AK150597|Ifnar2|15976|interferon (alpha and beta) receptor 2	Y09864|Ifnar2|15976|interferon (alpha and beta) receptor 2	Y09865|Ifnar2|15976|interferon (alpha and beta) receptor 2
mm9_v1_chr11_+_83251195_83251208	3.43314	FOX{I1,J2}.p2	AK006174|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene	NM_025492|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene	AK005809|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene	BC152320|1700020L24Rik|66330|RIKEN cDNA 1700020L24 gene
mm9_v1_chr5_-_92738919_92738964	3.4286	FOX{I1,J2}.p2	AK160646|Sdad1|231452|SDA1 domain containing 1
mm9_v1_chr12_+_75065510_75065528	3.41252	FOX{I1,J2}.p2	AK152833|Snapc1|75627|small nuclear RNA activating complex, polypeptide 1	AK138261|Snapc1|75627|small nuclear RNA activating complex, polypeptide 1	NM_178392|Snapc1|75627|small nuclear RNA activating complex, polypeptide 1
mm9_v1_chr5_-_141476424_141476542	3.40764	FOX{I1,J2}.p2	AK002346|Card11|108723|caspase recruitment domain family, member 11	AY135367|Card11|108723|caspase recruitment domain family, member 11	BC096592|Card11|108723|caspase recruitment domain family, member 11
mm9_v1_chr6_+_113339088_113339253	3.40687	FOX{I1,J2}.p2	AK003923|Arpc4|68089|actin related protein 2/3 complex, subunit 4	AK029462|Ttll3|101100|tubulin tyrosine ligase-like family, member 3	NM_001142732|Ttll3|101100|tubulin tyrosine ligase-like family, member 3
mm9_v1_chr9_-_53012444_53012529	3.4029	FOX{I1,J2}.p2	AK166787|Ddx10|77591|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
mm9_v1_chr11_-_81387006_81387040	3.40048	FOX{I1,J2}.p2	BC139179|1700071K01Rik|237880|RIKEN cDNA 1700071K01 gene	BC139181|1700071K01Rik|237880|RIKEN cDNA 1700071K01 gene	AK131752|1700071K01Rik|237880|RIKEN cDNA 1700071K01 gene	NM_001033765|1700071K01Rik|237880|RIKEN cDNA 1700071K01 gene
mm9_v1_chr5_+_115373333_115373385	3.39998	FOX{I1,J2}.p2	AK089111|Oasl1|231655|2'-5' oligoadenylate synthetase-like 1
mm9_v1_chr6_+_121195885_121196041	3.38926	FOX{I1,J2}.p2	AK151011|Usp18|24110|ubiquitin specific peptidase 18	AK151260|Usp18|24110|ubiquitin specific peptidase 18	AK151722|Usp18|24110|ubiquitin specific peptidase 18	NM_011909|Usp18|24110|ubiquitin specific peptidase 18	AK149772|Usp18|24110|ubiquitin specific peptidase 18	AK004296|Usp18|24110|ubiquitin specific peptidase 18	AK153312|Usp18|24110|ubiquitin specific peptidase 18	AK152034|Usp18|24110|ubiquitin specific peptidase 18	AK152574|Usp18|24110|ubiquitin specific peptidase 18	AF069502|Usp18|24110|ubiquitin specific peptidase 18	BC138562|Usp18|24110|ubiquitin specific peptidase 18	BC138577|Usp18|24110|ubiquitin specific peptidase 18
mm9_v1_chr8_+_96996662_96996662	3.3843	FOX{I1,J2}.p2	FJ889356|Nlrc5|434341|NLR family, CARD domain containing 5	NM_001033207|Nlrc5|434341|NLR family, CARD domain containing 5
mm9_v1_chr7_+_111367306_111367377	3.36338	FOX{I1,J2}.p2	AK040000|Trim6|94088|tripartite motif-containing 6	NM_001013616|Trim6|94088|tripartite motif-containing 6	AK021253|Trim6|94088|tripartite motif-containing 6	AK033396|Trim6|94088|tripartite motif-containing 6	AK049238|Trim6|94088|tripartite motif-containing 6	BC138965|Trim6|94088|tripartite motif-containing 6
mm9_v1_chr3_+_67406958_67407063	3.36149	FOX{I1,J2}.p2	AK171855|Mfsd1|66868|major facilitator superfamily domain containing 1
mm9_v1_chr12_+_11272852_11273004	3.36125	FOX{I1,J2}.p2	AK220488|Smc6|67241|structural maintenance of chromosomes 6	AK148478|Smc6|67241|structural maintenance of chromosomes 6	AK012626|Smc6|67241|structural maintenance of chromosomes 6	BC048790|Smc6|67241|structural maintenance of chromosomes 6	AK088002|Smc6|67241|structural maintenance of chromosomes 6	AK135873|Smc6|67241|structural maintenance of chromosomes 6	AK009009|Smc6|67241|structural maintenance of chromosomes 6	AK011982|Smc6|67241|structural maintenance of chromosomes 6	AK050341|Smc6|67241|structural maintenance of chromosomes 6	BC099955|Smc6|67241|structural maintenance of chromosomes 6
mm9_v1_chr14_+_70945119_70945160	3.36117	FOX{I1,J2}.p2	AK012301|Reep4|72549|receptor accessory protein 4
mm9_v1_chrX_+_99314793_99314850	3.35218	FOX{I1,J2}.p2	BC119355|Pin4|69713|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	BC119357|Pin4|69713|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	NM_027181|Pin4|69713|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)	AK010338|Pin4|69713|protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting, 4 (parvulin)
mm9_v1_chr11_-_98859189_98859196	3.35054	FOX{I1,J2}.p2	U01915|Top2a|21973|topoisomerase (DNA) II alpha
mm9_v1_chr2_-_106810547_106810547	3.34463	FOX{I1,J2}.p2	AK076781|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene	NM_173750|2700007P21Rik|212772|RIKEN cDNA 2700007P21 gene
mm9_v1_chr13_-_35011860_35011863	3.34201	FOX{I1,J2}.p2	NM_027967|1700026J04Rik|71864|RIKEN cDNA 1700026J04 gene	AK139828|1700026J04Rik|71864|RIKEN cDNA 1700026J04 gene
mm9_v1_chr4_-_19849712_19849751	3.32078	FOX{I1,J2}.p2	AY145896|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	NM_175406|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK075745|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2
mm9_v1_chr1_-_20793592_20793721	3.31831	FOX{I1,J2}.p2	AK219838|Mcm3|17215|minichromosome maintenance deficient 3 (S. cerevisiae)
mm9_v1_chr6_-_130287518_130287643	3.31785	FOX{I1,J2}.p2	U56404|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U56405|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC101952|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103543|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103544|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC103545|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC132524|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC132526|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC145192|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	BC145193|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U10305|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	AK159595|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U49868|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	NM_010648|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3	U09739|Klra3|16634|killer cell lectin-like receptor, subfamily A, member 3
mm9_v1_chr6_-_113550646_113550708	3.31665	FOX{I1,J2}.p2	AK016461|4931417G12Rik|70979|RIKEN cDNA 4931417G12 gene	BC049660|4931417G12Rik|70979|RIKEN cDNA 4931417G12 gene	NM_027633|4931417G12Rik|70979|RIKEN cDNA 4931417G12 gene
mm9_v1_chr4_-_6202747_6202782	3.31157	FOX{I1,J2}.p2	BC130261|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050020|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050220|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050260|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	NM_007824|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050210|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1
mm9_v1_chr11_-_100334076_100334121	3.30521	FOX{I1,J2}.p2	BC111873|Klhl11|217194|kelch-like 11 (Drosophila)	AK029101|Klhl11|217194|kelch-like 11 (Drosophila)	NM_172565|Klhl11|217194|kelch-like 11 (Drosophila)
mm9_v1_chr8_+_86239131_86239208	3.29602	FOX{I1,J2}.p2	AK146294|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK145927|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK150997|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK172448|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK012002|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK016960|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK149475|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK151395|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK152394|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK137114|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	BC020134|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK164289|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK168079|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39	AK167890|Ddx39|68278|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39
mm9_v1_chr18_+_37607310_37607496	3.29449	FOX{I1,J2}.p2	AK032156|Pcdhb14|93885|protocadherin beta 14	NM_053139|Pcdhb14|93885|protocadherin beta 14	AK008662|Pcdhb14|93885|protocadherin beta 14	BC059821|Pcdhb14|93885|protocadherin beta 14	AK083065|Pcdhb14|93885|protocadherin beta 14	AY013775|Pcdhb14|93885|protocadherin beta 14
mm9_v1_chr11_-_99520272_99520272	3.28569	FOX{I1,J2}.p2	NM_001126320|Gm11563|100040248|predicted gene 11563
mm9_v1_chr17_-_71201055_71201077	3.28431	FOX{I1,J2}.p2	BC012700|Tgif1|21815|TGFB-induced factor homeobox 1	NM_001164075|Tgif1|21815|TGFB-induced factor homeobox 1
mm9_v1_chr3_+_51465127_51465166	3.2833	FOX{I1,J2}.p2	BC132234|Mgst2|211666|microsomal glutathione S-transferase 2	BC132260|Mgst2|211666|microsomal glutathione S-transferase 2	BC145529|Mgst2|211666|microsomal glutathione S-transferase 2	BC028535|Mgst2|211666|microsomal glutathione S-transferase 2
mm9_v1_chrX_-_5897723_5897841	3.28287	FOX{I1,J2}.p2	AF082348|Bmp15|12155|bone morphogenetic protein 15	AK135757|Bmp15|12155|bone morphogenetic protein 15	AK139936|Bmp15|12155|bone morphogenetic protein 15	BC055363|Bmp15|12155|bone morphogenetic protein 15	AK139773|Bmp15|12155|bone morphogenetic protein 15	AK139847|Bmp15|12155|bone morphogenetic protein 15	NM_009757|Bmp15|12155|bone morphogenetic protein 15	AK135882|Bmp15|12155|bone morphogenetic protein 15
mm9_v1_chr2_-_164653995_164654033	3.27762	FOX{I1,J2}.p2	BC116354|1700020C07Rik|75642|RIKEN cDNA 1700020C07 gene	BC116355|1700020C07Rik|75642|RIKEN cDNA 1700020C07 gene	AK006145|1700020C07Rik|75642|RIKEN cDNA 1700020C07 gene	NM_029370|1700020C07Rik|75642|RIKEN cDNA 1700020C07 gene
mm9_v1_chrX_+_46048180_46048269	3.27551	FOX{I1,J2}.p2	AK076115|Rbmx2|209003|RNA binding motif protein, X-linked 2	NM_173376|Rbmx2|209003|RNA binding motif protein, X-linked 2	AK160232|Rbmx2|209003|RNA binding motif protein, X-linked 2	BC026976|Rbmx2|209003|RNA binding motif protein, X-linked 2	AK168018|Rbmx2|209003|RNA binding motif protein, X-linked 2
mm9_v1_chr6_-_65094691_65094750	3.27202	FOX{I1,J2}.p2	BC116735|Hpgds|54486|hematopoietic prostaglandin D synthase	BC116737|Hpgds|54486|hematopoietic prostaglandin D synthase	AK020246|Hpgds|54486|hematopoietic prostaglandin D synthase	AK039392|Hpgds|54486|hematopoietic prostaglandin D synthase	NM_019455|Hpgds|54486|hematopoietic prostaglandin D synthase
mm9_v1_chr2_+_103810274_103810481	3.26293	FOX{I1,J2}.p2	AK013416|Lmo2|16909|LIM domain only 2	BC057880|Lmo2|16909|LIM domain only 2	NM_001142335|Lmo2|16909|LIM domain only 2	NM_008505|Lmo2|16909|LIM domain only 2
mm9_v1_chrY_-_133778_133851	3.25588	FOX{I1,J2}.p2	X14382|Zfy1|22767|zinc finger protein 1, Y linked	AK076618|Zfy1|22767|zinc finger protein 1, Y linked	NM_009570|Zfy1|22767|zinc finger protein 1, Y linked
mm9_v1_chr18_-_36926866_36926900	3.25465	FOX{I1,J2}.p2	
mm9_v1_chr11_-_86171026_86171057	3.25058	FOX{I1,J2}.p2	NM_001080931|Med13|327987|mediator complex subunit 13
mm9_v1_chr11_-_69495447_69495585	3.23819	FOX{I1,J2}.p2	NM_030702|Senp3|80886|SUMO/sentrin specific peptidase 3	AK088608|Senp3|80886|SUMO/sentrin specific peptidase 3	NM_001163571|Senp3|80886|SUMO/sentrin specific peptidase 3
mm9_v1_chr6_-_3349470_3349570	3.22782	FOX{I1,J2}.p2	BC079894|Samd9l|209086|sterile alpha motif domain containing 9-like	AK052535|Samd9l|209086|sterile alpha motif domain containing 9-like	NM_010156|Samd9l|209086|sterile alpha motif domain containing 9-like
mm9_v1_chr5_-_145962668_145962756	3.22735	FOX{I1,J2}.p2	BC099448|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	BC141244|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	U62906|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	BC027512|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	AK153972|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	AK013258|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	AK009842|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	AK138775|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	NM_023322|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14
mm9_v1_chr8_+_97541591_97541631	3.2273	FOX{I1,J2}.p2	NM_173036|Gpr97|54672|G protein-coupled receptor 97	AK154648|Gpr97|54672|G protein-coupled receptor 97	AK155164|Gpr97|54672|G protein-coupled receptor 97	BC064726|Gpr97|54672|G protein-coupled receptor 97
mm9_v1_chr4_-_19849637_19849704	3.22533	FOX{I1,J2}.p2	AK089507|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	BC087899|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170578|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170659|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AB088358|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170405|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK170072|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AK137586|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2	AY517482|Atp6v0d2|242341|ATPase, H+ transporting, lysosomal V0 subunit D2
mm9_v1_chr11_-_34647016_34647097	3.22423	FOX{I1,J2}.p2	AK139553|Ccdc99|70385|coiled-coil domain containing 99	AK163303|Ccdc99|70385|coiled-coil domain containing 99
mm9_v1_chr5_+_25021884_25021967	3.21933	FOX{I1,J2}.p2	AK133375|Cct8l1|242891|chaperonin containing TCP1, subunit 8 (theta)-like 1	NM_198621|Cct8l1|242891|chaperonin containing TCP1, subunit 8 (theta)-like 1	BC050797|Cct8l1|242891|chaperonin containing TCP1, subunit 8 (theta)-like 1
mm9_v1_chr17_+_40948047_40948124	3.2015	FOX{I1,J2}.p2	AK157847|Rhag|19743|Rhesus blood group-associated A glycoprotein	AF057526|Rhag|19743|Rhesus blood group-associated A glycoprotein	AK143851|Rhag|19743|Rhesus blood group-associated A glycoprotein	NM_011269|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC101941|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC101942|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC103512|Rhag|19743|Rhesus blood group-associated A glycoprotein	BC103662|Rhag|19743|Rhesus blood group-associated A glycoprotein	AB015192|Rhag|19743|Rhesus blood group-associated A glycoprotein	AF065395|Rhag|19743|Rhesus blood group-associated A glycoprotein
mm9_v1_chr11_+_120466872_120466883	3.19312	FOX{I1,J2}.p2	AK205961|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr3_+_142283605_142283716	3.18802	FOX{I1,J2}.p2	BC032882|Gbp2|14469|guanylate binding protein 2	AF077007|Gbp2|14469|guanylate binding protein 2	NM_010260|Gbp2|14469|guanylate binding protein 2	BC011336|Gbp2|14469|guanylate binding protein 2	AJ007970|Gbp2|14469|guanylate binding protein 2	BC049141|Gbp2|14469|guanylate binding protein 2	AF109168|Gbp2|14469|guanylate binding protein 2	AK150138|Gbp2|14469|guanylate binding protein 2
mm9_v1_chr7_+_5626205_5626228	3.18522	FOX{I1,J2}.p2	AF324867|Vmn1r62|81016|vomeronasal 1 receptor 62	NM_030741|Vmn1r62|81016|vomeronasal 1 receptor 62	BC113757|Vmn1r62|81016|vomeronasal 1 receptor 62
mm9_v1_chr11_-_99464621_99464621	3.18308	FOX{I1,J2}.p2	NM_001127354|Gm11938|100041412|predicted gene 11938
mm9_v1_chr9_-_82868992_82869032	3.15945	FOX{I1,J2}.p2	AJ303103|Phip|83946|pleckstrin homology domain interacting protein	AB049460|Phip|83946|pleckstrin homology domain interacting protein	BC037036|Phip|83946|pleckstrin homology domain interacting protein	AK044935|Phip|83946|pleckstrin homology domain interacting protein	BC049950|Phip|83946|pleckstrin homology domain interacting protein	AK049736|Phip|83946|pleckstrin homology domain interacting protein	AK136530|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr1_-_175810248_175810365	3.15938	FOX{I1,J2}.p2	AK136391|Mndal|100040462|myeloid nuclear differentiation antigen like	NM_001170853|Mndal|100040462|myeloid nuclear differentiation antigen like
mm9_v1_chr2_-_33323966_33324113	3.14157	FOX{I1,J2}.p2	AK206442|Zbtb43|71834|zinc finger and BTB domain containing 43	AK212293|Zbtb43|71834|zinc finger and BTB domain containing 43	AK122277|Zbtb43|71834|zinc finger and BTB domain containing 43	AK005818|Zbtb43|71834|zinc finger and BTB domain containing 43	AK147806|Zbtb43|71834|zinc finger and BTB domain containing 43	BC043117|Zbtb43|71834|zinc finger and BTB domain containing 43	NM_001025594|Zbtb43|71834|zinc finger and BTB domain containing 43	NM_027947|Zbtb43|71834|zinc finger and BTB domain containing 43
mm9_v1_chr2_-_51816123_51816173	3.139	FOX{I1,J2}.p2	CT010361|Nmi|64685|N-myc (and STAT) interactor
mm9_v1_chr7_-_16457733_16457733	3.13704	FOX{I1,J2}.p2	AK139691|Crx|12951|cone-rod homeobox containing gene	NM_001113330|Crx|12951|cone-rod homeobox containing gene
mm9_v1_chr11_+_67346499_67346579	3.1365	FOX{I1,J2}.p2	NM_008088|Gas7|14457|growth arrest specific 7	BC120528|Gas7|14457|growth arrest specific 7	BC120530|Gas7|14457|growth arrest specific 7
mm9_v1_chr13_+_67295437_67295470	3.13099	FOX{I1,J2}.p2	NM_001048204|Zfp455|218311|zinc finger protein 455	AK028336|Zfp455|218311|zinc finger protein 455
mm9_v1_chr10_-_18506598_18506598	3.10983	FOX{I1,J2}.p2	AK030207|Gm4922|237300|predicted gene 4922	NM_177706|Gm4922|237300|predicted gene 4922
mm9_v1_chr14_-_48037874_48037887	3.09699	FOX{I1,J2}.p2	AK164575|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK036384|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	AK135820|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5
mm9_v1_chr13_-_12892317_12892348	3.08822	FOX{I1,J2}.p2	BC100299|Prl2c4|26421|prolactin family 2, subfamily c, member 4	BC058816|Prl2c4|26421|prolactin family 2, subfamily c, member 4	NM_011954|Prl2c4|26421|prolactin family 2, subfamily c, member 4	BC064772|Prl2c4|26421|prolactin family 2, subfamily c, member 4	BC132078|Prl2c3|18812|prolactin family 2, subfamily c, member 3	BC132080|Prl2c3|18812|prolactin family 2, subfamily c, member 3	AK145995|Prl2c3|18812|prolactin family 2, subfamily c, member 3	K03235|Prl2c3|18812|prolactin family 2, subfamily c, member 3	AK164068|Prl2c3|18812|prolactin family 2, subfamily c, member 3	NM_011118|Prl2c3|18812|prolactin family 2, subfamily c, member 3
mm9_v1_chr11_+_3190334_3190510	3.08442	FOX{I1,J2}.p2	AK166189|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	BC043035|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	AB029397|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1	NM_019574|Patz1|56218|POZ (BTB) and AT hook containing zinc finger 1
mm9_v1_chr4_+_46485096_46485220	3.08394	FOX{I1,J2}.p2	
mm9_v1_chr12_-_86113816_86113911	3.07792	FOX{I1,J2}.p2	AB021289|Npc2|67963|Niemann Pick type C2	AK149805|Npc2|67963|Niemann Pick type C2	AK151067|Npc2|67963|Niemann Pick type C2	AK154838|Npc2|67963|Niemann Pick type C2	AK008603|Npc2|67963|Niemann Pick type C2	AK151133|Npc2|67963|Niemann Pick type C2	AK152236|Npc2|67963|Niemann Pick type C2	AK153020|Npc2|67963|Niemann Pick type C2	AK153203|Npc2|67963|Niemann Pick type C2	AK167869|Npc2|67963|Niemann Pick type C2	AK170327|Npc2|67963|Niemann Pick type C2	BC003471|Npc2|67963|Niemann Pick type C2	AK165263|Npc2|67963|Niemann Pick type C2	AK009127|Npc2|67963|Niemann Pick type C2	AK159154|Npc2|67963|Niemann Pick type C2	BC007190|Npc2|67963|Niemann Pick type C2	AK012239|Npc2|67963|Niemann Pick type C2
mm9_v1_chr13_-_113891176_113891188	3.07754	FOX{I1,J2}.p2	M26183|Gzma|14938|granzyme A	AK146132|Gzma|14938|granzyme A	AK156728|Gzma|14938|granzyme A	X14799|Gzma|14938|granzyme A	BC061146|Gzma|14938|granzyme A	NM_010370|Gzma|14938|granzyme A
mm9_v1_chr13_-_61037960_61037985	3.07517	FOX{I1,J2}.p2	NM_007796|Ctla2a|13024|cytotoxic T lymphocyte-associated protein 2 alpha
mm9_v1_chr11_-_79056525_79056525	3.07266	FOX{I1,J2}.p2	AK048511|Wsb1|78889|WD repeat and SOCS box-containing 1	NM_001042565|Wsb1|78889|WD repeat and SOCS box-containing 1
mm9_v1_chr10_-_126719287_126719357	3.07112	FOX{I1,J2}.p2	AK034474|Mbd6|110962|methyl-CpG binding domain protein 6
mm9_v1_chr6_-_38249209_38249350	3.06404	FOX{I1,J2}.p2	AK084475|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK045287|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK051064|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	NM_172467|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138180|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138181|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like
mm9_v1_chr4_-_63064369_63064478	3.0614	FOX{I1,J2}.p2	AK170885|Akna|100182|AT-hook transcription factor	AK129468|Akna|100182|AT-hook transcription factor	AK089194|Akna|100182|AT-hook transcription factor	AK159547|Akna|100182|AT-hook transcription factor	NM_001045514|Akna|100182|AT-hook transcription factor
mm9_v1_chr8_-_124999921_124999977	3.05583	FOX{I1,J2}.p2	AK079883|Rnf166|68718|ring finger protein 166	BC131924|Rnf166|68718|ring finger protein 166	BC132281|Rnf166|68718|ring finger protein 166	AK151813|Rnf166|68718|ring finger protein 166	NM_001033142|Rnf166|68718|ring finger protein 166
mm9_v1_chr10_-_126807486_126807599	3.05299	FOX{I1,J2}.p2	BC026140|Inhbc|16325|inhibin beta-C	X90819|Inhbc|16325|inhibin beta-C	NM_010565|Inhbc|16325|inhibin beta-C	U95962|Inhbc|16325|inhibin beta-C
mm9_v1_chr2_+_170111212_170111359	3.05219	FOX{I1,J2}.p2	
mm9_v1_chr5_-_74023659_74023666	3.05096	FOX{I1,J2}.p2	BC031901|Lrrc66|231296|leucine rich repeat containing 66	NM_153568|Lrrc66|231296|leucine rich repeat containing 66	AK051875|Lrrc66|231296|leucine rich repeat containing 66
mm9_v1_chr17_+_74898763_74898780	3.04278	FOX{I1,J2}.p2	AK086213|Yipf4|67864|Yip1 domain family, member 4
mm9_v1_chr3_-_88262982_88263022	3.03719	FOX{I1,J2}.p2	NM_001163490|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr9_-_106378454_106378490	3.0368	FOX{I1,J2}.p2	BC058754|Parp3|235587|poly (ADP-ribose) polymerase family, member 3
mm9_v1_chr2_-_84265422_84265424	3.03597	FOX{I1,J2}.p2	AK137210|Calcrl|54598|calcitonin receptor-like	NM_018782|Calcrl|54598|calcitonin receptor-like	AB015595|Calcrl|54598|calcitonin receptor-like
mm9_v1_chr8_-_4779533_4779566	3.01097	FOX{I1,J2}.p2	AF017152|Shcbp1|20419|Shc SH2-domain binding protein 1	NM_011369|Shcbp1|20419|Shc SH2-domain binding protein 1	AK162943|Shcbp1|20419|Shc SH2-domain binding protein 1	AK149580|Shcbp1|20419|Shc SH2-domain binding protein 1	AK137496|Shcbp1|20419|Shc SH2-domain binding protein 1	BC070455|Shcbp1|20419|Shc SH2-domain binding protein 1	AK144966|Shcbp1|20419|Shc SH2-domain binding protein 1	AK052944|Shcbp1|20419|Shc SH2-domain binding protein 1	AK051205|Shcbp1|20419|Shc SH2-domain binding protein 1
mm9_v1_chrX_-_138159759_138159833	3.01041	FOX{I1,J2}.p2	BC060235|Irs4|16370|insulin receptor substrate 4	NM_010572|Irs4|16370|insulin receptor substrate 4	BC150782|Irs4|16370|insulin receptor substrate 4
mm9_v1_chr16_+_56075506_56075529	3.00681	FOX{I1,J2}.p2	AK040314|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003971|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003972|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003973|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_025483|Senp7|66315|SUMO1/sentrin specific peptidase 7
mm9_v1_chr6_-_119367498_119367553	2.99903	FOX{I1,J2}.p2	BC064109|Adipor2|68465|adiponectin receptor 2	AY424291|Adipor2|68465|adiponectin receptor 2	BC024094|Adipor2|68465|adiponectin receptor 2	NM_197985|Adipor2|68465|adiponectin receptor 2	AK046591|Adipor2|68465|adiponectin receptor 2	AK134787|Adipor2|68465|adiponectin receptor 2	AK160534|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr2_+_112124767_112124844	2.99701	FOX{I1,J2}.p2	AF211855|Slc12a6|107723|solute carrier family 12, member 6	NM_133648|Slc12a6|107723|solute carrier family 12, member 6
mm9_v1_chr3_-_58934492_58934545	2.98577	FOX{I1,J2}.p2	BC028995|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	AK164982|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	AK140301|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	AF177211|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	BC058558|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	NM_001008497|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	NM_133200|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14
mm9_v1_chr3_-_88259682_88259708	2.97854	FOX{I1,J2}.p2	NM_013658|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr13_-_119175893_119176078	2.97668	FOX{I1,J2}.p2	AK013360|Mrps30|59054|mitochondrial ribosomal protein S30	BC029784|Mrps30|59054|mitochondrial ribosomal protein S30	AK011476|Mrps30|59054|mitochondrial ribosomal protein S30	AK151642|Mrps30|59054|mitochondrial ribosomal protein S30	NM_021556|Mrps30|59054|mitochondrial ribosomal protein S30
mm9_v1_chr11_+_116295406_116295422	2.96781	FOX{I1,J2}.p2	AK144901|Fam100b|319370|family with sequence similarity 100, member B	NM_176902|Fam100b|319370|family with sequence similarity 100, member B
mm9_v1_chr13_+_74777303_74777332	2.96596	FOX{I1,J2}.p2	BC046610|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK159406|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK030329|Erap1|80898|endoplasmic reticulum aminopeptidase 1	NM_030711|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK029841|Erap1|80898|endoplasmic reticulum aminopeptidase 1	AK036559|Erap1|80898|endoplasmic reticulum aminopeptidase 1
mm9_v1_chr11_+_96650437_96650562	2.95842	FOX{I1,J2}.p2	AK157710|Cbx1|12412|chromobox homolog 1 (Drosophila HP1 beta)	NM_007622|Cbx1|12412|chromobox homolog 1 (Drosophila HP1 beta)	AK014215|Cbx1|12412|chromobox homolog 1 (Drosophila HP1 beta)	BC055290|Cbx1|12412|chromobox homolog 1 (Drosophila HP1 beta)	AK017608|Cbx1|12412|chromobox homolog 1 (Drosophila HP1 beta)
mm9_v1_chr4_-_118862555_118862615	2.95226	FOX{I1,J2}.p2	BC063257|Ermap|27028|erythroblast membrane-associated protein	AF153906|Ermap|27028|erythroblast membrane-associated protein	AK036702|Ermap|27028|erythroblast membrane-associated protein	AK158114|Ermap|27028|erythroblast membrane-associated protein	AK137510|Ermap|27028|erythroblast membrane-associated protein	NM_013848|Ermap|27028|erythroblast membrane-associated protein
mm9_v1_chr11_-_100957861_100957957	2.94921	FOX{I1,J2}.p2	
mm9_v1_chr6_-_25759187_25759219	2.94662	FOX{I1,J2}.p2	BC016121|Pot1a|101185|protection of telomeres 1A	AK135346|Pot1a|101185|protection of telomeres 1A	AK137376|Pot1a|101185|protection of telomeres 1A	AK075661|Pot1a|101185|protection of telomeres 1A	AK085041|Pot1a|101185|protection of telomeres 1A	AK040864|Pot1a|101185|protection of telomeres 1A
mm9_v1_chr9_-_105999021_105999113	2.93157	FOX{I1,J2}.p2	AM231151|Col6a4|68553|collagen, type VI, alpha 4	NM_026763|Col6a4|68553|collagen, type VI, alpha 4	AB370265|Col6a4|68553|collagen, type VI, alpha 4
mm9_v1_chr5_-_143987485_143987560	2.92963	FOX{I1,J2}.p2	AY820308|Spdyb|74673|speedy homolog B (Xenopus laevis)	AK015441|Spdyb|74673|speedy homolog B (Xenopus laevis)	NM_029048|Spdyb|74673|speedy homolog B (Xenopus laevis)
mm9_v1_chr10_-_44178372_44178385	2.92876	FOX{I1,J2}.p2	AK149344|Prdm1|12142|PR domain containing 1, with ZNF domain
mm9_v1_chr14_-_118450875_118451546	2.92794	FOX{I1,J2}.p2	EU554632|Dct|13190|dopachrome tautomerase	AK214181|Dct|13190|dopachrome tautomerase	AK214448|Dct|13190|dopachrome tautomerase	AK217087|Dct|13190|dopachrome tautomerase	AK212164|Dct|13190|dopachrome tautomerase	AK219002|Dct|13190|dopachrome tautomerase	BC082330|Dct|13190|dopachrome tautomerase	AK209892|Dct|13190|dopachrome tautomerase	AK191654|Dct|13190|dopachrome tautomerase	BC067064|Dct|13190|dopachrome tautomerase	X63349|Dct|13190|dopachrome tautomerase	AK033040|Dct|13190|dopachrome tautomerase	NM_010024|Dct|13190|dopachrome tautomerase	AK202452|Dct|13190|dopachrome tautomerase
mm9_v1_chr7_-_16870007_16870007	2.92131	FOX{I1,J2}.p2	BC021915|Ccdc9|243846|coiled-coil domain containing 9	NM_172297|Ccdc9|243846|coiled-coil domain containing 9
mm9_v1_chr2_+_156665812_156665874	2.9192	FOX{I1,J2}.p2	AK029490|Tgif2|228839|TGFB-induced factor homeobox 2	NM_173396|Tgif2|228839|TGFB-induced factor homeobox 2	BC138706|Tgif2|228839|TGFB-induced factor homeobox 2	BC138705|Tgif2|228839|TGFB-induced factor homeobox 2	AK157623|Tgif2|228839|TGFB-induced factor homeobox 2	AK017884|Tgif2|228839|TGFB-induced factor homeobox 2
mm9_v1_chr12_-_82480450_82480472	2.91883	FOX{I1,J2}.p2	BC141094|Gm4787|214321|predicted gene 4787	NM_001038995|Gm4787|214321|predicted gene 4787
mm9_v1_chrX_+_34335651_34335798	2.91206	FOX{I1,J2}.p2	BC004570|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	BC086756|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	U10404|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK188826|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK195999|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr9_+_57408729_57408820	2.90952	FOX{I1,J2}.p2	AK003080|Scamp2|24044|secretory carrier membrane protein 2	AK161002|Scamp2|24044|secretory carrier membrane protein 2	NM_022813|Scamp2|24044|secretory carrier membrane protein 2	AF295402|Scamp2|24044|secretory carrier membrane protein 2	AK171766|Scamp2|24044|secretory carrier membrane protein 2	BC003452|Scamp2|24044|secretory carrier membrane protein 2	BC014751|Scamp2|24044|secretory carrier membrane protein 2
mm9_v1_chr11_-_20612281_20612323	2.90413	FOX{I1,J2}.p2	AK150458|Aftph|216549|aftiphilin	AK152308|Aftph|216549|aftiphilin	AK152487|Aftph|216549|aftiphilin	AK161532|Aftph|216549|aftiphilin
mm9_v1_chr15_+_89041957_89042070	2.90375	FOX{I1,J2}.p2	AK084684|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	NM_026813|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	NM_027805|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	AK083335|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	BC024879|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	AK018403|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2
mm9_v1_chr6_+_47827535_47827591	2.89374	FOX{I1,J2}.p2	NM_146175|Zfp282|101095|zinc finger protein 282	AK088531|Zfp282|101095|zinc finger protein 282	AK148038|Zfp282|101095|zinc finger protein 282
mm9_v1_chr18_+_89366818_89366986	2.89069	FOX{I1,J2}.p2	NM_001039149|Cd226|225825|CD226 antigen	NM_178687|Cd226|225825|CD226 antigen	BC132422|Cd226|225825|CD226 antigen	BC138769|Cd226|225825|CD226 antigen	BC145410|Cd226|225825|CD226 antigen	BC145411|Cd226|225825|CD226 antigen	BC051526|Cd226|225825|CD226 antigen	AK140349|Cd226|225825|CD226 antigen	AF416980|Cd226|225825|CD226 antigen	AF421198|Cd226|225825|CD226 antigen	AF421199|Cd226|225825|CD226 antigen	AF421200|Cd226|225825|CD226 antigen
mm9_v1_chr3_-_96729852_96729942	2.88874	FOX{I1,J2}.p2	GU363513|Gja8|14616|gap junction protein, alpha 8	NM_008123|Gja8|14616|gap junction protein, alpha 8	BC120513|Gja8|14616|gap junction protein, alpha 8	BC125569|Gja8|14616|gap junction protein, alpha 8	GU363514|Gja8|14616|gap junction protein, alpha 8
mm9_v1_chr18_+_31948788_31948829	2.88186	FOX{I1,J2}.p2	AK011600|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027002|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	AK009093|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	BC004810|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027101|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D
mm9_v1_chr4_-_140695648_140695720	2.87913	FOX{I1,J2}.p2	BC066992|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK171420|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK027934|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK145912|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	AK171702|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	NM_001025608|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed	NM_174996|D4Ertd22e|213491|DNA segment, Chr 4, ERATO Doi 22, expressed
mm9_v1_chr4_-_115612507_115612530	2.8625	FOX{I1,J2}.p2	BC050912|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AB037698|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AF448118|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AK141654|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	NM_001025567|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	NM_130865|Dmbx1|140477|diencephalon/mesencephalon homeobox 1
mm9_v1_chr9_+_79914685_79914721	2.86144	FOX{I1,J2}.p2	AK053904|Senp6|215351|SUMO/sentrin specific peptidase 6	NM_146003|Senp6|215351|SUMO/sentrin specific peptidase 6
mm9_v1_chr3_+_60432922_60432975	2.8591	FOX{I1,J2}.p2	AK166145|Mbnl1|56758|muscleblind-like 1 (Drosophila)
mm9_v1_chr3_+_116562484_116562495	2.85634	FOX{I1,J2}.p2	NM_001113478|Frrs1|20321|ferric-chelate reductase 1	AK167289|Frrs1|20321|ferric-chelate reductase 1
mm9_v1_chr5_-_123438517_123438541	2.85471	FOX{I1,J2}.p2	NM_001005866|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr10_-_14425271_14425365	2.84384	FOX{I1,J2}.p2	AK009227|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	BC026752|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK002611|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	NM_025418|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK003213|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK004323|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)
mm9_v1_chr11_-_57982024_57982049	2.83823	FOX{I1,J2}.p2	NM_001166669|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166670|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_001166671|Gemin5|216766|gem (nuclear organelle) associated protein 5	NM_172558|Gemin5|216766|gem (nuclear organelle) associated protein 5
mm9_v1_chr8_-_91159932_91160026	2.83285	FOX{I1,J2}.p2	BC039809|Snx20|71607|sorting nexin 20	AK157032|Snx20|71607|sorting nexin 20	AK157884|Snx20|71607|sorting nexin 20	AK170109|Snx20|71607|sorting nexin 20	AK042068|Snx20|71607|sorting nexin 20	AK018632|Snx20|71607|sorting nexin 20	NM_027840|Snx20|71607|sorting nexin 20
mm9_v1_chr4_-_147242501_147242654	2.82905	FOX{I1,J2}.p2	BC017525|Miip|28010|migration and invasion inhibitory protein	AK133976|Miip|28010|migration and invasion inhibitory protein	AK170224|Miip|28010|migration and invasion inhibitory protein	BC024069|Miip|28010|migration and invasion inhibitory protein
mm9_v1_chr3_-_58999025_58999026	2.8264	FOX{I1,J2}.p2	AK080394|Gpr87|84111|G protein-coupled receptor 87
mm9_v1_chr7_-_25022472_25022616	2.8186	FOX{I1,J2}.p2	AF167316|Zfp109|56869|zinc finger protein 109	NM_020262|Zfp109|56869|zinc finger protein 109
mm9_v1_chr2_-_163462584_163462669	2.81429	FOX{I1,J2}.p2	AK128955|Serinc3|26943|serine incorporator 3
mm9_v1_chr4_-_19497166_19497254	2.8065	FOX{I1,J2}.p2	BC036983|Cpne3|70568|copine III	AK220348|Cpne3|70568|copine III	AK146324|Cpne3|70568|copine III	AK017357|Cpne3|70568|copine III	AK036664|Cpne3|70568|copine III	NM_027769|Cpne3|70568|copine III	AK017651|Cpne3|70568|copine III
mm9_v1_chr2_-_155127037_155127091	2.80407	FOX{I1,J2}.p2	BC013076|Pigu|228812|phosphatidylinositol glycan anchor biosynthesis, class U
mm9_v1_chr6_+_140602773_140602776	2.79947	FOX{I1,J2}.p2	AK050137|Aebp2|11569|AE binding protein 2
mm9_v1_chr11_-_69619087_69619125	2.79946	FOX{I1,J2}.p2	BC144871|Tmem102|380705|transmembrane protein 102	AK143262|Tmem102|380705|transmembrane protein 102	NM_001033433|Tmem102|380705|transmembrane protein 102
mm9_v1_chr3_+_89254695_89254739	2.79044	FOX{I1,J2}.p2	AK009590|2310033F14Rik|69555|RIKEN cDNA 2310033F14 gene
mm9_v1_chr9_-_75407338_75407491	2.78352	FOX{I1,J2}.p2	AF237630|Tmod3|50875|tropomodulin 3	AF177172|Tmod3|50875|tropomodulin 3	BC082595|Tmod3|50875|tropomodulin 3	AK167723|Tmod3|50875|tropomodulin 3	AK017725|Tmod3|50875|tropomodulin 3	AK050372|Tmod3|50875|tropomodulin 3	AK082971|Tmod3|50875|tropomodulin 3	AK147017|Tmod3|50875|tropomodulin 3	AK169218|Tmod3|50875|tropomodulin 3	NM_016963|Tmod3|50875|tropomodulin 3
mm9_v1_chr11_-_100683830_100683883	2.78228	FOX{I1,J2}.p2	AY040231|Stat5b|20851|signal transducer and activator of transcription 5B	AY042906|Stat5b|20851|signal transducer and activator of transcription 5B	AY044901|Stat5b|20851|signal transducer and activator of transcription 5B	AY044902|Stat5b|20851|signal transducer and activator of transcription 5B	AY044903|Stat5b|20851|signal transducer and activator of transcription 5B	U21110|Stat5b|20851|signal transducer and activator of transcription 5B	AK088966|Stat5b|20851|signal transducer and activator of transcription 5B	AK154014|Stat5b|20851|signal transducer and activator of transcription 5B	NM_011489|Stat5b|20851|signal transducer and activator of transcription 5B
mm9_v1_chr5_-_123439064_123439107	2.78225	FOX{I1,J2}.p2	BC065090|Kdm2b|30841|lysine (K)-specific demethylase 2B	AK043352|Kdm2b|30841|lysine (K)-specific demethylase 2B	NM_001003953|Kdm2b|30841|lysine (K)-specific demethylase 2B	AK136625|Kdm2b|30841|lysine (K)-specific demethylase 2B
mm9_v1_chr5_+_124933122_124933232	2.7773	FOX{I1,J2}.p2	AK039064|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	BC043031|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	BC058361|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	NM_029532|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)	AK018232|Snrnp35|76167|small nuclear ribonucleoprotein 35 (U11/U12)
mm9_v1_chr14_+_56384798_56384867	2.77483	FOX{I1,J2}.p2	AK155181|Ltb4r1|16995|leukotriene B4 receptor 1	NM_008519|Ltb4r1|16995|leukotriene B4 receptor 1	AF044030|Ltb4r1|16995|leukotriene B4 receptor 1	AK010895|Ltb4r1|16995|leukotriene B4 receptor 1	AF110104|Ltb4r1|16995|leukotriene B4 receptor 1	BC064063|Ltb4r1|16995|leukotriene B4 receptor 1
mm9_v1_chr7_+_129776837_129777102	2.7595	FOX{I1,J2}.p2	BC038148|Prkcb|18751|protein kinase C, beta	BC048553|Prkcb|18751|protein kinase C, beta
mm9_v1_chr11_-_69495203_69495445	2.75714	FOX{I1,J2}.p2	AY008764|Senp3|80886|SUMO/sentrin specific peptidase 3	BC037014|Senp3|80886|SUMO/sentrin specific peptidase 3	AK045071|Senp3|80886|SUMO/sentrin specific peptidase 3
mm9_v1_chr13_-_93258004_93258035	2.75461	FOX{I1,J2}.p2	AK134948|Zfyve16|218441|zinc finger, FYVE domain containing 16
mm9_v1_chr1_+_58852303_58852383	2.75049	FOX{I1,J2}.p2	AF067834|Casp8|12370|caspase 8	BC049955|Casp8|12370|caspase 8
mm9_v1_chr19_+_29218114_29218256	2.74374	FOX{I1,J2}.p2	
mm9_v1_chr6_+_129528268_129528303	2.7414	FOX{I1,J2}.p2	BC145177|Klre1|243655|killer cell lectin-like receptor family E member 1	AF306663|Klre1|243655|killer cell lectin-like receptor family E member 1	NM_153590|Klre1|243655|killer cell lectin-like receptor family E member 1
mm9_v1_chr1_-_39634096_39634285	2.73492	FOX{I1,J2}.p2	BC115968|Rnf149|67702|ring finger protein 149	NM_001033135|Rnf149|67702|ring finger protein 149	AK155360|Rnf149|67702|ring finger protein 149
mm9_v1_chr10_+_111409750_111409849	2.73466	FOX{I1,J2}.p2	NM_178610|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK012108|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK045526|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK036447|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK146926|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC089510|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK011972|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK030560|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK032472|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK041854|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK168675|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC094236|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr6_-_25759225_25759245	2.72815	FOX{I1,J2}.p2	AK036052|Pot1a|101185|protection of telomeres 1A	NM_133931|Pot1a|101185|protection of telomeres 1A	AK005318|Pot1a|101185|protection of telomeres 1A
mm9_v1_chr9_+_62686569_62686663	2.71824	FOX{I1,J2}.p2	AK154414|Cln6|76524|ceroid-lipofuscinosis, neuronal 6	NM_001033175|Cln6|76524|ceroid-lipofuscinosis, neuronal 6	AK154551|Cln6|76524|ceroid-lipofuscinosis, neuronal 6
mm9_v1_chr11_+_43534658_43534687	2.71235	FOX{I1,J2}.p2	AK086604|Pwwp2a|70802|PWWP domain containing 2A	AK039984|Pwwp2a|70802|PWWP domain containing 2A
mm9_v1_chr1_-_196957694_196957780	2.71119	FOX{I1,J2}.p2	AK017702|Cr1l|12946|complement component (3b/4b) receptor 1-like	AK004825|Cr1l|12946|complement component (3b/4b) receptor 1-like	NM_013499|Cr1l|12946|complement component (3b/4b) receptor 1-like
mm9_v1_chr18_+_5046584_5046587	2.71114	FOX{I1,J2}.p2	AF317422|Svil|225115|supervillin	AF317423|Svil|225115|supervillin	NM_153153|Svil|225115|supervillin	HQ259291|Svil|225115|supervillin
mm9_v1_chr5_+_88916999_88917087	2.70797	FOX{I1,J2}.p2	NM_017468|Enam|13801|enamelin	U82698|Enam|13801|enamelin	BC115848|Enam|13801|enamelin
mm9_v1_chr5_+_29972960_29973052	2.70735	FOX{I1,J2}.p2	AK185151|Ube3c|100763|ubiquitin protein ligase E3C	AK203997|Ube3c|100763|ubiquitin protein ligase E3C	AK049125|Ube3c|100763|ubiquitin protein ligase E3C
mm9_v1_chr14_-_56704033_56704109	2.69867	FOX{I1,J2}.p2	NM_008572|Mcpt8|17231|mast cell protease 8	X78545|Mcpt8|17231|mast cell protease 8	AK136485|Mcpt8|17231|mast cell protease 8	BC120607|Mcpt8|17231|mast cell protease 8	BC119342|Mcpt8|17231|mast cell protease 8	BC144934|Mcpt8|17231|mast cell protease 8
mm9_v1_chr12_-_105282485_105282654	2.69856	FOX{I1,J2}.p2	AY326419|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	AK014346|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	BC062143|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	AK014589|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12	NM_026535|Serpina12|68054|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 12
mm9_v1_chrX_+_54465272_54465331	2.69529	FOX{I1,J2}.p2	BC119225|Cd40lg|21947|CD40 ligand	NM_011616|Cd40lg|21947|CD40 ligand	X65453|Cd40lg|21947|CD40 ligand	EU274582|Cd40lg|21947|CD40 ligand
mm9_v1_chr4_+_125701902_125702025	2.69484	FOX{I1,J2}.p2	AK144318|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	NM_007782|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	AK089305|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	M58288|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	BC115865|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	BC116635|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)
mm9_v1_chr12_+_3806955_3807159	2.69424	FOX{I1,J2}.p2	NM_007872|Dnmt3a|13435|DNA methyltransferase 3A	AF503867|Dnmt3a|13435|DNA methyltransferase 3A	AK090132|Dnmt3a|13435|DNA methyltransferase 3A	AK147676|Dnmt3a|13435|DNA methyltransferase 3A	BC007466|Dnmt3a|13435|DNA methyltransferase 3A	AF068625|Dnmt3a|13435|DNA methyltransferase 3A	AK147263|Dnmt3a|13435|DNA methyltransferase 3A	AK147627|Dnmt3a|13435|DNA methyltransferase 3A	AK147642|Dnmt3a|13435|DNA methyltransferase 3A
mm9_v1_chr5_-_3893858_3893932	2.69357	FOX{I1,J2}.p2	AY262005|Mterf|545725|mitochondrial transcription termination factor	AK020320|Gm9897|208595|predicted gene 9897	AK036475|Mterf|545725|mitochondrial transcription termination factor	AK158221|Mterf|545725|mitochondrial transcription termination factor	BC082778|Mterf|545725|mitochondrial transcription termination factor	BC038058|Mterf|545725|mitochondrial transcription termination factor	BC094442|Mterf|545725|mitochondrial transcription termination factor	AY726770|Mterf|545725|mitochondrial transcription termination factor	BC051251|Mterf|545725|mitochondrial transcription termination factor	AK049308|Mterf|545725|mitochondrial transcription termination factor	NM_001013023|Mterf|545725|mitochondrial transcription termination factor	NM_172135|Mterf|545725|mitochondrial transcription termination factor
mm9_v1_chr9_+_63450444_63450525	2.68858	FOX{I1,J2}.p2	AK159897|Aagab|66939|alpha- and gamma-adaptin binding protein	NM_025857|Aagab|66939|alpha- and gamma-adaptin binding protein	BC027311|Aagab|66939|alpha- and gamma-adaptin binding protein	AK017714|Aagab|66939|alpha- and gamma-adaptin binding protein
mm9_v1_chr12_-_52849709_52849723	2.68789	FOX{I1,J2}.p2	AK077185|Hectd1|207304|HECT domain containing 1
mm9_v1_chr8_+_72657386_72657401	2.67966	FOX{I1,J2}.p2	
mm9_v1_chr16_+_56075576_56075640	2.66551	FOX{I1,J2}.p2	AK012740|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK085060|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK013090|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK122542|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK010813|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK164100|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK020068|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK083086|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK164354|Senp7|66315|SUMO1/sentrin specific peptidase 7	BC058593|Senp7|66315|SUMO1/sentrin specific peptidase 7
mm9_v1_chr1_-_175842977_175843178	2.66067	FOX{I1,J2}.p2	BC132314|Mnda|381308|myeloid cell nuclear differentiation antigen	BC132316|Mnda|381308|myeloid cell nuclear differentiation antigen	BC145397|Mnda|381308|myeloid cell nuclear differentiation antigen	BC010546|Ifi204|15951|interferon activated gene 204	M74123|Mnda|381308|myeloid cell nuclear differentiation antigen	S62227|Mnda|381308|myeloid cell nuclear differentiation antigen	AK152683|Mnda|381308|myeloid cell nuclear differentiation antigen	AK152278|Mnda|381308|myeloid cell nuclear differentiation antigen	M31419|Ifi204|15951|interferon activated gene 204	AK152786|Mnda|381308|myeloid cell nuclear differentiation antigen	NM_001033450|Mnda|381308|myeloid cell nuclear differentiation antigen	AK080485|Mnda|381308|myeloid cell nuclear differentiation antigen	AK166217|Mnda|381308|myeloid cell nuclear differentiation antigen
mm9_v1_chr6_+_145756902_145756931	2.65632	FOX{I1,J2}.p2	AF424737|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	NM_027760|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC115779|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC117546|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
mm9_v1_chr1_+_135206360_135206408	2.65304	FOX{I1,J2}.p2	AY707855|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	BC024448|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	AK002581|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	AK141378|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)	NM_026680|Golt1a|68338|golgi transport 1 homolog A (S. cerevisiae)
mm9_v1_chr5_-_138227888_138227970	2.65163	FOX{I1,J2}.p2	AK154415|Mepce|231803|methylphosphate capping enzyme	NM_144913|Mepce|231803|methylphosphate capping enzyme
mm9_v1_chr12_+_112692786_112692860	2.65097	FOX{I1,J2}.p2	
mm9_v1_chr11_+_75195846_75195864	2.64813	FOX{I1,J2}.p2	AK173306|Smyd4|319822|SET and MYND domain containing 4
mm9_v1_chr12_-_109241423_109241623	2.64744	FOX{I1,J2}.p2	BC019503|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AF186019|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AK088219|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043551|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043553|Bcl11b|58208|B-cell leukemia/lymphoma 11B	AB043583|Bcl11b|58208|B-cell leukemia/lymphoma 11B	NM_001079883|Bcl11b|58208|B-cell leukemia/lymphoma 11B	NM_021399|Bcl11b|58208|B-cell leukemia/lymphoma 11B
mm9_v1_chr1_-_64167574_64167617	2.64266	FOX{I1,J2}.p2	AB221646|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr2_+_132512617_132512719	2.63983	FOX{I1,J2}.p2	BC138171|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene	AK004090|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene
mm9_v1_chr10_-_58904445_58904526	2.63353	FOX{I1,J2}.p2	AY180915|Oit3|18302|oncoprotein induced transcript 3	AF356506|Oit3|18302|oncoprotein induced transcript 3	AK050081|Oit3|18302|oncoprotein induced transcript 3	AK040570|Oit3|18302|oncoprotein induced transcript 3	NM_010959|Oit3|18302|oncoprotein induced transcript 3
mm9_v1_chr4_-_117564594_117564651	2.63305	FOX{I1,J2}.p2	BC031124|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK018638|Dph2|67728|DPH2 homolog (S. cerevisiae)	NM_026344|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK011199|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK051026|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK080747|Dph2|67728|DPH2 homolog (S. cerevisiae)	BC014746|Dph2|67728|DPH2 homolog (S. cerevisiae)
mm9_v1_chr11_+_96143218_96143218	2.62698	FOX{I1,J2}.p2	NM_010461|Hoxb8|15416|homeobox B8	X13721|Hoxb8|15416|homeobox B8
mm9_v1_chrX_-_70510714_70510728	2.62624	FOX{I1,J2}.p2	L22977|Xlr3c|22446|X-linked lymphocyte-regulated 3C	NM_011727|Xlr3c|22446|X-linked lymphocyte-regulated 3C	U02600|Xlr3c|22446|X-linked lymphocyte-regulated 3C
mm9_v1_chr9_-_109987245_109987321	2.60922	FOX{I1,J2}.p2	AK202261|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr5_+_11918042_11918042	2.6044	FOX{I1,J2}.p2	BC133658|4933402N22Rik|545732|RIKEN cDNA 4933402N22 gene	NM_001177510|4933402N22Rik|545732|RIKEN cDNA 4933402N22 gene
mm9_v1_chr13_-_13097649_13097665	2.60312	FOX{I1,J2}.p2	BC064771|Prl2c2|18811|prolactin family 2, subfamily c, member 2	BC080826|Prl2c2|18811|prolactin family 2, subfamily c, member 2
mm9_v1_chr2_-_72931338_72931457	2.59444	FOX{I1,J2}.p2	
mm9_v1_chr19_+_41557475_41557518	2.58775	FOX{I1,J2}.p2	AK041621|Lcor|212391|ligand dependent nuclear receptor corepressor
mm9_v1_chr11_-_43239482_43239482	2.58736	FOX{I1,J2}.p2	AF069051|Pttg1|30939|pituitary tumor-transforming gene 1	AF071209|Pttg1|30939|pituitary tumor-transforming gene 1	NM_013917|Pttg1|30939|pituitary tumor-transforming gene 1
mm9_v1_chr4_-_151665770_151665770	2.58395	FOX{I1,J2}.p2	AK090218|Hes3|15207|hairy and enhancer of split 3 (Drosophila)	NM_008237|Hes3|15207|hairy and enhancer of split 3 (Drosophila)
mm9_v1_chr9_+_109778461_109778493	2.58356	FOX{I1,J2}.p2	BC046296|Cdc25a|12530|cell division cycle 25 homolog A (S. pombe)	AK077609|Cdc25a|12530|cell division cycle 25 homolog A (S. pombe)	U27323|Cdc25a|12530|cell division cycle 25 homolog A (S. pombe)
mm9_v1_chr11_-_34647110_34647142	2.58238	FOX{I1,J2}.p2	AK011138|Ccdc99|70385|coiled-coil domain containing 99	BC006674|Ccdc99|70385|coiled-coil domain containing 99	AK012927|Ccdc99|70385|coiled-coil domain containing 99	NM_027411|Ccdc99|70385|coiled-coil domain containing 99
mm9_v1_chr1_+_9788206_9788302	2.58089	FOX{I1,J2}.p2	NM_133220|Sgk3|170755|serum/glucocorticoid regulated kinase 3	NM_177547|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK143836|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK031133|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151793|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171120|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171186|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151867|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK171678|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK172323|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK028722|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK039247|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK039427|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151181|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK166414|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AK151996|Sgk3|170755|serum/glucocorticoid regulated kinase 3	AF312007|Sgk3|170755|serum/glucocorticoid regulated kinase 3
mm9_v1_chr2_-_126719808_126719853	2.57757	FOX{I1,J2}.p2	AK080421|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene	AK081953|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene
mm9_v1_chr6_+_139789965_139790178	2.5738	FOX{I1,J2}.p2	AB008792|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	NM_011084|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AK054415|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AK054271|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	AK054266|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide	BC061142|Pik3c2g|18705|phosphatidylinositol 3-kinase, C2 domain containing, gamma polypeptide
mm9_v1_chr6_+_15750966_15750972	2.56965	FOX{I1,J2}.p2	AK087298|Mdfic|16543|MyoD family inhibitor domain containing	U13371|Mdfic|16543|MyoD family inhibitor domain containing
mm9_v1_chr8_+_26918945_26918985	2.56872	FOX{I1,J2}.p2	AK019725|Star|20845|steroidogenic acute regulatory protein	BC060970|Star|20845|steroidogenic acute regulatory protein	AK136327|Star|20845|steroidogenic acute regulatory protein	AK014431|Star|20845|steroidogenic acute regulatory protein	AK054470|Star|20845|steroidogenic acute regulatory protein	NM_011485|Star|20845|steroidogenic acute regulatory protein	BC082283|Star|20845|steroidogenic acute regulatory protein	L36062|Star|20845|steroidogenic acute regulatory protein
mm9_v1_chr18_-_39572137_39572180	2.56711	FOX{I1,J2}.p2	AK171439|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	AK163857|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr6_+_21899614_21899692	2.56679	FOX{I1,J2}.p2	NM_023626|Ing3|71777|inhibitor of growth family, member 3	AY007791|Ing3|71777|inhibitor of growth family, member 3	AK080787|Ing3|71777|inhibitor of growth family, member 3	AK131993|Ing3|71777|inhibitor of growth family, member 3	BC018342|Ing3|71777|inhibitor of growth family, member 3
mm9_v1_chr14_+_52730577_52730615	2.56314	FOX{I1,J2}.p2	BC081545|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	NM_001168515|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	NM_023879|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AK020800|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AK044753|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AY008297|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	AY914560|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	BC086692|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1	BC016092|Rpgrip1|77945|retinitis pigmentosa GTPase regulator interacting protein 1
mm9_v1_chr1_+_136007818_136007852	2.56102	FOX{I1,J2}.p2	AK009012|Chit1|71884|chitinase 1 (chitotriosidase)	AY458654|Chit1|71884|chitinase 1 (chitotriosidase)	NM_027979|Chit1|71884|chitinase 1 (chitotriosidase)	BC138765|Chit1|71884|chitinase 1 (chitotriosidase)
mm9_v1_chr7_+_97535490_97535508	2.5555	FOX{I1,J2}.p2	AK051653|Sytl2|83671|synaptotagmin-like 2	NM_001040087|Sytl2|83671|synaptotagmin-like 2	NM_001040088|Sytl2|83671|synaptotagmin-like 2	AK162921|Sytl2|83671|synaptotagmin-like 2	AK027924|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr13_+_13274982_13275048	2.55478	FOX{I1,J2}.p2	AK145824|Prl2c5|107849|prolactin family 2, subfamily c, member 5	BC132514|Prl2c5|107849|prolactin family 2, subfamily c, member 5	BC132516|Prl2c5|107849|prolactin family 2, subfamily c, member 5	AF128884|Prl2c5|107849|prolactin family 2, subfamily c, member 5	NM_181852|Prl2c5|107849|prolactin family 2, subfamily c, member 5
mm9_v1_chr11_-_72609306_72609347	2.55193	FOX{I1,J2}.p2	BC086682|Cyb5d2|192986|cytochrome b5 domain containing 2	NM_001024926|Cyb5d2|192986|cytochrome b5 domain containing 2	AK142515|Cyb5d2|192986|cytochrome b5 domain containing 2
mm9_v1_chr1_-_140739020_140739033	2.54902	FOX{I1,J2}.p2	AK031478|Lhx9|16876|LIM homeobox protein 9	NM_001025565|Lhx9|16876|LIM homeobox protein 9	NM_001042577|Lhx9|16876|LIM homeobox protein 9	BC072623|Lhx9|16876|LIM homeobox protein 9
mm9_v1_chr5_-_124170947_124171001	2.5485	FOX{I1,J2}.p2	AK017857|Zcchc8|70650|zinc finger, CCHC domain containing 8	AK167126|Zcchc8|70650|zinc finger, CCHC domain containing 8	AK166990|Zcchc8|70650|zinc finger, CCHC domain containing 8	AK167736|Zcchc8|70650|zinc finger, CCHC domain containing 8	AK033469|Zcchc8|70650|zinc finger, CCHC domain containing 8
mm9_v1_chr16_+_17331463_17331501	2.54476	FOX{I1,J2}.p2	NM_008223|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr2_-_84567424_84567451	2.5419	FOX{I1,J2}.p2	BC003237|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	NM_133840|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	AK053169|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	AK169709|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)
mm9_v1_chr3_-_144595486_144595494	2.53788	FOX{I1,J2}.p2	BC139088|AI747448|99709|expressed sequence AI747448	BC139089|AI747448|99709|expressed sequence AI747448	AK136515|AI747448|99709|expressed sequence AI747448	NM_001033199|AI747448|99709|expressed sequence AI747448
mm9_v1_chr16_-_98169926_98169967	2.52911	FOX{I1,J2}.p2	AK017406|Zfp295|114565|zinc finger protein 295	AK084920|Zfp295|114565|zinc finger protein 295
mm9_v1_chr8_+_119983566_119983649	2.51677	FOX{I1,J2}.p2	AK049761|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr19_+_29485408_29485503	2.51649	FOX{I1,J2}.p2	AK089369|Pdcd1lg2|58205|programmed cell death 1 ligand 2	NM_021396|Pdcd1lg2|58205|programmed cell death 1 ligand 2	AF142780|Pdcd1lg2|58205|programmed cell death 1 ligand 2	AK155002|Pdcd1lg2|58205|programmed cell death 1 ligand 2	BC104138|Pdcd1lg2|58205|programmed cell death 1 ligand 2	BC104139|Pdcd1lg2|58205|programmed cell death 1 ligand 2
mm9_v1_chr3_+_52153283_52153283	2.50882	FOX{I1,J2}.p2	AK054289|Foxo1|56458|forkhead box O1
mm9_v1_chr7_-_108729674_108729685	2.50675	FOX{I1,J2}.p2	AF016463|Art2b|11872|ADP-ribosyltransferase 2b	AF016465|Art2b|11872|ADP-ribosyltransferase 2b	NM_019915|Art2b|11872|ADP-ribosyltransferase 2b	X87612|Art2b|11872|ADP-ribosyltransferase 2b	S79913|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene
mm9_v1_chrX_+_35474016_35474016	2.49763	FOX{I1,J2}.p2	NM_001185002|Rhox13|73614|reproductive homeobox 13
mm9_v1_chr15_+_80541675_80541764	2.4971	FOX{I1,J2}.p2	AK048628|Tnrc6b|213988|trinucleotide repeat containing 6b	NM_144812|Tnrc6b|213988|trinucleotide repeat containing 6b
mm9_v1_chr11_-_118263125_118263276	2.49312	FOX{I1,J2}.p2	AK152182|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK155031|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK137836|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	L16894|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	BC090658|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	NM_011150|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	X67809|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK153313|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK153396|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK079915|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein	AK150021|Lgals3bp|19039|lectin, galactoside-binding, soluble, 3 binding protein
mm9_v1_chr2_+_10294062_10294208	2.49268	FOX{I1,J2}.p2	AK040600|Sfmbt2|353282|Scm-like with four mbt domains 2	NM_001198809|Sfmbt2|353282|Scm-like with four mbt domains 2	NM_177386|Sfmbt2|353282|Scm-like with four mbt domains 2	AK052339|Sfmbt2|353282|Scm-like with four mbt domains 2	BC115510|Sfmbt2|353282|Scm-like with four mbt domains 2	BC115511|Sfmbt2|353282|Scm-like with four mbt domains 2	AK147651|Sfmbt2|353282|Scm-like with four mbt domains 2
mm9_v1_chr13_-_93962125_93962314	2.49066	FOX{I1,J2}.p2	AK146086|Papd4|100715|PAP associated domain containing 4	BC016629|Papd4|100715|PAP associated domain containing 4	NM_133905|Papd4|100715|PAP associated domain containing 4
mm9_v1_chr11_-_106646226_106646242	2.48641	FOX{I1,J2}.p2	AK013106|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr13_+_36209724_36209798	2.48567	FOX{I1,J2}.p2	AK020164|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK170986|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK076259|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK054370|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	BC002147|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)	AK013211|Fars2|69955|phenylalanine-tRNA synthetase 2 (mitochondrial)
mm9_v1_chr5_-_66542161_66542216	2.48149	FOX{I1,J2}.p2	AK035620|Rbm47|245945|RNA binding motif protein 47	AK142584|Rbm47|245945|RNA binding motif protein 47	AK085733|Rbm47|245945|RNA binding motif protein 47	NM_178446|Rbm47|245945|RNA binding motif protein 47	BC112902|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr11_+_115794942_115794982	2.47104	FOX{I1,J2}.p2	AK147869|Sap30bp|57230|SAP30 binding protein	AK012245|Sap30bp|57230|SAP30 binding protein	BC021757|Sap30bp|57230|SAP30 binding protein	NM_020483|Sap30bp|57230|SAP30 binding protein	X68061|Sap30bp|57230|SAP30 binding protein
mm9_v1_chr10_-_44178474_44178587	2.46764	FOX{I1,J2}.p2	AK133503|Prdm1|12142|PR domain containing 1, with ZNF domain	BC129801|Prdm1|12142|PR domain containing 1, with ZNF domain	NM_007548|Prdm1|12142|PR domain containing 1, with ZNF domain	U08185|Prdm1|12142|PR domain containing 1, with ZNF domain
mm9_v1_chr15_-_42508294_42508522	2.45559	FOX{I1,J2}.p2	U83509|Angpt1|11600|angiopoietin 1	BC067410|Angpt1|11600|angiopoietin 1	NM_009640|Angpt1|11600|angiopoietin 1	AK172868|Angpt1|11600|angiopoietin 1	AK012027|Angpt1|11600|angiopoietin 1	AK088439|Angpt1|11600|angiopoietin 1
mm9_v1_chr13_-_65307023_65307023	2.45547	FOX{I1,J2}.p2	NM_175290|Nlrp4f|97895|NLR family, pyrin domain containing 4F
mm9_v1_chr5_-_92738981_92739016	2.4523	FOX{I1,J2}.p2	BC042708|Sdad1|231452|SDA1 domain containing 1	AK164608|Sdad1|231452|SDA1 domain containing 1
mm9_v1_chr3_+_159158396_159158460	2.44662	FOX{I1,J2}.p2	NM_001172092|Depdc1a|76131|DEP domain containing 1a	NM_001172093|Depdc1a|76131|DEP domain containing 1a	NM_029523|Depdc1a|76131|DEP domain containing 1a	BC023934|Depdc1a|76131|DEP domain containing 1a	AK088719|Depdc1a|76131|DEP domain containing 1a	AK146458|Depdc1a|76131|DEP domain containing 1a	AK050456|Depdc1a|76131|DEP domain containing 1a
mm9_v1_chr18_-_84837108_84837240	2.44441	FOX{I1,J2}.p2	AK194231|Cndp2|66054|CNDP dipeptidase 2 (metallopeptidase M20 family)
mm9_v1_chr3_-_106022381_106022396	2.4418	FOX{I1,J2}.p2	AY049765|Chi3l4|104183|chitinase 3-like 4	AY065557|Chi3l4|104183|chitinase 3-like 4	BC130015|Chi3l4|104183|chitinase 3-like 4	AK131914|Chi3l4|104183|chitinase 3-like 4	NM_145126|Chi3l4|104183|chitinase 3-like 4
mm9_v1_chr11_+_87607531_87607556	2.44062	FOX{I1,J2}.p2	AY500847|Mpo|17523|myeloperoxidase
mm9_v1_chr4_+_136166351_136166390	2.42793	FOX{I1,J2}.p2	AK016074|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	NM_026300|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	BC048442|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene	AK015053|4930549C01Rik|67663|RIKEN cDNA 4930549C01 gene
mm9_v1_chr18_-_62915799_62916000	2.42486	FOX{I1,J2}.p2	BC072581|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK012381|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene	AK020725|2700046A07Rik|78449|RIKEN cDNA 2700046A07 gene
mm9_v1_chr2_+_84820615_84820637	2.42013	FOX{I1,J2}.p2	AK156715|Prg2|19074|proteoglycan 2, bone marrow	AK010901|Prg2|19074|proteoglycan 2, bone marrow	NM_008920|Prg2|19074|proteoglycan 2, bone marrow	BC109348|Prg2|19074|proteoglycan 2, bone marrow
mm9_v1_chr11_-_99957489_99957554	2.41437	FOX{I1,J2}.p2	BC140965|Krt35|53617|keratin 35	BC100542|Krt35|53617|keratin 35	NM_016880|Krt35|53617|keratin 35	AF020790|Krt35|53617|keratin 35	AK132593|Krt35|53617|keratin 35
mm9_v1_chr8_+_81033220_81033473	2.41291	FOX{I1,J2}.p2	NM_029736|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK160402|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK079901|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK152752|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK152849|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK010834|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK165983|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AK040517|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC116666|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	BC116717|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825926|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825927|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7	AY825928|Slc10a7|76775|solute carrier family 10 (sodium/bile acid cotransporter family), member 7
mm9_v1_chr6_+_124654080_124654110	2.41233	FOX{I1,J2}.p2	AK194975|Lpcat3|14792|lysophosphatidylcholine acyltransferase 3
mm9_v1_chr4_+_102243272_102243317	2.40905	FOX{I1,J2}.p2	AK011999|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC007155|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr2_+_180447250_180447250	2.40545	FOX{I1,J2}.p2	BC059022|2310003C23Rik|76425|RIKEN cDNA 2310003C23 gene	NM_029607|2310003C23Rik|76425|RIKEN cDNA 2310003C23 gene
mm9_v1_chr9_-_14587400_14587407	2.40405	FOX{I1,J2}.p2	BC020398|Ankrd49|56503|ankyrin repeat domain 49	BC019777|Ankrd49|56503|ankyrin repeat domain 49	NM_019683|Ankrd49|56503|ankyrin repeat domain 49
mm9_v1_chr15_+_66409094_66409201	2.40265	FOX{I1,J2}.p2	AK047044|Phf20l1|239510|PHD finger protein 20-like 1	AK032638|Phf20l1|239510|PHD finger protein 20-like 1	NM_001081409|Phf20l1|239510|PHD finger protein 20-like 1	BC082777|Phf20l1|239510|PHD finger protein 20-like 1	BC052212|Phf20l1|239510|PHD finger protein 20-like 1	BC061492|Phf20l1|239510|PHD finger protein 20-like 1
mm9_v1_chr13_-_74832039_74832154	2.40095	FOX{I1,J2}.p2	AK037098|Cast|12380|calpastatin
mm9_v1_chr1_-_13364092_13364163	2.39818	FOX{I1,J2}.p2	AF000582|Ncoa2|17978|nuclear receptor coactivator 2	AK048972|Ncoa2|17978|nuclear receptor coactivator 2	AK087443|Ncoa2|17978|nuclear receptor coactivator 2	U39060|Ncoa2|17978|nuclear receptor coactivator 2	AK052117|Ncoa2|17978|nuclear receptor coactivator 2	NM_001077695|Ncoa2|17978|nuclear receptor coactivator 2	NM_008678|Ncoa2|17978|nuclear receptor coactivator 2
mm9_v1_chr14_-_103379725_103379759	2.3972	FOX{I1,J2}.p2	AK086988|Kctd12|239217|potassium channel tetramerisation domain containing 12	AK032276|Kctd12|239217|potassium channel tetramerisation domain containing 12
mm9_v1_chr5_-_128097687_128097794	2.3929	FOX{I1,J2}.p2	BC016233|Slc15a4|100561|solute carrier family 15, member 4	NM_133895|Slc15a4|100561|solute carrier family 15, member 4	AY050630|Slc15a4|100561|solute carrier family 15, member 4	AK048529|Slc15a4|100561|solute carrier family 15, member 4	AK154238|Slc15a4|100561|solute carrier family 15, member 4
mm9_v1_chr2_-_126444378_126444429	2.39286	FOX{I1,J2}.p2	X57437|Hdc|15186|histidine decarboxylase	BC052833|Hdc|15186|histidine decarboxylase	AK076384|Hdc|15186|histidine decarboxylase	AK150168|Hdc|15186|histidine decarboxylase	AK088545|Hdc|15186|histidine decarboxylase	AK153104|Hdc|15186|histidine decarboxylase	NM_008230|Hdc|15186|histidine decarboxylase	AK133455|Hdc|15186|histidine decarboxylase
mm9_v1_chr11_-_120092784_120092898	2.3911	FOX{I1,J2}.p2	AK034741|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene	AK162948|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene	AK013668|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene
mm9_v1_chr17_+_47641999_47642189	2.39043	FOX{I1,J2}.p2	NM_001081635|Ccnd3|12445|cyclin D3	NM_001081636|Ccnd3|12445|cyclin D3	AK161758|Ccnd3|12445|cyclin D3	AK083384|Ccnd3|12445|cyclin D3	AK020317|Ccnd3|12445|cyclin D3
mm9_v1_chr2_-_42509117_42509117	2.38885	FOX{I1,J2}.p2	AF270884|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)	NM_053011|Lrp1b|94217|low density lipoprotein-related protein 1B (deleted in tumors)
mm9_v1_chr16_+_32496350_32496366	2.38588	FOX{I1,J2}.p2	AK132780|Zdhhc19|245308|zinc finger, DHHC domain containing 19	AK133398|Zdhhc19|245308|zinc finger, DHHC domain containing 19	BC049761|Zdhhc19|245308|zinc finger, DHHC domain containing 19	NM_199309|Zdhhc19|245308|zinc finger, DHHC domain containing 19
mm9_v1_chr10_-_41905549_41905563	2.37981	FOX{I1,J2}.p2	AK041595|Foxo3|56484|forkhead box O3	AK159465|Foxo3|56484|forkhead box O3
mm9_v1_chr5_-_105411580_105411736	2.37073	FOX{I1,J2}.p2	BC029095|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK037614|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AF324242|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK051880|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK156626|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	BC138773|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	BC138772|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	NM_030239|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK030831|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3
mm9_v1_chr16_-_96413824_96413863	2.36848	FOX{I1,J2}.p2	AK031481|Lca5l|385668|Leber congenital amaurosis 5-like	AK029554|Lca5l|385668|Leber congenital amaurosis 5-like	AK133316|Lca5l|385668|Leber congenital amaurosis 5-like	NM_001001492|Lca5l|385668|Leber congenital amaurosis 5-like
mm9_v1_chr5_-_66542128_66542136	2.36703	FOX{I1,J2}.p2	AK089362|Rbm47|245945|RNA binding motif protein 47
mm9_v1_chr12_+_87027595_87027673	2.36601	FOX{I1,J2}.p2	AK018587|Batf|53314|basic leucine zipper transcription factor, ATF-like	AF017021|Batf|53314|basic leucine zipper transcription factor, ATF-like	NM_016767|Batf|53314|basic leucine zipper transcription factor, ATF-like
mm9_v1_chr1_+_21339757_21339831	2.36471	FOX{I1,J2}.p2	NM_183322|Khdc1a|368204|KH domain containing 1A	AK136166|Khdc1a|368204|KH domain containing 1A
mm9_v1_chr7_+_11591093_11591093	2.36346	FOX{I1,J2}.p2	BC050218|Zscan4c|245109|zinc finger and SCAN domain containing 4C	NM_001013765|Zscan4c|245109|zinc finger and SCAN domain containing 4C
mm9_v1_chr5_-_76760118_76760180	2.36259	FOX{I1,J2}.p2	AK133140|Pdcl2|79455|phosducin-like 2	AK005814|Pdcl2|79455|phosducin-like 2	NM_023508|Pdcl2|79455|phosducin-like 2	BC048432|Pdcl2|79455|phosducin-like 2	AK006773|Pdcl2|79455|phosducin-like 2	AK005602|Pdcl2|79455|phosducin-like 2	AK006040|Pdcl2|79455|phosducin-like 2	AK132738|Pdcl2|79455|phosducin-like 2
mm9_v1_chr14_-_62250728_62250729	2.36157	FOX{I1,J2}.p2	AK143097|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK162803|Dleu2|668253|deleted in lymphocytic leukemia, 2	AK164623|Dleu2|668253|deleted in lymphocytic leukemia, 2
mm9_v1_chr17_-_8340473_8340696	2.36041	FOX{I1,J2}.p2	BC100330|Rnaset2b|68195|ribonuclease T2B	BC031496|Rnaset2a|100037283|ribonuclease T2A	AK019234|Rnaset2a|100037283|ribonuclease T2A	AK018722|Rnaset2a|100037283|ribonuclease T2A	NM_001083938|Rnaset2a|100037283|ribonuclease T2A	AK015947|Rnaset2a|100037283|ribonuclease T2A	NM_026611|Rnaset2b|68195|ribonuclease T2B
mm9_v1_chr18_-_85120825_85120843	2.35913	FOX{I1,J2}.p2	AK168105|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK013281|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene
mm9_v1_chr12_-_102267159_102267268	2.35864	FOX{I1,J2}.p2	AY339881|Ccdc88c|68339|coiled-coil domain containing 88C	NM_026681|Ccdc88c|68339|coiled-coil domain containing 88C	BC043115|Ccdc88c|68339|coiled-coil domain containing 88C	BC063255|Ccdc88c|68339|coiled-coil domain containing 88C
mm9_v1_chr11_+_77796383_77796501	2.35857	FOX{I1,J2}.p2	AK141796|Phf12|268448|PHD finger protein 12
mm9_v1_chr17_-_44873596_44873596	2.35605	FOX{I1,J2}.p2	D14636|Runx2|12393|runt related transcription factor 2	D14637|Runx2|12393|runt related transcription factor 2	NM_001145920|Runx2|12393|runt related transcription factor 2
mm9_v1_chr8_+_47254909_47254909	2.35483	FOX{I1,J2}.p2	BC058092|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene	NM_025747|4933411K20Rik|66756|RIKEN cDNA 4933411K20 gene
mm9_v1_chr12_-_103196366_103196464	2.34808	FOX{I1,J2}.p2	AF537188|Atxn3|110616|ataxin 3	AK030842|Atxn3|110616|ataxin 3	AK008675|Atxn3|110616|ataxin 3	BC087880|Atxn3|110616|ataxin 3	BC049743|Atxn3|110616|ataxin 3	NM_001167914|Atxn3|110616|ataxin 3	NM_029705|Atxn3|110616|ataxin 3
mm9_v1_chr18_+_44540137_44540241	2.3471	FOX{I1,J2}.p2	AK153105|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	NM_027490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK008609|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK017809|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK166560|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK010490|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK152160|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153264|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)	AK153310|Dcp2|70640|DCP2 decapping enzyme homolog (S. cerevisiae)
mm9_v1_chr2_+_24200925_24200957	2.34616	FOX{I1,J2}.p2	M74294|Il1rn|16181|interleukin 1 receptor antagonist	AK089222|Il1rn|16181|interleukin 1 receptor antagonist	AK154601|Il1rn|16181|interleukin 1 receptor antagonist	AK155263|Il1rn|16181|interleukin 1 receptor antagonist	AK155756|Il1rn|16181|interleukin 1 receptor antagonist	AK155846|Il1rn|16181|interleukin 1 receptor antagonist	AK155908|Il1rn|16181|interleukin 1 receptor antagonist	AK155798|Il1rn|16181|interleukin 1 receptor antagonist	AK156034|Il1rn|16181|interleukin 1 receptor antagonist	M57525|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chr17_+_18561067_18561067	2.33495	FOX{I1,J2}.p2	NM_001102581|Vmn2r95|328759|vomeronasal 2, receptor 95
mm9_v1_chr9_+_57385317_57385465	2.33112	FOX{I1,J2}.p2	AK028365|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	NM_001166364|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	NM_175273|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	BC111883|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	BC112403|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene
mm9_v1_chr17_-_26017802_26017802	2.3307	FOX{I1,J2}.p2	NM_001100454|Wfikkn1|215001|WAP, FS, Ig, KU, and NTR-containing protein 1
mm9_v1_chr10_-_127806232_127806252	2.33008	FOX{I1,J2}.p2	AK080862|Coq10a|210582|coenzyme Q10 homolog A (yeast)	BC147716|Coq10a|210582|coenzyme Q10 homolog A (yeast)	BC147722|Coq10a|210582|coenzyme Q10 homolog A (yeast)
mm9_v1_chr19_-_46747463_46747489	2.32885	FOX{I1,J2}.p2	BC064793|Cyp17a1|13074|cytochrome P450, family 17, subfamily a, polypeptide 1	NM_007809|Cyp17a1|13074|cytochrome P450, family 17, subfamily a, polypeptide 1
mm9_v1_chr7_-_35841565_35841620	2.32873	FOX{I1,J2}.p2	NM_009884|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	S80556|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma
mm9_v1_chr11_+_20991293_20991320	2.32665	FOX{I1,J2}.p2	AK020915|Peli1|67245|pellino 1
mm9_v1_chr9_+_98390955_98390986	2.31998	FOX{I1,J2}.p2	NM_009034|Rbp2|19660|retinol binding protein 2, cellular	AK003312|Rbp2|19660|retinol binding protein 2, cellular	X74154|Rbp2|19660|retinol binding protein 2, cellular	BC125551|Rbp2|19660|retinol binding protein 2, cellular	BC125553|Rbp2|19660|retinol binding protein 2, cellular
mm9_v1_chr9_+_123428782_123429096	2.31906	FOX{I1,J2}.p2	AK212865|Limd1|29806|LIM domains containing 1	AK218834|Limd1|29806|LIM domains containing 1	AK213065|Limd1|29806|LIM domains containing 1	AK214169|Limd1|29806|LIM domains containing 1	AK211030|Limd1|29806|LIM domains containing 1
mm9_v1_chr12_+_11272691_11272706	2.31749	FOX{I1,J2}.p2	BC090630|Smc6|67241|structural maintenance of chromosomes 6	NM_025695|Smc6|67241|structural maintenance of chromosomes 6
mm9_v1_chr12_-_105392063_105392090	2.31625	FOX{I1,J2}.p2	BC116724|Serpina3c|16625|serine (or cysteine) peptidase inhibitor, clade A, member 3C	NM_008458|Serpina3c|16625|serine (or cysteine) peptidase inhibitor, clade A, member 3C
mm9_v1_chr15_+_76730338_76730405	2.31489	FOX{I1,J2}.p2	AK013148|Commd5|66398|COMM domain containing 5	AK010045|Commd5|66398|COMM domain containing 5	NM_025536|Commd5|66398|COMM domain containing 5	BC025891|Commd5|66398|COMM domain containing 5
mm9_v1_chr10_+_111520409_111520427	2.31217	FOX{I1,J2}.p2	AK014846|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	AK161292|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	BC118017|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	NM_026223|Glipr1l2|67537|GLI pathogenesis-related 1 like 2	AK015834|Glipr1l2|67537|GLI pathogenesis-related 1 like 2
mm9_v1_chr7_+_97535516_97535523	2.31113	FOX{I1,J2}.p2	AB057756|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr13_+_97158248_97158334	2.30829	FOX{I1,J2}.p2	AK150656|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	NM_026173|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK012926|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC037631|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC027118|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK089013|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK004769|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC016527|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)
mm9_v1_chr10_-_43621518_43621567	2.30679	FOX{I1,J2}.p2	BC070459|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	AK012351|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	NM_001081054|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	AK041347|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	AK038801|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
mm9_v1_chr7_+_20094042_20094114	2.30616	FOX{I1,J2}.p2	BC106114|Trappc6a|67091|trafficking protein particle complex 6A	NM_025960|Trappc6a|67091|trafficking protein particle complex 6A	AK007965|Trappc6a|67091|trafficking protein particle complex 6A	AK008022|Trappc6a|67091|trafficking protein particle complex 6A	AK008462|Trappc6a|67091|trafficking protein particle complex 6A	AK088832|Trappc6a|67091|trafficking protein particle complex 6A	BC020128|Trappc6a|67091|trafficking protein particle complex 6A	AK015839|Trappc6a|67091|trafficking protein particle complex 6A
mm9_v1_chr6_+_134961629_134961652	2.30131	FOX{I1,J2}.p2	NM_026360|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK010310|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132242|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132244|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK076982|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC060168|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC095944|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm9_v1_chr19_+_3323339_3323356	2.30003	FOX{I1,J2}.p2	AK133472|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver	AK147770|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver	AK077454|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver	AK136487|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver	AK128925|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver	AK149688|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver
mm9_v1_chr2_-_7317513_7317626	2.29986	FOX{I1,J2}.p2	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr6_+_83276009_83276097	2.29861	FOX{I1,J2}.p2	AK028416|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	AK163300|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	AK172205|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	NM_145571|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	AK167515|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	AK170691|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	BC009149|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	AK158228|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	AK028695|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)	BC033463|Mobkl1b|232157|MOB1, Mps One Binder kinase activator-like 1B (yeast)
mm9_v1_chr2_-_126444323_126444348	2.29564	FOX{I1,J2}.p2	AF109137|Hdc|15186|histidine decarboxylase
mm9_v1_chr15_-_98701613_98701613	2.29548	FOX{I1,J2}.p2	NM_001033276|Mll2|381022|myeloid/lymphoid or mixed-lineage leukemia 2
mm9_v1_chr6_-_130143018_130143129	2.29372	FOX{I1,J2}.p2	BC116376|Klra6|16637|killer cell lectin-like receptor, subfamily A, member 6	BC131790|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	AF237686|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	NM_010651|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	U49865|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	U49866|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9	U49867|Klra9|16640|killer cell lectin-like receptor subfamily A, member 9
mm9_v1_chr2_+_172805342_172805379	2.29048	FOX{I1,J2}.p2	AF126400|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF163053|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF163054|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	NM_001083959|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	NM_001083960|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	NM_012046|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF169386|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF165313|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF167439|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF173848|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)	AF149309|Spo11|26972|sporulation protein, meiosis-specific, SPO11 homolog (S. cerevisiae)
mm9_v1_chr5_+_88983413_88983556	2.29008	FOX{I1,J2}.p2	BC003213|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	AK010316|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	AK145637|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	BC016581|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	BC022994|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	AF155362|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	AF271213|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)	NM_023054|Utp3|65961|UTP3, small subunit (SSU) processome component, homolog (S. cerevisiae)
mm9_v1_chr9_+_55174719_55174759	2.28176	FOX{I1,J2}.p2	BC068128|AI118078|244886|expressed sequence AI118078	AK036040|AI118078|244886|expressed sequence AI118078	NM_172923|AI118078|244886|expressed sequence AI118078
mm9_v1_chr3_+_5090275_5090294	2.28168	FOX{I1,J2}.p2	
mm9_v1_chr6_-_115708978_115708979	2.28125	FOX{I1,J2}.p2	BC019416|Tmem40|94346|transmembrane protein 40
mm9_v1_chr14_+_56590264_56590269	2.28124	FOX{I1,J2}.p2	AF361939|Cma2|545055|chymase 2, mast cell	NM_001024714|Cma2|545055|chymase 2, mast cell	BC139236|Cma2|545055|chymase 2, mast cell	BC139237|Cma2|545055|chymase 2, mast cell
mm9_v1_chr4_+_133109291_133109339	2.28071	FOX{I1,J2}.p2	AK004930|Nr0b2|23957|nuclear receptor subfamily 0, group B, member 2	BC019540|Nr0b2|23957|nuclear receptor subfamily 0, group B, member 2	NM_011850|Nr0b2|23957|nuclear receptor subfamily 0, group B, member 2	AY360323|Nr0b2|23957|nuclear receptor subfamily 0, group B, member 2	AY360324|Nr0b2|23957|nuclear receptor subfamily 0, group B, member 2
mm9_v1_chr6_+_17616617_17616660	2.27957	FOX{I1,J2}.p2	AK004237|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2
mm9_v1_chr5_+_32794685_32794762	2.27654	FOX{I1,J2}.p2	AK017392|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr3_+_94641479_94641499	2.2765	FOX{I1,J2}.p2	NM_001165948|Pogz|229584|pogo transposable element with ZNF domain	NM_172683|Pogz|229584|pogo transposable element with ZNF domain	BC065134|Pogz|229584|pogo transposable element with ZNF domain	BC066108|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr16_-_13984713_13984713	2.27473	FOX{I1,J2}.p2	AK017110|Ifitm7|74482|interferon induced transmembrane protein 7	NM_028968|Ifitm7|74482|interferon induced transmembrane protein 7
mm9_v1_chr2_+_32612744_32612905	2.27469	FOX{I1,J2}.p2	BC003466|Tor2a|30933|torsin family 2, member A	BC024469|Tor2a|30933|torsin family 2, member A	NM_152800|Tor2a|30933|torsin family 2, member A	AK170979|Tor2a|30933|torsin family 2, member A	AK171247|Tor2a|30933|torsin family 2, member A	AK162719|Tor2a|30933|torsin family 2, member A	AK019246|Tor2a|30933|torsin family 2, member A	AK185253|Tor2a|30933|torsin family 2, member A	AK189495|Tor2a|30933|torsin family 2, member A
mm9_v1_chr1_-_89291303_89291307	2.2745	FOX{I1,J2}.p2	NM_001110227|Kcnj13|100040591|potassium inwardly-rectifying channel, subfamily J, member 13
mm9_v1_chr14_+_26661614_26661734	2.27021	FOX{I1,J2}.p2	NM_013469|Anxa11|11744|annexin A11	U65986|Anxa11|11744|annexin A11	AK044203|Anxa11|11744|annexin A11	AK140375|Anxa11|11744|annexin A11	AK170850|Anxa11|11744|annexin A11	AK137158|Anxa11|11744|annexin A11	BC012875|Anxa11|11744|annexin A11
mm9_v1_chr17_-_36463086_36463094	2.26576	FOX{I1,J2}.p2	BC104321|H2-M10.1|14985|histocompatibility 2, M region locus 10.1	BC152395|H2-M10.1|14985|histocompatibility 2, M region locus 10.1	BC104320|H2-M10.1|14985|histocompatibility 2, M region locus 10.1	AF539597|H2-M10.1|14985|histocompatibility 2, M region locus 10.1	AY211079|H2-M10.1|14985|histocompatibility 2, M region locus 10.1	BC119458|H2-M10.1|14985|histocompatibility 2, M region locus 10.1	NM_013544|H2-M10.1|14985|histocompatibility 2, M region locus 10.1
mm9_v1_chr10_-_26095736_26095813	2.26461	FOX{I1,J2}.p2	BC082309|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	AK031398|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr2_-_164658954_164659095	2.26042	FOX{I1,J2}.p2	AK004524|Neurl2|415115|neuralized-like 2 (Drosophila)	NM_001082974|Neurl2|415115|neuralized-like 2 (Drosophila)
mm9_v1_chr14_+_33599148_33599148	2.25601	FOX{I1,J2}.p2	AK007434|1810011H11Rik|69069|RIKEN cDNA 1810011H11 gene	NM_001163616|1810011H11Rik|69069|RIKEN cDNA 1810011H11 gene
mm9_v1_chr12_+_72456427_72456435	2.25518	FOX{I1,J2}.p2	
mm9_v1_chrX_+_12870471_12870561	2.25262	FOX{I1,J2}.p2	AK002917|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm9_v1_chr10_+_41530379_41530379	2.25166	FOX{I1,J2}.p2	BC100403|Sesn1|140742|sestrin 1	NM_001162908|Sesn1|140742|sestrin 1
mm9_v1_chr8_-_11635748_11635782	2.2513	FOX{I1,J2}.p2	AK031808|Ankrd10|102334|ankyrin repeat domain 10	AK033623|Ankrd10|102334|ankyrin repeat domain 10	AK038156|Ankrd10|102334|ankyrin repeat domain 10	AK042500|Ankrd10|102334|ankyrin repeat domain 10	AK081754|Ankrd10|102334|ankyrin repeat domain 10	AK082875|Ankrd10|102334|ankyrin repeat domain 10	AK084456|Ankrd10|102334|ankyrin repeat domain 10	AK143253|Ankrd10|102334|ankyrin repeat domain 10	NM_001167967|Ankrd10|102334|ankyrin repeat domain 10	NM_133971|Ankrd10|102334|ankyrin repeat domain 10	AK050983|Ankrd10|102334|ankyrin repeat domain 10
mm9_v1_chr5_-_123214252_123214302	2.25038	FOX{I1,J2}.p2	AF453383|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta	BC023103|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta	NM_145358|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr8_-_64601861_64601991	2.24762	FOX{I1,J2}.p2	BC125319|Anxa10|26359|annexin A10	BC132207|Anxa10|26359|annexin A10	AJ238978|Anxa10|26359|annexin A10	AK168715|Anxa10|26359|annexin A10	NM_001136089|Anxa10|26359|annexin A10	AK131880|Anxa10|26359|annexin A10	AK008772|Anxa10|26359|annexin A10	AK008808|Anxa10|26359|annexin A10	AK020288|Anxa10|26359|annexin A10	NM_011922|Anxa10|26359|annexin A10	AK018597|Anxa10|26359|annexin A10	AK008930|Anxa10|26359|annexin A10
mm9_v1_chr7_+_25689409_25689425	2.24102	FOX{I1,J2}.p2	BC012488|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr14_+_61351770_61351875	2.2404	FOX{I1,J2}.p2	AK151394|Spata13|219140|spermatogenesis associated 13
mm9_v1_chr1_+_130140700_130141098	2.23777	FOX{I1,J2}.p2	AK029431|Ubxn4|67812|UBX domain protein 4	BC019795|Ubxn4|67812|UBX domain protein 4	BC012271|Ubxn4|67812|UBX domain protein 4	NM_026390|Ubxn4|67812|UBX domain protein 4	AK011233|Ubxn4|67812|UBX domain protein 4	AK012824|Ubxn4|67812|UBX domain protein 4	AK019371|Ubxn4|67812|UBX domain protein 4	AK148333|Ubxn4|67812|UBX domain protein 4	AK032206|Ubxn4|67812|UBX domain protein 4	AK147795|Ubxn4|67812|UBX domain protein 4	AK075716|Ubxn4|67812|UBX domain protein 4
mm9_v1_chr10_-_116018526_116018566	2.23715	FOX{I1,J2}.p2	AK149767|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	BC043133|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK167834|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK202363|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK172132|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	BC063105|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK078121|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	AK011231|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	BC065171|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	NM_001037846|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	NM_001037847|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	NM_001037848|Cnot2|72068|CCR4-NOT transcription complex, subunit 2	NM_028082|Cnot2|72068|CCR4-NOT transcription complex, subunit 2
mm9_v1_chr1_+_24685475_24685527	2.23285	FOX{I1,J2}.p2	BC027774|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr18_-_85120875_85120936	2.22749	FOX{I1,J2}.p2	AK017477|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	BC034297|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK029037|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK012203|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	AK032468|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene	NM_025969|1700034H14Rik|67105|RIKEN cDNA 1700034H14 gene
mm9_v1_chr7_-_99889932_99889979	2.22594	FOX{I1,J2}.p2	AK014157|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK051992|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK018467|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK019505|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK084903|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK084084|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK145781|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene
mm9_v1_chrX_-_70342343_70342433	2.22057	FOX{I1,J2}.p2	BC107255|Xlr3a|22445|X-linked lymphocyte-regulated 3A	BC107283|Xlr3a|22445|X-linked lymphocyte-regulated 3A	BC127145|Xlr3a|22445|X-linked lymphocyte-regulated 3A	BC127146|Xlr3a|22445|X-linked lymphocyte-regulated 3A	BC093495|Xlr3a|22445|X-linked lymphocyte-regulated 3A	BC003812|Xlr3a|22445|X-linked lymphocyte-regulated 3A	NM_001110784|Xlr3a|22445|X-linked lymphocyte-regulated 3A
mm9_v1_chr8_-_8667108_8667134	2.21965	FOX{I1,J2}.p2	AK034581|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr17_-_13060997_13061008	2.21811	FOX{I1,J2}.p2	AK030261|Mas1|17171|MAS1 oncogene	AK015036|Mas1|17171|MAS1 oncogene	AK030265|Mas1|17171|MAS1 oncogene	NM_008552|Mas1|17171|MAS1 oncogene
mm9_v1_chr4_-_107890526_107890526	2.21538	FOX{I1,J2}.p2	NM_001167936|Zyg11a|230590|zyg-11 homolog A (C. elegans)
mm9_v1_chr2_+_78709363_78709419	2.21374	FOX{I1,J2}.p2	AK168072|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)	AK048227|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)	AK076011|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)	X92664|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)
mm9_v1_chr7_-_94641859_94642021	2.21116	FOX{I1,J2}.p2	M26729|Tyr|22173|tyrosinase	AK148341|Tyr|22173|tyrosinase	BC079678|Tyr|22173|tyrosinase	AK148432|Tyr|22173|tyrosinase	D00440|Tyr|22173|tyrosinase	M24560|Tyr|22173|tyrosinase	NM_011661|Tyr|22173|tyrosinase	D00131|Tyr|22173|tyrosinase	AK148172|Tyr|22173|tyrosinase	AK148357|Tyr|22173|tyrosinase	AK014619|Tyr|22173|tyrosinase	AY526904|Tyr|22173|tyrosinase	X12782|Tyr|22173|tyrosinase	M20234|Tyr|22173|tyrosinase
mm9_v1_chr1_+_65973093_65973127	2.20837	FOX{I1,J2}.p2	AK013953|Crygf|12969|crystallin, gamma F	NM_027010|Crygf|12969|crystallin, gamma F	BC056453|Crygf|12969|crystallin, gamma F	M64543|Crygf|12969|crystallin, gamma F
mm9_v1_chr7_+_25689359_25689364	2.20667	FOX{I1,J2}.p2	NM_001130152|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr1_+_40082070_40082114	2.2058	FOX{I1,J2}.p2	AK159799|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4
mm9_v1_chr7_-_90803895_90803940	2.20455	FOX{I1,J2}.p2	AF017111|Il16|16170|interleukin 16	AK137802|Il16|16170|interleukin 16	AK169551|Il16|16170|interleukin 16	AK038319|Il16|16170|interleukin 16
mm9_v1_chr6_-_16848352_16848440	2.20036	FOX{I1,J2}.p2	AK156327|Tcfec|21426|transcription factor EC	AK159579|Tcfec|21426|transcription factor EC	BC052832|Tcfec|21426|transcription factor EC	BC064770|Tcfec|21426|transcription factor EC	AK137141|Tcfec|21426|transcription factor EC	AF077742|Tcfec|21426|transcription factor EC	AK157426|Tcfec|21426|transcription factor EC	NM_031198|Tcfec|21426|transcription factor EC
mm9_v1_chr11_+_100721765_100721860	2.2002	FOX{I1,J2}.p2	NM_001164062|Stat5a|20850|signal transducer and activator of transcription 5A	AK090254|Stat5a|20850|signal transducer and activator of transcription 5A	BC056647|Stat5a|20850|signal transducer and activator of transcription 5A	Z48538|Stat5a|20850|signal transducer and activator of transcription 5A	AY299491|Stat5a|20850|signal transducer and activator of transcription 5A	AY299492|Stat5a|20850|signal transducer and activator of transcription 5A	EU249543|Stat5a|20850|signal transducer and activator of transcription 5A	AK154070|Stat5a|20850|signal transducer and activator of transcription 5A	BC008998|Stat5a|20850|signal transducer and activator of transcription 5A
mm9_v1_chr2_-_7002287_7002310	2.19807	FOX{I1,J2}.p2	AK137292|Celf2|14007|CUGBP, Elav-like family member 2	AK164914|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr3_+_95733163_95733182	2.19609	FOX{I1,J2}.p2	AK172146|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	NM_023210|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr6_+_134874663_134874674	2.19232	FOX{I1,J2}.p2	AK154276|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK169586|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B
mm9_v1_chr5_+_11594955_11594955	2.1921	FOX{I1,J2}.p2	BC110565|Gm6460|623898|predicted gene 6460	NM_001037919|Gm6460|623898|predicted gene 6460
mm9_v1_chr6_-_129573858_129573881	2.18723	FOX{I1,J2}.p2	AF030313|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	NM_001083322|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1	AK170499|Klrk1|27007|killer cell lectin-like receptor subfamily K, member 1
mm9_v1_chr16_-_97391923_97391986	2.18358	FOX{I1,J2}.p2	AF315558|Dscam|13508|Down syndrome cell adhesion molecule
mm9_v1_chr1_+_154622471_154622540	2.1804	FOX{I1,J2}.p2	
mm9_v1_chr3_+_63780020_63780051	2.17917	FOX{I1,J2}.p2	AK146654|Gmps|229363|guanine monophosphate synthetase
mm9_v1_chr2_+_92025639_92025639	2.17708	FOX{I1,J2}.p2	AK037174|Phf21a|192285|PHD finger protein 21A	NM_001109691|Phf21a|192285|PHD finger protein 21A
mm9_v1_chr2_-_73291933_73291985	2.17612	FOX{I1,J2}.p2	AK156547|Wipf1|215280|WAS/WASL interacting protein family, member 1
mm9_v1_chr9_+_75623899_75624064	2.17499	FOX{I1,J2}.p2	L41145|Bmp5|12160|bone morphogenetic protein 5	BC100751|Bmp5|12160|bone morphogenetic protein 5	BC100752|Bmp5|12160|bone morphogenetic protein 5	BC100753|Bmp5|12160|bone morphogenetic protein 5	BC100754|Bmp5|12160|bone morphogenetic protein 5	AK160412|Bmp5|12160|bone morphogenetic protein 5
mm9_v1_chr15_-_5193681_5193830	2.17357	FOX{I1,J2}.p2	BC009023|Ptger4|19219|prostaglandin E receptor 4 (subtype EP4)	NM_001136079|Ptger4|19219|prostaglandin E receptor 4 (subtype EP4)	D13458|Ptger4|19219|prostaglandin E receptor 4 (subtype EP4)	NM_008965|Ptger4|19219|prostaglandin E receptor 4 (subtype EP4)
mm9_v1_chr16_+_45610535_45610644	2.17028	FOX{I1,J2}.p2	AK036553|Gcet2|14525|germinal center expressed transcript 2	NM_001159297|Gcet2|14525|germinal center expressed transcript 2	NM_008099|Gcet2|14525|germinal center expressed transcript 2	U13263|Gcet2|14525|germinal center expressed transcript 2	BC099585|Gcet2|14525|germinal center expressed transcript 2	AY500830|Gcet2|14525|germinal center expressed transcript 2
mm9_v1_chr2_+_69588414_69588564	2.16799	FOX{I1,J2}.p2	AK079931|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)	AK045812|Ppig|228005|peptidyl-prolyl isomerase G (cyclophilin G)
mm9_v1_chr3_+_101814059_101814199	2.16676	FOX{I1,J2}.p2	S40532|Nhlh2|18072|nescient helix loop helix 2	AK031747|Nhlh2|18072|nescient helix loop helix 2	NM_178777|Nhlh2|18072|nescient helix loop helix 2	AK053837|Nhlh2|18072|nescient helix loop helix 2	AK053046|Nhlh2|18072|nescient helix loop helix 2	AK082728|Nhlh2|18072|nescient helix loop helix 2	AK084160|Nhlh2|18072|nescient helix loop helix 2	AK084308|Nhlh2|18072|nescient helix loop helix 2	BC058413|Nhlh2|18072|nescient helix loop helix 2
mm9_v1_chr10_+_14480024_14480094	2.1613	FOX{I1,J2}.p2	BC144884|Nmbr|18101|neuromedin B receptor	BC144885|Nmbr|18101|neuromedin B receptor	BC119237|Nmbr|18101|neuromedin B receptor	NM_008703|Nmbr|18101|neuromedin B receptor
mm9_v1_chr11_+_77499638_77499656	2.15788	FOX{I1,J2}.p2	AK030113|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK160601|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	NM_001024205|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK170764|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2	AK122494|Nufip2|68564|nuclear fragile X mental retardation protein interacting protein 2
mm9_v1_chr16_-_64786146_64786199	2.14883	FOX{I1,J2}.p2	BC068018|Zfp654|72020|zinc finger protein 654	NM_028059|Zfp654|72020|zinc finger protein 654	AK005508|Zfp654|72020|zinc finger protein 654
mm9_v1_chr3_+_63780058_63780135	2.14487	FOX{I1,J2}.p2	AK143197|Gmps|229363|guanine monophosphate synthetase	NM_001033300|Gmps|229363|guanine monophosphate synthetase	AK169701|Gmps|229363|guanine monophosphate synthetase	AK169043|Gmps|229363|guanine monophosphate synthetase	AK167857|Gmps|229363|guanine monophosphate synthetase	AK049755|Gmps|229363|guanine monophosphate synthetase	BC138411|Gmps|229363|guanine monophosphate synthetase	BC138412|Gmps|229363|guanine monophosphate synthetase	AK168239|Gmps|229363|guanine monophosphate synthetase
mm9_v1_chr3_-_20022409_20022533	2.14344	FOX{I1,J2}.p2	AK207016|Gyg|27357|glycogenin	AK206608|Gyg|27357|glycogenin	AK190314|Gyg|27357|glycogenin	AK210267|Gyg|27357|glycogenin
mm9_v1_chr19_-_4785312_4785318	2.14219	FOX{I1,J2}.p2	
mm9_v1_chr9_-_109986879_109987026	2.14085	FOX{I1,J2}.p2	AK193613|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr12_-_80397239_80397289	2.13352	FOX{I1,J2}.p2	AK220333|Zfyve26|211978|zinc finger, FYVE domain containing 26	BC141359|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK132344|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK041668|Zfyve26|211978|zinc finger, FYVE domain containing 26	AK135518|Zfyve26|211978|zinc finger, FYVE domain containing 26	NM_001008550|Zfyve26|211978|zinc finger, FYVE domain containing 26
mm9_v1_chr18_-_12279951_12280047	2.12821	FOX{I1,J2}.p2	BC094382|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	NM_178801|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	BC137621|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK038472|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK037547|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK038419|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK031517|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK144963|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK051727|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene
mm9_v1_chr5_+_121913189_121913205	2.12561	FOX{I1,J2}.p2	NM_001161626|Tmem116|77462|transmembrane protein 116	NM_001161627|Tmem116|77462|transmembrane protein 116	BC019151|Tmem116|77462|transmembrane protein 116
mm9_v1_chr1_+_152240466_152240735	2.10864	FOX{I1,J2}.p2	BC108349|Tpr|108989|translocated promoter region	BC021320|Tpr|108989|translocated promoter region	BC060955|Tpr|108989|translocated promoter region	AK157974|Tpr|108989|translocated promoter region
mm9_v1_chr2_-_132403964_132404008	2.10711	FOX{I1,J2}.p2	AK031658|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_001042671|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_001042672|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_028802|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm9_v1_chr14_-_73725546_73725555	2.10472	FOX{I1,J2}.p2	M26391|Rb1|19645|retinoblastoma 1
mm9_v1_chr6_-_3295980_3296101	2.10163	FOX{I1,J2}.p2	AK035387|9530028C05|330256|hypothetical protein 9530028C05
mm9_v1_chr11_+_49058980_49059003	2.09624	FOX{I1,J2}.p2	L07037|Mgat1|17308|mannoside acetylglucosaminyltransferase 1
mm9_v1_chr7_-_35841450_35841562	2.09556	FOX{I1,J2}.p2	AK171859|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	X55499|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	AK157391|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	AK159544|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	AB012273|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma	BC011319|Cebpg|12611|CCAAT/enhancer binding protein (C/EBP), gamma
mm9_v1_chr3_-_83645593_83645688	2.08778	FOX{I1,J2}.p2	BC014693|Tlr2|24088|toll-like receptor 2
mm9_v1_chr6_-_115709004_115709016	2.08578	FOX{I1,J2}.p2	NM_144805|Tmem40|94346|transmembrane protein 40
mm9_v1_chr3_+_95462705_95462778	2.08285	FOX{I1,J2}.p2	BC003839|Mcl1|17210|myeloid cell leukemia sequence 1	BC021638|Mcl1|17210|myeloid cell leukemia sequence 1	BC005427|Mcl1|17210|myeloid cell leukemia sequence 1	AK159504|Mcl1|17210|myeloid cell leukemia sequence 1	U35623|Mcl1|17210|myeloid cell leukemia sequence 1	GU182318|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr14_+_48092244_48092299	2.08047	FOX{I1,J2}.p2	BC049155|Fbxo34|78938|F-box protein 34	AK013711|Fbxo34|78938|F-box protein 34
mm9_v1_chr15_-_20596495_20596504	2.07989	FOX{I1,J2}.p2	BC108959|Acot10|64833|acyl-CoA thioesterase 10	BC108960|Acot10|64833|acyl-CoA thioesterase 10	AJ238894|Acot10|64833|acyl-CoA thioesterase 10	NM_022816|Acot10|64833|acyl-CoA thioesterase 10
mm9_v1_chrX_-_71618617_71618655	2.07955	FOX{I1,J2}.p2	BC023050|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	AK041958|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm9_v1_chr14_+_27707789_27707789	2.07858	FOX{I1,J2}.p2	AK052884|Asb14|142687|ankyrin repeat and SOCS box-containing 14	NM_001170748|Asb14|142687|ankyrin repeat and SOCS box-containing 14	NM_080856|Asb14|142687|ankyrin repeat and SOCS box-containing 14
mm9_v1_chr11_-_97643718_97643767	2.07753	FOX{I1,J2}.p2	NM_022891|Rpl23|65019|ribosomal protein L23
mm9_v1_chr5_+_117724658_117724663	2.07524	FOX{I1,J2}.p2	AK013486|Taok3|330177|TAO kinase 3
mm9_v1_chr16_+_32914183_32914232	2.07298	FOX{I1,J2}.p2	AK155550|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	NM_001081255|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK076529|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC151058|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC157924|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC172144|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK133482|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3
mm9_v1_chr7_-_87857062_87857123	2.07145	FOX{I1,J2}.p2	
mm9_v1_chr6_-_56873822_56873940	2.06787	FOX{I1,J2}.p2	AK011894|Nt5c3|107569|5'-nucleotidase, cytosolic III	AK011525|Nt5c3|107569|5'-nucleotidase, cytosolic III	NM_026004|Nt5c3|107569|5'-nucleotidase, cytosolic III
mm9_v1_chr5_-_138066184_138066305	2.06497	FOX{I1,J2}.p2	AK016870|Fbxo24|71176|F-box protein 24	NM_027708|Fbxo24|71176|F-box protein 24
mm9_v1_chr5_+_137169015_137169047	2.06207	FOX{I1,J2}.p2	NM_021611|Myl10|59310|myosin, light chain 10, regulatory	X65981|Myl10|59310|myosin, light chain 10, regulatory	BC125528|Myl10|59310|myosin, light chain 10, regulatory
mm9_v1_chr19_+_12752655_12752655	2.06065	FOX{I1,J2}.p2	BC065104|Olfr1443|258693|olfactory receptor 1443	NM_146698|Olfr1443|258693|olfactory receptor 1443
mm9_v1_chr14_-_52780511_52780625	2.06041	FOX{I1,J2}.p2	AK082901|Supt16h|114741|suppressor of Ty 16 homolog (S. cerevisiae)
mm9_v1_chr13_+_30228397_30228535	2.05827	FOX{I1,J2}.p2	BC024653|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK020281|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK033388|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK137755|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK146984|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AB297382|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AB305045|Mboat1|218121|membrane bound O-acyltransferase domain containing 1
mm9_v1_chr11_-_115489392_115489479	2.05728	FOX{I1,J2}.p2	AK172622|Slc25a19|67283|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	AK168145|Slc25a19|67283|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	BC018167|Slc25a19|67283|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	AK005710|Slc25a19|67283|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	NM_026071|Slc25a19|67283|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	BC046767|Slc25a19|67283|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm9_v1_chr1_+_87918516_87918535	2.05439	FOX{I1,J2}.p2	NM_001122732|Spata3|70060|spermatogenesis associated 3	NM_027029|Spata3|70060|spermatogenesis associated 3	NM_027300|Spata3|70060|spermatogenesis associated 3	NM_028647|Spata3|70060|spermatogenesis associated 3	BC048516|Spata3|70060|spermatogenesis associated 3	AF399971|Spata3|70060|spermatogenesis associated 3	AK005880|Spata3|70060|spermatogenesis associated 3	AK015193|Spata3|70060|spermatogenesis associated 3	AK131709|Spata3|70060|spermatogenesis associated 3	AK006491|Spata3|70060|spermatogenesis associated 3	EF546784|Spata3|70060|spermatogenesis associated 3	EU259321|Spata3|70060|spermatogenesis associated 3	BC061025|Spata3|70060|spermatogenesis associated 3
mm9_v1_chr9_-_96632093_96632093	2.05066	FOX{I1,J2}.p2	AK044467|Zbtb38|245007|zinc finger and BTB domain containing 38	NM_175537|Zbtb38|245007|zinc finger and BTB domain containing 38
mm9_v1_chr5_+_104599721_104599730	2.0472	FOX{I1,J2}.p2	U67916|Dspp|666279|dentin sialophosphoprotein	BC116172|Dspp|666279|dentin sialophosphoprotein	BC116173|Dspp|666279|dentin sialophosphoprotein	BC129802|Dspp|666279|dentin sialophosphoprotein	NM_010080|Dspp|666279|dentin sialophosphoprotein
mm9_v1_chr7_-_34926055_34926067	2.04713	FOX{I1,J2}.p2	AK213025|Uba2|50995|ubiquitin-like modifier activating enzyme 2
mm9_v1_chr2_+_24200890_24200907	2.04686	FOX{I1,J2}.p2	AK155641|Il1rn|16181|interleukin 1 receptor antagonist	NM_001039701|Il1rn|16181|interleukin 1 receptor antagonist	AK155888|Il1rn|16181|interleukin 1 receptor antagonist	AK157157|Il1rn|16181|interleukin 1 receptor antagonist	AK171385|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chr12_+_34000269_34000282	2.04243	FOX{I1,J2}.p2	AK036472|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr1_+_175350728_175350734	2.04236	FOX{I1,J2}.p2	BC033443|Aim2|383619|absent in melanoma 2	AK050724|Aim2|383619|absent in melanoma 2	NM_001013779|Aim2|383619|absent in melanoma 2
mm9_v1_chr17_-_6943173_6943193	2.03803	FOX{I1,J2}.p2	AK207973|Ezr|22350|ezrin	AK207113|Ezr|22350|ezrin
mm9_v1_chr13_+_35751730_35751781	2.03744	FOX{I1,J2}.p2	NM_009881|Cdyl|12593|chromodomain protein, Y chromosome-like	AF081260|Cdyl|12593|chromodomain protein, Y chromosome-like	AF081261|Cdyl|12593|chromodomain protein, Y chromosome-like	BC055103|Cdyl|12593|chromodomain protein, Y chromosome-like
mm9_v1_chr3_+_95465860_95465866	2.03701	FOX{I1,J2}.p2	AK160634|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr2_+_59322709_59322728	2.03658	FOX{I1,J2}.p2	NM_029723|Dapl1|76747|death associated protein-like 1	AK009567|Dapl1|76747|death associated protein-like 1	BC116916|Dapl1|76747|death associated protein-like 1	BC116920|Dapl1|76747|death associated protein-like 1	BC063096|Dapl1|76747|death associated protein-like 1	BC052745|Dapl1|76747|death associated protein-like 1
mm9_v1_chr9_+_108462759_108462899	2.03586	FOX{I1,J2}.p2	AK169129|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK169788|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK146362|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK151706|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK166667|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	M33934|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK002676|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK011777|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK143505|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK150713|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK151233|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK152691|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK160569|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	AK159822|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	BC052671|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	BC010314|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	NM_011830|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2	M98333|Impdh2|23918|inosine 5'-phosphate dehydrogenase 2
mm9_v1_chr11_-_54769601_54769632	2.03444	FOX{I1,J2}.p2	AK135338|Tnip1|57783|TNFAIP3 interacting protein 1
mm9_v1_chr19_+_5041341_5041422	2.03308	FOX{I1,J2}.p2	AF233580|Brms1|107392|breast cancer metastasis-suppressor 1	AK076729|Brms1|107392|breast cancer metastasis-suppressor 1	BC016108|Brms1|107392|breast cancer metastasis-suppressor 1	NM_134155|Brms1|107392|breast cancer metastasis-suppressor 1	BC003485|Brms1|107392|breast cancer metastasis-suppressor 1
mm9_v1_chr5_-_73033990_73033990	2.03153	FOX{I1,J2}.p2	NM_007723|Cnga1|12788|cyclic nucleotide gated channel alpha 1
mm9_v1_chr8_+_36740640_36740782	2.03122	FOX{I1,J2}.p2	AK010068|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1
mm9_v1_chr6_-_99216494_99216530	2.02435	FOX{I1,J2}.p2	BC064764|Foxp1|108655|forkhead box P1	AK171994|Foxp1|108655|forkhead box P1	BC065386|Foxp1|108655|forkhead box P1	NM_001197321|Foxp1|108655|forkhead box P1	AK040800|Foxp1|108655|forkhead box P1
mm9_v1_chr11_+_77796215_77796321	2.02	FOX{I1,J2}.p2	AK170155|Phf12|268448|PHD finger protein 12	AK089226|Phf12|268448|PHD finger protein 12	AK010807|Phf12|268448|PHD finger protein 12	AK155354|Phf12|268448|PHD finger protein 12	AK053787|Phf12|268448|PHD finger protein 12	NM_174852|Phf12|268448|PHD finger protein 12
mm9_v1_chr17_-_37712365_37712392	2.01733	FOX{I1,J2}.p2	NM_146289|Olfr113|258286|olfactory receptor 113	BC132178|Olfr113|258286|olfactory receptor 113	BC132180|Olfr113|258286|olfactory receptor 113
mm9_v1_chr13_-_38069696_38069810	2.01543	FOX{I1,J2}.p2	
mm9_v1_chr8_-_3854285_3854307	2.01524	FOX{I1,J2}.p2	AF373412|Cd209e|170780|CD209e antigen	BC107188|Cd209e|170780|CD209e antigen	BC107189|Cd209e|170780|CD209e antigen	NM_130905|Cd209e|170780|CD209e antigen	AK040917|Cd209e|170780|CD209e antigen
mm9_v1_chr16_-_36408420_36408542	2.01247	FOX{I1,J2}.p2	M92418|Stfa2|20862|stefin A2	NM_001082545|Stfa2|20862|stefin A2	BC138004|Stfa2|20862|stefin A2
mm9_v1_chr8_-_25686797_25686823	2.00665	FOX{I1,J2}.p2	BC026393|Ido2|209176|indoleamine 2,3-dioxygenase 2	EF137182|Ido2|209176|indoleamine 2,3-dioxygenase 2	NM_145949|Ido2|209176|indoleamine 2,3-dioxygenase 2
mm9_v1_chr19_+_39585311_39585360	2.00448	FOX{I1,J2}.p2	BC139290|Cyp2c39|13098|cytochrome P450, family 2, subfamily c, polypeptide 39	BC139291|Cyp2c39|13098|cytochrome P450, family 2, subfamily c, polypeptide 39	NM_010003|Cyp2c39|13098|cytochrome P450, family 2, subfamily c, polypeptide 39	BC057911|Cyp2c39|13098|cytochrome P450, family 2, subfamily c, polypeptide 39	AF047726|Cyp2c39|13098|cytochrome P450, family 2, subfamily c, polypeptide 39
mm9_v1_chr2_-_70856430_70856434	2.00115	FOX{I1,J2}.p2	NM_001110512|Mettl8|228019|methyltransferase like 8	DQ230973|Mettl8|228019|methyltransferase like 8	DQ230974|Mettl8|228019|methyltransferase like 8
mm9_v1_chrX_+_100516736_100516748	1.99792	FOX{I1,J2}.p2	L08061|Cdx4|12592|caudal type homeobox 4	NM_007674|Cdx4|12592|caudal type homeobox 4	BC119158|Cdx4|12592|caudal type homeobox 4
mm9_v1_chr7_-_133727793_133727820	1.99598	FOX{I1,J2}.p2	NM_001146311|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC047120|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm9_v1_chr18_-_35821788_35821845	1.9943	FOX{I1,J2}.p2	BC060950|Spata24|71242|spermatogenesis associated 24	AK017218|Spata24|71242|spermatogenesis associated 24	AK016341|Spata24|71242|spermatogenesis associated 24	AK012241|Spata24|71242|spermatogenesis associated 24	AY730532|Spata24|71242|spermatogenesis associated 24	NM_027733|Spata24|71242|spermatogenesis associated 24	NM_029485|Spata24|71242|spermatogenesis associated 24
mm9_v1_chr2_-_173044305_173044431	1.99189	FOX{I1,J2}.p2	AK008179|Zbp1|58203|Z-DNA binding protein 1	AX775969|Zbp1|58203|Z-DNA binding protein 1	AX775971|Zbp1|58203|Z-DNA binding protein 1	AF136520|Zbp1|58203|Z-DNA binding protein 1	BC020033|Zbp1|58203|Z-DNA binding protein 1	AK157215|Zbp1|58203|Z-DNA binding protein 1	NM_001139519|Zbp1|58203|Z-DNA binding protein 1	NM_021394|Zbp1|58203|Z-DNA binding protein 1
mm9_v1_chr9_-_7835107_7835268	1.9889	FOX{I1,J2}.p2	BC145985|Birc2|11797|baculoviral IAP repeat-containing 2	NM_007465|Birc2|11797|baculoviral IAP repeat-containing 2	U88909|Birc2|11797|baculoviral IAP repeat-containing 2	BC033480|Birc2|11797|baculoviral IAP repeat-containing 2
mm9_v1_chr16_+_4940800_4940851	1.98546	FOX{I1,J2}.p2	
mm9_v1_chr7_-_148202779_148202790	1.98348	FOX{I1,J2}.p2	BC104338|Ifitm6|213002|interferon induced transmembrane protein 6	BC104339|Ifitm6|213002|interferon induced transmembrane protein 6	NM_001033632|Ifitm6|213002|interferon induced transmembrane protein 6
mm9_v1_chr5_-_75440460_75440521	1.98301	FOX{I1,J2}.p2	BC116971|Chic2|74277|cysteine-rich hydrophobic domain 2	BC116973|Chic2|74277|cysteine-rich hydrophobic domain 2
mm9_v1_chr19_+_3323262_3323319	1.98236	FOX{I1,J2}.p2	NM_013495|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver	BC054791|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver
mm9_v1_chr15_-_8273428_8273486	1.98209	FOX{I1,J2}.p2	AK135347|Nipbl|71175|Nipped-B homolog (Drosophila)
mm9_v1_chr7_+_20104079_20104079	1.98013	FOX{I1,J2}.p2	BC118925|Nkpd1|69547|NTPase, KAP family P-loop domain containing 1	NM_027116|Nkpd1|69547|NTPase, KAP family P-loop domain containing 1
mm9_v1_chrX_-_103680566_103680612	1.98001	FOX{I1,J2}.p2	BC085176|Fndc3c1|333564|fibronectin type III domain containing 3C1	BC076625|Fndc3c1|333564|fibronectin type III domain containing 3C1	NM_001007580|Fndc3c1|333564|fibronectin type III domain containing 3C1	DQ192038|Fndc3c1|333564|fibronectin type III domain containing 3C1
mm9_v1_chr14_-_56721304_56721410	1.9773	FOX{I1,J2}.p2	BC125511|Ctsg|13035|cathepsin G	BC125513|Ctsg|13035|cathepsin G	NM_007800|Ctsg|13035|cathepsin G	X78544|Ctsg|13035|cathepsin G
mm9_v1_chr4_-_46402288_46402309	1.97586	FOX{I1,J2}.p2	AK044073|5830415F09Rik|74753|RIKEN cDNA 5830415F09 gene	AK153576|5830415F09Rik|74753|RIKEN cDNA 5830415F09 gene	NM_029086|5830415F09Rik|74753|RIKEN cDNA 5830415F09 gene	BC092543|5830415F09Rik|74753|RIKEN cDNA 5830415F09 gene	AK017931|5830415F09Rik|74753|RIKEN cDNA 5830415F09 gene	AK052584|5830415F09Rik|74753|RIKEN cDNA 5830415F09 gene
mm9_v1_chr13_+_24893310_24893891	1.97489	FOX{I1,J2}.p2	AK035718|BC005537|79555|cDNA sequence BC005537	NM_024473|BC005537|79555|cDNA sequence BC005537	AK078765|BC005537|79555|cDNA sequence BC005537	BC005537|BC005537|79555|cDNA sequence BC005537
mm9_v1_chr6_+_21899978_21900058	1.97219	FOX{I1,J2}.p2	AK146145|Ing3|71777|inhibitor of growth family, member 3	AK030364|Ing3|71777|inhibitor of growth family, member 3
mm9_v1_chr1_+_182682561_182682684	1.97044	FOX{I1,J2}.p2	AK018392|Acbd3|170760|acyl-Coenzyme A binding domain containing 3
mm9_v1_chr9_+_3532302_3532353	1.96659	FOX{I1,J2}.p2	NM_001033322|Gucy1a2|234889|guanylate cyclase 1, soluble, alpha 2
mm9_v1_chr19_+_9022763_9022826	1.95912	FOX{I1,J2}.p2	AK003701|Mta2|23942|metastasis-associated gene family, member 2	AK186547|Mta2|23942|metastasis-associated gene family, member 2
mm9_v1_chr2_+_85791221_85791221	1.9567	FOX{I1,J2}.p2	NM_001011774|Olfr1028|257936|olfactory receptor 1028
mm9_v1_chr3_-_79541715_79541801	1.95604	FOX{I1,J2}.p2	AY509975|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1	NM_212452|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1	AK137655|Rxfp1|381489|relaxin/insulin-like family peptide receptor 1
mm9_v1_chr19_-_10752469_10752560	1.95588	FOX{I1,J2}.p2	AF240776|Pga5|58803|pepsinogen 5, group I	AK004109|Pga5|58803|pepsinogen 5, group I	AK168924|Pga5|58803|pepsinogen 5, group I	BC119523|Pga5|58803|pepsinogen 5, group I	AK053965|Pga5|58803|pepsinogen 5, group I	NM_021453|Pga5|58803|pepsinogen 5, group I
mm9_v1_chr19_+_6184321_6184495	1.95561	FOX{I1,J2}.p2	AK028710|1700123I01Rik|622554|RIKEN cDNA 1700123I01 gene	AK007250|1700123I01Rik|622554|RIKEN cDNA 1700123I01 gene	NM_001165919|1700123I01Rik|622554|RIKEN cDNA 1700123I01 gene	BC138005|1700123I01Rik|622554|RIKEN cDNA 1700123I01 gene	BC145092|1700123I01Rik|622554|RIKEN cDNA 1700123I01 gene
mm9_v1_chr12_-_105711324_105711536	1.95368	FOX{I1,J2}.p2	AB221548|Gsc|14836|goosecoid homeobox	Y13150|Gsc|14836|goosecoid homeobox	NM_010351|Gsc|14836|goosecoid homeobox	Y13149|Gsc|14836|goosecoid homeobox	X99239|Gsc|14836|goosecoid homeobox
mm9_v1_chr2_-_152169650_152169795	1.9501	FOX{I1,J2}.p2	AK146421|Trib3|228775|tribbles homolog 3 (Drosophila)	AK089931|Trib3|228775|tribbles homolog 3 (Drosophila)	AK144752|Trib3|228775|tribbles homolog 3 (Drosophila)	AJ514260|Trib3|228775|tribbles homolog 3 (Drosophila)	AK146340|Trib3|228775|tribbles homolog 3 (Drosophila)	AK132257|Trib3|228775|tribbles homolog 3 (Drosophila)	AK159760|Trib3|228775|tribbles homolog 3 (Drosophila)	AF358868|Trib3|228775|tribbles homolog 3 (Drosophila)	BC012955|Trib3|228775|tribbles homolog 3 (Drosophila)	AK160099|Trib3|228775|tribbles homolog 3 (Drosophila)	NM_175093|Trib3|228775|tribbles homolog 3 (Drosophila)
mm9_v1_chr13_-_108516475_108516490	1.94868	FOX{I1,J2}.p2	AK013620|Zswim6|67263|zinc finger, SWIM domain containing 6	AK019357|Zswim6|67263|zinc finger, SWIM domain containing 6
mm9_v1_chr11_+_101037415_101037470	1.94617	FOX{I1,J2}.p2	AF039833|Cntnap1|53321|contactin associated protein-like 1	NM_016782|Cntnap1|53321|contactin associated protein-like 1
mm9_v1_chr4_+_73888400_73888400	1.94507	FOX{I1,J2}.p2	BC042424|Kdm4c|76804|lysine (K)-specific demethylase 4C	NM_001172095|Kdm4c|76804|lysine (K)-specific demethylase 4C
mm9_v1_chr3_+_82859422_82859482	1.94309	FOX{I1,J2}.p2	AK080068|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK077197|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	NM_016784|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK075993|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK076007|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
mm9_v1_chr10_-_78560301_78560348	1.9424	FOX{I1,J2}.p2	BC082302|2610008E11Rik|72128|RIKEN cDNA 2610008E11 gene	AK148309|2610008E11Rik|72128|RIKEN cDNA 2610008E11 gene	NM_001004362|2610008E11Rik|72128|RIKEN cDNA 2610008E11 gene
mm9_v1_chr9_-_115152895_115153139	1.94093	FOX{I1,J2}.p2	AK213927|Stt3b|68292|STT3, subunit of the oligosaccharyltransferase complex, homolog B (S. cerevisiae)
mm9_v1_chr17_+_21672490_21672637	1.93807	FOX{I1,J2}.p2	AK032299|Zfp52|22710|zinc finger protein 52	NM_144515|Zfp52|22710|zinc finger protein 52	BC021527|Zfp52|22710|zinc finger protein 52
mm9_v1_chr17_+_66460934_66461036	1.93565	FOX{I1,J2}.p2	AK159820|ORF19|68767|open reading frame 19	AK171737|ORF19|68767|open reading frame 19	AK172673|ORF19|68767|open reading frame 19	AJ304796|ORF19|68767|open reading frame 19	AK149967|ORF19|68767|open reading frame 19	BC025839|ORF19|68767|open reading frame 19	NM_001037757|ORF19|68767|open reading frame 19	AK154400|ORF19|68767|open reading frame 19	AK033616|ORF19|68767|open reading frame 19
mm9_v1_chr13_-_101086551_101086570	1.933	FOX{I1,J2}.p2	BC116347|Naip6|17952|NLR family, apoptosis inhibitory protein 6	BC141346|Naip6|17952|NLR family, apoptosis inhibitory protein 6	AF381772|Naip6|17952|NLR family, apoptosis inhibitory protein 6	NM_010871|Naip6|17952|NLR family, apoptosis inhibitory protein 6
mm9_v1_chr5_-_21290971_21291070	1.92931	FOX{I1,J2}.p2	AK013295|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	D63784|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	NM_009584|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	BC021755|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK167991|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK131964|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK161376|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK162409|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK136951|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	BC052027|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK169850|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2
mm9_v1_chr13_-_41165827_41165833	1.92915	FOX{I1,J2}.p2	X66983|Mak|17152|male germ cell-associated kinase	NM_008547|Mak|17152|male germ cell-associated kinase
mm9_v1_chr17_+_10512744_10512791	1.92709	FOX{I1,J2}.p2	AK012373|B930003M22Rik|100526796|RIKEN cDNA B930003M22 gene	AK046926|B930003M22Rik|100526796|RIKEN cDNA B930003M22 gene
mm9_v1_chr10_-_75931858_75931858	1.92703	FOX{I1,J2}.p2	BC057308|Ybey|216119|ybeY metallopeptidase	NM_172550|Ybey|216119|ybeY metallopeptidase
mm9_v1_chrX_-_7182450_7182545	1.92666	FOX{I1,J2}.p2	BC011195|Ccdc22|54638|coiled-coil domain containing 22	AK010536|Ccdc22|54638|coiled-coil domain containing 22	AF229637|Ccdc22|54638|coiled-coil domain containing 22	AK039573|Ccdc22|54638|coiled-coil domain containing 22	NM_138603|Ccdc22|54638|coiled-coil domain containing 22
mm9_v1_chr3_+_95462640_95462703	1.92586	FOX{I1,J2}.p2	NM_008562|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr11_-_43714689_43714740	1.92549	FOX{I1,J2}.p2	BC037002|Adra1b|11548|adrenergic receptor, alpha 1b	AK004891|Adra1b|11548|adrenergic receptor, alpha 1b	BC018330|Adra1b|11548|adrenergic receptor, alpha 1b
mm9_v1_chr5_-_104450856_104450959	1.92396	FOX{I1,J2}.p2	AK049355|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11
mm9_v1_chr5_-_38893331_38893390	1.92005	FOX{I1,J2}.p2	BC138213|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	BC145198|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	BC006076|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9	NM_145559|Slc2a9|117591|solute carrier family 2 (facilitated glucose transporter), member 9
mm9_v1_chr1_+_58852217_58852287	1.91788	FOX{I1,J2}.p2	AK146758|Casp8|12370|caspase 8	AK168812|Casp8|12370|caspase 8	NM_009812|Casp8|12370|caspase 8	BC006737|Casp8|12370|caspase 8
mm9_v1_chr7_-_134160864_134160869	1.91678	FOX{I1,J2}.p2	BC003932|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene	NM_030240|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene
mm9_v1_chr11_-_99877508_99877525	1.91267	FOX{I1,J2}.p2	BC029257|Krt33a|71888|keratin 33A	AK009363|Krt33a|71888|keratin 33A	AK037251|Krt33a|71888|keratin 33A	NM_027983|Krt33a|71888|keratin 33A
mm9_v1_chr15_-_74879242_74879259	1.91182	FOX{I1,J2}.p2	AK088782|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	AK143577|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	BC010764|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1	NM_010741|Ly6c1|17067|lymphocyte antigen 6 complex, locus C1
mm9_v1_chr1_-_192994532_192994569	1.90985	FOX{I1,J2}.p2	AK217100|Atf3|11910|activating transcription factor 3
mm9_v1_chr6_+_29644178_29644255	1.90936	FOX{I1,J2}.p2	AF276890|Tspan33|232670|tetraspanin 33	AK172176|Tspan33|232670|tetraspanin 33	AK004954|Tspan33|232670|tetraspanin 33	BC024685|Tspan33|232670|tetraspanin 33	NM_146173|Tspan33|232670|tetraspanin 33
mm9_v1_chr10_-_30320470_30320554	1.90658	FOX{I1,J2}.p2	BC048703|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	AK014181|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	AK010722|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	AK032943|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	AF532979|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	NM_028604|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)
mm9_v1_chr9_+_88734001_88734001	1.90641	FOX{I1,J2}.p2	NM_001177858|Trim43c|666731|tripartite motif-containing 43C
mm9_v1_chr8_-_55606109_55606134	1.90392	FOX{I1,J2}.p2	AK051731|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)
mm9_v1_chr9_-_43921555_43921605	1.8916	FOX{I1,J2}.p2	BC111036|Rnf26|213211|ring finger protein 26	AK157821|Rnf26|213211|ring finger protein 26	AK085078|Rnf26|213211|ring finger protein 26	AK033164|Rnf26|213211|ring finger protein 26
mm9_v1_chr16_+_33500899_33501016	1.89159	FOX{I1,J2}.p2	AK037342|Zfp148|22661|zinc finger protein 148
mm9_v1_chr3_-_95622554_95622875	1.88055	FOX{I1,J2}.p2	AK129150|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK154692|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	BC067054|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK083674|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK087157|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK012860|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	AK015972|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2	NM_001081293|Rprd2|75137|regulation of nuclear pre-mRNA domain containing 2
mm9_v1_chr3_-_92631151_92631173	1.87968	FOX{I1,J2}.p2	BC141372|Kprp|433619|keratinocyte expressed, proline-rich	NM_028629|Kprp|433619|keratinocyte expressed, proline-rich
mm9_v1_chr4_-_139388882_139388882	1.87168	FOX{I1,J2}.p2	AF254422|Pax7|18509|paired box gene 7	NM_011039|Pax7|18509|paired box gene 7
mm9_v1_chr16_+_17331507_17331521	1.86742	FOX{I1,J2}.p2	BC089610|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr13_-_101386865_101386925	1.86522	FOX{I1,J2}.p2	DQ143929|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	DQ682659|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	DQ682661|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	AK156238|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	NM_178410|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	AK133741|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	NM_001038602|Marveld2|218518|MARVEL (membrane-associating) domain containing 2
mm9_v1_chr17_+_30763879_30763935	1.86403	FOX{I1,J2}.p2	AK161258|Dnahc8|13417|dynein, axonemal, heavy chain 8	AF356520|Dnahc8|13417|dynein, axonemal, heavy chain 8	AF356521|Dnahc8|13417|dynein, axonemal, heavy chain 8	NM_013811|Dnahc8|13417|dynein, axonemal, heavy chain 8	AF356522|Dnahc8|13417|dynein, axonemal, heavy chain 8	AF356523|Dnahc8|13417|dynein, axonemal, heavy chain 8	AF363577|Dnahc8|13417|dynein, axonemal, heavy chain 8
mm9_v1_chr7_-_34926107_34926132	1.86184	FOX{I1,J2}.p2	AK218279|Uba2|50995|ubiquitin-like modifier activating enzyme 2	AK208593|Uba2|50995|ubiquitin-like modifier activating enzyme 2
mm9_v1_chr7_+_129210847_129210947	1.85893	FOX{I1,J2}.p2	AK017851|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr1_-_141677744_141677835	1.85793	FOX{I1,J2}.p2	AJ871401|EG214403|214403|predicted gene, EG214403	AJ871402|EG214403|214403|predicted gene, EG214403	BC141136|EG214403|214403|predicted gene, EG214403	BC145444|EG214403|214403|predicted gene, EG214403	M29009|EG214403|214403|predicted gene, EG214403	NM_001029977|EG214403|214403|predicted gene, EG214403	NM_001160303|EG214403|214403|predicted gene, EG214403	NM_001160304|EG214403|214403|predicted gene, EG214403
mm9_v1_chr19_-_46747355_46747384	1.85645	FOX{I1,J2}.p2	M64863|Cyp17a1|13074|cytochrome P450, family 17, subfamily a, polypeptide 1	AK132830|Cyp17a1|13074|cytochrome P450, family 17, subfamily a, polypeptide 1	AK134376|Cyp17a1|13074|cytochrome P450, family 17, subfamily a, polypeptide 1
mm9_v1_chr3_+_82859489_82859512	1.85592	FOX{I1,J2}.p2	BC006750|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	BC052895|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
mm9_v1_chr16_+_36184297_36184316	1.85261	FOX{I1,J2}.p2	AK089257|Gm5483|433016|predicted gene 5483	NM_001082547|Gm5483|433016|predicted gene 5483	BC147081|Gm5483|433016|predicted gene 5483	BC147082|Gm5483|433016|predicted gene 5483
mm9_v1_chr19_-_27463677_27463827	1.85251	FOX{I1,J2}.p2	AK004416|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed
mm9_v1_chr2_-_121206675_121206675	1.85023	FOX{I1,J2}.p2	AF375593|Strc|140476|stereocilin	NM_080459|Strc|140476|stereocilin
mm9_v1_chr6_-_130336891_130336991	1.84918	FOX{I1,J2}.p2	AY078436|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	NM_016659|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF419250|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1	AF444273|Klra1|16627|killer cell lectin-like receptor, subfamily A, member 1
mm9_v1_chr17_+_66472859_66472952	1.84883	FOX{I1,J2}.p2	BC079656|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	NM_001003919|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	AK076357|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	AK049419|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)	AK152868|Ddx11|320209|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)
mm9_v1_chr19_-_4175478_4175577	1.84529	FOX{I1,J2}.p2	NM_134148|Carns1|107239|carnosine synthase 1
mm9_v1_chrX_-_17149313_17149460	1.83943	FOX{I1,J2}.p2	BC012515|Fundc1|72018|FUN14 domain containing 1	AK168868|Fundc1|72018|FUN14 domain containing 1	BC030487|Fundc1|72018|FUN14 domain containing 1	AK005163|Fundc1|72018|FUN14 domain containing 1	NM_028058|Fundc1|72018|FUN14 domain containing 1
mm9_v1_chr10_+_57786213_57786415	1.83585	FOX{I1,J2}.p2	AK014954|Lims1|110829|LIM and senescent cell antigen-like domains 1	NM_026148|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK088939|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK153346|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK151235|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK151938|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK152679|Lims1|110829|LIM and senescent cell antigen-like domains 1	AK082932|Lims1|110829|LIM and senescent cell antigen-like domains 1	BC005621|Lims1|110829|LIM and senescent cell antigen-like domains 1	BC067393|Lims1|110829|LIM and senescent cell antigen-like domains 1
mm9_v1_chr14_+_62217061_62217076	1.83505	FOX{I1,J2}.p2	AF220129|Trim13|66597|tripartite motif-containing 13	NM_001164220|Trim13|66597|tripartite motif-containing 13	AK162129|Trim13|66597|tripartite motif-containing 13
mm9_v1_chr14_+_41964744_41964800	1.83279	FOX{I1,J2}.p2	NM_010775|Mbl1|17194|mannose-binding lectin (protein A) 1	S42292|Mbl1|17194|mannose-binding lectin (protein A) 1	AK034788|Mbl1|17194|mannose-binding lectin (protein A) 1	BC012245|Mbl1|17194|mannose-binding lectin (protein A) 1	BC021762|Mbl1|17194|mannose-binding lectin (protein A) 1	D11441|Mbl1|17194|mannose-binding lectin (protein A) 1
mm9_v1_chr15_-_5058532_5058532	1.83179	FOX{I1,J2}.p2	NM_001163138|Card6|239319|caspase recruitment domain family, member 6
mm9_v1_chr1_+_173489323_173489455	1.82792	FOX{I1,J2}.p2	AK089530|Cd244|18106|CD244 natural killer cell receptor 2B4	AK171544|Cd244|18106|CD244 natural killer cell receptor 2B4	NM_018729|Cd244|18106|CD244 natural killer cell receptor 2B4	AK170167|Cd244|18106|CD244 natural killer cell receptor 2B4	AF082803|Cd244|18106|CD244 natural killer cell receptor 2B4	L19057|Cd244|18106|CD244 natural killer cell receptor 2B4	AF184208|Cd244|18106|CD244 natural killer cell receptor 2B4	AF234830|Cd244|18106|CD244 natural killer cell receptor 2B4	AK137505|Cd244|18106|CD244 natural killer cell receptor 2B4	AK155548|Cd244|18106|CD244 natural killer cell receptor 2B4	AF234831|Cd244|18106|CD244 natural killer cell receptor 2B4	BC145067|Cd244|18106|CD244 natural killer cell receptor 2B4	BC150692|LOC677008|677008|natural killer cell receptor 2B4-like	AB196800|Cd244|18106|CD244 natural killer cell receptor 2B4	AB196801|Cd244|18106|CD244 natural killer cell receptor 2B4	AB196802|Cd244|18106|CD244 natural killer cell receptor 2B4	AB196803|Cd244|18106|CD244 natural killer cell receptor 2B4
mm9_v1_chr1_-_66909822_66909954	1.82791	FOX{I1,J2}.p2	U21489|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	BC027412|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	AK005140|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	NM_007381|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	AK151845|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain	AK167537|Acadl|11363|acyl-Coenzyme A dehydrogenase, long-chain
mm9_v1_chr2_-_75819804_75820023	1.81795	FOX{I1,J2}.p2	BC004773|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK045096|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK029535|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	AK019670|Ttc30a1|78802|tetratricopeptide repeat domain 30A1	NM_030188|Ttc30a1|78802|tetratricopeptide repeat domain 30A1
mm9_v1_chr2_+_71291369_71291427	1.81731	FOX{I1,J2}.p2	AK010067|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	NM_025633|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	AK005241|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	BC060739|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)
mm9_v1_chr10_+_126602394_126602451	1.81697	FOX{I1,J2}.p2	BC022180|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm9_v1_chr9_+_107483603_107483637	1.81677	FOX{I1,J2}.p2	BC018457|Hyal3|109685|hyaluronoglucosaminidase 3	NM_178020|Hyal3|109685|hyaluronoglucosaminidase 3	AY048681|Hyal3|109685|hyaluronoglucosaminidase 3
mm9_v1_chr16_+_20128178_20128320	1.81237	FOX{I1,J2}.p2	AK004187|Klhl24|75785|kelch-like 24 (Drosophila)
mm9_v1_chr6_+_70165393_70165411	1.80706	FOX{I1,J2}.p2	X05877|LOC672450|672450|V(kappa) gene product	V00810|Igk-V28|16114|immunoglobulin kappa chain variable 28 (V28)	BC091754|Igkv6-23|637227|immunoglobulin kappa variable 6-23
mm9_v1_chr1_-_164914621_164914660	1.80283	FOX{I1,J2}.p2	NM_008030|Fmo3|14262|flavin containing monooxygenase 3	U87147|Fmo3|14262|flavin containing monooxygenase 3	AK149440|Fmo3|14262|flavin containing monooxygenase 3	AK050123|Fmo3|14262|flavin containing monooxygenase 3
mm9_v1_chr11_-_99949426_99949428	1.79931	FOX{I1,J2}.p2	BC118064|Krt32|16670|keratin 32	BC117553|Krt32|16670|keratin 32	NM_001159374|Krt32|16670|keratin 32	X75649|Krt32|16670|keratin 32
mm9_v1_chr5_-_138596915_138596971	1.79611	FOX{I1,J2}.p2	BC052453|Zfp113|56314|zinc finger protein 113	BC054525|Zfp113|56314|zinc finger protein 113	BC056991|Zfp113|56314|zinc finger protein 113	AF167320|Zfp113|56314|zinc finger protein 113	AK076349|Zfp113|56314|zinc finger protein 113	AK220556|Zfp113|56314|zinc finger protein 113	NM_019747|Zfp113|56314|zinc finger protein 113
mm9_v1_chr7_-_25084361_25084383	1.79271	FOX{I1,J2}.p2	AK149960|Zfp61|22719|zinc finger protein 61	AK148158|Zfp61|22719|zinc finger protein 61
mm9_v1_chr19_+_8815893_8816001	1.79008	FOX{I1,J2}.p2	NM_001167799|Stx5a|56389|syntaxin 5A	AK002722|Stx5a|56389|syntaxin 5A	BC004849|Stx5a|56389|syntaxin 5A
mm9_v1_chr3_-_108707417_108707441	1.78878	FOX{I1,J2}.p2	AK007374|Prpf38b|66921|PRP38 pre-mRNA processing factor 38 (yeast) domain containing B
mm9_v1_chr9_+_65738150_65738159	1.78518	FOX{I1,J2}.p2	AK012140|2810417H13Rik|68026|RIKEN cDNA 2810417H13 gene
mm9_v1_chr17_+_37138107_37138107	1.78314	FOX{I1,J2}.p2	AK139625|Zfp57|22715|zinc finger protein 57	NM_001168502|Zfp57|22715|zinc finger protein 57
mm9_v1_chr1_+_19202046_19202134	1.78213	FOX{I1,J2}.p2	AK032045|Tcfap2b|21419|transcription factor AP-2 beta	NM_001025305|Tcfap2b|21419|transcription factor AP-2 beta
mm9_v1_chr2_-_14976498_14976510	1.7795	FOX{I1,J2}.p2	AK016629|Nsun6|74455|NOL1/NOP2/Sun domain family member 6	NM_001165941|Nsun6|74455|NOL1/NOP2/Sun domain family member 6	NM_001165943|Nsun6|74455|NOL1/NOP2/Sun domain family member 6	AK016811|Nsun6|74455|NOL1/NOP2/Sun domain family member 6
mm9_v1_chr1_-_64167952_64168022	1.77902	FOX{I1,J2}.p2	BC019604|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	NM_033563|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC004700|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC040794|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AF338369|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AK149362|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr5_+_142877419_142877473	1.77899	FOX{I1,J2}.p2	NM_199068|Foxk1|17425|forkhead box K1	AK147375|Foxk1|17425|forkhead box K1	L26507|Foxk1|17425|forkhead box K1	U95016|Foxk1|17425|forkhead box K1	BC060238|Foxk1|17425|forkhead box K1
mm9_v1_chr1_+_174628164_174628196	1.77885	FOX{I1,J2}.p2	AK050392|Crp|12944|C-reactive protein, pentraxin-related	NM_007768|Crp|12944|C-reactive protein, pentraxin-related	X17496|Crp|12944|C-reactive protein, pentraxin-related	AK088477|Crp|12944|C-reactive protein, pentraxin-related	BC011124|Crp|12944|C-reactive protein, pentraxin-related
mm9_v1_chr17_+_8503966_8504073	1.7774	FOX{I1,J2}.p2	BC091770|Sft2d1|106489|SFT2 domain containing 1	NM_134114|Sft2d1|106489|SFT2 domain containing 1	BC006777|Sft2d1|106489|SFT2 domain containing 1	AK171776|Sft2d1|106489|SFT2 domain containing 1	AK151338|Sft2d1|106489|SFT2 domain containing 1	BC130232|Sft2d1|106489|SFT2 domain containing 1	AK017471|Sft2d1|106489|SFT2 domain containing 1
mm9_v1_chr13_-_113370869_113370869	1.77537	FOX{I1,J2}.p2	AB083111|Il31ra|218624|interleukin 31 receptor A	NM_139299|Il31ra|218624|interleukin 31 receptor A
mm9_v1_chr6_-_40949477_40949477	1.77074	FOX{I1,J2}.p2	NM_001102660|Gm2663|100040208|predicted gene 2663
mm9_v1_chr18_-_42110847_42110895	1.77058	FOX{I1,J2}.p2	BC119251|Prelid2|77619|PRELI domain containing 2	BC120711|Prelid2|77619|PRELI domain containing 2	BC145035|Prelid2|77619|PRELI domain containing 2	NM_029942|Prelid2|77619|PRELI domain containing 2	AK021193|Prelid2|77619|PRELI domain containing 2
mm9_v1_chr7_+_148586221_148586268	1.77016	FOX{I1,J2}.p2	U63159|Taldo1|21351|transaldolase 1
mm9_v1_chr4_+_6292817_6292904	1.76779	FOX{I1,J2}.p2	AK169415|Sdcbp|53378|syndecan binding protein	NM_001098227|Sdcbp|53378|syndecan binding protein	NM_016807|Sdcbp|53378|syndecan binding protein	AK033412|Sdcbp|53378|syndecan binding protein	AF003693|Sdcbp|53378|syndecan binding protein	AK150721|Sdcbp|53378|syndecan binding protein	AK152080|Sdcbp|53378|syndecan binding protein	AK159677|Sdcbp|53378|syndecan binding protein	AK150623|Sdcbp|53378|syndecan binding protein	AK152552|Sdcbp|53378|syndecan binding protein	AK153112|Sdcbp|53378|syndecan binding protein	AK169219|Sdcbp|53378|syndecan binding protein	AK045668|Sdcbp|53378|syndecan binding protein	AK168004|Sdcbp|53378|syndecan binding protein	AK028429|Sdcbp|53378|syndecan binding protein	AK146085|Sdcbp|53378|syndecan binding protein	AK150544|Sdcbp|53378|syndecan binding protein	AK150996|Sdcbp|53378|syndecan binding protein	AK151050|Sdcbp|53378|syndecan binding protein	AK152017|Sdcbp|53378|syndecan binding protein	AK152434|Sdcbp|53378|syndecan binding protein	AK153042|Sdcbp|53378|syndecan binding protein	AK159538|Sdcbp|53378|syndecan binding protein	AK169687|Sdcbp|53378|syndecan binding protein	AK171162|Sdcbp|53378|syndecan binding protein	AK150707|Sdcbp|53378|syndecan binding protein	AK152001|Sdcbp|53378|syndecan binding protein	AK152577|Sdcbp|53378|syndecan binding protein	AK152855|Sdcbp|53378|syndecan binding protein	AK152109|Sdcbp|53378|syndecan binding protein	AK150801|Sdcbp|53378|syndecan binding protein	AK014678|Sdcbp|53378|syndecan binding protein	AK150321|Sdcbp|53378|syndecan binding protein	AK150661|Sdcbp|53378|syndecan binding protein	AK150736|Sdcbp|53378|syndecan binding protein	AK159124|Sdcbp|53378|syndecan binding protein	AK165657|Sdcbp|53378|syndecan binding protein	AK167513|Sdcbp|53378|syndecan binding protein	AK168777|Sdcbp|53378|syndecan binding protein	BC019400|Sdcbp|53378|syndecan binding protein	AK150278|Sdcbp|53378|syndecan binding protein	AF077527|Sdcbp|53378|syndecan binding protein	AK159323|Sdcbp|53378|syndecan binding protein
mm9_v1_chr6_+_122407245_122407359	1.76686	FOX{I1,J2}.p2	AK159742|Rps27a|78294|ribosomal protein S27A
mm9_v1_chr10_-_43621485_43621487	1.76537	FOX{I1,J2}.p2	AK170225|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
mm9_v1_chr11_-_97627829_97627926	1.76408	FOX{I1,J2}.p2	BC021478|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	BC079553|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK030628|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK035158|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK004983|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	AK017849|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)	NM_026186|Cwc25|67480|CWC25 spliceosome-associated protein homolog (S. cerevisiae)
mm9_v1_chr8_-_63433528_63433596	1.76291	FOX{I1,J2}.p2	BC057133|Clcn3|12725|chloride channel 3	NM_173876|Clcn3|12725|chloride channel 3
mm9_v1_chr9_-_82869081_82869124	1.76211	FOX{I1,J2}.p2	NM_001081216|Phip|83946|pleckstrin homology domain interacting protein	AK032797|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr6_+_117857771_117857856	1.75976	FOX{I1,J2}.p2	NM_001166428|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F	NM_001166429|Hnrnpf|98758|heterogeneous nuclear ribonucleoprotein F
mm9_v1_chr13_+_55828701_55828778	1.75973	FOX{I1,J2}.p2	NM_028281|Pcbd2|72562|pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2	AK012465|Pcbd2|72562|pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2	BC028642|Pcbd2|72562|pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2
mm9_v1_chr15_-_81238649_81238728	1.75411	FOX{I1,J2}.p2	BC104396|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	BC104397|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	BC119478|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	BC048738|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	AB028855|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	NM_021317|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	AK006201|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7	AK077186|Dnajb7|57755|DnaJ (Hsp40) homolog, subfamily B, member 7
mm9_v1_chr4_-_143998305_143998366	1.75385	FOX{I1,J2}.p2	AK167683|Pramef12|77632|PRAME family member 12	BC066168|Pramef12|77632|PRAME family member 12	AK019795|Pramef12|77632|PRAME family member 12	NM_029948|Pramef12|77632|PRAME family member 12
mm9_v1_chr2_-_32639934_32639947	1.74943	FOX{I1,J2}.p2	AK006127|1700019L03Rik|227736|RIKEN cDNA 1700019L03 gene
mm9_v1_chr11_-_115794319_115794319	1.74833	FOX{I1,J2}.p2	AB059999|Recql5|170472|RecQ protein-like 5	NM_130454|Recql5|170472|RecQ protein-like 5
mm9_v1_chr3_-_37024751_37024880	1.74695	FOX{I1,J2}.p2	U41504|Il2|16183|interleukin 2	DQ836354|Il2|16183|interleukin 2	U41494|Il2|16183|interleukin 2	U41505|Il2|16183|interleukin 2	U41506|Il2|16183|interleukin 2	AY147902|Il2|16183|interleukin 2	X66058|Il2|16183|interleukin 2	AF065914|Il2|16183|interleukin 2	AF065915|Il2|16183|interleukin 2	AF065916|Il2|16183|interleukin 2	BC116845|Il2|16183|interleukin 2	BC116873|Il2|16183|interleukin 2	X01772|Il2|16183|interleukin 2	X73040|Il2|16183|interleukin 2	K02292|Il2|16183|interleukin 2	NM_008366|Il2|16183|interleukin 2	AF538059|Il2|16183|interleukin 2	AF542383|Il2|16183|interleukin 2	AF542384|Il2|16183|interleukin 2	AF542385|Il2|16183|interleukin 2
mm9_v1_chr17_-_43013320_43013409	1.74545	FOX{I1,J2}.p2	BC138374|Cd2ap|12488|CD2-associated protein	BC157901|Cd2ap|12488|CD2-associated protein	AK045218|Cd2ap|12488|CD2-associated protein	NM_009847|Cd2ap|12488|CD2-associated protein
mm9_v1_chr6_-_115684968_115684968	1.745	FOX{I1,J2}.p2	AK078864|Tmem40|94346|transmembrane protein 40	NM_001168259|Tmem40|94346|transmembrane protein 40
mm9_v1_chr13_-_13097596_13097637	1.74277	FOX{I1,J2}.p2	K02245|Prl2c2|18811|prolactin family 2, subfamily c, member 2	NM_031191|Prl2c2|18811|prolactin family 2, subfamily c, member 2	X75557|Prl2c2|18811|prolactin family 2, subfamily c, member 2	BC145439|Prl2c2|18811|prolactin family 2, subfamily c, member 2	BC100300|Prl2c2|18811|prolactin family 2, subfamily c, member 2	BC056203|Prl2c2|18811|prolactin family 2, subfamily c, member 2
mm9_v1_chr15_-_72929166_72929248	1.74074	FOX{I1,J2}.p2	AK148725|2310051F07Rik|108745|RIKEN cDNA 2310051F07 gene
mm9_v1_chr10_-_80806010_80806010	1.73826	FOX{I1,J2}.p2	AB074494|Gipc3|209047|GIPC PDZ domain containing family, member 3	NM_148951|Gipc3|209047|GIPC PDZ domain containing family, member 3
mm9_v1_chr10_+_57365674_57365674	1.7378	FOX{I1,J2}.p2	BC061162|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific	NM_001039052|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific	NM_001039053|Pkib|18768|protein kinase inhibitor beta, cAMP dependent, testis specific
mm9_v1_chr3_-_59014800_59014805	1.73696	FOX{I1,J2}.p2	BC119043|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13	AK008013|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13	AK038560|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13	AK083264|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13	NM_028808|P2ry13|74191|purinergic receptor P2Y, G-protein coupled 13
mm9_v1_chr1_-_140744146_140744155	1.73669	FOX{I1,J2}.p2	AF134761|Lhx9|16876|LIM homeobox protein 9	AJ243851|Lhx9|16876|LIM homeobox protein 9	NM_010714|Lhx9|16876|LIM homeobox protein 9
mm9_v1_chr5_-_100392845_100392900	1.73341	FOX{I1,J2}.p2	AK053251|Hnrnpd|11991|heterogeneous nuclear ribonucleoprotein D
mm9_v1_chr7_-_15078274_15078316	1.73134	FOX{I1,J2}.p2	NM_001184981|Sult2a7|638251|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 7
mm9_v1_chr2_+_180195682_180195733	1.73024	FOX{I1,J2}.p2	BC030719|Slco4a1|108115|solute carrier organic anion transporter family, member 4a1	NM_148933|Slco4a1|108115|solute carrier organic anion transporter family, member 4a1	BC030720|Slco4a1|108115|solute carrier organic anion transporter family, member 4a1
mm9_v1_chr6_-_48720814_48720859	1.7301	FOX{I1,J2}.p2	BC028427|Gimap3|83408|GTPase, IMAP family member 3	BC062246|Gimap3|83408|GTPase, IMAP family member 3	BC094914|Gimap3|83408|GTPase, IMAP family member 3	BC037362|Gimap3|83408|GTPase, IMAP family member 3	AB164418|Gimap3|83408|GTPase, IMAP family member 3	AF337052|Gimap3|83408|GTPase, IMAP family member 3	NM_031247|Gimap3|83408|GTPase, IMAP family member 3
mm9_v1_chr6_+_108015037_108015048	1.72822	FOX{I1,J2}.p2	AK017895|Setmar|74729|SET domain and mariner transposase fusion gene	NM_178391|Setmar|74729|SET domain and mariner transposase fusion gene	BC045208|Setmar|74729|SET domain and mariner transposase fusion gene
mm9_v1_chr17_+_19499098_19499098	1.7264	FOX{I1,J2}.p2	NM_001104551|Vmn2r99|665376|vomeronasal 2, receptor 99
mm9_v1_chr8_-_120195414_120195414	1.7241	FOX{I1,J2}.p2	AK014586|Sdr42e1|74032|short chain dehydrogenase/reductase family 42E, member 1	NM_028725|Sdr42e1|74032|short chain dehydrogenase/reductase family 42E, member 1
mm9_v1_chr7_+_88716050_88716233	1.72264	FOX{I1,J2}.p2	AK162084|Whamm|434204|WAS protein homolog associated with actin, golgi membranes and microtubules	AK080911|Whamm|434204|WAS protein homolog associated with actin, golgi membranes and microtubules	AK140311|Whamm|434204|WAS protein homolog associated with actin, golgi membranes and microtubules	BC042749|Whamm|434204|WAS protein homolog associated with actin, golgi membranes and microtubules	AK220273|Whamm|434204|WAS protein homolog associated with actin, golgi membranes and microtubules	NM_001004185|Whamm|434204|WAS protein homolog associated with actin, golgi membranes and microtubules
mm9_v1_chr7_-_34981664_34981695	1.72132	FOX{I1,J2}.p2	BC115797|Pdcd2l|68079|programmed cell death 2-like	AK077948|Pdcd2l|68079|programmed cell death 2-like	NM_026549|Pdcd2l|68079|programmed cell death 2-like	AK151495|Pdcd2l|68079|programmed cell death 2-like	AK003339|Pdcd2l|68079|programmed cell death 2-like	AK154811|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chr6_-_143048580_143048646	1.72094	FOX{I1,J2}.p2	AK029825|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	AK021056|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	BC027763|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	AK143732|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	NM_001109688|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	NM_029081|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	NM_029897|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene
mm9_v1_chr9_+_55388955_55389013	1.71999	FOX{I1,J2}.p2	NM_027397|Isl2|104360|insulin related protein 2 (islet 2)	AK013964|Isl2|104360|insulin related protein 2 (islet 2)	BC120880|Isl2|104360|insulin related protein 2 (islet 2)	BC148307|Isl2|104360|insulin related protein 2 (islet 2)
mm9_v1_chr11_-_105318037_105318048	1.71575	FOX{I1,J2}.p2	AK132734|March10|632687|membrane-associated ring finger (C3HC4) 10	BC100474|March10|632687|membrane-associated ring finger (C3HC4) 10	NM_001039242|March10|632687|membrane-associated ring finger (C3HC4) 10	NM_172568|March10|632687|membrane-associated ring finger (C3HC4) 10
mm9_v1_chr18_-_65553541_65553541	1.71049	FOX{I1,J2}.p2	NM_001037294|Alpk2|225638|alpha-kinase 2
mm9_v1_chr11_-_17853850_17853896	1.71025	FOX{I1,J2}.p2	BC028916|Etaa1|68145|Ewing's tumor-associated antigen 1	AK034138|Etaa1|68145|Ewing's tumor-associated antigen 1	AK019965|Etaa1|68145|Ewing's tumor-associated antigen 1	NM_026576|Etaa1|68145|Ewing's tumor-associated antigen 1
mm9_v1_chr7_+_89003886_89004046	1.70977	FOX{I1,J2}.p2	AK083132|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK135100|Tm6sf1|107769|transmembrane 6 superfamily member 1	NM_145375|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK163621|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK172109|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK046714|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK172145|Tm6sf1|107769|transmembrane 6 superfamily member 1	BC023123|Tm6sf1|107769|transmembrane 6 superfamily member 1	AK162572|Tm6sf1|107769|transmembrane 6 superfamily member 1
mm9_v1_chr3_-_30498769_30498835	1.70701	FOX{I1,J2}.p2	AK007208|Arpm1|76652|actin related protein M1	AK047260|Arpm1|76652|actin related protein M1	NM_029690|Arpm1|76652|actin related protein M1	BC107277|Arpm1|76652|actin related protein M1	BC107278|Arpm1|76652|actin related protein M1
mm9_v1_chrX_+_45976650_45976756	1.70628	FOX{I1,J2}.p2	AF076981|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF535150|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF535151|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	NM_011398|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr15_+_57743727_57743856	1.70405	FOX{I1,J2}.p2	NM_001081396|Wdr67|210544|WD repeat domain 67	NM_001167679|Wdr67|210544|WD repeat domain 67	AB185844|Wdr67|210544|WD repeat domain 67	AK154264|Wdr67|210544|WD repeat domain 67	AK171024|Wdr67|210544|WD repeat domain 67	BC050039|Wdr67|210544|WD repeat domain 67	BC066830|Wdr67|210544|WD repeat domain 67
mm9_v1_chr5_-_17394776_17394776	1.70216	FOX{I1,J2}.p2	NM_001159558|Cd36|12491|CD36 antigen
mm9_v1_chr9_+_65738129_65738143	1.70007	FOX{I1,J2}.p2	AK011090|2810417H13Rik|68026|RIKEN cDNA 2810417H13 gene	NM_026515|2810417H13Rik|68026|RIKEN cDNA 2810417H13 gene
mm9_v1_chr4_+_11486066_11486118	1.69681	FOX{I1,J2}.p2	AK078439|Rad54b|623474|RAD54 homolog B (S. cerevisiae)	BC057604|Rad54b|623474|RAD54 homolog B (S. cerevisiae)	NM_001039556|Rad54b|623474|RAD54 homolog B (S. cerevisiae)
mm9_v1_chr9_-_70269326_70269397	1.6963	FOX{I1,J2}.p2	AK013312|Ccnb2|12442|cyclin B2	X66032|Ccnb2|12442|cyclin B2	AK076122|Ccnb2|12442|cyclin B2	NM_007630|Ccnb2|12442|cyclin B2
mm9_v1_chr6_+_90288207_90288212	1.69627	FOX{I1,J2}.p2	BC033269|Uroc1|243537|urocanase domain containing 1
mm9_v1_chr12_+_60230704_60230799	1.69105	FOX{I1,J2}.p2	NM_001165254|Ctage5|217615|CTAGE family, member 5	NM_146034|Ctage5|217615|CTAGE family, member 5	AK029466|Ctage5|217615|CTAGE family, member 5	AK080312|Ctage5|217615|CTAGE family, member 5	BC026864|Ctage5|217615|CTAGE family, member 5	AK087188|Ctage5|217615|CTAGE family, member 5	AK053010|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr16_+_35770488_35770517	1.68661	FOX{I1,J2}.p2	AK028824|Hspbap1|66667|Hspb associated protein 1	AK138906|Hspbap1|66667|Hspb associated protein 1	AK049404|Hspbap1|66667|Hspb associated protein 1	AK076189|Hspbap1|66667|Hspb associated protein 1	AK017731|Hspbap1|66667|Hspb associated protein 1
mm9_v1_chr17_+_7183208_7183431	1.68644	FOX{I1,J2}.p2	NM_026611|Rnaset2b|68195|ribonuclease T2B	AK015947|Rnaset2a|100037283|ribonuclease T2A	AK018722|Rnaset2a|100037283|ribonuclease T2A	AK084454|Rnaset2b|68195|ribonuclease T2B	AK029149|Rnaset2b|68195|ribonuclease T2B	AK019234|Rnaset2a|100037283|ribonuclease T2A	BC031496|Rnaset2a|100037283|ribonuclease T2A	BC100330|Rnaset2b|68195|ribonuclease T2B
mm9_v1_chr6_+_113187821_113187914	1.68628	FOX{I1,J2}.p2	NM_026849|Mtmr14|97287|myotubularin related protein 14	AK161445|Mtmr14|97287|myotubularin related protein 14	BC018294|Mtmr14|97287|myotubularin related protein 14	AK034867|Mtmr14|97287|myotubularin related protein 14
mm9_v1_chr2_-_32639915_32639924	1.68361	FOX{I1,J2}.p2	BC118617|1700019L03Rik|227736|RIKEN cDNA 1700019L03 gene	BC121825|1700019L03Rik|227736|RIKEN cDNA 1700019L03 gene	NM_025619|1700019L03Rik|227736|RIKEN cDNA 1700019L03 gene
mm9_v1_chr17_-_24300592_24300754	1.68245	FOX{I1,J2}.p2	AK168432|Amdhd2|245847|amidohydrolase domain containing 2	AK078259|Amdhd2|245847|amidohydrolase domain containing 2	AK077584|Amdhd2|245847|amidohydrolase domain containing 2	AK159860|Amdhd2|245847|amidohydrolase domain containing 2	AK090009|Amdhd2|245847|amidohydrolase domain containing 2	AK154209|Amdhd2|245847|amidohydrolase domain containing 2	NM_172935|Amdhd2|245847|amidohydrolase domain containing 2
mm9_v1_chr1_-_39608739_39608803	1.68214	FOX{I1,J2}.p2	AK020327|Rnf149|67702|ring finger protein 149
mm9_v1_chr10_+_127669154_127669189	1.68203	FOX{I1,J2}.p2	BC058641|Timeless|21853|timeless homolog (Drosophila)	BC082770|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr10_-_52058305_52058381	1.68175	FOX{I1,J2}.p2	AK008806|Gopc|94221|golgi associated PDZ and coiled-coil motif containing
mm9_v1_chr5_-_31490075_31490203	1.67477	FOX{I1,J2}.p2	
mm9_v1_chr2_+_30271579_30271778	1.67242	FOX{I1,J2}.p2	AK049184|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	BC006626|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	BC052852|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK160980|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AY035997|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	AK046288|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr2_-_32630929_32631152	1.66566	FOX{I1,J2}.p2	AK133273|Ttc16|338348|tetratricopeptide repeat domain 16	AK164721|Ttc16|338348|tetratricopeptide repeat domain 16	AK089384|Ttc16|338348|tetratricopeptide repeat domain 16
mm9_v1_chr11_+_49064088_49064104	1.66341	FOX{I1,J2}.p2	AK087959|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	BC006629|Mgat1|17308|mannoside acetylglucosaminyltransferase 1
mm9_v1_chr6_+_57530968_57531087	1.66216	FOX{I1,J2}.p2	NM_025992|Herc6|67138|hect domain and RLD 6	AK149648|Herc6|67138|hect domain and RLD 6	AK147960|Herc6|67138|hect domain and RLD 6	AK011047|Herc6|67138|hect domain and RLD 6
mm9_v1_chr6_-_16848314_16848325	1.66076	FOX{I1,J2}.p2	BC098494|Tcfec|21426|transcription factor EC
mm9_v1_chr9_+_123429291_123429490	1.65576	FOX{I1,J2}.p2	AK180316|Limd1|29806|LIM domains containing 1	AK212225|Limd1|29806|LIM domains containing 1	AK215267|Limd1|29806|LIM domains containing 1	AK215631|Limd1|29806|LIM domains containing 1	AK216846|Limd1|29806|LIM domains containing 1	AK220081|Limd1|29806|LIM domains containing 1	AK210611|Limd1|29806|LIM domains containing 1
mm9_v1_chr9_+_108239210_108239322	1.65364	FOX{I1,J2}.p2	AK177758|Rhoa|11848|ras homolog gene family, member A
mm9_v1_chr1_-_39608846_39608882	1.65203	FOX{I1,J2}.p2	AK040602|Rnf149|67702|ring finger protein 149
mm9_v1_chr1_+_169298077_169298107	1.6507	FOX{I1,J2}.p2	AK208220|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1
mm9_v1_chr2_-_25483295_25483445	1.65064	FOX{I1,J2}.p2	AB222271|Fcna|14133|ficolin A	CT010383|Fcna|14133|ficolin A	AB007813|Fcna|14133|ficolin A	BC019180|Fcna|14133|ficolin A	AK138752|Fcna|14133|ficolin A
mm9_v1_chr3_-_40706422_40706464	1.65038	FOX{I1,J2}.p2	AK077003|1700034I23Rik|73297|RIKEN cDNA 1700034I23 gene	BC117739|1700034I23Rik|73297|RIKEN cDNA 1700034I23 gene	AK006596|1700034I23Rik|73297|RIKEN cDNA 1700034I23 gene	NM_028494|1700034I23Rik|73297|RIKEN cDNA 1700034I23 gene
mm9_v1_chr19_-_17447333_17447333	1.64829	FOX{I1,J2}.p2	D87332|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2	NM_010265|Gcnt1|14537|glucosaminyl (N-acetyl) transferase 1, core 2
mm9_v1_chr6_+_128942978_128943066	1.64608	FOX{I1,J2}.p2	BC051485|BC064078|408064|cDNA sequence BC064078	BC016205|BC064078|408064|cDNA sequence BC064078	BC017132|BC064078|408064|cDNA sequence BC064078	BC025095|BC064078|408064|cDNA sequence BC064078	BC038635|BC064078|408064|cDNA sequence BC064078	BC096405|BC064078|408064|cDNA sequence BC064078	BC064078|BC064078|408064|cDNA sequence BC064078	AK134020|BC064078|408064|cDNA sequence BC064078
mm9_v1_chr5_-_140302780_140302843	1.64511	FOX{I1,J2}.p2	AK012616|Psmg3|66506|proteasome (prosome, macropain) assembly chaperone 3	BC058692|Psmg3|66506|proteasome (prosome, macropain) assembly chaperone 3	BC027410|Psmg3|66506|proteasome (prosome, macropain) assembly chaperone 3	NM_025604|Psmg3|66506|proteasome (prosome, macropain) assembly chaperone 3	AK019558|Psmg3|66506|proteasome (prosome, macropain) assembly chaperone 3
mm9_v1_chr10_+_127528632_127528696	1.64375	FOX{I1,J2}.p2	AK140355|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	AK155523|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	AK035400|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A	BC020083|Baz2a|116848|bromodomain adjacent to zinc finger domain, 2A
mm9_v1_chr6_+_142563114_142563114	1.6428	FOX{I1,J2}.p2	AK019938|5330439B14Rik|321015|RIKEN cDNA 5330439B14 gene	NM_177314|5330439B14Rik|321015|RIKEN cDNA 5330439B14 gene
mm9_v1_chr2_+_181227910_181227914	1.64073	FOX{I1,J2}.p2	AK028091|Abhd16b|241850|abhydrolase domain containing 16B	NM_183181|Abhd16b|241850|abhydrolase domain containing 16B	BC050777|Abhd16b|241850|abhydrolase domain containing 16B
mm9_v1_chr1_-_137001804_137001852	1.63815	FOX{I1,J2}.p2	BC141210|Lgr6|329252|leucine-rich repeat-containing G protein-coupled receptor 6	AK085901|Lgr6|329252|leucine-rich repeat-containing G protein-coupled receptor 6	AK137380|Lgr6|329252|leucine-rich repeat-containing G protein-coupled receptor 6	NM_001033409|Lgr6|329252|leucine-rich repeat-containing G protein-coupled receptor 6
mm9_v1_chr16_-_79091336_79091341	1.63696	FOX{I1,J2}.p2	NM_008941|Tmprss15|19146|transmembrane protease, serine 15	U73378|Tmprss15|19146|transmembrane protease, serine 15	BC117917|Tmprss15|19146|transmembrane protease, serine 15	BC117918|Tmprss15|19146|transmembrane protease, serine 15	AK033582|Tmprss15|19146|transmembrane protease, serine 15	NM_178855|Tmprss15|19146|transmembrane protease, serine 15
mm9_v1_chr2_-_7002344_7002370	1.63659	FOX{I1,J2}.p2	NM_001110229|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110230|Celf2|14007|CUGBP, Elav-like family member 2	NM_001160292|Celf2|14007|CUGBP, Elav-like family member 2	AK159996|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr11_-_97643692_97643709	1.63639	FOX{I1,J2}.p2	AK012694|Rpl23|65019|ribosomal protein L23	AK018730|Rpl23|65019|ribosomal protein L23	AK150671|Rpl23|65019|ribosomal protein L23	AK002579|Rpl23|65019|ribosomal protein L23	AK010680|Rpl23|65019|ribosomal protein L23
mm9_v1_chr19_+_7568529_7568529	1.63593	FOX{I1,J2}.p2	NM_001163505|Atl3|109168|atlastin GTPase 3
mm9_v1_chr2_-_30823346_30823454	1.63557	FOX{I1,J2}.p2	AK082936|Tor1a|30931|torsin family 1, member A (torsin A)	AK079728|Tor1a|30931|torsin family 1, member A (torsin A)	AJ298841|Tor1a|30931|torsin family 1, member A (torsin A)	AK038891|Tor1a|30931|torsin family 1, member A (torsin A)	AK160361|Tor1a|30931|torsin family 1, member A (torsin A)	BC017683|Tor1a|30931|torsin family 1, member A (torsin A)	NM_144884|Tor1a|30931|torsin family 1, member A (torsin A)
mm9_v1_chr11_-_103265172_103265227	1.63294	FOX{I1,J2}.p2	AK154703|Plekhm1|353047|pleckstrin homology domain containing, family M (with RUN domain) member 1
mm9_v1_chr8_+_69035638_69035658	1.62868	FOX{I1,J2}.p2	NM_028927|Tktl2|74419|transketolase-like 2	AK016603|Tktl2|74419|transketolase-like 2	AK029871|Tktl2|74419|transketolase-like 2	BC132110|Tktl2|74419|transketolase-like 2	BC132298|Tktl2|74419|transketolase-like 2
mm9_v1_chr6_+_128349783_128350065	1.62673	FOX{I1,J2}.p2	AJ278170|Nrip2|60345|nuclear receptor interacting protein 2	NM_001162858|Nrip2|60345|nuclear receptor interacting protein 2	NM_021717|Nrip2|60345|nuclear receptor interacting protein 2	AK156526|Nrip2|60345|nuclear receptor interacting protein 2	AK134689|Nrip2|60345|nuclear receptor interacting protein 2	BC115523|Nrip2|60345|nuclear receptor interacting protein 2	BC094230|Nrip2|60345|nuclear receptor interacting protein 2
mm9_v1_chr14_-_53087135_53087135	1.6255	FOX{I1,J2}.p2	NM_020513|Olfr1508|57270|olfactory receptor 1508
mm9_v1_chr6_-_49195555_49195581	1.62432	FOX{I1,J2}.p2	AK164994|Tra2a|101214|transformer 2 alpha homolog (Drosophila)
mm9_v1_chr6_+_34334201_34334334	1.62342	FOX{I1,J2}.p2	AK075865|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	NM_172398|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	BC026843|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK087002|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK082777|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK019906|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)	AK169490|Akr1b10|67861|aldo-keto reductase family 1, member B10 (aldose reductase)
mm9_v1_chr5_-_75440586_75440675	1.62223	FOX{I1,J2}.p2	BC048435|Chic2|74277|cysteine-rich hydrophobic domain 2	AK172289|Chic2|74277|cysteine-rich hydrophobic domain 2	AK006962|Chic2|74277|cysteine-rich hydrophobic domain 2	NM_028850|Chic2|74277|cysteine-rich hydrophobic domain 2
mm9_v1_chr3_+_41368801_41368825	1.61896	FOX{I1,J2}.p2	NM_001130186|Phf17|269424|PHD finger protein 17
mm9_v1_chrX_-_71618556_71618610	1.61676	FOX{I1,J2}.p2	EU599043|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599044|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	EU599045|Slc10a3-ubl4|100169864|Slc10a3-Ubl4 readthrough transcript	BC027440|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	NM_145406|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm9_v1_chr2_-_84567398_84567416	1.61601	FOX{I1,J2}.p2	AK145209|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	AK077647|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)
mm9_v1_chrX_-_160696001_160696124	1.61437	FOX{I1,J2}.p2	BC138104|Bmx|12169|BMX non-receptor tyrosine kinase	BC138105|Bmx|12169|BMX non-receptor tyrosine kinase	U88091|Bmx|12169|BMX non-receptor tyrosine kinase	AK080038|Bmx|12169|BMX non-receptor tyrosine kinase	AK040936|Bmx|12169|BMX non-receptor tyrosine kinase	NM_009759|Bmx|12169|BMX non-receptor tyrosine kinase
mm9_v1_chr1_-_52874276_52874420	1.61417	FOX{I1,J2}.p2	BC025072|Inpp1|16329|inositol polyphosphate-1-phosphatase	U27295|Inpp1|16329|inositol polyphosphate-1-phosphatase	AK078382|Inpp1|16329|inositol polyphosphate-1-phosphatase
mm9_v1_chr12_+_110031153_110031195	1.61267	FOX{I1,J2}.p2	AK166542|Yy1|22632|YY1 transcription factor
mm9_v1_chr1_-_177909236_177909246	1.61262	FOX{I1,J2}.p2	BC132651|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene	BC132653|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene	AK139805|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene	NM_001039518|B020018G12Rik|545388|RIKEN cDNA B020018G12 gene
mm9_v1_chr12_-_79944026_79944112	1.61195	FOX{I1,J2}.p2	
mm9_v1_chr17_+_21587315_21587362	1.60993	FOX{I1,J2}.p2	NM_009558|Zfp51|22709|zinc finger protein 51	X74855|Zfp51|22709|zinc finger protein 51	AK154157|Zfp51|22709|zinc finger protein 51	AK133677|Zfp51|22709|zinc finger protein 51	BC011183|Zfp51|22709|zinc finger protein 51
mm9_v1_chr2_-_164705231_164705295	1.60502	FOX{I1,J2}.p2	BC037706|4930445K14Rik|74886|RIKEN cDNA 4930445K14 gene	AK142117|4930445K14Rik|74886|RIKEN cDNA 4930445K14 gene	AK015392|4930445K14Rik|74886|RIKEN cDNA 4930445K14 gene
mm9_v1_chr8_-_125005680_125005754	1.60265	FOX{I1,J2}.p2	
mm9_v1_chr3_+_84668066_84668066	1.59885	FOX{I1,J2}.p2	BC066093|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_001177774|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr10_-_78180902_78181043	1.59872	FOX{I1,J2}.p2	AJ007750|Casp14|12365|caspase 14	BC101959|Casp14|12365|caspase 14	BC101960|Casp14|12365|caspase 14	BC103555|Casp14|12365|caspase 14	BC103556|Casp14|12365|caspase 14	AK081645|Casp14|12365|caspase 14	NM_009809|Casp14|12365|caspase 14
mm9_v1_chr3_+_153507205_153507229	1.59473	FOX{I1,J2}.p2	BC049572|Asb17|66772|ankyrin repeat and SOCS box-containing 17	AF425641|Asb17|66772|ankyrin repeat and SOCS box-containing 17	AK016273|Asb17|66772|ankyrin repeat and SOCS box-containing 17	NM_025758|Asb17|66772|ankyrin repeat and SOCS box-containing 17	AK017090|Asb17|66772|ankyrin repeat and SOCS box-containing 17
mm9_v1_chr11_+_49016828_49017024	1.59448	FOX{I1,J2}.p2	AK088060|Zfp62|22720|zinc finger protein 62	AK157730|Zfp62|22720|zinc finger protein 62	AK167091|Zfp62|22720|zinc finger protein 62	AK028351|Zfp62|22720|zinc finger protein 62	AK048619|Zfp62|22720|zinc finger protein 62	NM_001024846|Zfp62|22720|zinc finger protein 62	NM_009562|Zfp62|22720|zinc finger protein 62	AK154767|Zfp62|22720|zinc finger protein 62	AK079774|Zfp62|22720|zinc finger protein 62	AK165654|Zfp62|22720|zinc finger protein 62
mm9_v1_chr6_+_29269139_29269198	1.59426	FOX{I1,J2}.p2	AK133908|Fam71f1|330277|family with sequence similarity 71, member F1	BC048651|Fam71f1|330277|family with sequence similarity 71, member F1	NM_207258|Fam71f1|330277|family with sequence similarity 71, member F1	BC147513|Fam71f1|330277|family with sequence similarity 71, member F1	BC172074|Fam71f1|330277|family with sequence similarity 71, member F1	BC172085|Fam71f1|330277|family with sequence similarity 71, member F1	BC172086|Fam71f1|330277|family with sequence similarity 71, member F1	AB473725|Fam71f1|330277|family with sequence similarity 71, member F1
mm9_v1_chr15_+_79921725_79921855	1.59288	FOX{I1,J2}.p2	BC138728|Syngr1|20972|synaptogyrin 1	BC138729|Syngr1|20972|synaptogyrin 1	NM_009303|Syngr1|20972|synaptogyrin 1	NM_207708|Syngr1|20972|synaptogyrin 1	AK044007|Syngr1|20972|synaptogyrin 1	AJ002306|Syngr1|20972|synaptogyrin 1	AK156134|Syngr1|20972|synaptogyrin 1	AK002972|Syngr1|20972|synaptogyrin 1	AK010442|Syngr1|20972|synaptogyrin 1	AK153096|Syngr1|20972|synaptogyrin 1	AK153187|Syngr1|20972|synaptogyrin 1	BC048172|Syngr1|20972|synaptogyrin 1	AK194549|Syngr1|20972|synaptogyrin 1
mm9_v1_chr6_+_123974775_123974775	1.58827	FOX{I1,J2}.p2	AF053985|Vmn2r26|56552|vomeronasal 2, receptor 26	AY426342|Vmn2r26|56552|vomeronasal 2, receptor 26	NM_019917|Vmn2r26|56552|vomeronasal 2, receptor 26
mm9_v1_chr13_-_3803547_3803563	1.58778	FOX{I1,J2}.p2	BC005457|Calml3|70405|calmodulin-like 3	AK010118|Calml3|70405|calmodulin-like 3	NM_027416|Calml3|70405|calmodulin-like 3
mm9_v1_chr1_-_44159187_44159306	1.58762	FOX{I1,J2}.p2	BC116881|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene	BC119032|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene	AK160565|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene	NM_029368|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene	BC099557|1700029F09Rik|75623|RIKEN cDNA 1700029F09 gene
mm9_v1_chr16_-_85550617_85550674	1.58734	FOX{I1,J2}.p2	BC099957|Cyyr1|224405|cysteine and tyrosine-rich protein 1	NM_144853|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK031840|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AY061854|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK171936|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK163137|Cyyr1|224405|cysteine and tyrosine-rich protein 1	AK158088|Cyyr1|224405|cysteine and tyrosine-rich protein 1
mm9_v1_chr6_+_70321430_70321482	1.58321	FOX{I1,J2}.p2	
mm9_v1_chr12_+_105452740_105452842	1.57949	FOX{I1,J2}.p2	BC119537|Serpina3g|20715|serine (or cysteine) peptidase inhibitor, clade A, member 3G	AK149697|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	AK150157|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	AK156086|Serpina3h|546546|serine (or cysteine) peptidase inhibitor, clade A, member 3H	BC132647|Serpina3h|546546|serine (or cysteine) peptidase inhibitor, clade A, member 3H	BC132649|Serpina3h|546546|serine (or cysteine) peptidase inhibitor, clade A, member 3H	NM_001168294|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	NM_001168295|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	NM_009251|Serpina3g|20715|serine (or cysteine) peptidase inhibitor, clade A, member 3G	AK156462|Serpina3g|20715|serine (or cysteine) peptidase inhibitor, clade A, member 3G	BC049975|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	AK138954|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F	NM_001033335|Serpina3f|238393|serine (or cysteine) peptidase inhibitor, clade A, member 3F
mm9_v1_chr7_+_51565563_51565633	1.57433	FOX{I1,J2}.p2	NM_001034115|Shank1|243961|SH3/ankyrin domain gene 1
mm9_v1_chr18_+_47009692_47009701	1.57387	FOX{I1,J2}.p2	AK014652|4833403I15Rik|74574|RIKEN cDNA 4833403I15 gene	NM_029008|4833403I15Rik|74574|RIKEN cDNA 4833403I15 gene	BC113158|4833403I15Rik|74574|RIKEN cDNA 4833403I15 gene
mm9_v1_chr6_-_98978185_98978383	1.57316	FOX{I1,J2}.p2	AK077062|Foxp1|108655|forkhead box P1	AK144920|Foxp1|108655|forkhead box P1	NM_001197322|Foxp1|108655|forkhead box P1
mm9_v1_chr1_-_88253690_88253764	1.57144	FOX{I1,J2}.p2	AK050958|Ncl|17975|nucleolin
mm9_v1_chr4_+_51229549_51229549	1.57054	FOX{I1,J2}.p2	AK015651|Cylc2|74914|cylicin, basic protein of sperm head cytoskeleton 2	NM_001162865|Cylc2|74914|cylicin, basic protein of sperm head cytoskeleton 2
mm9_v1_chr11_-_103815334_103815354	1.56791	FOX{I1,J2}.p2	AK042341|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK049281|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK051430|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK141986|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK153905|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr11_+_62387987_62388017	1.56466	FOX{I1,J2}.p2	NM_011706|Trpv2|22368|transient receptor potential cation channel, subfamily V, member 2
mm9_v1_chr10_+_62409776_62409857	1.56464	FOX{I1,J2}.p2	NM_177372|Dna2|327762|DNA replication helicase 2 homolog (yeast)	AK129051|Dna2|327762|DNA replication helicase 2 homolog (yeast)	AK028381|Dna2|327762|DNA replication helicase 2 homolog (yeast)	BC115716|Dna2|327762|DNA replication helicase 2 homolog (yeast)	BC030382|Dna2|327762|DNA replication helicase 2 homolog (yeast)
mm9_v1_chr2_+_164286416_164286607	1.56187	FOX{I1,J2}.p2	AK007882|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	NM_025575|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK139605|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK011753|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK003071|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK013220|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK032073|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK009684|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK075770|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK005510|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK148305|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK005249|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm9_v1_chr1_-_175696989_175697156	1.56036	FOX{I1,J2}.p2	AK150522|Ifi204|15951|interferon activated gene 204	NM_008329|Ifi204|15951|interferon activated gene 204	AK138785|Ifi204|15951|interferon activated gene 204
mm9_v1_chr5_+_91456489_91456542	1.55907	FOX{I1,J2}.p2	BC119291|Epgn|71920|epithelial mitogen	BC119293|Epgn|71920|epithelial mitogen	BC145041|Epgn|71920|epithelial mitogen	AJ291391|Epgn|71920|epithelial mitogen	NM_053087|Epgn|71920|epithelial mitogen
mm9_v1_chr15_-_76500300_76500377	1.55758	FOX{I1,J2}.p2	AF079514|Foxh1|14106|forkhead box H1	AF110506|Foxh1|14106|forkhead box H1	AF177770|Foxh1|14106|forkhead box H1	AB221574|Foxh1|14106|forkhead box H1	AF069303|Foxh1|14106|forkhead box H1	NM_007989|Foxh1|14106|forkhead box H1	BC119156|Foxh1|14106|forkhead box H1	BC137781|Foxh1|14106|forkhead box H1
mm9_v1_chr6_+_56952293_56952348	1.55205	FOX{I1,J2}.p2	BC125532|Vmn1r6|171193|vomeronasal 1 receptor 6	BC125534|Vmn1r6|171193|vomeronasal 1 receptor 6	NM_134175|Vmn1r6|171193|vomeronasal 1 receptor 6
mm9_v1_chr6_+_140571183_140571183	1.54475	FOX{I1,J2}.p2	AK029011|Aebp2|11569|AE binding protein 2	NM_178803|Aebp2|11569|AE binding protein 2
mm9_v1_chr11_-_54965186_54965209	1.54454	FOX{I1,J2}.p2	AY211261|Slc36a3|215332|solute carrier family 36 (proton/amino acid symporter), member 3	AK132910|Slc36a3|215332|solute carrier family 36 (proton/amino acid symporter), member 3	AF453745|Slc36a3|215332|solute carrier family 36 (proton/amino acid symporter), member 3	NM_172258|Slc36a3|215332|solute carrier family 36 (proton/amino acid symporter), member 3	BC049682|Slc36a3|215332|solute carrier family 36 (proton/amino acid symporter), member 3
mm9_v1_chr17_-_47551659_47551659	1.54257	FOX{I1,J2}.p2	AK005579|1700001C19Rik|75462|RIKEN cDNA 1700001C19 gene	NM_001172091|1700001C19Rik|75462|RIKEN cDNA 1700001C19 gene
mm9_v1_chr18_+_32975036_32975036	1.5421	FOX{I1,J2}.p2	AF232937|Tslp|53603|thymic stromal lymphopoietin	BC130230|Tslp|53603|thymic stromal lymphopoietin	NM_021367|Tslp|53603|thymic stromal lymphopoietin
mm9_v1_chr12_-_102321835_102321908	1.54123	FOX{I1,J2}.p2	AK051239|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	AK031629|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	AK156272|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	AK152480|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
mm9_v1_chrX_+_147024463_147024599	1.53937	FOX{I1,J2}.p2	AK132629|Pfkfb1|18639|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1	NM_008824|Pfkfb1|18639|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1	BC132561|Pfkfb1|18639|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1	BC132563|Pfkfb1|18639|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
mm9_v1_chr5_+_88885015_88885035	1.53428	FOX{I1,J2}.p2	AK017250|Ambn|11698|ameloblastin	BC087927|Ambn|11698|ameloblastin	NM_009664|Ambn|11698|ameloblastin	U65021|Ambn|11698|ameloblastin
mm9_v1_chrX_-_20639111_20639168	1.53424	FOX{I1,J2}.p2	AK155039|Zfp182|319535|zinc finger protein 182	BC063066|Zfp182|319535|zinc finger protein 182	AK045698|Zfp182|319535|zinc finger protein 182	NM_001013387|Zfp182|319535|zinc finger protein 182	NM_001111076|Zfp182|319535|zinc finger protein 182	AK043973|Zfp182|319535|zinc finger protein 182
mm9_v1_chr17_-_33204849_33205002	1.53367	FOX{I1,J2}.p2	BC150955|4921501E09Rik|74042|RIKEN cDNA 4921501E09 gene	AK014800|4921501E09Rik|74042|RIKEN cDNA 4921501E09 gene	AK077044|4921501E09Rik|74042|RIKEN cDNA 4921501E09 gene	NM_001009544|4921501E09Rik|74042|RIKEN cDNA 4921501E09 gene
mm9_v1_chr15_+_54242324_54242328	1.53313	FOX{I1,J2}.p2	AB016429|Colec10|239447|collectin sub-family member 10	AK028423|Colec10|239447|collectin sub-family member 10	BC106836|Colec10|239447|collectin sub-family member 10	BC106837|Colec10|239447|collectin sub-family member 10	BC108945|Colec10|239447|collectin sub-family member 10	NM_173422|Colec10|239447|collectin sub-family member 10
mm9_v1_chr2_-_38142866_38142913	1.53134	FOX{I1,J2}.p2	BC027786|Dennd1a|227801|DENN/MADD domain containing 1A	AK137530|Dennd1a|227801|DENN/MADD domain containing 1A	BC023016|Dennd1a|227801|DENN/MADD domain containing 1A	NM_146122|Dennd1a|227801|DENN/MADD domain containing 1A
mm9_v1_chr9_-_44817429_44817729	1.5305	FOX{I1,J2}.p2	EF474454|Cd3e|12501|CD3 antigen, epsilon polypeptide	GU456631|Cd3e|12501|CD3 antigen, epsilon polypeptide	BC098236|Cd3e|12501|CD3 antigen, epsilon polypeptide	BC028636|Cd3e|12501|CD3 antigen, epsilon polypeptide	BC145926|Cd3e|12501|CD3 antigen, epsilon polypeptide	BC145954|Cd3e|12501|CD3 antigen, epsilon polypeptide	J02990|Cd3e|12501|CD3 antigen, epsilon polypeptide	NM_007648|Cd3e|12501|CD3 antigen, epsilon polypeptide	AK041607|Cd3e|12501|CD3 antigen, epsilon polypeptide
mm9_v1_chr15_-_97077552_97077717	1.52327	FOX{I1,J2}.p2	BC095990|Amigo2|105827|adhesion molecule with Ig like domain 2	AK030848|Amigo2|105827|adhesion molecule with Ig like domain 2	AK038783|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_001164563|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_001164602|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_178114|Amigo2|105827|adhesion molecule with Ig like domain 2
mm9_v1_chr9_-_76171352_76171416	1.52089	FOX{I1,J2}.p2	AY336084|Hcrtr2|387285|hypocretin (orexin) receptor 2	AY336085|Hcrtr2|387285|hypocretin (orexin) receptor 2	BC140957|Hcrtr2|387285|hypocretin (orexin) receptor 2	AK038551|Hcrtr2|387285|hypocretin (orexin) receptor 2	AK048781|Hcrtr2|387285|hypocretin (orexin) receptor 2	NM_198962|Hcrtr2|387285|hypocretin (orexin) receptor 2	AK079572|Hcrtr2|387285|hypocretin (orexin) receptor 2
mm9_v1_chr10_-_129717244_129717295	1.51996	FOX{I1,J2}.p2	BC042639|Neurod4|11923|neurogenic differentiation 4	AK012183|Neurod4|11923|neurogenic differentiation 4	BC054391|Neurod4|11923|neurogenic differentiation 4	NM_007501|Neurod4|11923|neurogenic differentiation 4
mm9_v1_chr5_-_21290925_21290949	1.51374	FOX{I1,J2}.p2	U53208|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2	AK161347|Dnajc2|22791|DnaJ (Hsp40) homolog, subfamily C, member 2
mm9_v1_chr13_-_113442508_113442517	1.51274	FOX{I1,J2}.p2	AK014844|Ddx4|13206|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	AK133366|Ddx4|13206|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_001145885|Ddx4|13206|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4	NM_010029|Ddx4|13206|DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
mm9_v1_chr14_-_25306261_25306271	1.51092	FOX{I1,J2}.p2	NM_001081247|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	AK170475|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A
mm9_v1_chr10_+_79635688_79635690	1.51037	FOX{I1,J2}.p2	AK005397|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	AK168176|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	NM_027207|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	AK050606|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	BC146018|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene	BC146020|1600002K03Rik|69770|RIKEN cDNA 1600002K03 gene
mm9_v1_chr3_+_53267587_53267689	1.50851	FOX{I1,J2}.p2	AK034174|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene
mm9_v1_chr18_+_52491189_52491233	1.50704	FOX{I1,J2}.p2	AK015346|Ftmt|67634|ferritin mitochondrial	AK015400|Ftmt|67634|ferritin mitochondrial	NM_026286|Ftmt|67634|ferritin mitochondrial	AK133009|Ftmt|67634|ferritin mitochondrial	BC115514|Ftmt|67634|ferritin mitochondrial	BC115515|Ftmt|67634|ferritin mitochondrial
mm9_v1_chr18_-_49915209_49915277	1.50565	FOX{I1,J2}.p2	BC139347|Dtwd2|68857|DTW domain containing 2	BC139348|Dtwd2|68857|DTW domain containing 2	BC145608|Dtwd2|68857|DTW domain containing 2	BC145609|Dtwd2|68857|DTW domain containing 2	AK004450|Dtwd2|68857|DTW domain containing 2	AK144689|Dtwd2|68857|DTW domain containing 2	NM_001170960|Dtwd2|68857|DTW domain containing 2	NM_026854|Dtwd2|68857|DTW domain containing 2
mm9_v1_chr6_-_50604391_50604439	1.50506	FOX{I1,J2}.p2	AB040289|Npvf|60531|neuropeptide VF precursor	AF330058|Npvf|60531|neuropeptide VF precursor	NM_021892|Npvf|60531|neuropeptide VF precursor	AK138200|Npvf|60531|neuropeptide VF precursor	BC116905|Npvf|60531|neuropeptide VF precursor	BC116907|Npvf|60531|neuropeptide VF precursor
mm9_v1_chr10_-_10277885_10278075	1.50023	FOX{I1,J2}.p2	AB232627|Rab32|67844|RAB32, member RAS oncogene family	AY135650|Rab32|67844|RAB32, member RAS oncogene family	BC016409|Rab32|67844|RAB32, member RAS oncogene family	BC055945|Rab32|67844|RAB32, member RAS oncogene family	AK163620|Rab32|67844|RAB32, member RAS oncogene family	AK151543|Rab32|67844|RAB32, member RAS oncogene family	AK088661|Rab32|67844|RAB32, member RAS oncogene family	NM_026405|Rab32|67844|RAB32, member RAS oncogene family	AK012701|Rab32|67844|RAB32, member RAS oncogene family	AK159102|Rab32|67844|RAB32, member RAS oncogene family	AK159901|Rab32|67844|RAB32, member RAS oncogene family
mm9_v1_chrX_+_106392094_106392130	1.49821	FOX{I1,J2}.p2	NM_001037917|Gm6377|622976|predicted gene 6377	AK080287|Gm6377|622976|predicted gene 6377	AK138683|Gm6377|622976|predicted gene 6377	BC147431|Gm6377|622976|predicted gene 6377	BC147432|Gm6377|622976|predicted gene 6377
mm9_v1_chr1_+_74438182_74438368	1.49791	FOX{I1,J2}.p2	NM_153088|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	AK089478|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC049184|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	BC058085|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm9_v1_chr19_+_55255374_55255445	1.49585	FOX{I1,J2}.p2	NM_009348|Tectb|21684|tectorin beta	X99806|Tectb|21684|tectorin beta	BC138888|Tectb|21684|tectorin beta	BC138889|Tectb|21684|tectorin beta
mm9_v1_chr13_+_33057312_33057381	1.49536	FOX{I1,J2}.p2	AK078753|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	AK154048|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	AK171741|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	AK084785|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	BC061050|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	NM_011454|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	U96707|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b
mm9_v1_chr15_-_24957039_24957112	1.48945	FOX{I1,J2}.p2	AK033069|Gm2824|100040529|predicted gene 2824	AK083927|Gm2824|100040529|predicted gene 2824
mm9_v1_chrX_+_7274259_7274353	1.4894	FOX{I1,J2}.p2	NM_173747|Gpkow|209416|G patch domain and KOW motifs	AK017864|Gpkow|209416|G patch domain and KOW motifs	AK144167|Gpkow|209416|G patch domain and KOW motifs	AK028433|Gpkow|209416|G patch domain and KOW motifs	BC092224|Gpkow|209416|G patch domain and KOW motifs
mm9_v1_chrX_-_106029678_106029693	1.48856	FOX{I1,J2}.p2	AK050539|Brwd3|382236|bromodomain and WD repeat domain containing 3	AK163354|Brwd3|382236|bromodomain and WD repeat domain containing 3	NM_001081477|Brwd3|382236|bromodomain and WD repeat domain containing 3
mm9_v1_chr3_-_107024646_107024651	1.488	FOX{I1,J2}.p2	BC147477|Cym|229697|chymosin	BC171994|Cym|229697|chymosin	NM_001111143|Cym|229697|chymosin
mm9_v1_chr4_+_12067263_12067419	1.48795	FOX{I1,J2}.p2	NM_028226|Rbm12b|72397|RNA binding motif protein 12B	AK030861|Rbm12b|72397|RNA binding motif protein 12B
mm9_v1_chr3_-_51129908_51129958	1.48494	FOX{I1,J2}.p2	AF256216|Elf2|69257|E74-like factor 2	AF256217|Elf2|69257|E74-like factor 2	NM_023502|Elf2|69257|E74-like factor 2	BC092057|Elf2|69257|E74-like factor 2
mm9_v1_chr13_+_49748707_49748855	1.48314	FOX{I1,J2}.p2	AK147172|Nol8|70930|nucleolar protein 8	NM_001081350|Nol8|70930|nucleolar protein 8	BC125575|Nol8|70930|nucleolar protein 8	BC125579|Nol8|70930|nucleolar protein 8	AK029961|Nol8|70930|nucleolar protein 8	BC049166|Nol8|70930|nucleolar protein 8
mm9_v1_chr17_-_44951745_44951745	1.48142	FOX{I1,J2}.p2	DQ458792|Runx2|12393|runt related transcription factor 2	NM_001146038|Runx2|12393|runt related transcription factor 2	NM_009820|Runx2|12393|runt related transcription factor 2
mm9_v1_chr9_+_104955563_104955826	1.48121	FOX{I1,J2}.p2	AK008592|Mrpl3|94062|mitochondrial ribosomal protein L3	AK145687|Mrpl3|94062|mitochondrial ribosomal protein L3	AK169272|Mrpl3|94062|mitochondrial ribosomal protein L3	NM_053159|Mrpl3|94062|mitochondrial ribosomal protein L3	AK077857|Mrpl3|94062|mitochondrial ribosomal protein L3	AK002509|Mrpl3|94062|mitochondrial ribosomal protein L3	BC011128|Mrpl3|94062|mitochondrial ribosomal protein L3	BC016586|Mrpl3|94062|mitochondrial ribosomal protein L3	BC034877|Mrpl3|94062|mitochondrial ribosomal protein L3	AB049633|Mrpl3|94062|mitochondrial ribosomal protein L3	AK217246|Mrpl3|94062|mitochondrial ribosomal protein L3
mm9_v1_chr5_-_117838974_117839070	1.48052	FOX{I1,J2}.p2	AK011931|Rfc5|72151|replication factor C (activator 1) 5	AK171372|Rfc5|72151|replication factor C (activator 1) 5	BC089001|Rfc5|72151|replication factor C (activator 1) 5	NM_028128|Rfc5|72151|replication factor C (activator 1) 5	AK011489|Rfc5|72151|replication factor C (activator 1) 5	AK150036|Rfc5|72151|replication factor C (activator 1) 5	AK170211|Rfc5|72151|replication factor C (activator 1) 5
mm9_v1_chrX_-_165092598_165092599	1.47907	FOX{I1,J2}.p2	AK053927|Msl3|17692|male-specific lethal 3 homolog (Drosophila)
mm9_v1_chr6_+_24807982_24808063	1.47892	FOX{I1,J2}.p2	AK017112|Hyal5|74468|hyaluronoglucosaminidase 5	AK133387|Hyal5|74468|hyaluronoglucosaminidase 5	NM_028957|Hyal5|74468|hyaluronoglucosaminidase 5	BC145992|Hyal5|74468|hyaluronoglucosaminidase 5	BC145994|Hyal5|74468|hyaluronoglucosaminidase 5
mm9_v1_chr14_-_21553511_21553571	1.47554	FOX{I1,J2}.p2	BC050829|Ndst2|17423|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2	AK150100|Ndst2|17423|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2	AK170298|Ndst2|17423|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
mm9_v1_chr12_-_102267095_102267118	1.47461	FOX{I1,J2}.p2	AK137260|Ccdc88c|68339|coiled-coil domain containing 88C	AK002458|Ccdc88c|68339|coiled-coil domain containing 88C
mm9_v1_chr12_+_80309899_80309933	1.47356	FOX{I1,J2}.p2	AK164157|Rdh12|77974|retinol dehydrogenase 12	AK039233|Rdh12|77974|retinol dehydrogenase 12	NM_030017|Rdh12|77974|retinol dehydrogenase 12	AK020927|Rdh12|77974|retinol dehydrogenase 12	BC016204|Rdh12|77974|retinol dehydrogenase 12	BC067213|Rdh12|77974|retinol dehydrogenase 12
mm9_v1_chr10_-_30338265_30338290	1.47144	FOX{I1,J2}.p2	AK002482|Hint3|66847|histidine triad nucleotide binding protein 3
mm9_v1_chr16_-_89048013_89048143	1.47092	FOX{I1,J2}.p2	AF345293|Krtap16-10|71369|keratin associated protein 16-10	BC132612|Krtap16-8|68484|keratin associated protein 16-8	AF345298|Krtap16-8|68484|keratin associated protein 16-8	BC059086|Krtap16-8|68484|keratin associated protein 16-8	AK003281|Krtap16-8|68484|keratin associated protein 16-8	NM_130856|Krtap16-8|68484|keratin associated protein 16-8
mm9_v1_chr8_+_123209286_123209298	1.46806	FOX{I1,J2}.p2	
mm9_v1_chr2_+_91105271_91105495	1.46381	FOX{I1,J2}.p2	NM_001166024|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	NM_023854|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	BC005495|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AK149837|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	EF437354|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AK009565|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AK169144|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AF229439|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2	AK168489|Arfgap2|77038|ADP-ribosylation factor GTPase activating protein 2
mm9_v1_chr16_+_43321404_43321450	1.46206	FOX{I1,J2}.p2	
mm9_v1_chr3_-_127111869_127111953	1.4585	FOX{I1,J2}.p2	AK047866|Ank2|109676|ankyrin 2, brain	AK084070|Ank2|109676|ankyrin 2, brain	AK036179|Ank2|109676|ankyrin 2, brain	AK166115|Ank2|109676|ankyrin 2, brain	AK046947|Ank2|109676|ankyrin 2, brain
mm9_v1_chr11_+_96874882_96874882	1.45773	FOX{I1,J2}.p2	AY338955|Sp6|83395|trans-acting transcription factor 6	NM_031183|Sp6|83395|trans-acting transcription factor 6
mm9_v1_chr16_+_17146981_17147071	1.45764	FOX{I1,J2}.p2	AK032396|Ydjc|69101|YdjC homolog (bacterial)	AK140044|Ydjc|69101|YdjC homolog (bacterial)	BC030425|Ydjc|69101|YdjC homolog (bacterial)	AK007503|Ydjc|69101|YdjC homolog (bacterial)	BC115584|Ydjc|69101|YdjC homolog (bacterial)	BC115585|Ydjc|69101|YdjC homolog (bacterial)	NM_026940|Ydjc|69101|YdjC homolog (bacterial)
mm9_v1_chr16_+_44370127_44370136	1.45583	FOX{I1,J2}.p2	BC024956|Spice1|212514|spindle and centriole associated protein 1
mm9_v1_chr10_-_80129720_80129733	1.45447	FOX{I1,J2}.p2	BC013844|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr13_+_30228352_30228364	1.45295	FOX{I1,J2}.p2	NM_153546|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	BC023845|Mboat1|218121|membrane bound O-acyltransferase domain containing 1
mm9_v1_chr4_+_130219255_130219279	1.45025	FOX{I1,J2}.p2	AK162742|Pum1|80912|pumilio 1 (Drosophila)	NM_001159603|Pum1|80912|pumilio 1 (Drosophila)	NM_001159604|Pum1|80912|pumilio 1 (Drosophila)	NM_001159605|Pum1|80912|pumilio 1 (Drosophila)	NM_001159606|Pum1|80912|pumilio 1 (Drosophila)	NM_030722|Pum1|80912|pumilio 1 (Drosophila)	AK141921|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chrX_+_12869324_12869430	1.44863	FOX{I1,J2}.p2	AK211517|Ddx3x|13205|DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked
mm9_v1_chr18_+_36823713_36823835	1.44696	FOX{I1,J2}.p2	BC061242|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3	NM_201256|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3	BC111107|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3	BC038258|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3	AY226182|Eif4ebp3|108112|eukaryotic translation initiation factor 4E binding protein 3
mm9_v1_chr1_+_37356722_37356738	1.44518	FOX{I1,J2}.p2	AK162581|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	NM_030266|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I
mm9_v1_chr3_+_96474053_96474053	1.44345	FOX{I1,J2}.p2	NM_001081139|Ankrd35|213121|ankyrin repeat domain 35
mm9_v1_chr12_+_70269800_70269846	1.43514	FOX{I1,J2}.p2	AK144741|Lrr1|69706|leucine rich repeat protein 1	NM_001081406|Lrr1|69706|leucine rich repeat protein 1	AK010419|Lrr1|69706|leucine rich repeat protein 1	BC075711|Lrr1|69706|leucine rich repeat protein 1	BC117053|Lrr1|69706|leucine rich repeat protein 1	BC117055|Lrr1|69706|leucine rich repeat protein 1	BC022648|Lrr1|69706|leucine rich repeat protein 1
mm9_v1_chr3_+_108743001_108743040	1.43446	FOX{I1,J2}.p2	AK085587|4921515J06Rik|66715|RIKEN cDNA 4921515J06 gene	NM_025723|4921515J06Rik|66715|RIKEN cDNA 4921515J06 gene	AK014900|4921515J06Rik|66715|RIKEN cDNA 4921515J06 gene
mm9_v1_chr3_+_27215949_27216031	1.43417	FOX{I1,J2}.p2	AK153581|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	AK144931|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	AK142960|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	AK157633|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	NM_009425|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	U37522|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	BC138807|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	BC138808|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10	BC011469|Tnfsf10|22035|tumor necrosis factor (ligand) superfamily, member 10
mm9_v1_chr13_-_41582649_41582707	1.43256	FOX{I1,J2}.p2	BC053713|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK083374|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK030985|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AF009366|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	NM_001111324|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9
mm9_v1_chr16_+_87553574_87553800	1.43213	FOX{I1,J2}.p2	AY033899|ORF63|224419|open reading frame 63	NM_144854|ORF63|224419|open reading frame 63	AK041664|ORF63|224419|open reading frame 63	BC115624|ORF63|224419|open reading frame 63	BC115625|ORF63|224419|open reading frame 63
mm9_v1_chr5_+_145803858_145803882	1.43205	FOX{I1,J2}.p2	AK006086|1700018F24Rik|69396|RIKEN cDNA 1700018F24 gene	NM_027069|1700018F24Rik|69396|RIKEN cDNA 1700018F24 gene	BC147518|1700018F24Rik|69396|RIKEN cDNA 1700018F24 gene	BC147521|1700018F24Rik|69396|RIKEN cDNA 1700018F24 gene
mm9_v1_chr6_+_32000267_32000301	1.43181	FOX{I1,J2}.p2	BC059718|1700012A03Rik|76382|RIKEN cDNA 1700012A03 gene	AK005884|1700012A03Rik|76382|RIKEN cDNA 1700012A03 gene	NM_029587|1700012A03Rik|76382|RIKEN cDNA 1700012A03 gene	BC087908|1700012A03Rik|76382|RIKEN cDNA 1700012A03 gene
mm9_v1_chr5_-_124171015_124171067	1.43173	FOX{I1,J2}.p2	AK156770|Zcchc8|70650|zinc finger, CCHC domain containing 8	AK032349|Zcchc8|70650|zinc finger, CCHC domain containing 8	NM_027494|Zcchc8|70650|zinc finger, CCHC domain containing 8
mm9_v1_chr5_+_140981515_140981584	1.43054	FOX{I1,J2}.p2	NM_021528|Chst12|59031|carbohydrate sulfotransferase 12	AK142155|Chst12|59031|carbohydrate sulfotransferase 12	BC003201|Chst12|59031|carbohydrate sulfotransferase 12
mm9_v1_chr2_+_85815369_85815369	1.4291	FOX{I1,J2}.p2	BC150841|Olfr1029|258154|olfactory receptor 1029	NM_001011852|Olfr1029|258154|olfactory receptor 1029
mm9_v1_chr8_-_48799252_48799297	1.42555	FOX{I1,J2}.p2	AK048437|Cdkn2aip|70925|CDKN2A interacting protein	AK078329|Cdkn2aip|70925|CDKN2A interacting protein	AK167684|Cdkn2aip|70925|CDKN2A interacting protein	AK133831|Cdkn2aip|70925|CDKN2A interacting protein	NM_172407|Cdkn2aip|70925|CDKN2A interacting protein	AK035426|Cdkn2aip|70925|CDKN2A interacting protein	AK089057|Cdkn2aip|70925|CDKN2A interacting protein
mm9_v1_chr5_+_110783114_110783176	1.42551	FOX{I1,J2}.p2	AK141249|Gm1679|381667|predicted gene 1679	NM_001033459|Gm1679|381667|predicted gene 1679	BC147447|Gm1679|381667|predicted gene 1679	BC147469|Gm1679|381667|predicted gene 1679	BC171993|Gm1679|381667|predicted gene 1679
mm9_v1_chr14_+_21113911_21113999	1.42203	FOX{I1,J2}.p2	NM_026341|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	AK161922|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	AK017031|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC049948|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC056982|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC040807|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC021366|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC038023|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13	BC037091|Nudt13|67725|nudix (nucleoside diphosphate linked moiety X)-type motif 13
mm9_v1_chr4_+_98697606_98697678	1.41892	FOX{I1,J2}.p2	AK149450|Angptl3|30924|angiopoietin-like 3	NM_013913|Angptl3|30924|angiopoietin-like 3	AK149555|Angptl3|30924|angiopoietin-like 3	BC019491|Angptl3|30924|angiopoietin-like 3	AF162224|Angptl3|30924|angiopoietin-like 3
mm9_v1_chr12_-_40860769_40860814	1.41887	FOX{I1,J2}.p2	AK133484|Scin|20259|scinderin	AK167739|Scin|20259|scinderin	BC063328|Scin|20259|scinderin	U04354|Scin|20259|scinderin	Y13971|Scin|20259|scinderin	AK173295|Scin|20259|scinderin	AK171530|Scin|20259|scinderin	NM_001146196|Scin|20259|scinderin	NM_009132|Scin|20259|scinderin
mm9_v1_chr3_+_121747377_121747377	1.41861	FOX{I1,J2}.p2	AF000149|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	BC057853|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	NM_007378|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4
mm9_v1_chr8_-_44750913_44750913	1.41747	FOX{I1,J2}.p2	NM_145745|Adam34|252866|a disintegrin and metallopeptidase domain 34
mm9_v1_chr1_+_9537027_9537275	1.41494	FOX{I1,J2}.p2	AK214958|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)	AK013172|Rrs1|59014|RRS1 ribosome biogenesis regulator homolog (S. cerevisiae)
mm9_v1_chr17_-_9862538_9862568	1.41468	FOX{I1,J2}.p2	BC113177|Pabpc6|67543|poly(A) binding protein, cytoplasmic 6	AK029765|Pabpc6|67543|poly(A) binding protein, cytoplasmic 6	AK016578|Pabpc6|67543|poly(A) binding protein, cytoplasmic 6	NM_001163836|Pabpc6|67543|poly(A) binding protein, cytoplasmic 6
mm9_v1_chr2_-_44965603_44965763	1.41441	FOX{I1,J2}.p2	AK012377|Zeb2|24136|zinc finger E-box binding homeobox 2	AF033116|Zeb2|24136|zinc finger E-box binding homeobox 2	AK141157|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr6_-_87793898_87794088	1.40781	FOX{I1,J2}.p2	AK207643|Cnbp|12785|cellular nucleic acid binding protein	AK188144|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr4_+_101659444_101659444	1.40713	FOX{I1,J2}.p2	NM_001085520|Gm12789|381536|predicted gene 12789
mm9_v1_chr15_-_80935436_80935488	1.40441	FOX{I1,J2}.p2	NM_153049|Mkl1|223701|MKL (megakaryoblastic leukemia)/myocardin-like 1	AK155937|Mkl1|223701|MKL (megakaryoblastic leukemia)/myocardin-like 1
mm9_v1_chr6_+_89046108_89046173	1.40269	FOX{I1,J2}.p2	BC098480|4933427D06Rik|232217|RIKEN cDNA 4933427D06 gene	NM_175017|4933427D06Rik|232217|RIKEN cDNA 4933427D06 gene	AK030235|4933427D06Rik|232217|RIKEN cDNA 4933427D06 gene
mm9_v1_chr1_-_18255160_18255218	1.39997	FOX{I1,J2}.p2	DQ012028|Gm15386|654464|predicted gene 15386	NM_001040027|Gm15386|654464|predicted gene 15386	AK020304|Defb41|77673|defensin beta 41	DQ012027|Defb41|77673|defensin beta 41	NM_183124|Defb41|77673|defensin beta 41
mm9_v1_chr3_+_41368846_41368849	1.3968	FOX{I1,J2}.p2	AK129445|Phf17|269424|PHD finger protein 17
mm9_v1_chr4_+_143379236_143379267	1.39486	FOX{I1,J2}.p2	NM_001007077|Gm13023|194227|predicted gene 13023	AK135972|Gm13023|194227|predicted gene 13023	BC084594|Gm13023|194227|predicted gene 13023
mm9_v1_chr6_-_128738499_128738658	1.39268	FOX{I1,J2}.p2	DQ237929|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	X64720|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	S43141|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	AF354263|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	M77678|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	BC061168|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	AK079743|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	NM_001159904|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C	NM_008527|Klrb1c|17059|killer cell lectin-like receptor subfamily B member 1C
mm9_v1_chr10_-_33764102_33764118	1.39226	FOX{I1,J2}.p2	AK028763|Fam26d|270711|family with sequence similarity 26, member D	NM_001081165|Fam26d|270711|family with sequence similarity 26, member D
mm9_v1_chr11_+_94426358_94426387	1.38666	FOX{I1,J2}.p2	AK158297|Chad|12643|chondroadherin	NM_007689|Chad|12643|chondroadherin
mm9_v1_chr7_+_35829312_35829421	1.38533	FOX{I1,J2}.p2	AK195445|Pepd|18624|peptidase D	AK197573|Pepd|18624|peptidase D	AK213891|Pepd|18624|peptidase D
mm9_v1_chr14_+_75642093_75642165	1.38369	FOX{I1,J2}.p2	AF164524|Cpb2|56373|carboxypeptidase B2 (plasma)	NM_019775|Cpb2|56373|carboxypeptidase B2 (plasma)	AK004045|Cpb2|56373|carboxypeptidase B2 (plasma)	BC089577|Cpb2|56373|carboxypeptidase B2 (plasma)	AB021968|Cpb2|56373|carboxypeptidase B2 (plasma)	AF186188|Cpb2|56373|carboxypeptidase B2 (plasma)
mm9_v1_chr17_-_26645284_26645349	1.37804	FOX{I1,J2}.p2	AK149915|Dusp1|19252|dual specificity phosphatase 1	AK159726|Dusp1|19252|dual specificity phosphatase 1
mm9_v1_chr3_+_89586320_89586446	1.37762	FOX{I1,J2}.p2	AK211403|Ube2q1|70093|ubiquitin-conjugating enzyme E2Q (putative) 1
mm9_v1_chr2_-_112099427_112099447	1.37531	FOX{I1,J2}.p2	BC125332|BC125332|213765|cDNA sequence BC125332	BC125334|BC125332|213765|cDNA sequence BC125332	AK077049|BC125332|213765|cDNA sequence BC125332	NM_172521|BC125332|213765|cDNA sequence BC125332
mm9_v1_chr5_-_92777875_92777914	1.36746	FOX{I1,J2}.p2	AF227743|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	M33266|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	NM_021274|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	BC030067|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	BC057150|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK150380|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK156907|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK172540|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	M86829|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK144279|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK150765|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151210|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151248|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151415|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151534|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK152568|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK152814|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK153181|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157130|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157139|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157589|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157678|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK146144|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK152234|Cxcl10|15945|chemokine (C-X-C motif) ligand 10
mm9_v1_chrX_-_135619753_135619783	1.36398	FOX{I1,J2}.p2	AK149459|Serpina7|331535|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7	AK050361|Serpina7|331535|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7	NM_177920|Serpina7|331535|serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 7
mm9_v1_chr5_+_115303672_115303722	1.36264	FOX{I1,J2}.p2	AK015857|4930519G04Rik|67593|RIKEN cDNA 4930519G04 gene	AK015843|4930519G04Rik|67593|RIKEN cDNA 4930519G04 gene	NM_026263|4930519G04Rik|67593|RIKEN cDNA 4930519G04 gene
mm9_v1_chr11_-_57981970_57982020	1.36256	FOX{I1,J2}.p2	AK049216|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC137802|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC144921|Gemin5|216766|gem (nuclear organelle) associated protein 5	BC144922|Gemin5|216766|gem (nuclear organelle) associated protein 5	AK143536|Gemin5|216766|gem (nuclear organelle) associated protein 5	AK131137|Gemin5|216766|gem (nuclear organelle) associated protein 5
mm9_v1_chr5_+_104494153_104494232	1.36171	FOX{I1,J2}.p2	
mm9_v1_chr11_-_101087738_101087767	1.3614	FOX{I1,J2}.p2	AK045374|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK138942|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	U60453|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK164192|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK140694|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	NM_007970|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr14_-_31942057_31942124	1.35974	FOX{I1,J2}.p2	AK036279|2010107H07Rik|66487|RIKEN cDNA 2010107H07 gene	AK008341|2010107H07Rik|66487|RIKEN cDNA 2010107H07 gene	AK019298|2010107H07Rik|66487|RIKEN cDNA 2010107H07 gene	AK007443|2010107H07Rik|66487|RIKEN cDNA 2010107H07 gene
mm9_v1_chr3_+_106288967_106288967	1.3594	FOX{I1,J2}.p2	BC008266|Dennd2d|72121|DENN/MADD domain containing 2D	NM_028110|Dennd2d|72121|DENN/MADD domain containing 2D
mm9_v1_chr12_-_102321911_102321936	1.35473	FOX{I1,J2}.p2	AK053668|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	NM_001160214|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)	NM_211355|Smek1|68734|SMEK homolog 1, suppressor of mek1 (Dictyostelium)
mm9_v1_chr16_+_32332294_32332380	1.35393	FOX{I1,J2}.p2	NM_177633|Ubxn7|224111|UBX domain protein 7	AK147730|Ubxn7|224111|UBX domain protein 7	BC062904|Ubxn7|224111|UBX domain protein 7
mm9_v1_chr3_+_65332306_65332400	1.35306	FOX{I1,J2}.p2	AK163347|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK162094|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	U55178|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK028529|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	NM_178892|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK032453|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	AK150248|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase	BC068173|Tiparp|99929|TCDD-inducible poly(ADP-ribose) polymerase
mm9_v1_chr2_-_60591836_60591898	1.35047	FOX{I1,J2}.p2	AK159851|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr11_+_53138176_53138190	1.34892	FOX{I1,J2}.p2	AK010803|Zcchc10|67966|zinc finger, CCHC domain containing 10	AK027985|Zcchc10|67966|zinc finger, CCHC domain containing 10	BC025078|Zcchc10|67966|zinc finger, CCHC domain containing 10	AK020177|Zcchc10|67966|zinc finger, CCHC domain containing 10	AK169856|Zcchc10|67966|zinc finger, CCHC domain containing 10	BC087902|Zcchc10|67966|zinc finger, CCHC domain containing 10	NM_026479|Zcchc10|67966|zinc finger, CCHC domain containing 10
mm9_v1_chr11_+_96184439_96184443	1.34782	FOX{I1,J2}.p2	NM_001079869|Hoxb3|15410|homeobox B3	S35738|Hoxb3|15410|homeobox B3
mm9_v1_chr2_-_35960774_35960927	1.34549	FOX{I1,J2}.p2	AK090339|Lhx6|16874|LIM homeobox protein 6	AJ000337|Lhx6|16874|LIM homeobox protein 6	AK140987|Lhx6|16874|LIM homeobox protein 6	NM_001083125|Lhx6|16874|LIM homeobox protein 6	NM_008500|Lhx6|16874|LIM homeobox protein 6
mm9_v1_chr15_+_10153734_10153771	1.34444	FOX{I1,J2}.p2	M22957|Prlr|19116|prolactin receptor	M22959|Prlr|19116|prolactin receptor	AK052679|Prlr|19116|prolactin receptor
mm9_v1_chr8_-_75090050_75090196	1.34252	FOX{I1,J2}.p2	AK215124|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK217818|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene	AK207517|9130011J15Rik|66818|RIKEN cDNA 9130011J15 gene
mm9_v1_chr10_-_61441817_61441832	1.34063	FOX{I1,J2}.p2	BC034164|Col13a1|12817|collagen, type XIII, alpha 1
mm9_v1_chrX_-_35065833_35065833	1.33822	FOX{I1,J2}.p2	AJ972671|Rhox4g|664608|reproductive homeobox 4G	NM_001039698|Rhox4g|664608|reproductive homeobox 4G
mm9_v1_chr18_+_32056465_32056564	1.337	FOX{I1,J2}.p2	BC003939|Wdr33|74320|WD repeat domain 33
mm9_v1_chr10_+_10869224_10869321	1.33685	FOX{I1,J2}.p2	AK082160|Shprh|268281|SNF2 histone linker PHD RING helicase	AK053448|Shprh|268281|SNF2 histone linker PHD RING helicase	NM_001077707|Shprh|268281|SNF2 histone linker PHD RING helicase	NM_172937|Shprh|268281|SNF2 histone linker PHD RING helicase	BC055003|Shprh|268281|SNF2 histone linker PHD RING helicase	AK048265|Shprh|268281|SNF2 histone linker PHD RING helicase	AK085285|Shprh|268281|SNF2 histone linker PHD RING helicase	AK011809|Shprh|268281|SNF2 histone linker PHD RING helicase	AY162264|Shprh|268281|SNF2 histone linker PHD RING helicase	AY162266|Shprh|268281|SNF2 histone linker PHD RING helicase
mm9_v1_chr10_+_11001384_11001384	1.33527	FOX{I1,J2}.p2	AK006369|Fbxo30|71865|F-box protein 30	NM_001168297|Fbxo30|71865|F-box protein 30
mm9_v1_chr11_+_98667577_98667599	1.33505	FOX{I1,J2}.p2	AK031902|Msl1|74026|male-specific lethal 1 homolog (Drosophila)
mm9_v1_chr11_+_20991321_20991416	1.3342	FOX{I1,J2}.p2	AK151660|Peli1|67245|pellino 1	AK152900|Peli1|67245|pellino 1	AK152997|Peli1|67245|pellino 1	AK153372|Peli1|67245|pellino 1	NM_023324|Peli1|67245|pellino 1	AK167525|Peli1|67245|pellino 1	BC026695|Peli1|67245|pellino 1
mm9_v1_chr5_+_130663030_130663049	1.33399	FOX{I1,J2}.p2	AK044568|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1	BC018229|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1	NM_019983|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr4_-_118993081_118993127	1.3338	FOX{I1,J2}.p2	BC050116|Ppih|66101|peptidyl prolyl isomerase H	BC016565|Ppih|66101|peptidyl prolyl isomerase H	BC098490|Ppih|66101|peptidyl prolyl isomerase H	AK136330|Ppih|66101|peptidyl prolyl isomerase H	AK005202|Ppih|66101|peptidyl prolyl isomerase H	AK014665|Ppih|66101|peptidyl prolyl isomerase H	AK164299|Ppih|66101|peptidyl prolyl isomerase H	AK003179|Ppih|66101|peptidyl prolyl isomerase H	AK008394|Ppih|66101|peptidyl prolyl isomerase H	AK134995|Ppih|66101|peptidyl prolyl isomerase H	NM_001110129|Ppih|66101|peptidyl prolyl isomerase H	NM_001110130|Ppih|66101|peptidyl prolyl isomerase H	NM_028677|Ppih|66101|peptidyl prolyl isomerase H
mm9_v1_chr17_-_35971652_35971809	1.33338	FOX{I1,J2}.p2	AK080778|Tubb5|22154|tubulin, beta 5	AK088137|Tubb5|22154|tubulin, beta 5
mm9_v1_chr18_+_67934517_67934670	1.33053	FOX{I1,J2}.p2	AK143727|Seh1l|72124|SEH1-like (S. cerevisiae	NM_001039088|Seh1l|72124|SEH1-like (S. cerevisiae	NM_028112|Seh1l|72124|SEH1-like (S. cerevisiae	AK170591|Seh1l|72124|SEH1-like (S. cerevisiae	BC027244|Seh1l|72124|SEH1-like (S. cerevisiae	AK011330|Seh1l|72124|SEH1-like (S. cerevisiae	AK169231|Seh1l|72124|SEH1-like (S. cerevisiae	AK169388|Seh1l|72124|SEH1-like (S. cerevisiae	AK088835|Seh1l|72124|SEH1-like (S. cerevisiae	AK166573|Seh1l|72124|SEH1-like (S. cerevisiae
mm9_v1_chr2_-_104582953_104582979	1.3241	FOX{I1,J2}.p2	BC013499|Depdc7|211896|DEP domain containing 7	NM_144804|Depdc7|211896|DEP domain containing 7	AK144066|Depdc7|211896|DEP domain containing 7	AK165504|Depdc7|211896|DEP domain containing 7	AK134830|Depdc7|211896|DEP domain containing 7	AK162086|Depdc7|211896|DEP domain containing 7	AK162218|Depdc7|211896|DEP domain containing 7
mm9_v1_chr3_+_95733480_95733504	1.32008	FOX{I1,J2}.p2	AB037685|Anp32e|66471|acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
mm9_v1_chr7_+_119253816_119253899	1.31935	FOX{I1,J2}.p2	AK015683|Usp47|74996|ubiquitin specific peptidase 47
mm9_v1_chr9_-_113563906_113564041	1.31743	FOX{I1,J2}.p2	AK199870|Pdcd6ip|18571|programmed cell death 6 interacting protein
mm9_v1_chr10_+_127691166_127691233	1.31725	FOX{I1,J2}.p2	NM_133996|Apon|28194|apolipoprotein N	AK083289|Apon|28194|apolipoprotein N
mm9_v1_chr15_-_101648565_101648599	1.31518	FOX{I1,J2}.p2	BC120485|Krt2|16681|keratin 2	BC139485|Krt2|16681|keratin 2	X74784|Krt2|16681|keratin 2	AK161078|Krt2|16681|keratin 2	AK132476|Krt2|16681|keratin 2	AK161098|Krt2|16681|keratin 2	NM_010668|Krt2|16681|keratin 2
mm9_v1_chr12_+_111724001_111724119	1.31444	FOX{I1,J2}.p2	AB055635|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AB055636|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	U37353|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr5_+_96385940_96385969	1.314	FOX{I1,J2}.p2	AK160241|Cxcl13|55985|chemokine (C-X-C motif) ligand 13	AK156025|Cxcl13|55985|chemokine (C-X-C motif) ligand 13	AF044196|Cxcl13|55985|chemokine (C-X-C motif) ligand 13	NM_018866|Cxcl13|55985|chemokine (C-X-C motif) ligand 13	AF030636|Cxcl13|55985|chemokine (C-X-C motif) ligand 13	BC012965|Cxcl13|55985|chemokine (C-X-C motif) ligand 13
mm9_v1_chr14_+_66424675_66424787	1.31349	FOX{I1,J2}.p2	AK076121|Pbk|52033|PDZ binding kinase	BC020099|Pbk|52033|PDZ binding kinase	AB041882|Pbk|52033|PDZ binding kinase	NM_023209|Pbk|52033|PDZ binding kinase	AK003838|Pbk|52033|PDZ binding kinase
mm9_v1_chr14_-_66452720_66452805	1.31315	FOX{I1,J2}.p2	BC033303|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	BC071275|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	AK166457|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	AK050845|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	AK144685|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)	NM_028039|Esco2|71988|establishment of cohesion 1 homolog 2 (S. cerevisiae)
mm9_v1_chr9_+_50583388_50583453	1.31296	FOX{I1,J2}.p2	AK086674|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	AK050335|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	AK149592|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	AK054293|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	BC021791|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	NM_133981|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)
mm9_v1_chr5_-_52957343_52957374	1.30848	FOX{I1,J2}.p2	AY841361|Lgi2|246316|leucine-rich repeat LGI family, member 2
mm9_v1_chr2_-_118375365_118375421	1.30843	FOX{I1,J2}.p2	AK040622|Bmf|171543|BCL2 modifying factor	AK169903|Bmf|171543|BCL2 modifying factor	NM_138313|Bmf|171543|BCL2 modifying factor	AK084658|Bmf|171543|BCL2 modifying factor
mm9_v1_chr9_-_85637765_85637765	1.30715	FOX{I1,J2}.p2	NM_001081282|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase
mm9_v1_chr4_-_126114651_126114748	1.30614	FOX{I1,J2}.p2	AK141219|Eif2c1|236511|eukaryotic translation initiation factor 2C, 1
mm9_v1_chr6_-_87800966_87801099	1.30528	FOX{I1,J2}.p2	AK078427|Cnbp|12785|cellular nucleic acid binding protein	L12693|Cnbp|12785|cellular nucleic acid binding protein	X63866|Cnbp|12785|cellular nucleic acid binding protein	Z11870|Cnbp|12785|cellular nucleic acid binding protein	Z11871|Cnbp|12785|cellular nucleic acid binding protein	BC058723|Cnbp|12785|cellular nucleic acid binding protein	U20326|Cnbp|12785|cellular nucleic acid binding protein	AK151528|Cnbp|12785|cellular nucleic acid binding protein	AK146593|Cnbp|12785|cellular nucleic acid binding protein	AK159810|Cnbp|12785|cellular nucleic acid binding protein	AK153414|Cnbp|12785|cellular nucleic acid binding protein	AK147157|Cnbp|12785|cellular nucleic acid binding protein	AK146367|Cnbp|12785|cellular nucleic acid binding protein	AK145444|Cnbp|12785|cellular nucleic acid binding protein	AK146224|Cnbp|12785|cellular nucleic acid binding protein	AK151961|Cnbp|12785|cellular nucleic acid binding protein	AK146301|Cnbp|12785|cellular nucleic acid binding protein	AK146344|Cnbp|12785|cellular nucleic acid binding protein	AK151317|Cnbp|12785|cellular nucleic acid binding protein	AK144740|Cnbp|12785|cellular nucleic acid binding protein	AK075760|Cnbp|12785|cellular nucleic acid binding protein	NM_001109745|Cnbp|12785|cellular nucleic acid binding protein	NM_001109746|Cnbp|12785|cellular nucleic acid binding protein	NM_013493|Cnbp|12785|cellular nucleic acid binding protein
mm9_v1_chr13_+_3477477_3477548	1.30506	FOX{I1,J2}.p2	AK084238|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK013191|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK034854|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK087718|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK043092|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK031301|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK043278|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene
mm9_v1_chr10_+_127669118_127669147	1.30328	FOX{I1,J2}.p2	BC052884|Timeless|21853|timeless homolog (Drosophila)	NM_001136082|Timeless|21853|timeless homolog (Drosophila)	NM_001164080|Timeless|21853|timeless homolog (Drosophila)	NM_001164081|Timeless|21853|timeless homolog (Drosophila)	AK162012|Timeless|21853|timeless homolog (Drosophila)	AK153838|Timeless|21853|timeless homolog (Drosophila)	BC064788|Timeless|21853|timeless homolog (Drosophila)	AB019001|Timeless|21853|timeless homolog (Drosophila)	AF071506|Timeless|21853|timeless homolog (Drosophila)
mm9_v1_chr3_-_88717730_88717876	1.30055	FOX{I1,J2}.p2	AK163280|Msto1|229524|misato homolog 1 (Drosophila)	BC108354|Msto1|229524|misato homolog 1 (Drosophila)	AK167586|Msto1|229524|misato homolog 1 (Drosophila)	BC008103|Msto1|229524|misato homolog 1 (Drosophila)	AK166834|Msto1|229524|misato homolog 1 (Drosophila)	AK166236|Msto1|229524|misato homolog 1 (Drosophila)	AK170160|Msto1|229524|misato homolog 1 (Drosophila)	AK139708|Msto1|229524|misato homolog 1 (Drosophila)	NM_144898|Msto1|229524|misato homolog 1 (Drosophila)
mm9_v1_chr7_+_17659388_17659431	1.3001	FOX{I1,J2}.p2	BC030357|Psg16|26436|pregnancy specific glycoprotein 16	NM_007676|Psg16|26436|pregnancy specific glycoprotein 16	U34272|Psg16|26436|pregnancy specific glycoprotein 16
mm9_v1_chr19_-_41068625_41068698	1.29966	FOX{I1,J2}.p2	AJ222814|Blnk|17060|B-cell linker	AK172016|Blnk|17060|B-cell linker	BC059785|Blnk|17060|B-cell linker	AK089704|Blnk|17060|B-cell linker	AF068182|Blnk|17060|B-cell linker	AB015290|Blnk|17060|B-cell linker
mm9_v1_chr3_+_81736518_81736645	1.29884	FOX{I1,J2}.p2	AK143683|Ctso|229445|cathepsin O	AK034490|Ctso|229445|cathepsin O	NM_177662|Ctso|229445|cathepsin O	AK020735|Ctso|229445|cathepsin O	AK040071|Ctso|229445|cathepsin O	AK049470|Ctso|229445|cathepsin O	AK166103|Ctso|229445|cathepsin O	BC098219|Ctso|229445|cathepsin O	AK165930|Ctso|229445|cathepsin O	BC044664|Ctso|229445|cathepsin O
mm9_v1_chr10_-_30338152_30338232	1.29744	FOX{I1,J2}.p2	AK027974|Hint3|66847|histidine triad nucleotide binding protein 3	BC025065|Hint3|66847|histidine triad nucleotide binding protein 3	NM_025798|Hint3|66847|histidine triad nucleotide binding protein 3	AY040768|Hint3|66847|histidine triad nucleotide binding protein 3	AK007758|Hint3|66847|histidine triad nucleotide binding protein 3
mm9_v1_chr11_-_54769546_54769594	1.29606	FOX{I1,J2}.p2	BC008186|Tnip1|57783|TNFAIP3 interacting protein 1
mm9_v1_chr15_-_77277889_77277889	1.29581	FOX{I1,J2}.p2	BC085284|Apol7b|278679|apolipoprotein L 7b	NM_001024848|Apol7b|278679|apolipoprotein L 7b
mm9_v1_chr2_+_155782193_155782305	1.29392	FOX{I1,J2}.p2	AK161443|Cep250|16328|centrosomal protein 250	AK145562|Cep250|16328|centrosomal protein 250	NM_001129999|Cep250|16328|centrosomal protein 250	NM_001130000|Cep250|16328|centrosomal protein 250	NM_008383|Cep250|16328|centrosomal protein 250	NM_177217|Cep250|16328|centrosomal protein 250	BC068153|Cep250|16328|centrosomal protein 250
mm9_v1_chr9_-_95758738_95758738	1.29027	FOX{I1,J2}.p2	BC053441|1700065D16Rik|73410|RIKEN cDNA 1700065D16 gene	NM_028533|1700065D16Rik|73410|RIKEN cDNA 1700065D16 gene
mm9_v1_chr11_+_72609717_72609729	1.28832	FOX{I1,J2}.p2	AK158924|Zzef1|195018|zinc finger, ZZ-type with EF hand domain 1	NM_001045536|Zzef1|195018|zinc finger, ZZ-type with EF hand domain 1
mm9_v1_chr11_-_43650152_43650304	1.2877	FOX{I1,J2}.p2	Y12738|Adra1b|11548|adrenergic receptor, alpha 1b
mm9_v1_chr4_+_109015660_109015680	1.28406	FOX{I1,J2}.p2	NM_001159964|Eps15|13858|epidermal growth factor receptor pathway substrate 15	AK083176|Eps15|13858|epidermal growth factor receptor pathway substrate 15
mm9_v1_chr9_+_98197280_98197292	1.28192	FOX{I1,J2}.p2	BC092086|Nmnat3|74080|nicotinamide nucleotide adenylyltransferase 3
mm9_v1_chr9_-_35651734_35651734	1.28121	FOX{I1,J2}.p2	AK020329|9230110F15Rik|77080|RIKEN cDNA 9230110F15 gene	NM_029863|9230110F15Rik|77080|RIKEN cDNA 9230110F15 gene
mm9_v1_chr10_+_53057491_53057558	1.28028	FOX{I1,J2}.p2	NM_001141927|Pln|18821|phospholamban	NM_023129|Pln|18821|phospholamban	BC061097|Pln|18821|phospholamban	AK002622|Pln|18821|phospholamban	AK040718|Pln|18821|phospholamban	S46792|Pln|18821|phospholamban	AK142708|Pln|18821|phospholamban	AK052199|Pln|18821|phospholamban
mm9_v1_chr17_+_72022808_72022818	1.27929	FOX{I1,J2}.p2	AK158647|Fam179a|320159|family with sequence similarity 179, member A
mm9_v1_chr12_-_76815494_76815519	1.27868	FOX{I1,J2}.p2	
mm9_v1_chr1_-_184246785_184246786	1.27648	FOX{I1,J2}.p2	AK028774|Fbxo28|67948|F-box protein 28
mm9_v1_chr9_-_119932620_119932715	1.27542	FOX{I1,J2}.p2	BC117959|Xirp1|22437|xin actin-binding repeat containing 1	BC117960|Xirp1|22437|xin actin-binding repeat containing 1	AF051945|Xirp1|22437|xin actin-binding repeat containing 1	NM_011724|Xirp1|22437|xin actin-binding repeat containing 1
mm9_v1_chr17_-_45570469_45570504	1.27177	FOX{I1,J2}.p2	BC003893|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK150562|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK150861|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK146892|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK172950|Cdc5l|71702|cell division cycle 5-like (S. pombe)
mm9_v1_chr11_-_75161767_75161884	1.27087	FOX{I1,J2}.p2	AK177196|Rpa1|68275|replication protein A1	AK197958|Rpa1|68275|replication protein A1	AK203654|Rpa1|68275|replication protein A1	AK167598|Rpa1|68275|replication protein A1	AK150785|Rpa1|68275|replication protein A1	AK165316|Rpa1|68275|replication protein A1	BC019119|Rpa1|68275|replication protein A1	AK035084|Rpa1|68275|replication protein A1	AK152296|Rpa1|68275|replication protein A1	AK153107|Rpa1|68275|replication protein A1	AK165944|Rpa1|68275|replication protein A1	AK169599|Rpa1|68275|replication protein A1	AK148035|Rpa1|68275|replication protein A1	AK168400|Rpa1|68275|replication protein A1	AK151590|Rpa1|68275|replication protein A1	AK153144|Rpa1|68275|replication protein A1	NM_001164223|Rpa1|68275|replication protein A1	NM_026653|Rpa1|68275|replication protein A1
mm9_v1_chrX_+_20374922_20374939	1.27083	FOX{I1,J2}.p2	AK034861|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr4_+_53024724_53024848	1.26727	FOX{I1,J2}.p2	AK012480|Nipsnap3b|66536|nipsnap homolog 3B (C. elegans)	NM_025623|Nipsnap3b|66536|nipsnap homolog 3B (C. elegans)	AK004458|Nipsnap3b|66536|nipsnap homolog 3B (C. elegans)	AK008786|Nipsnap3b|66536|nipsnap homolog 3B (C. elegans)	AF353623|Nipsnap3b|66536|nipsnap homolog 3B (C. elegans)	BC019505|Nipsnap3b|66536|nipsnap homolog 3B (C. elegans)
mm9_v1_chr11_+_3863948_3864033	1.26707	FOX{I1,J2}.p2	AK029075|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	NM_022889|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	BC004844|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	BC011142|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AK088831|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AF289539|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AK220142|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)
mm9_v1_chr7_-_20506379_20506493	1.26689	FOX{I1,J2}.p2	AJ563420|Pvr|52118|poliovirus receptor	BC138219|Pvr|52118|poliovirus receptor	BC138220|Pvr|52118|poliovirus receptor	BC032283|Pvr|52118|poliovirus receptor	AB195430|Pvr|52118|poliovirus receptor	BC013673|Pvr|52118|poliovirus receptor	AK078344|Pvr|52118|poliovirus receptor	AK014446|Pvr|52118|poliovirus receptor	AK038747|Pvr|52118|poliovirus receptor	AK080753|Pvr|52118|poliovirus receptor	AK165873|Pvr|52118|poliovirus receptor	NM_027514|Pvr|52118|poliovirus receptor
mm9_v1_chr7_+_148274044_148274095	1.26515	FOX{I1,J2}.p2	AK154376|Pkp3|56460|plakophilin 3
mm9_v1_chr9_-_82869034_82869071	1.26051	FOX{I1,J2}.p2	BC022102|Phip|83946|pleckstrin homology domain interacting protein	BC039765|Phip|83946|pleckstrin homology domain interacting protein	AK050025|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr11_+_46337752_46337752	1.25867	FOX{I1,J2}.p2	NM_001163357|Gm12169|210535|predicted gene 12169
mm9_v1_chr14_-_73762324_73762328	1.25754	FOX{I1,J2}.p2	AK010248|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr7_+_26846512_26846528	1.25634	FOX{I1,J2}.p2	NM_007813|Cyp2b13|13089|cytochrome P450, family 2, subfamily b, polypeptide 13	BC145895|Cyp2b13|13089|cytochrome P450, family 2, subfamily b, polypeptide 13
mm9_v1_chr4_+_89885510_89885510	1.25256	FOX{I1,J2}.p2	AF290196|Zfp352|236537|zinc finger protein 352	NM_153102|Zfp352|236537|zinc finger protein 352
mm9_v1_chr5_-_72692122_72692149	1.25032	FOX{I1,J2}.p2	AK005572|Corin|53419|corin
mm9_v1_chr7_-_111291762_111291785	1.24703	FOX{I1,J2}.p2	BC100419|Ubqln3|244178|ubiquilin 3	AK077072|Ubqln3|244178|ubiquilin 3	NM_198623|Ubqln3|244178|ubiquilin 3
mm9_v1_chr4_-_61100653_61100734	1.24572	FOX{I1,J2}.p2	NM_001045550|Mup2|17841|major urinary protein 2	NM_008647|Mup2|17841|major urinary protein 2
mm9_v1_chrX_-_101866402_101866402	1.24055	FOX{I1,J2}.p2	AK132304|Zdhhc15|108672|zinc finger, DHHC domain containing 15	NM_175358|Zdhhc15|108672|zinc finger, DHHC domain containing 15
mm9_v1_chr10_+_40199817_40199881	1.24018	FOX{I1,J2}.p2	AK030146|Cdk19|78334|cyclin-dependent kinase 19
mm9_v1_chr3_-_93480189_93480204	1.23865	FOX{I1,J2}.p2	AF290198|Tdpoz1|207213|TD and POZ domain containing 1	NM_148949|Tdpoz1|207213|TD and POZ domain containing 1
mm9_v1_chr1_-_183112962_183112965	1.2366	FOX{I1,J2}.p2	AK167017|Wdr26|226757|WD repeat domain 26	AK167116|Wdr26|226757|WD repeat domain 26
mm9_v1_chr2_-_140215417_140215459	1.23656	FOX{I1,J2}.p2	BC150948|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK131753|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK132650|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)	NM_001033296|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)	AK016809|Sel1l2|228684|sel-1 suppressor of lin-12-like 2 (C. elegans)
mm9_v1_chr2_+_17976897_17976897	1.23517	FOX{I1,J2}.p2	BC070475|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	NM_010804|Mllt10|17354|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
mm9_v1_chr1_+_58768329_58768403	1.23507	FOX{I1,J2}.p2	AK009498|Cflar|12633|CASP8 and FADD-like apoptosis regulator	AK152515|Cflar|12633|CASP8 and FADD-like apoptosis regulator	U97076|Cflar|12633|CASP8 and FADD-like apoptosis regulator
mm9_v1_chr3_-_87734096_87734116	1.23412	FOX{I1,J2}.p2	NM_153562|Rrnad1|229503|ribosomal RNA adenine dimethylase domain containing 1
mm9_v1_chr9_+_110666191_110666214	1.23368	FOX{I1,J2}.p2	AK011518|Myl3|17897|myosin, light polypeptide 3
mm9_v1_chr1_+_15795704_15795751	1.23252	FOX{I1,J2}.p2	AK036615|Terf1|21749|telomeric repeat binding factor 1	AK021235|Terf1|21749|telomeric repeat binding factor 1	BC034866|Terf1|21749|telomeric repeat binding factor 1	NM_009352|Terf1|21749|telomeric repeat binding factor 1	AK132022|Terf1|21749|telomeric repeat binding factor 1	AB109563|Terf1|21749|telomeric repeat binding factor 1	U65586|Terf1|21749|telomeric repeat binding factor 1
mm9_v1_chr18_+_44264117_44264290	1.23249	FOX{I1,J2}.p2	DQ437332|Spink12|78242|serine peptidase inhibitor, Kazal type 11	AK136616|Spink12|78242|serine peptidase inhibitor, Kazal type 11	NM_030061|Spink12|78242|serine peptidase inhibitor, Kazal type 11	AK020352|Spink12|78242|serine peptidase inhibitor, Kazal type 11	BC145914|Spink12|78242|serine peptidase inhibitor, Kazal type 11	BC145916|Spink12|78242|serine peptidase inhibitor, Kazal type 11
mm9_v1_chr4_-_6381384_6381409	1.23241	FOX{I1,J2}.p2	BC066075|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	BC082810|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	AK049887|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	AF013632|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor
mm9_v1_chr4_-_40186722_40186871	1.22937	FOX{I1,J2}.p2	BC127163|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC152540|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AY553221|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AK052871|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC106095|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AK078287|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AK155930|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AK128929|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	BC027369|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	AK087261|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	NM_172689|Ddx58|230073|DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
mm9_v1_chr7_-_126666995_126666995	1.22835	FOX{I1,J2}.p2	AK005692|Pdilt|71830|protein disulfide isomerase-like, testis expressed	NM_027943|Pdilt|71830|protein disulfide isomerase-like, testis expressed
mm9_v1_chr11_+_99740500_99740500	1.22822	FOX{I1,J2}.p2	AK003994|Gm11567|670533|predicted gene 11567	NM_001101613|Gm11567|670533|predicted gene 11567
mm9_v1_chr18_+_75160121_75160211	1.22808	FOX{I1,J2}.p2	NM_001002239|Rpl17|319195|ribosomal protein L17	BC091759|Rpl17|319195|ribosomal protein L17	AK088443|Rpl17|319195|ribosomal protein L17	AK002770|Rpl17|319195|ribosomal protein L17	AK011132|Rpl17|319195|ribosomal protein L17	AK011133|Rpl17|319195|ribosomal protein L17	AK137077|Rpl17|319195|ribosomal protein L17	BC090990|Rpl17|319195|ribosomal protein L17
mm9_v1_chr2_-_25671355_25671362	1.22761	FOX{I1,J2}.p2	BC111823|Glt6d1|71103|glycosyltransferase 6 domain containing 1	NM_001039095|Glt6d1|71103|glycosyltransferase 6 domain containing 1	AK016765|Glt6d1|71103|glycosyltransferase 6 domain containing 1
mm9_v1_chrX_-_92673432_92673467	1.22492	FOX{I1,J2}.p2	BC107257|Asb12|70392|ankyrin repeat and SOCS box-containing 12	AF403040|Asb12|70392|ankyrin repeat and SOCS box-containing 12	AK009644|Asb12|70392|ankyrin repeat and SOCS box-containing 12	NM_080858|Asb12|70392|ankyrin repeat and SOCS box-containing 12
mm9_v1_chrX_+_53389748_53389754	1.22399	FOX{I1,J2}.p2	AK014416|3830403N18Rik|70691|RIKEN cDNA 3830403N18 gene	NM_027510|3830403N18Rik|70691|RIKEN cDNA 3830403N18 gene	AK014417|3830403N18Rik|70691|RIKEN cDNA 3830403N18 gene
mm9_v1_chr3_+_53267715_53267853	1.22197	FOX{I1,J2}.p2	AK087909|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK038404|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	NM_173382|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK012908|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene	AK161440|2810046L04Rik|212127|RIKEN cDNA 2810046L04 gene
mm9_v1_chr1_+_133585301_133585317	1.2216	FOX{I1,J2}.p2	AK079999|5430435G22Rik|226421|RIKEN cDNA 5430435G22 gene
mm9_v1_chr4_-_144028600_144028674	1.22025	FOX{I1,J2}.p2	BC116372|1700012P22Rik|69364|RIKEN cDNA 1700012P22 gene	BC126971|1700012P22Rik|69364|RIKEN cDNA 1700012P22 gene	AK005933|1700012P22Rik|69364|RIKEN cDNA 1700012P22 gene	BC099569|1700012P22Rik|69364|RIKEN cDNA 1700012P22 gene	NM_027056|1700012P22Rik|69364|RIKEN cDNA 1700012P22 gene
mm9_v1_chr9_-_37519864_37519864	1.21825	FOX{I1,J2}.p2	BC130240|Olfr160|80706|olfactory receptor 160	NM_030553|Olfr160|80706|olfactory receptor 160
mm9_v1_chr10_+_126437764_126437859	1.21629	FOX{I1,J2}.p2	NM_009635|Avil|11567|advillin	AF059486|Avil|11567|advillin	AK154851|Avil|11567|advillin	AK155900|Avil|11567|advillin	AK170878|Avil|11567|advillin	AK171324|Avil|11567|advillin	AK171319|Avil|11567|advillin	AF041448|Avil|11567|advillin	BC119222|Avil|11567|advillin	BC120545|Avil|11567|advillin
mm9_v1_chr12_+_33832641_33832680	1.21604	FOX{I1,J2}.p2	AK013145|Atxn7l1|380753|ataxin 7-like 1	BC100598|Atxn7l1|380753|ataxin 7-like 1	BC017546|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr14_+_26761977_26762068	1.21482	FOX{I1,J2}.p2	DQ224405|Cphx|105594|cytoplasmic polyadenylated homeobox	AK049114|Cphx|105594|cytoplasmic polyadenylated homeobox	NM_175342|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132038|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132040|Cphx|105594|cytoplasmic polyadenylated homeobox	BC095973|Cphx|105594|cytoplasmic polyadenylated homeobox
mm9_v1_chr14_+_26901730_26901821	1.21482	FOX{I1,J2}.p2	DQ224405|Cphx|105594|cytoplasmic polyadenylated homeobox	AK049114|Cphx|105594|cytoplasmic polyadenylated homeobox	NM_175342|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132038|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132040|Cphx|105594|cytoplasmic polyadenylated homeobox	BC095973|Cphx|105594|cytoplasmic polyadenylated homeobox
mm9_v1_chr14_+_27041341_27041432	1.21482	FOX{I1,J2}.p2	DQ224405|Cphx|105594|cytoplasmic polyadenylated homeobox	AK049114|Cphx|105594|cytoplasmic polyadenylated homeobox	NM_175342|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132038|Cphx|105594|cytoplasmic polyadenylated homeobox	BC132040|Cphx|105594|cytoplasmic polyadenylated homeobox	BC095973|Cphx|105594|cytoplasmic polyadenylated homeobox
mm9_v1_chr19_+_43827602_43827629	1.2145	FOX{I1,J2}.p2	BC026775|Cutc|66388|cutC copper transporter homolog (E.coli)
mm9_v1_chr14_+_79851641_79851647	1.21413	FOX{I1,J2}.p2	AK159684|Gm5465|432879|predicted gene 5465	NM_001034882|Gm5465|432879|predicted gene 5465	AK163295|Gm5465|432879|predicted gene 5465
mm9_v1_chrX_-_35022192_35022192	1.21408	FOX{I1,J2}.p2	AJ972670|Rhox4f|636177|reproductive homeobox 4F	NM_001039696|Rhox4f|636177|reproductive homeobox 4F
mm9_v1_chr14_+_28051224_28051247	1.21371	FOX{I1,J2}.p2	AK004600|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	NM_027871|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	AK036737|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3	AK036749|Arhgef3|71704|Rho guanine nucleotide exchange factor (GEF) 3
mm9_v1_chr2_+_30271577_30271577	1.213	FOX{I1,J2}.p2	AK150029|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr2_-_104689616_104690006	1.21218	FOX{I1,J2}.p2	AK166405|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC115470|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK035530|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC099390|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK037087|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151011|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	BC151019|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	AK038703|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	NM_178695|Prrg4|228413|proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)
mm9_v1_chr9_-_110848570_110848661	1.21177	FOX{I1,J2}.p2	M87321|Tdgf1|21667|teratocarcinoma-derived growth factor 1	BC052646|Tdgf1|21667|teratocarcinoma-derived growth factor 1	AK133730|Tdgf1|21667|teratocarcinoma-derived growth factor 1	AK163969|Tdgf1|21667|teratocarcinoma-derived growth factor 1	NM_011562|Tdgf1|21667|teratocarcinoma-derived growth factor 1
mm9_v1_chr3_+_95697820_95698061	1.21138	FOX{I1,J2}.p2	AK148400|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC057865|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	AK152334|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC012406|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	NM_146104|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	BC024111|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)	NM_146134|Aph1a|226548|anterior pharynx defective 1a homolog (C. elegans)
mm9_v1_chr3_-_103546233_103546253	1.21047	FOX{I1,J2}.p2	AK031871|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr10_-_17667872_17667872	1.20973	FOX{I1,J2}.p2	AK132340|Heca|380629|headcase homolog (Drosophila)	NM_001033432|Heca|380629|headcase homolog (Drosophila)
mm9_v1_chr15_+_102839909_102840036	1.20854	FOX{I1,J2}.p2	X16511|Hoxc6|15425|homeobox C6	BC028482|Hoxc6|15425|homeobox C6	NM_010465|Hoxc6|15425|homeobox C6	BC141061|Hoxc6|15425|homeobox C6	AB221685|Hoxc6|15425|homeobox C6
mm9_v1_chr11_+_49064013_49064076	1.20706	FOX{I1,J2}.p2	AK155322|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	AK004760|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	NM_001110150|Mgat1|17308|mannoside acetylglucosaminyltransferase 1
mm9_v1_chr3_+_105916283_105916305	1.20685	FOX{I1,J2}.p2	AK007573|Chia|81600|chitinase, acidic	AK008633|Chia|81600|chitinase, acidic	AK008650|Chia|81600|chitinase, acidic	AK008757|Chia|81600|chitinase, acidic	AK160173|Chia|81600|chitinase, acidic	BC034548|Chia|81600|chitinase, acidic	NM_023186|Chia|81600|chitinase, acidic	AF290003|Chia|81600|chitinase, acidic	DQ349202|Chia|81600|chitinase, acidic	EF094027|Chia|81600|chitinase, acidic	BC011134|Chia|81600|chitinase, acidic	AF154571|Chia|81600|chitinase, acidic
mm9_v1_chr19_-_44144175_44144240	1.20493	FOX{I1,J2}.p2	NM_145502|Erlin1|226144|ER lipid raft associated 1	BC021793|Erlin1|226144|ER lipid raft associated 1	BC011220|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr5_-_46247789_46247790	1.20277	FOX{I1,J2}.p2	AB076078|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	AK042567|Lcorl|209707|ligand dependent nuclear receptor corepressor-like	NM_172153|Lcorl|209707|ligand dependent nuclear receptor corepressor-like
mm9_v1_chr1_+_109486582_109486647	1.2022	FOX{I1,J2}.p2	AK032659|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	NM_001159748|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	NM_011459|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	AK148413|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	U96703|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	BC025121|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	BC011076|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	AK048230|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8	AK036811|Serpinb8|20725|serine (or cysteine) peptidase inhibitor, clade B, member 8
mm9_v1_chr11_-_99712918_99712918	1.20106	FOX{I1,J2}.p2	BC016249|Krtap4-16|435285|keratin associated protein 4-16	NM_001013823|Krtap4-16|435285|keratin associated protein 4-16
mm9_v1_chr8_+_72676676_72676679	1.19853	FOX{I1,J2}.p2	BC045147|Mef2b|17259|myocyte enhancer factor 2B	NM_001045484|Mef2b|17259|myocyte enhancer factor 2B	NM_008578|Mef2b|17259|myocyte enhancer factor 2B	D87833|Mef2b|17259|myocyte enhancer factor 2B	D87834|Mef2b|17259|myocyte enhancer factor 2B	D87835|Mef2b|17259|myocyte enhancer factor 2B	D87836|Mef2b|17259|myocyte enhancer factor 2B
mm9_v1_chrX_-_57400778_57400876	1.19809	FOX{I1,J2}.p2	BC125435|Mcf2|109904|mcf.2 transforming sequence	AB052945|Mcf2|109904|mcf.2 transforming sequence	AB101616|Mcf2|109904|mcf.2 transforming sequence	NM_133197|Mcf2|109904|mcf.2 transforming sequence	AK032122|Mcf2|109904|mcf.2 transforming sequence
mm9_v1_chr6_+_57354359_57354457	1.19745	FOX{I1,J2}.p2	BC125351|Vmn1r19|171200|vomeronasal 1 receptor 19	BC132235|Vmn1r19|171200|vomeronasal 1 receptor 19	NM_134182|Vmn1r19|171200|vomeronasal 1 receptor 19
mm9_v1_chr14_+_70477115_70477343	1.19464	FOX{I1,J2}.p2	AB221656|Egr3|13655|early growth response 3	AF132128|Egr3|13655|early growth response 3	NM_018781|Egr3|13655|early growth response 3	BC100734|Egr3|13655|early growth response 3	BC103570|Egr3|13655|early growth response 3	BC103568|Egr3|13655|early growth response 3	BC103569|Egr3|13655|early growth response 3	S40835|Egr3|13655|early growth response 3
mm9_v1_chr18_+_74442753_74442835	1.19424	FOX{I1,J2}.p2	NM_028948|Ccdc11|74453|coiled-coil domain containing 11	AK016821|Ccdc11|74453|coiled-coil domain containing 11	AK162352|Ccdc11|74453|coiled-coil domain containing 11	BC099500|Ccdc11|74453|coiled-coil domain containing 11
mm9_v1_chr10_-_117229719_117229775	1.19378	FOX{I1,J2}.p2	AK133938|Nup107|103468|nucleoporin 107	BC057591|Nup107|103468|nucleoporin 107	AK088625|Nup107|103468|nucleoporin 107	AK088303|Nup107|103468|nucleoporin 107	BC092261|Nup107|103468|nucleoporin 107	AK043454|Nup107|103468|nucleoporin 107	AK161665|Nup107|103468|nucleoporin 107	AK088069|Nup107|103468|nucleoporin 107	NM_134010|Nup107|103468|nucleoporin 107
mm9_v1_chr17_+_56098521_56098583	1.19198	FOX{I1,J2}.p2	AK168621|Ccdc94|72886|coiled-coil domain containing 94
mm9_v1_chr4_-_132019760_132019840	1.19186	FOX{I1,J2}.p2	BC068306|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)	AK012903|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)	AK012886|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)	NM_026039|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)	AK159696|Med18|67219|mediator of RNA polymerase II transcription, subunit 18 homolog (yeast)
mm9_v1_chr13_-_61304752_61304770	1.1916	FOX{I1,J2}.p2	AF223401|Cts6|58518|cathepsin 6	NM_021445|Cts6|58518|cathepsin 6	BC099455|Cts6|58518|cathepsin 6	AY014781|Cts6|58518|cathepsin 6	AK005518|Cts6|58518|cathepsin 6
mm9_v1_chr8_-_119098475_119098517	1.19084	FOX{I1,J2}.p2	
mm9_v1_chrX_-_100678555_100678592	1.18888	FOX{I1,J2}.p2	L04961|Xist|213742|inactive X specific transcripts	AK002727|Xist|213742|inactive X specific transcripts
mm9_v1_chr15_+_102111950_102112098	1.18693	FOX{I1,J2}.p2	AK178367|Mfsd5|106073|major facilitator superfamily domain containing 5
mm9_v1_chr4_+_88449157_88449157	1.18633	FOX{I1,J2}.p2	NM_001161609|Gm13285|545654|predicted gene 13285	NM_001161610|Gm13287|545655|predicted gene 13287
mm9_v1_chr1_-_4350323_4350394	1.18334	FOX{I1,J2}.p2	BC038794|Rp1|19888|retinitis pigmentosa 1 (human)	BC120927|Rp1|19888|retinitis pigmentosa 1 (human)	BC120928|Rp1|19888|retinitis pigmentosa 1 (human)	AF155141|Rp1|19888|retinitis pigmentosa 1 (human)	AK044413|Rp1|19888|retinitis pigmentosa 1 (human)	BC096607|Rp1|19888|retinitis pigmentosa 1 (human)	NM_011283|Rp1|19888|retinitis pigmentosa 1 (human)
mm9_v1_chr8_+_4613206_4613229	1.18231	FOX{I1,J2}.p2	BC138223|Zfp958|233987|zinc finger protein 958	BC145996|Zfp958|233987|zinc finger protein 958
mm9_v1_chr7_+_28645603_28645637	1.18069	FOX{I1,J2}.p2	AK163602|Zfp607|545938|zinc finger proten 607	NM_001024726|Zfp607|545938|zinc finger proten 607	AK028967|Zfp607|545938|zinc finger proten 607	BC141161|Zfp607|545938|zinc finger proten 607	AK143371|Zfp607|545938|zinc finger proten 607
mm9_v1_chr7_+_54007201_54007213	1.17922	FOX{I1,J2}.p2	M11130|Saa2|20209|serum amyloid A 2	NM_011314|Saa2|20209|serum amyloid A 2	L22190|Saa2|20209|serum amyloid A 2
mm9_v1_chr19_-_39537540_39537568	1.17857	FOX{I1,J2}.p2	AF047725|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38	AK050051|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38	BC150721|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38	NM_010002|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38
mm9_v1_chr17_-_36157472_36157645	1.17766	FOX{I1,J2}.p2	NM_008207|H2-T24|15042|histocompatibility 2, T region locus 24
mm9_v1_chr17_-_56256668_56256720	1.17366	FOX{I1,J2}.p2	AY919875|Plin5|66968|perilipin 5	NM_001077348|Plin5|66968|perilipin 5
mm9_v1_chr4_-_141241630_141241630	1.17042	FOX{I1,J2}.p2	BC150752|Rsc1a1|69994|regulatory solute carrier protein, family 1, member 1	NM_023544|Rsc1a1|69994|regulatory solute carrier protein, family 1, member 1
mm9_v1_chr5_-_115934305_115934492	1.17022	FOX{I1,J2}.p2	AK016400|Sirt4|75387|sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae)	NM_001167691|Sirt4|75387|sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae)	BC022653|Sirt4|75387|sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae)	NM_133760|Sirt4|75387|sirtuin 4 (silent mating type information regulation 2 homolog) 4 (S. cerevisiae)
mm9_v1_chr8_-_8690519_8690552	1.1687	FOX{I1,J2}.p2	BC046971|Arglu1|234023|arginine and glutamate rich 1	NM_176849|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chr10_+_87663839_87663973	1.16841	FOX{I1,J2}.p2	AK013835|Ccdc53|67282|coiled-coil domain containing 53	AK158822|Ccdc53|67282|coiled-coil domain containing 53	NM_001122960|Ccdc53|67282|coiled-coil domain containing 53	NM_026070|Ccdc53|67282|coiled-coil domain containing 53	NM_027487|Ccdc53|67282|coiled-coil domain containing 53	AK017732|Ccdc53|67282|coiled-coil domain containing 53	AK004206|Ccdc53|67282|coiled-coil domain containing 53	AK028599|Ccdc53|67282|coiled-coil domain containing 53	AK009358|Ccdc53|67282|coiled-coil domain containing 53	BC029256|Ccdc53|67282|coiled-coil domain containing 53
mm9_v1_chr9_+_99370839_99370876	1.16791	FOX{I1,J2}.p2	BC068205|1600029I14Rik|69797|RIKEN cDNA 1600029I14 gene	AK005560|1600029I14Rik|69797|RIKEN cDNA 1600029I14 gene
mm9_v1_chr2_+_61416589_61416667	1.16778	FOX{I1,J2}.p2	U59864|Tank|21353|TRAF family member-associated Nf-kappa B activator	NM_011529|Tank|21353|TRAF family member-associated Nf-kappa B activator	BC052685|Tank|21353|TRAF family member-associated Nf-kappa B activator
mm9_v1_chr5_+_130731488_130731494	1.16744	FOX{I1,J2}.p2	AK045279|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)	NM_178897|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
mm9_v1_chr2_-_26284968_26285031	1.16702	FOX{I1,J2}.p2	AK122242|Sec16a|227648|SEC16 homolog A (S. cerevisiae)
mm9_v1_chr7_+_5996762_5996870	1.16485	FOX{I1,J2}.p2	AK133284|Nlrp4c|83564|NLR family, pyrin domain containing 4C	AY596194|Nlrp4c|83564|NLR family, pyrin domain containing 4C	NM_031389|Nlrp4c|83564|NLR family, pyrin domain containing 4C	AK166817|Nlrp4c|83564|NLR family, pyrin domain containing 4C	AK166869|Nlrp4c|83564|NLR family, pyrin domain containing 4C
mm9_v1_chr15_-_98087709_98087737	1.16235	FOX{I1,J2}.p2	AB016273|H1fnt|70069|H1 histone family, member N, testis-specific	BC052363|H1fnt|70069|H1 histone family, member N, testis-specific	AY496853|H1fnt|70069|H1 histone family, member N, testis-specific	NM_027304|H1fnt|70069|H1 histone family, member N, testis-specific
mm9_v1_chr1_+_167693876_167693939	1.16121	FOX{I1,J2}.p2	AK005388|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK010947|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK144101|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AF084524|Creg1|433375|cellular repressor of E1A-stimulated genes 1	BC027426|Creg1|433375|cellular repressor of E1A-stimulated genes 1	NM_011804|Creg1|433375|cellular repressor of E1A-stimulated genes 1	AK150006|Creg1|433375|cellular repressor of E1A-stimulated genes 1
mm9_v1_chr1_-_52874501_52874576	1.16117	FOX{I1,J2}.p2	NM_008384|Inpp1|16329|inositol polyphosphate-1-phosphatase
mm9_v1_chr5_-_65726802_65726885	1.16073	FOX{I1,J2}.p2	U07157|Rfc1|19687|replication factor C (activator 1) 1	X72711|Rfc1|19687|replication factor C (activator 1) 1	BC085174|Rfc1|19687|replication factor C (activator 1) 1	U01222|Rfc1|19687|replication factor C (activator 1) 1	U36441|Rfc1|19687|replication factor C (activator 1) 1	BC085173|Rfc1|19687|replication factor C (activator 1) 1	AK136937|Rfc1|19687|replication factor C (activator 1) 1	AK132028|Rfc1|19687|replication factor C (activator 1) 1	AK146164|Rfc1|19687|replication factor C (activator 1) 1	AK146314|Rfc1|19687|replication factor C (activator 1) 1	NM_011258|Rfc1|19687|replication factor C (activator 1) 1	U15037|Rfc1|19687|replication factor C (activator 1) 1
mm9_v1_chr4_+_140542775_140542957	1.15663	FOX{I1,J2}.p2	AK171554|Atp13a2|74772|ATPase type 13A2	NM_001164366|Atp13a2|74772|ATPase type 13A2	NM_029097|Atp13a2|74772|ATPase type 13A2	AK156104|Atp13a2|74772|ATPase type 13A2	BC023746|Atp13a2|74772|ATPase type 13A2	AK171305|Atp13a2|74772|ATPase type 13A2	BC042661|Atp13a2|74772|ATPase type 13A2	BC025028|Atp13a2|74772|ATPase type 13A2	AK191875|Atp13a2|74772|ATPase type 13A2	AK197341|Atp13a2|74772|ATPase type 13A2	AK204523|Atp13a2|74772|ATPase type 13A2
mm9_v1_chr17_-_35211408_35211444	1.15635	FOX{I1,J2}.p2	AJ315548|Ly6g6d|114654|lymphocyte antigen 6 complex, locus G6D	AJ315549|Ly6g6d|114654|lymphocyte antigen 6 complex, locus G6D	NM_033478|Ly6g6d|114654|lymphocyte antigen 6 complex, locus G6D	BC131988|Ly6g6d|114654|lymphocyte antigen 6 complex, locus G6D	BC131990|Ly6g6d|114654|lymphocyte antigen 6 complex, locus G6D
mm9_v1_chr2_+_91551067_91551117	1.15382	FOX{I1,J2}.p2	AK147045|Harbi1|241547|harbinger transposase derived 1	AK084226|Harbi1|241547|harbinger transposase derived 1	AK080671|Harbi1|241547|harbinger transposase derived 1	BC094315|Harbi1|241547|harbinger transposase derived 1	NM_178724|Harbi1|241547|harbinger transposase derived 1	AK045343|Harbi1|241547|harbinger transposase derived 1
mm9_v1_chrX_-_102265380_102265463	1.15222	FOX{I1,J2}.p2	AK153718|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC019699|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK017459|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085485|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085098|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084980|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC055463|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK080296|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK043766|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK047017|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084653|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK144934|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK157237|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK164650|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene
mm9_v1_chr11_+_46254601_46254700	1.15202	FOX{I1,J2}.p2	AK210054|Med7|66213|mediator complex subunit 7
mm9_v1_chr12_+_56404242_56404258	1.15152	FOX{I1,J2}.p2	AK031144|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene	AK045434|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene
mm9_v1_chr12_+_72212414_72212430	1.14962	FOX{I1,J2}.p2	BC048520|Tomm20l|75266|translocase of outer mitochondrial membrane 20 homolog (yeast)-like	NM_029227|Tomm20l|75266|translocase of outer mitochondrial membrane 20 homolog (yeast)-like	AK016101|Tomm20l|75266|translocase of outer mitochondrial membrane 20 homolog (yeast)-like
mm9_v1_chr7_+_50663608_50663649	1.14898	FOX{I1,J2}.p2	AK156766|Siglecg|243958|sialic acid binding Ig-like lectin G	AK036698|Siglecg|243958|sialic acid binding Ig-like lectin G	BC114981|Siglecg|243958|sialic acid binding Ig-like lectin G	AK042488|Siglecg|243958|sialic acid binding Ig-like lectin G	NM_172900|Siglecg|243958|sialic acid binding Ig-like lectin G
mm9_v1_chr6_+_87054739_87054754	1.14804	FOX{I1,J2}.p2	AK139701|D6Ertd527e|52372|DNA segment, Chr 6, ERATO Doi 527, expressed	NM_001167937|D6Ertd527e|52372|DNA segment, Chr 6, ERATO Doi 527, expressed	NM_001167938|D6Ertd527e|52372|DNA segment, Chr 6, ERATO Doi 527, expressed	AK139822|D6Ertd527e|52372|DNA segment, Chr 6, ERATO Doi 527, expressed	BC157933|D6Ertd527e|52372|DNA segment, Chr 6, ERATO Doi 527, expressed
mm9_v1_chr15_-_76031023_76031036	1.14368	FOX{I1,J2}.p2	AF188015|Plec|18810|plectin	AF188016|Plec|18810|plectin	AY480039|Plec|18810|plectin	NM_201390|Plec|18810|plectin
mm9_v1_chr2_+_124435841_124435850	1.14365	FOX{I1,J2}.p2	AK052232|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chr14_+_56262440_56262456	1.14289	FOX{I1,J2}.p2	
mm9_v1_chr15_-_76181083_76181141	1.14111	FOX{I1,J2}.p2	AK002878|Sharpin|106025|SHANK-associated RH domain interacting protein	AK003578|Sharpin|106025|SHANK-associated RH domain interacting protein	AK053893|Sharpin|106025|SHANK-associated RH domain interacting protein
mm9_v1_chr3_-_36589048_36589088	1.141	FOX{I1,J2}.p2	AK082063|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3	AK080619|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3	AK032317|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3	NM_019510|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3
mm9_v1_chr3_+_27081918_27081998	1.14099	FOX{I1,J2}.p2	AK128968|Nceh1|320024|arylacetamide deacetylase-like 1	AK038691|Nceh1|320024|arylacetamide deacetylase-like 1	AK045363|Nceh1|320024|arylacetamide deacetylase-like 1	AK085767|Nceh1|320024|arylacetamide deacetylase-like 1	NM_178772|Nceh1|320024|arylacetamide deacetylase-like 1	AK135837|Nceh1|320024|arylacetamide deacetylase-like 1	BC082569|Nceh1|320024|arylacetamide deacetylase-like 1	AK173158|Nceh1|320024|arylacetamide deacetylase-like 1	AK034339|Nceh1|320024|arylacetamide deacetylase-like 1
mm9_v1_chr4_+_150294263_150294326	1.13943	FOX{I1,J2}.p2	NM_001077508|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9	NM_011612|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9	AK019885|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9	BC028507|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9
mm9_v1_chr2_-_72817058_72817114	1.13909	FOX{I1,J2}.p2	AK132702|Sp3|20687|trans-acting transcription factor 3
mm9_v1_chr4_+_88446223_88446223	1.13835	FOX{I1,J2}.p2	NM_001161609|Gm13285|545654|predicted gene 13285	NM_001161610|Gm13287|545655|predicted gene 13287
mm9_v1_chr11_+_62366262_62366409	1.13809	FOX{I1,J2}.p2	M81745|Ubb|22187|ubiquitin B
mm9_v1_chr12_+_35669432_35669444	1.13801	FOX{I1,J2}.p2	AK077203|Prps1l1|75456|phosphoribosyl pyrophosphate synthetase 1-like 1	NM_029294|Prps1l1|75456|phosphoribosyl pyrophosphate synthetase 1-like 1	BC109355|Prps1l1|75456|phosphoribosyl pyrophosphate synthetase 1-like 1
mm9_v1_chr12_-_4881150_4881164	1.13647	FOX{I1,J2}.p2	AK157892|Mfsd2b|432628|major facilitator superfamily domain containing 2B	AK162620|Mfsd2b|432628|major facilitator superfamily domain containing 2B	AK171660|Mfsd2b|432628|major facilitator superfamily domain containing 2B	BC145584|Mfsd2b|432628|major facilitator superfamily domain containing 2B	AK156138|Mfsd2b|432628|major facilitator superfamily domain containing 2B	AK133061|Mfsd2b|432628|major facilitator superfamily domain containing 2B	AK172423|Mfsd2b|432628|major facilitator superfamily domain containing 2B	NM_001033488|Mfsd2b|432628|major facilitator superfamily domain containing 2B
mm9_v1_chr9_-_7387992_7388025	1.13437	FOX{I1,J2}.p2	AJ278461|Mmp1b|83996|matrix metallopeptidase 1b (interstitial collagenase)	NM_032007|Mmp1b|83996|matrix metallopeptidase 1b (interstitial collagenase)
mm9_v1_chr2_+_170557306_170557456	1.1334	FOX{I1,J2}.p2	BC066822|Dok5|76829|docking protein 5	NM_001163686|Dok5|76829|docking protein 5	NM_029761|Dok5|76829|docking protein 5	AK044148|Dok5|76829|docking protein 5	AF418208|Dok5|76829|docking protein 5
mm9_v1_chr1_-_171461510_171461594	1.13307	FOX{I1,J2}.p2	AK010351|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK012011|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	BC020026|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK089939|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AF326732|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK044882|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK162249|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	AK132467|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	NM_023284|Nuf2|66977|NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)
mm9_v1_chr11_-_97643677_97643690	1.13291	FOX{I1,J2}.p2	AK168133|Rpl23|65019|ribosomal protein L23	AF287271|Rpl23|65019|ribosomal protein L23	BC025918|Rpl23|65019|ribosomal protein L23	BC081448|Rpl23|65019|ribosomal protein L23
mm9_v1_chr16_+_35938555_35938555	1.13104	FOX{I1,J2}.p2	BC070466|Parp9|80285|poly (ADP-ribose) polymerase family, member 9	NM_030253|Parp9|80285|poly (ADP-ribose) polymerase family, member 9
mm9_v1_chr2_+_127680363_127680363	1.12968	FOX{I1,J2}.p2	AK004775|Acoxl|74121|acyl-Coenzyme A oxidase-like	NM_028765|Acoxl|74121|acyl-Coenzyme A oxidase-like
mm9_v1_chr12_+_107248496_107248578	1.12819	FOX{I1,J2}.p2	AK136352|Vrk1|22367|vaccinia related kinase 1	AK032344|Vrk1|22367|vaccinia related kinase 1	AK166676|Vrk1|22367|vaccinia related kinase 1	AF080253|Vrk1|22367|vaccinia related kinase 1	AK088230|Vrk1|22367|vaccinia related kinase 1
mm9_v1_chr2_+_24200807_24200875	1.12809	FOX{I1,J2}.p2	AK171037|Il1rn|16181|interleukin 1 receptor antagonist	NM_001159562|Il1rn|16181|interleukin 1 receptor antagonist	M64404|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chrY_-_623013_623055	1.12789	FOX{I1,J2}.p2	AK154382|Ddx3y|26900|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	AJ007376|Ddx3y|26900|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	BC051046|Ddx3y|26900|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked	NM_012008|Ddx3y|26900|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
mm9_v1_chr7_+_129210948_129210953	1.12662	FOX{I1,J2}.p2	AK135258|Ubfd1|28018|ubiquitin family domain containing 1	AK140891|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr10_-_75297615_75297625	1.12408	FOX{I1,J2}.p2	AK158939|Gstt2|14872|glutathione S-transferase, theta 2	NM_010361|Gstt2|14872|glutathione S-transferase, theta 2
mm9_v1_chr9_+_56958585_56958640	1.12402	FOX{I1,J2}.p2	AK136972|Sin3a|20466|transcriptional regulator, SIN3A (yeast)
mm9_v1_chr16_-_17722915_17723043	1.12148	FOX{I1,J2}.p2	AF328770|Med15|94112|mediator complex subunit 15	AK131186|Med15|94112|mediator complex subunit 15	AK171628|Med15|94112|mediator complex subunit 15	BC054779|Med15|94112|mediator complex subunit 15	AK166522|Med15|94112|mediator complex subunit 15	AK038915|Med15|94112|mediator complex subunit 15	AK052231|Med15|94112|mediator complex subunit 15	AK142224|Med15|94112|mediator complex subunit 15	NM_001040683|Med15|94112|mediator complex subunit 15	NM_033609|Med15|94112|mediator complex subunit 15	AK169904|Med15|94112|mediator complex subunit 15
mm9_v1_chr13_-_23557675_23557769	1.12142	FOX{I1,J2}.p2	AK142596|Btn1a1|12231|butyrophilin, subfamily 1, member A1	BC011497|Btn1a1|12231|butyrophilin, subfamily 1, member A1	BC009817|Btn1a1|12231|butyrophilin, subfamily 1, member A1	AK021333|Btn1a1|12231|butyrophilin, subfamily 1, member A1	AK145168|Btn1a1|12231|butyrophilin, subfamily 1, member A1	NM_013483|Btn1a1|12231|butyrophilin, subfamily 1, member A1
mm9_v1_chr10_-_75573682_75573762	1.1209	FOX{I1,J2}.p2	AF411960|Slc5a4b|64454|solute carrier family 5 (neutral amino acid transporters, system A), member 4b	BC109133|Slc5a4b|64454|solute carrier family 5 (neutral amino acid transporters, system A), member 4b	BC109134|Slc5a4b|64454|solute carrier family 5 (neutral amino acid transporters, system A), member 4b	BC127612|Slc5a4b|64454|solute carrier family 5 (neutral amino acid transporters, system A), member 4b	BC127615|Slc5a4b|64454|solute carrier family 5 (neutral amino acid transporters, system A), member 4b	BC128465|Slc5a4b|64454|solute carrier family 5 (neutral amino acid transporters, system A), member 4b	AK144296|Slc5a4b|64454|solute carrier family 5 (neutral amino acid transporters, system A), member 4b	AF251268|Slc5a4b|64454|solute carrier family 5 (neutral amino acid transporters, system A), member 4b	NM_023219|Slc5a4b|64454|solute carrier family 5 (neutral amino acid transporters, system A), member 4b
mm9_v1_chr4_+_141000576_141000628	1.12084	FOX{I1,J2}.p2	NM_009541|Zbtb17|22642|zinc finger and BTB domain containing 17	U14556|Zbtb17|22642|zinc finger and BTB domain containing 17	AK051971|Zbtb17|22642|zinc finger and BTB domain containing 17	U22396|Zbtb17|22642|zinc finger and BTB domain containing 17	BC060055|Zbtb17|22642|zinc finger and BTB domain containing 17	AK134251|Zbtb17|22642|zinc finger and BTB domain containing 17
mm9_v1_chr5_-_77640458_77640477	1.1201	FOX{I1,J2}.p2	BC087876|Spink2|69982|serine peptidase inhibitor, Kazal type 2	BC048619|Spink2|69982|serine peptidase inhibitor, Kazal type 2	AK005709|Spink2|69982|serine peptidase inhibitor, Kazal type 2	NM_183284|Spink2|69982|serine peptidase inhibitor, Kazal type 2
mm9_v1_chr1_+_74438139_74438172	1.11881	FOX{I1,J2}.p2	AY028804|Ctdsp1|227292|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1
mm9_v1_chr4_+_88425753_88425753	1.1181	FOX{I1,J2}.p2	NM_001161608|Gm13272|545648|predicted gene 13272	NM_001161609|Gm13285|545654|predicted gene 13285
mm9_v1_chr2_-_39081799_39081884	1.11763	FOX{I1,J2}.p2	AK002764|Ppp6c|67857|protein phosphatase 6, catalytic subunit	AK009104|Ppp6c|67857|protein phosphatase 6, catalytic subunit	NM_024209|Ppp6c|67857|protein phosphatase 6, catalytic subunit	BC002223|Ppp6c|67857|protein phosphatase 6, catalytic subunit
mm9_v1_chr5_+_117583596_117583674	1.11561	FOX{I1,J2}.p2	AK155208|Taok3|330177|TAO kinase 3	NM_001081308|Taok3|330177|TAO kinase 3	AK171353|Taok3|330177|TAO kinase 3	AK037817|Taok3|330177|TAO kinase 3	AK042181|Taok3|330177|TAO kinase 3
mm9_v1_chr11_+_68859125_68859285	1.11122	FOX{I1,J2}.p2	NM_011496|Aurkb|20877|aurora kinase B	AK132006|Aurkb|20877|aurora kinase B	BC003261|Aurkb|20877|aurora kinase B	AK075951|Aurkb|20877|aurora kinase B	U69107|Aurkb|20877|aurora kinase B	AK191945|Aurkb|20877|aurora kinase B
mm9_v1_chr6_-_129050920_129050933	1.11003	FOX{I1,J2}.p2	BC051091|Clec2e|232409|C-type lectin domain family 2, member e	NM_153506|Clec2e|232409|C-type lectin domain family 2, member e
mm9_v1_chr7_-_106632113_106632218	1.10995	FOX{I1,J2}.p2	AK206775|Rps3|27050|ribosomal protein S3	X76772|Rps3|27050|ribosomal protein S3	BC010721|Rps3|27050|ribosomal protein S3	AK165174|Rps3|27050|ribosomal protein S3	AK167266|Rps3|27050|ribosomal protein S3	AK168845|Rps3|27050|ribosomal protein S3	AK150479|Rps3|27050|ribosomal protein S3	AK003181|Rps3|27050|ribosomal protein S3	AK011655|Rps3|27050|ribosomal protein S3	AK146796|Rps3|27050|ribosomal protein S3	AK012234|Rps3|27050|ribosomal protein S3	AK012314|Rps3|27050|ribosomal protein S3	AK012538|Rps3|27050|ribosomal protein S3	AK088038|Rps3|27050|ribosomal protein S3	AK143603|Rps3|27050|ribosomal protein S3	AK148030|Rps3|27050|ribosomal protein S3	AK160526|Rps3|27050|ribosomal protein S3	AK167210|Rps3|27050|ribosomal protein S3	AK010579|Rps3|27050|ribosomal protein S3	AK010678|Rps3|27050|ribosomal protein S3	AK051243|Rps3|27050|ribosomal protein S3	AK146165|Rps3|27050|ribosomal protein S3	AK159508|Rps3|27050|ribosomal protein S3	AK164077|Rps3|27050|ribosomal protein S3	AK166750|Rps3|27050|ribosomal protein S3	NM_012052|Rps3|27050|ribosomal protein S3
mm9_v1_chr4_-_87679175_87679310	1.10595	FOX{I1,J2}.p2	BC021420|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AF372456|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_027326|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr13_+_55471165_55471252	1.10448	FOX{I1,J2}.p2	AK154944|Rgs14|51791|regulator of G-protein signaling 14	U85055|Rgs14|51791|regulator of G-protein signaling 14
mm9_v1_chr6_-_71390481_71390504	1.10331	FOX{I1,J2}.p2	BC050876|Rmnd5a|68477|required for meiotic nuclear division 5 homolog A (S. cerevisiae)
mm9_v1_chr18_-_3299475_3299553	1.10282	FOX{I1,J2}.p2	AK076797|Crem|12916|cAMP responsive element modulator	NM_001110853|Crem|12916|cAMP responsive element modulator	AK016156|Crem|12916|cAMP responsive element modulator	AK015641|Crem|12916|cAMP responsive element modulator
mm9_v1_chr7_-_3249539_3249740	1.10182	FOX{I1,J2}.p2	AY364010|Nlrp12|378425|NLR family, pyrin domain containing 12	BC116252|Nlrp12|378425|NLR family, pyrin domain containing 12	BC116253|Nlrp12|378425|NLR family, pyrin domain containing 12	AK158158|Nlrp12|378425|NLR family, pyrin domain containing 12	NM_001033431|Nlrp12|378425|NLR family, pyrin domain containing 12
mm9_v1_chr4_+_154927385_154927543	1.10052	FOX{I1,J2}.p2	BC003294|Gnb1|14688|guanine nucleotide binding protein (G protein), beta 1
mm9_v1_chr1_-_168339909_168339980	1.10032	FOX{I1,J2}.p2	AK031716|Pogk|71592|pogo transposable element with KRAB domain	BC072587|Pogk|71592|pogo transposable element with KRAB domain	AK048067|Pogk|71592|pogo transposable element with KRAB domain	AK048752|Pogk|71592|pogo transposable element with KRAB domain	AK053898|Pogk|71592|pogo transposable element with KRAB domain	NM_001142948|Pogk|71592|pogo transposable element with KRAB domain	NM_175170|Pogk|71592|pogo transposable element with KRAB domain
mm9_v1_chr9_-_70269246_70269297	1.09586	FOX{I1,J2}.p2	CT010286|Ccnb2|12442|cyclin B2	BC008247|Ccnb2|12442|cyclin B2
mm9_v1_chr14_-_73109254_73109390	1.0939	FOX{I1,J2}.p2	AK154790|Fndc3a|319448|fibronectin type III domain containing 3A	AK172458|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr17_-_26645403_26645422	1.09236	FOX{I1,J2}.p2	BC006967|Dusp1|19252|dual specificity phosphatase 1	X61940|Dusp1|19252|dual specificity phosphatase 1	AK159658|Dusp1|19252|dual specificity phosphatase 1	AK150433|Dusp1|19252|dual specificity phosphatase 1	AK152183|Dusp1|19252|dual specificity phosphatase 1	AK152905|Dusp1|19252|dual specificity phosphatase 1	AK159251|Dusp1|19252|dual specificity phosphatase 1	AK159363|Dusp1|19252|dual specificity phosphatase 1	AK159567|Dusp1|19252|dual specificity phosphatase 1	AK167602|Dusp1|19252|dual specificity phosphatase 1	AK168627|Dusp1|19252|dual specificity phosphatase 1	NM_013642|Dusp1|19252|dual specificity phosphatase 1	AK145903|Dusp1|19252|dual specificity phosphatase 1	AK152324|Dusp1|19252|dual specificity phosphatase 1
mm9_v1_chr5_+_33760994_33761117	1.09	FOX{I1,J2}.p2	AK084585|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene	AK163728|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene
mm9_v1_chr10_-_78215809_78215811	1.08808	FOX{I1,J2}.p2	AK016452|Ccdc105|70976|coiled-coil domain containing 105	NM_027630|Ccdc105|70976|coiled-coil domain containing 105
mm9_v1_chr11_-_101036732_101036756	1.08767	FOX{I1,J2}.p2	AF215983|Ccr10|12777|chemokine (C-C motif) receptor 10	AF208238|Ccr10|12777|chemokine (C-C motif) receptor 10	AF215982|Ccr10|12777|chemokine (C-C motif) receptor 10	AK090044|Ccr10|12777|chemokine (C-C motif) receptor 10	BC117043|Ccr10|12777|chemokine (C-C motif) receptor 10	BC120542|Ccr10|12777|chemokine (C-C motif) receptor 10	NM_007721|Ccr10|12777|chemokine (C-C motif) receptor 10
mm9_v1_chr12_+_56404272_56404278	1.08453	FOX{I1,J2}.p2	AK172942|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene
mm9_v1_chr1_+_179659944_179659944	1.08413	FOX{I1,J2}.p2	AK006014|1700016C15Rik|69428|RIKEN cDNA 1700016C15 gene	NM_027077|1700016C15Rik|69428|RIKEN cDNA 1700016C15 gene
mm9_v1_chr16_+_3908975_3909105	1.083	FOX{I1,J2}.p2	BC024910|Cluap1|76779|clusterin associated protein 1	NM_029738|Cluap1|76779|clusterin associated protein 1	AK009540|Cluap1|76779|clusterin associated protein 1	AK134648|Cluap1|76779|clusterin associated protein 1	AK166050|Cluap1|76779|clusterin associated protein 1	AK011846|Cluap1|76779|clusterin associated protein 1
mm9_v1_chr1_-_37973274_37973337	1.08283	FOX{I1,J2}.p2	BC147562|Lyg2|332427|lysozyme G-like 2	BC147567|Lyg2|332427|lysozyme G-like 2	AK132442|Lyg2|332427|lysozyme G-like 2	NM_001033427|Lyg2|332427|lysozyme G-like 2
mm9_v1_chr19_+_58586482_58586511	1.08197	FOX{I1,J2}.p2	AK005864|1700011F14Rik|75645|RIKEN cDNA 1700011F14 gene	NM_029372|1700011F14Rik|75645|RIKEN cDNA 1700011F14 gene	BC049707|1700011F14Rik|75645|RIKEN cDNA 1700011F14 gene
mm9_v1_chr17_+_80706746_80706746	1.08152	FOX{I1,J2}.p2	NM_001145452|Arhgef33|381112|Rho guanine nucleotide exchange factor (GEF) 33
mm9_v1_chr2_+_127164374_127164374	1.07998	FOX{I1,J2}.p2	AK033037|Astl|215095|astacin-like metalloendopeptidase (M12 family)	NM_172539|Astl|215095|astacin-like metalloendopeptidase (M12 family)
mm9_v1_chr10_+_75495391_75495470	1.0797	FOX{I1,J2}.p2	AK144644|Zfp280b|64453|zinc finger protein 280B	AK144736|Zfp280b|64453|zinc finger protein 280B	BC094574|Zfp280b|64453|zinc finger protein 280B	AK031331|Zfp280b|64453|zinc finger protein 280B	BC117873|Zfp280b|64453|zinc finger protein 280B	BC117874|Zfp280b|64453|zinc finger protein 280B
mm9_v1_chr13_-_84204320_84204376	1.07711	FOX{I1,J2}.p2	AK082072|LOC553095|553095|hypothetical LOC553095
mm9_v1_chr3_-_83645515_83645531	1.07678	FOX{I1,J2}.p2	AK005043|Tlr2|24088|toll-like receptor 2	NM_011905|Tlr2|24088|toll-like receptor 2
mm9_v1_chr12_-_16747022_16747030	1.0752	FOX{I1,J2}.p2	AK147337|Greb1|268527|gene regulated by estrogen in breast cancer protein
mm9_v1_chr17_-_33897428_33897430	1.07515	FOX{I1,J2}.p2	NM_008997|Rab11b|19326|RAB11B, member RAS oncogene family
mm9_v1_chr3_-_92524255_92524273	1.07475	FOX{I1,J2}.p2	BC060283|Lce1f|67828|late cornified envelope 1F	AK003518|Lce1f|67828|late cornified envelope 1F	NM_026394|Lce1f|67828|late cornified envelope 1F
mm9_v1_chrX_-_7651692_7651751	1.07294	FOX{I1,J2}.p2	AK169389|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AK088405|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AF193861|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AF019969|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AK132238|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	BC023860|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)
mm9_v1_chr7_+_88006993_88006993	1.07177	FOX{I1,J2}.p2	BC046961|Zscan2|22691|zinc finger and SCAN domain containing 2	NM_009553|Zscan2|22691|zinc finger and SCAN domain containing 2
mm9_v1_chr6_-_40850379_40850385	1.07076	FOX{I1,J2}.p2	BC048599|BC048599|232717|cDNA sequence BC048599	AK075754|BC048599|232717|cDNA sequence BC048599	NM_175020|BC048599|232717|cDNA sequence BC048599
mm9_v1_chr13_+_49063750_49063790	1.07006	FOX{I1,J2}.p2	AK014080|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene	AK021143|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene
mm9_v1_chr19_+_4006795_4006924	1.06911	FOX{I1,J2}.p2	
mm9_v1_chrX_-_6618729_6618744	1.0687	FOX{I1,J2}.p2	AJ555465|Ccnb3|209091|cyclin B3	AJ555464|Ccnb3|209091|cyclin B3	NM_183015|Ccnb3|209091|cyclin B3
mm9_v1_chr8_+_23303277_23303337	1.06852	FOX{I1,J2}.p2	AK161865|Vps36|70160|vacuolar protein sorting 36 (yeast)	AK008946|Vps36|70160|vacuolar protein sorting 36 (yeast)	AK150754|Vps36|70160|vacuolar protein sorting 36 (yeast)	AK151035|Vps36|70160|vacuolar protein sorting 36 (yeast)	AK156241|Vps36|70160|vacuolar protein sorting 36 (yeast)	BC010811|Vps36|70160|vacuolar protein sorting 36 (yeast)	NM_027338|Vps36|70160|vacuolar protein sorting 36 (yeast)
mm9_v1_chr10_+_22364816_22364969	1.06755	FOX{I1,J2}.p2	AJ549317|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	NM_178934|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	AK143263|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	AK028970|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	BC096454|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	AK031659|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	AY230881|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	AK035972|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	BC116315|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	BC116314|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	BC138316|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12	BC138317|Slc2a12|353169|solute carrier family 2 (facilitated glucose transporter), member 12
mm9_v1_chr19_-_42358648_42358713	1.0654	FOX{I1,J2}.p2	AK013349|Crtac1|72832|cartilage acidic protein 1
mm9_v1_chr9_-_14588941_14589004	1.06482	FOX{I1,J2}.p2	AK155932|Ankrd49|56503|ankyrin repeat domain 49	AK137504|Ankrd49|56503|ankyrin repeat domain 49	AK153923|Ankrd49|56503|ankyrin repeat domain 49	AK157315|Ankrd49|56503|ankyrin repeat domain 49	AK132850|Ankrd49|56503|ankyrin repeat domain 49	AF028722|Ankrd49|56503|ankyrin repeat domain 49
mm9_v1_chr8_-_125421315_125421317	1.06467	FOX{I1,J2}.p2	
mm9_v1_chr6_-_122692754_122692762	1.06455	FOX{I1,J2}.p2	AK140176|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	NM_011401|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr1_-_194956399_194956457	1.06297	FOX{I1,J2}.p2	AK088756|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	AK147251|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	AK052355|Diexf|215193|digestive organ expansion factor homolog (zebrafish)	NM_145415|Diexf|215193|digestive organ expansion factor homolog (zebrafish)
mm9_v1_chr2_+_152695336_152695453	1.06187	FOX{I1,J2}.p2	AK167030|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)	AK011311|Tpx2|72119|TPX2, microtubule-associated protein homolog (Xenopus laevis)
mm9_v1_chr2_+_164323044_164323060	1.05916	FOX{I1,J2}.p2	AK162573|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	BC016520|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	BC034175|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T
mm9_v1_chr11_-_51414445_51414449	1.0561	FOX{I1,J2}.p2	
mm9_v1_chr9_-_44611055_44611072	1.05493	FOX{I1,J2}.p2	AK149384|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr19_-_34953810_34953944	1.05368	FOX{I1,J2}.p2	AK017345|Pank1|75735|pantothenate kinase 1	AF347700|Pank1|75735|pantothenate kinase 1	NM_001114339|Pank1|75735|pantothenate kinase 1
mm9_v1_chr2_+_153988342_153988366	1.05346	FOX{I1,J2}.p2	AK009835|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010012|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010159|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	NM_025990|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009441|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009629|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009803|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010145|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009329|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009531|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009562|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009580|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK009695|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010051|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010158|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	AK010115|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	BC115526|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene	BC115527|2310021H06Rik|67135|RIKEN cDNA 2310021H06 gene
mm9_v1_chr6_-_29162226_29162288	1.0507	FOX{I1,J2}.p2	BC053416|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1	NM_011829|Impdh1|23917|inosine 5'-phosphate dehydrogenase 1
mm9_v1_chr6_-_57929295_57929295	1.05056	FOX{I1,J2}.p2	NM_053238|Vmn1r25|113865|vomeronasal 1 receptor 25
mm9_v1_chr11_-_48864726_48864743	1.05024	FOX{I1,J2}.p2	BC066104|9930111J21Rik2|245240|RIKEN cDNA 9930111J21 gene 2	AK037088|9930111J21Rik2|245240|RIKEN cDNA 9930111J21 gene 2	NM_173434|9930111J21Rik2|245240|RIKEN cDNA 9930111J21 gene 2
mm9_v1_chr7_+_148645664_148645872	1.04811	FOX{I1,J2}.p2	BC026807|Pnpla2|66853|patatin-like phospholipase domain containing 2
mm9_v1_chr16_+_17208227_17208227	1.04699	FOX{I1,J2}.p2	NM_001033338|Rimbp3|239731|RIMS binding protein 3
mm9_v1_chr19_+_32560258_32560494	1.04349	FOX{I1,J2}.p2	AF046908|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	NM_010799|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK128911|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK017558|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK042453|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK151486|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AK080471|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1	AB041574|Minpp1|17330|multiple inositol polyphosphate histidine phosphatase 1
mm9_v1_chr7_-_36181628_36181850	1.04347	FOX{I1,J2}.p2	BC096687|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK153918|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK082457|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	NM_178643|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK040248|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK031566|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK166481|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene
mm9_v1_chr1_-_186635140_186635191	1.0431	FOX{I1,J2}.p2	NM_001081361|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1
mm9_v1_chr4_+_147242922_147243087	1.04295	FOX{I1,J2}.p2	NM_010244|Fv1|14349|Friend virus susceptibility 1
mm9_v1_chr1_+_133585271_133585283	1.04147	FOX{I1,J2}.p2	AK030688|5430435G22Rik|226421|RIKEN cDNA 5430435G22 gene	NM_145509|5430435G22Rik|226421|RIKEN cDNA 5430435G22 gene	AK036056|5430435G22Rik|226421|RIKEN cDNA 5430435G22 gene
mm9_v1_chr7_+_129210954_129210978	1.04101	FOX{I1,J2}.p2	AK011862|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr1_+_19198994_19199078	1.04081	FOX{I1,J2}.p2	AK017373|Tcfap2b|21419|transcription factor AP-2 beta	NM_009334|Tcfap2b|21419|transcription factor AP-2 beta	AK005128|Tcfap2b|21419|transcription factor AP-2 beta	AK028906|Tcfap2b|21419|transcription factor AP-2 beta	X78197|Tcfap2b|21419|transcription factor AP-2 beta
mm9_v1_chrX_+_35548300_35548338	1.04053	FOX{I1,J2}.p2	AK080301|Zbtb33|56805|zinc finger and BTB domain containing 33
mm9_v1_chr6_+_126803115_126803190	1.04033	FOX{I1,J2}.p2	NM_009650|Akap3|11642|A kinase (PRKA) anchor protein 3	BC100458|Akap3|11642|A kinase (PRKA) anchor protein 3	AF093406|Akap3|11642|A kinase (PRKA) anchor protein 3
mm9_v1_chr9_+_110666178_110666184	1.03875	FOX{I1,J2}.p2	AK146943|Myl3|17897|myosin, light polypeptide 3	BC061222|Myl3|17897|myosin, light polypeptide 3	AK002312|Myl3|17897|myosin, light polypeptide 3	NM_010859|Myl3|17897|myosin, light polypeptide 3
mm9_v1_chr11_+_110927475_110927548	1.03816	FOX{I1,J2}.p2	AK044915|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2	NM_008425|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2	X73052|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2
mm9_v1_chr4_+_88452089_88452089	1.0311	FOX{I1,J2}.p2	NM_001161609|Gm13285|545654|predicted gene 13285
mm9_v1_chrX_-_7753020_7753088	1.03053	FOX{I1,J2}.p2	AK166256|Tbc1d25|209815|TBC1 domain family, member 25	AK040932|Tbc1d25|209815|TBC1 domain family, member 25	BC060178|Tbc1d25|209815|TBC1 domain family, member 25
mm9_v1_chr7_+_6173879_6173879	1.03015	FOX{I1,J2}.p2	AK139659|Zscan5b|170734|zinc finger and SCAN domain containing 5B	NM_133204|Zscan5b|170734|zinc finger and SCAN domain containing 5B
mm9_v1_chr11_-_32427563_32427578	1.02719	FOX{I1,J2}.p2	AK015057|Efcab9|69306|EF-hand calcium binding domain 9	AK161300|Efcab9|69306|EF-hand calcium binding domain 9	BC087911|Efcab9|69306|EF-hand calcium binding domain 9	NM_027031|Efcab9|69306|EF-hand calcium binding domain 9	AK005716|Efcab9|69306|EF-hand calcium binding domain 9
mm9_v1_chr10_+_11001072_11001225	1.02612	FOX{I1,J2}.p2	NM_027968|Fbxo30|71865|F-box protein 30	AK083479|Fbxo30|71865|F-box protein 30	AK135274|Fbxo30|71865|F-box protein 30
mm9_v1_chr19_-_32423805_32423805	1.02585	FOX{I1,J2}.p2	BC076618|Sgms1|208449|sphingomyelin synthase 1	NM_001168525|Sgms1|208449|sphingomyelin synthase 1
mm9_v1_chr2_+_129442079_129442192	1.02578	FOX{I1,J2}.p2	AK195466|Sirpa|19261|signal-regulatory protein alpha
mm9_v1_chr6_-_67326042_67326130	1.02361	FOX{I1,J2}.p2	BC137745|Il12rb2|16162|interleukin 12 receptor, beta 2	NM_008354|Il12rb2|16162|interleukin 12 receptor, beta 2	U64199|Il12rb2|16162|interleukin 12 receptor, beta 2
mm9_v1_chr17_-_35164860_35164960	1.02243	FOX{I1,J2}.p2	AK019275|Ng23|78376|Ng23 protein	BC147772|Ng23|78376|Ng23 protein	BC147780|Ng23|78376|Ng23 protein	BC172157|Ng23|78376|Ng23 protein	NM_023893|Ng23|78376|Ng23 protein
mm9_v1_chr12_-_105938606_105938711	1.02063	FOX{I1,J2}.p2	AK137929|Dicer1|192119|Dicer1, Dcr-1 homolog (Drosophila)
mm9_v1_chr1_+_155599081_155599148	1.01972	FOX{I1,J2}.p2	AK053125|Rnasel|24014|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)	AK054205|Rnasel|24014|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
mm9_v1_chr14_+_51823364_51823369	1.0195	FOX{I1,J2}.p2	NM_001017422|Ear4|53877|eosinophil-associated, ribonuclease A family, member 4	NM_017389|Ear14|503847|eosinophil-associated, ribonuclease A family, member 14
mm9_v1_chr9_-_35936363_35936363	1.01776	FOX{I1,J2}.p2	NM_001167587|Gm5916|546123|predicted gene 5916
mm9_v1_chr3_+_81800843_81800866	1.01738	FOX{I1,J2}.p2	NM_021370|Accn5|58170|amiloride-sensitive cation channel 5, intestinal	Y19035|Accn5|58170|amiloride-sensitive cation channel 5, intestinal
mm9_v1_chr3_+_94938009_94938098	1.01528	FOX{I1,J2}.p2	AK154180|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1	NM_153121|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1	BC024838|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1	AK054348|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1	AK011517|Lysmd1|217779|LysM, putative peptidoglycan-binding, domain containing 1
mm9_v1_chr6_-_89986834_89986834	1.015	FOX{I1,J2}.p2	NM_053218|Vmn1r48|113845|vomeronasal 1 receptor 48
mm9_v1_chr11_-_106860750_106860783	1.01479	FOX{I1,J2}.p2	BC094011|Kpna2|16647|karyopherin (importin) alpha 2	BC106110|Kpna2|16647|karyopherin (importin) alpha 2	BC082280|Kpna2|16647|karyopherin (importin) alpha 2	BC086789|Kpna2|16647|karyopherin (importin) alpha 2	BC006720|Kpna2|16647|karyopherin (importin) alpha 2	BC003274|Kpna2|16647|karyopherin (importin) alpha 2	U12270|Kpna2|16647|karyopherin (importin) alpha 2	AK139850|Kpna2|16647|karyopherin (importin) alpha 2	AK166982|Kpna2|16647|karyopherin (importin) alpha 2	AK075952|Kpna2|16647|karyopherin (importin) alpha 2	AK088496|Kpna2|16647|karyopherin (importin) alpha 2	AK147135|Kpna2|16647|karyopherin (importin) alpha 2	AK165577|Kpna2|16647|karyopherin (importin) alpha 2	AK166790|Kpna2|16647|karyopherin (importin) alpha 2	AK167551|Kpna2|16647|karyopherin (importin) alpha 2	AK169283|Kpna2|16647|karyopherin (importin) alpha 2	AK166577|Kpna2|16647|karyopherin (importin) alpha 2
mm9_v1_chr7_+_52091656_52091669	1.0132	FOX{I1,J2}.p2	AK151731|Il4i1|14204|interleukin 4 induced 1	NM_010215|Il4i1|14204|interleukin 4 induced 1	U70429|Il4i1|14204|interleukin 4 induced 1	AY157538|Il4i1|14204|interleukin 4 induced 1	AK157036|Il4i1|14204|interleukin 4 induced 1	AK150582|Il4i1|14204|interleukin 4 induced 1	AK151030|Il4i1|14204|interleukin 4 induced 1	AK151171|Il4i1|14204|interleukin 4 induced 1	AK152538|Il4i1|14204|interleukin 4 induced 1	BC115960|Il4i1|14204|interleukin 4 induced 1
mm9_v1_chr14_-_51875785_51875786	1.01183	FOX{I1,J2}.p2	BC020070|Ear11|93726|eosinophil-associated, ribonuclease A family, member 11	BC027557|Ear11|93726|eosinophil-associated, ribonuclease A family, member 11	NM_053113|Ear11|93726|eosinophil-associated, ribonuclease A family, member 11
mm9_v1_chr5_-_92483744_92484066	1.01035	FOX{I1,J2}.p2	AK169571|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2	AK220349|G3bp2|23881|GTPase activating protein (SH3 domain) binding protein 2
mm9_v1_chr4_-_136913576_136913662	1.01013	FOX{I1,J2}.p2	U37720|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167195|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	BC064792|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167400|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168013|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168076|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168089|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168276|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169232|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK144216|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167609|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK003098|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK075567|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK145659|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK154870|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK166281|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK051543|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK151726|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168820|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK150563|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168503|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169122|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169805|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK151087|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK153564|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168758|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK159470|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	NM_009861|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)
mm9_v1_chr4_+_108952859_108952895	1.01004	FOX{I1,J2}.p2	NM_007943|Eps15|13858|epidermal growth factor receptor pathway substrate 15
mm9_v1_chr9_-_119118203_119118222	1.00799	FOX{I1,J2}.p2	BC021449|Slc22a13|102570|solute carrier family 22 (organic cation transporter), member 13	AF529220|Slc22a13|102570|solute carrier family 22 (organic cation transporter), member 13	NM_133980|Slc22a13|102570|solute carrier family 22 (organic cation transporter), member 13
mm9_v1_chr6_-_124307086_124307103	1.00777	FOX{I1,J2}.p2	BC120816|1700013D24Rik|76921|RIKEN cDNA 1700013D24 gene	BC120818|1700013D24Rik|76921|RIKEN cDNA 1700013D24 gene	NM_001177502|1700013D24Rik|76921|RIKEN cDNA 1700013D24 gene
mm9_v1_chr17_+_73267643_73267665	1.00555	FOX{I1,J2}.p2	AK020110|Lbh|77889|limb-bud and heart	NM_029999|Lbh|77889|limb-bud and heart	AF317517|Lbh|77889|limb-bud and heart	BC026827|Lbh|77889|limb-bud and heart	BC052470|Lbh|77889|limb-bud and heart
mm9_v1_chr4_+_88419897_88419897	1.00472	FOX{I1,J2}.p2	NM_001161609|Gm13285|545654|predicted gene 13285
mm9_v1_chr3_-_58984006_58984035	1.00418	FOX{I1,J2}.p2	AF295366|Gpr87|84111|G protein-coupled receptor 87	NM_032399|Gpr87|84111|G protein-coupled receptor 87	BC125653|Gpr87|84111|G protein-coupled receptor 87	BC125655|Gpr87|84111|G protein-coupled receptor 87
mm9_v1_chr2_+_139502919_139502927	1.00415	FOX{I1,J2}.p2	AK044859|Ism1|319909|isthmin 1 homolog (zebrafish)
mm9_v1_chr9_-_99776467_99776588	1.00409	FOX{I1,J2}.p2	BC069948|Sox14|20669|SRY-box containing gene 14	AK138208|Sox14|20669|SRY-box containing gene 14	BC055767|Sox14|20669|SRY-box containing gene 14	BC083360|Sox14|20669|SRY-box containing gene 14	BC100555|Sox14|20669|SRY-box containing gene 14	NM_011440|Sox14|20669|SRY-box containing gene 14
mm9_v1_chr3_+_88132260_88132323	1.00357	FOX{I1,J2}.p2	AK181690|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK185188|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK191578|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK193175|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK194674|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK197570|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK204093|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK204506|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK212912|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene	AK217267|0610031J06Rik|56700|RIKEN cDNA 0610031J06 gene
mm9_v1_chr17_+_25960571_25960660	0.998491	FOX{I1,J2}.p2	NM_173741|Wdr24|268933|WD repeat domain 24	AK078694|Wdr24|268933|WD repeat domain 24	AK170253|Wdr24|268933|WD repeat domain 24	BC037651|Wdr24|268933|WD repeat domain 24
mm9_v1_chr9_-_110892114_110892227	0.998295	FOX{I1,J2}.p2	AY562227|Rtp3|235636|receptor transporter protein 3	BC150678|Rtp3|235636|receptor transporter protein 3	AJ428064|Rtp3|235636|receptor transporter protein 3	BC112903|Rtp3|235636|receptor transporter protein 3	NM_153100|Rtp3|235636|receptor transporter protein 3
mm9_v1_chr4_+_88422825_88422825	0.997944	FOX{I1,J2}.p2	NM_001161609|Gm13285|545654|predicted gene 13285
mm9_v1_chr12_+_66176588_66176613	0.996969	FOX{I1,J2}.p2	AK039944|Fancm|104806|Fanconi anemia, complementation group M	AK084697|Fancm|104806|Fanconi anemia, complementation group M	AK086395|Fancm|104806|Fanconi anemia, complementation group M	AK050306|Fancm|104806|Fanconi anemia, complementation group M	NM_178912|Fancm|104806|Fanconi anemia, complementation group M	AK053715|Fancm|104806|Fanconi anemia, complementation group M	BC150785|Fancm|104806|Fanconi anemia, complementation group M	AK173211|Fancm|104806|Fanconi anemia, complementation group M
mm9_v1_chr11_+_95995099_95995099	0.996681	FOX{I1,J2}.p2	AM690749|Ttll6|237930|tubulin tyrosine ligase-like family, member 6	NM_172799|Ttll6|237930|tubulin tyrosine ligase-like family, member 6
mm9_v1_chr4_+_88434535_88434535	0.99654	FOX{I1,J2}.p2	NM_001161609|Gm13285|545654|predicted gene 13285
mm9_v1_chr11_+_80022524_80022572	0.996104	FOX{I1,J2}.p2	AK147801|Rhot1|59040|ras homolog gene family, member T1	AK167502|Rhot1|59040|ras homolog gene family, member T1	NM_001163354|Rhot1|59040|ras homolog gene family, member T1	NM_001163355|Rhot1|59040|ras homolog gene family, member T1	NM_021536|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr8_+_74474946_74475007	0.994393	FOX{I1,J2}.p2	AK158413|Zfp961|234413|zinc finger protein 961	NM_001164581|Zfp961|234413|zinc finger protein 961	BC065788|Zfp961|234413|zinc finger protein 961	AK020714|Zfp961|234413|zinc finger protein 961	BC049349|Zfp961|234413|zinc finger protein 961
mm9_v1_chr2_+_34287544_34287544	0.994103	FOX{I1,J2}.p2	BC090644|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	NM_177345|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr19_-_11205360_11205367	0.993116	FOX{I1,J2}.p2	AK006056|1700017D01Rik|69369|RIKEN cDNA 1700017D01 gene	NM_027058|1700017D01Rik|69369|RIKEN cDNA 1700017D01 gene
mm9_v1_chr4_+_88443300_88443300	0.992229	FOX{I1,J2}.p2	NM_001161609|Gm13285|545654|predicted gene 13285
mm9_v1_chr4_+_88437453_88437453	0.992229	FOX{I1,J2}.p2	NM_001161609|Gm13285|545654|predicted gene 13285
mm9_v1_chr19_-_8860725_8860906	0.991976	FOX{I1,J2}.p2	BC028647|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	AK144881|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	BC020299|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	NM_146092|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	AK077149|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	NM_001177798|Taf6l|225895|TAF6-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor
mm9_v1_chr9_-_119213954_119213965	0.990666	FOX{I1,J2}.p2	AK031790|Oxsr1|108737|oxidative-stress responsive 1	AK075837|Oxsr1|108737|oxidative-stress responsive 1	NM_133985|Oxsr1|108737|oxidative-stress responsive 1
mm9_v1_chr14_+_31292797_31292864	0.990354	FOX{I1,J2}.p2	BC066173|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	AK047460|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	AK171707|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm9_v1_chr6_-_128388673_128388715	0.989641	FOX{I1,J2}.p2	AK051433|Fkbp4|14228|FK506 binding protein 4	AK159211|Fkbp4|14228|FK506 binding protein 4
mm9_v1_chr18_+_20469364_20469373	0.989186	FOX{I1,J2}.p2	BC154410|Dsg1a|13510|desmoglein 1 alpha	NM_010079|Dsg1a|13510|desmoglein 1 alpha
mm9_v1_chr4_-_124359695_124359773	0.987672	FOX{I1,J2}.p2	AK008801|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
mm9_v1_chr13_-_8870975_8870975	0.986465	FOX{I1,J2}.p2	NM_001039388|Wdr37|207615|WD repeat domain 37
mm9_v1_chr3_-_94937886_94937954	0.982746	FOX{I1,J2}.p2	BC028867|Scnm1|69269|sodium channel modifier 1	AK013948|Scnm1|69269|sodium channel modifier 1	NM_001163573|Scnm1|69269|sodium channel modifier 1	NM_027013|Scnm1|69269|sodium channel modifier 1
mm9_v1_chr10_+_73284612_73284690	0.982428	FOX{I1,J2}.p2	NM_001142735|Pcdh15|11994|protocadherin 15	NM_001142736|Pcdh15|11994|protocadherin 15	NM_001142737|Pcdh15|11994|protocadherin 15	NM_001142738|Pcdh15|11994|protocadherin 15	NM_001142739|Pcdh15|11994|protocadherin 15	NM_001142740|Pcdh15|11994|protocadherin 15	NM_001142741|Pcdh15|11994|protocadherin 15	NM_001142742|Pcdh15|11994|protocadherin 15	NM_001142743|Pcdh15|11994|protocadherin 15	NM_001142746|Pcdh15|11994|protocadherin 15	NM_001142747|Pcdh15|11994|protocadherin 15	NM_001142748|Pcdh15|11994|protocadherin 15	NM_001142760|Pcdh15|11994|protocadherin 15	NM_023115|Pcdh15|11994|protocadherin 15	AF281899|Pcdh15|11994|protocadherin 15	AY949849|Pcdh15|11994|protocadherin 15	DQ354396|Pcdh15|11994|protocadherin 15	DQ354397|Pcdh15|11994|protocadherin 15	DQ354398|Pcdh15|11994|protocadherin 15	DQ354399|Pcdh15|11994|protocadherin 15	DQ354400|Pcdh15|11994|protocadherin 15	DQ354401|Pcdh15|11994|protocadherin 15	DQ354402|Pcdh15|11994|protocadherin 15	DQ354403|Pcdh15|11994|protocadherin 15	DQ354404|Pcdh15|11994|protocadherin 15	DQ354405|Pcdh15|11994|protocadherin 15	DQ354406|Pcdh15|11994|protocadherin 15	DQ354407|Pcdh15|11994|protocadherin 15	DQ354408|Pcdh15|11994|protocadherin 15	DQ354409|Pcdh15|11994|protocadherin 15	DQ354410|Pcdh15|11994|protocadherin 15	DQ354411|Pcdh15|11994|protocadherin 15	DQ354412|Pcdh15|11994|protocadherin 15	DQ354413|Pcdh15|11994|protocadherin 15	DQ354414|Pcdh15|11994|protocadherin 15	DQ354415|Pcdh15|11994|protocadherin 15	AK139154|Pcdh15|11994|protocadherin 15	DQ354416|Pcdh15|11994|protocadherin 15	DQ354417|Pcdh15|11994|protocadherin 15	DQ354418|Pcdh15|11994|protocadherin 15
mm9_v1_chr13_+_23848805_23848889	0.981041	FOX{I1,J2}.p2	BC132186|Hist1h4b|326620|histone cluster 1, H4b	BC132212|Hist1h4b|326620|histone cluster 1, H4b	NM_178193|Hist1h4b|326620|histone cluster 1, H4b
mm9_v1_chr2_-_38640034_38640034	0.979879	FOX{I1,J2}.p2	NM_001159548|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1	NM_001159549|Nr6a1|14536|nuclear receptor subfamily 6, group A, member 1
mm9_v1_chr6_+_24698345_24698366	0.979645	FOX{I1,J2}.p2	AK014599|Hyal4|77042|hyaluronoglucosaminidase 4	BC125402|Hyal4|77042|hyaluronoglucosaminidase 4	BC132096|Hyal4|77042|hyaluronoglucosaminidase 4	NM_029848|Hyal4|77042|hyaluronoglucosaminidase 4
mm9_v1_chr9_-_40812668_40812668	0.97939	FOX{I1,J2}.p2	AF001104|Crtam|54698|cytotoxic and regulatory T cell molecule	BC117715|Crtam|54698|cytotoxic and regulatory T cell molecule	BC117716|Crtam|54698|cytotoxic and regulatory T cell molecule	NM_019465|Crtam|54698|cytotoxic and regulatory T cell molecule
mm9_v1_chr16_-_94008999_94009081	0.979025	FOX{I1,J2}.p2	BC132183|Cldn14|56173|claudin 14	BC138497|Cldn14|56173|claudin 14	AF314089|Cldn14|56173|claudin 14	NM_019500|Cldn14|56173|claudin 14
mm9_v1_chr1_+_179374783_179374796	0.978962	FOX{I1,J2}.p2	BC089333|Zfp238|30928|zinc finger protein 238	NM_001012330|Zfp238|30928|zinc finger protein 238
mm9_v1_chr7_-_25084567_25084655	0.978898	FOX{I1,J2}.p2	NM_009561|Zfp61|22719|zinc finger protein 61	BC006618|Zfp61|22719|zinc finger protein 61
mm9_v1_chr16_-_36562219_36562219	0.977297	FOX{I1,J2}.p2	AF110178|Casr|12374|calcium-sensing receptor	AF110179|Casr|12374|calcium-sensing receptor	NM_013803|Casr|12374|calcium-sensing receptor
mm9_v1_chr3_-_93858806_93858806	0.974474	FOX{I1,J2}.p2	AK033449|Gm9125|668359|predicted gene 9125	NM_001163730|Gm9125|668359|predicted gene 9125
mm9_v1_chr18_-_9619426_9619475	0.974223	FOX{I1,J2}.p2	AK005743|Cetn1|26369|centrin 1	AK005736|Cetn1|26369|centrin 1	D16301|Cetn1|26369|centrin 1	AK005837|Cetn1|26369|centrin 1	AK015808|Cetn1|26369|centrin 1	AK132753|Cetn1|26369|centrin 1	BC061155|Cetn1|26369|centrin 1	AK006940|Cetn1|26369|centrin 1	BC048488|Cetn1|26369|centrin 1	NM_007593|Cetn1|26369|centrin 1	AK076986|Cetn1|26369|centrin 1
mm9_v1_chr4_-_132895019_132895110	0.971892	FOX{I1,J2}.p2	BC048824|Wdtc1|230796|WD and tetratricopeptide repeats 1
mm9_v1_chr4_+_15885062_15885148	0.971504	FOX{I1,J2}.p2	AK132302|Nbn|27354|nibrin	AK134805|Nbn|27354|nibrin	AK134960|Nbn|27354|nibrin	AK159790|Nbn|27354|nibrin	BC013190|Nbn|27354|nibrin	NM_013752|Nbn|27354|nibrin	BC044773|Nbn|27354|nibrin	AF076687|Nbn|27354|nibrin	BC055061|Nbn|27354|nibrin	AK031933|Nbn|27354|nibrin	AF092840|Nbn|27354|nibrin	AK160614|Nbn|27354|nibrin
mm9_v1_chr4_+_45887082_45887099	0.971366	FOX{I1,J2}.p2	AK173193|1300002K09Rik|74152|RIKEN cDNA 1300002K09 gene
mm9_v1_chr2_-_25483461_25483497	0.970646	FOX{I1,J2}.p2	AK159651|Fcna|14133|ficolin A	AK133539|Fcna|14133|ficolin A	NM_007995|Fcna|14133|ficolin A
mm9_v1_chr17_-_42829185_42829232	0.970559	FOX{I1,J2}.p2	BC140980|Gpr115|78249|G protein-coupled receptor 115	AK019508|Gpr115|78249|G protein-coupled receptor 115	BC089564|Gpr115|78249|G protein-coupled receptor 115	NM_030067|Gpr115|78249|G protein-coupled receptor 115
mm9_v1_chr2_+_43410844_43410873	0.97039	FOX{I1,J2}.p2	AK014484|Kynu|70789|kynureninase (L-kynurenine hydrolase)	AK050024|Kynu|70789|kynureninase (L-kynurenine hydrolase)	NM_027552|Kynu|70789|kynureninase (L-kynurenine hydrolase)	BC069848|Kynu|70789|kynureninase (L-kynurenine hydrolase)	AK040584|Kynu|70789|kynureninase (L-kynurenine hydrolase)	BC026950|Kynu|70789|kynureninase (L-kynurenine hydrolase)
mm9_v1_chr2_-_143688908_143688908	0.969652	FOX{I1,J2}.p2	BC057580|Bfsp1|12075|beaded filament structural protein 1, in lens-CP94	NM_009751|Bfsp1|12075|beaded filament structural protein 1, in lens-CP94
mm9_v1_chr19_+_55328356_55328506	0.968864	FOX{I1,J2}.p2	AK151378|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	BC031544|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK161024|Acsl5|433256|acyl-CoA synthetase long-chain family member 5
mm9_v1_chr2_-_79969429_79969614	0.968074	FOX{I1,J2}.p2	AK050004|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	NM_001159582|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent	AK021279|Pde1a|18573|phosphodiesterase 1A, calmodulin-dependent
mm9_v1_chr14_+_55551531_55551607	0.967846	FOX{I1,J2}.p2	BC120568|Il25|140806|interleukin 25	BC125524|Il25|140806|interleukin 25	BC144962|Il25|140806|interleukin 25	NM_080729|Il25|140806|interleukin 25	AF458060|Il25|140806|interleukin 25
mm9_v1_chr2_+_23062995_23062995	0.965815	FOX{I1,J2}.p2	AK016475|4931423N10Rik|70981|RIKEN cDNA 4931423N10 gene	NM_027635|4931423N10Rik|70981|RIKEN cDNA 4931423N10 gene
mm9_v1_chr5_+_116010796_116010949	0.965795	FOX{I1,J2}.p2	BC030189|Rplp0|11837|ribosomal protein, large, P0	AK193996|Rplp0|11837|ribosomal protein, large, P0	AK205179|Rplp0|11837|ribosomal protein, large, P0
mm9_v1_chr13_+_73604668_73604698	0.965061	FOX{I1,J2}.p2	AK155286|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK081865|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK046079|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK046507|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK170723|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK171582|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK132379|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK169190|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1
mm9_v1_chr13_+_31650192_31650305	0.964881	FOX{I1,J2}.p2	BC047155|Foxq1|15220|forkhead box Q1
mm9_v1_chr8_+_87189015_87189026	0.963714	FOX{I1,J2}.p2	
mm9_v1_chr17_-_22099417_22099430	0.963525	FOX{I1,J2}.p2	BC096765|Zfp942|73233|zinc finger protein 942	AK032425|Zfp942|73233|zinc finger protein 942	NM_001199048|Zfp942|73233|zinc finger protein 942
mm9_v1_chr6_-_97409251_97409295	0.957983	FOX{I1,J2}.p2	AK129262|Frmd4b|232288|FERM domain containing 4B
mm9_v1_chr17_-_86544514_86544514	0.957831	FOX{I1,J2}.p2	AK021298|Srbd1|78586|S1 RNA binding domain 1	NM_030133|Srbd1|78586|S1 RNA binding domain 1
mm9_v1_chr4_+_58298833_58298983	0.957156	FOX{I1,J2}.p2	NM_001037127|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001037128|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001037129|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001037130|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001165996|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_010944|Musk|18198|muscle, skeletal, receptor tyrosine kinase	U37708|Musk|18198|muscle, skeletal, receptor tyrosine kinase	U37709|Musk|18198|muscle, skeletal, receptor tyrosine kinase	BC100342|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY360453|Musk|18198|muscle, skeletal, receptor tyrosine kinase	X86444|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY955296|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY955297|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY955298|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY956403|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY956404|Musk|18198|muscle, skeletal, receptor tyrosine kinase
mm9_v1_chr2_+_164323024_164323043	0.95564	FOX{I1,J2}.p2	NM_133779|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK049171|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK049990|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK019717|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK090020|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK155057|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK153462|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK153464|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK044499|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK157226|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T
mm9_v1_chr2_-_164104007_164104044	0.952848	FOX{I1,J2}.p2	M35732|Svs4|20941|seminal vesicle secretory protein 4	AK020349|Svs4|20941|seminal vesicle secretory protein 4	BC115604|Svs4|20941|seminal vesicle secretory protein 4	BC115605|Svs4|20941|seminal vesicle secretory protein 4	NM_009300|Svs4|20941|seminal vesicle secretory protein 4
mm9_v1_chr6_-_119305193_119305208	0.952483	FOX{I1,J2}.p2	BC030936|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr5_+_130647678_130647743	0.951773	FOX{I1,J2}.p2	NM_001199059|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1	AF093590|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1	AK146734|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr2_-_163896796_163896916	0.950997	FOX{I1,J2}.p2	BC018278|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK011786|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK168329|Tomm34|67145|translocase of outer mitochondrial membrane 34	NM_025996|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK017699|Tomm34|67145|translocase of outer mitochondrial membrane 34	AK075873|Tomm34|67145|translocase of outer mitochondrial membrane 34
mm9_v1_chr6_-_113327472_113327595	0.950834	FOX{I1,J2}.p2	AK180989|Tada3|101206|transcriptional adaptor 3	BC022707|Tada3|101206|transcriptional adaptor 3	BC023879|Tada3|101206|transcriptional adaptor 3	BC026630|Tada3|101206|transcriptional adaptor 3	NM_133932|Tada3|101206|transcriptional adaptor 3
mm9_v1_chr5_-_92757021_92757142	0.950594	FOX{I1,J2}.p2	AK042480|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	CT010194|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	BC003343|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK157109|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK042017|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK156012|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK156029|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK156453|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	AK157118|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	NM_008599|Cxcl9|17329|chemokine (C-X-C motif) ligand 9	M34815|Cxcl9|17329|chemokine (C-X-C motif) ligand 9
mm9_v1_chr11_+_120466611_120466690	0.948611	FOX{I1,J2}.p2	AK003684|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr2_-_101679136_101679136	0.947655	FOX{I1,J2}.p2	NM_001110849|Prr5l|72446|proline rich 5 like
mm9_v1_chr9_+_7272513_7272544	0.947589	FOX{I1,J2}.p2	BC125320|Mmp13|17386|matrix metallopeptidase 13	BC125322|Mmp13|17386|matrix metallopeptidase 13	NM_008607|Mmp13|17386|matrix metallopeptidase 13	AK150728|Mmp13|17386|matrix metallopeptidase 13	AK151626|Mmp13|17386|matrix metallopeptidase 13	AK152916|Mmp13|17386|matrix metallopeptidase 13	AK153458|Mmp13|17386|matrix metallopeptidase 13	AK155188|Mmp13|17386|matrix metallopeptidase 13	AK152507|Mmp13|17386|matrix metallopeptidase 13	AK159921|Mmp13|17386|matrix metallopeptidase 13	AK160819|Mmp13|17386|matrix metallopeptidase 13	X66473|Mmp13|17386|matrix metallopeptidase 13
mm9_v1_chr7_-_17260959_17261053	0.947513	FOX{I1,J2}.p2	BC099491|Ceacam15|101434|carcinoembryonic antigen-related cell adhesion molecule 15	AK049385|Ceacam15|101434|carcinoembryonic antigen-related cell adhesion molecule 15	BC125404|Ceacam15|101434|carcinoembryonic antigen-related cell adhesion molecule 15	BC125406|Ceacam15|101434|carcinoembryonic antigen-related cell adhesion molecule 15	NM_175315|Ceacam15|101434|carcinoembryonic antigen-related cell adhesion molecule 15
mm9_v1_chr16_+_65520846_65520963	0.944731	FOX{I1,J2}.p2	BC061213|Pou1f1|18736|POU domain, class 1, transcription factor 1	D12885|Pou1f1|18736|POU domain, class 1, transcription factor 1	NM_008849|Pou1f1|18736|POU domain, class 1, transcription factor 1	X57512|Pou1f1|18736|POU domain, class 1, transcription factor 1
mm9_v1_chr8_+_4613144_4613169	0.942337	FOX{I1,J2}.p2	BC003267|Zfp958|233987|zinc finger protein 958	AK037596|Zfp958|233987|zinc finger protein 958	AK037083|Zfp958|233987|zinc finger protein 958	NM_145591|Zfp958|233987|zinc finger protein 958
mm9_v1_chr5_+_44260035_44260114	0.940227	FOX{I1,J2}.p2	AK150412|Cd38|12494|CD38 antigen	AK153215|Cd38|12494|CD38 antigen	AK151016|Cd38|12494|CD38 antigen	NM_007646|Cd38|12494|CD38 antigen	AK040498|Cd38|12494|CD38 antigen	AK038439|Cd38|12494|CD38 antigen	BC046312|Cd38|12494|CD38 antigen	AK042970|Cd38|12494|CD38 antigen	AK043442|Cd38|12494|CD38 antigen	AK151918|Cd38|12494|CD38 antigen	AK153334|Cd38|12494|CD38 antigen	L11332|Cd38|12494|CD38 antigen	CT010386|Cd38|12494|CD38 antigen
mm9_v1_chr11_+_62366541_62366592	0.939853	FOX{I1,J2}.p2	AK209901|Ubb|22187|ubiquitin B
mm9_v1_chr3_+_90407688_90407708	0.939373	FOX{I1,J2}.p2	AK160522|S100a4|20198|S100 calcium binding protein A4	D00208|S100a4|20198|S100 calcium binding protein A4	NM_011311|S100a4|20198|S100 calcium binding protein A4	AK003065|S100a4|20198|S100 calcium binding protein A4
mm9_v1_chr8_-_89409079_89409204	0.939277	FOX{I1,J2}.p2	AK134934|N4bp1|80750|NEDD4 binding protein 1	AK172981|N4bp1|80750|NEDD4 binding protein 1	AK147522|N4bp1|80750|NEDD4 binding protein 1	NM_030563|N4bp1|80750|NEDD4 binding protein 1
mm9_v1_chr14_-_73725576_73725603	0.938742	FOX{I1,J2}.p2	AK011246|Rb1|19645|retinoblastoma 1	BC096525|Rb1|19645|retinoblastoma 1	NM_009029|Rb1|19645|retinoblastoma 1
mm9_v1_chr6_+_89971881_89971882	0.937185	FOX{I1,J2}.p2	NM_053219|Vmn1r47|113846|vomeronasal 1 receptor 47	BC111822|Vmn1r47|113846|vomeronasal 1 receptor 47
mm9_v1_chr8_+_42416046_42416071	0.937138	FOX{I1,J2}.p2	AK040482|Pcm1|18536|pericentriolar material 1
mm9_v1_chr17_-_45570655_45570685	0.936872	FOX{I1,J2}.p2	BC031480|Cdc5l|71702|cell division cycle 5-like (S. pombe)	NM_152810|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK004547|Cdc5l|71702|cell division cycle 5-like (S. pombe)
mm9_v1_chr1_+_187311172_187311232	0.936604	FOX{I1,J2}.p2	AK017151|5033404E19Rik|114668|RIKEN cDNA 5033404E19 gene
mm9_v1_chr7_-_11896030_11896030	0.935899	FOX{I1,J2}.p2	NM_001161802|Zscan4e|665848|zinc finger and SCAN domain containing 4E
mm9_v1_chr9_-_13631432_13631439	0.935832	FOX{I1,J2}.p2	AK019414|Cep57|74360|centrosomal protein 57	AK167523|Cep57|74360|centrosomal protein 57
mm9_v1_chr13_-_56583606_56583606	0.934323	FOX{I1,J2}.p2	NM_008373|Il9|16198|interleukin 9	X14045|Il9|16198|interleukin 9
mm9_v1_chr2_+_130230994_130231035	0.934302	FOX{I1,J2}.p2	NM_029375|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene	BC049710|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene	NM_001163483|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene	BC137914|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene	BC137915|1700020A23Rik|75656|RIKEN cDNA 1700020A23 gene
mm9_v1_chr11_+_100931369_100931476	0.932605	FOX{I1,J2}.p2	AK143546|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	NM_013792|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK170758|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK158045|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	AK164125|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	BC055733|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	U85247|Naglu|27419|alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)
mm9_v1_chr12_-_86715612_86715842	0.930739	FOX{I1,J2}.p2	AK150605|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152656|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC064755|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC085097|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK003676|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK084117|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK152643|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	NM_026775|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr15_+_99984826_99984839	0.930722	FOX{I1,J2}.p2	AK030064|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	NM_172819|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	BC137857|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)	BC137858|Dip2b|239667|DIP2 disco-interacting protein 2 homolog B (Drosophila)
mm9_v1_chr2_+_181501718_181501871	0.930096	FOX{I1,J2}.p2	AK165786|Myt1|17932|myelin transcription factor 1	NM_001171616|Myt1|17932|myelin transcription factor 1	NM_008665|Myt1|17932|myelin transcription factor 1	AB082378|Myt1|17932|myelin transcription factor 1	AK082994|Myt1|17932|myelin transcription factor 1
mm9_v1_chr7_-_132635008_132635055	0.930058	FOX{I1,J2}.p2	BC031848|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	BC049558|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	NM_026330|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)
mm9_v1_chr4_-_43512476_43512545	0.929749	FOX{I1,J2}.p2	AK087493|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	BC080700|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	AK153880|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene	NM_001013377|E130306D19Rik|230098|RIKEN cDNA E130306D19 gene
mm9_v1_chr2_+_30271550_30271576	0.928683	FOX{I1,J2}.p2	AK031591|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)	NM_138748|Ppp2r4|110854|protein phosphatase 2A, regulatory subunit B (PR 53)
mm9_v1_chr16_+_17619441_17619473	0.928393	FOX{I1,J2}.p2	AK019466|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164609|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164610|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164611|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_029945|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK031685|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK031029|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK036380|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK035892|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK036055|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK164234|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK129354|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK138720|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK164456|Smpd4|77626|sphingomyelin phosphodiesterase 4	BC026767|Smpd4|77626|sphingomyelin phosphodiesterase 4
mm9_v1_chr19_+_34644768_34644804	0.927841	FOX{I1,J2}.p2	AK150206|Ifit2|15958|interferon-induced protein with tetratricopeptide repeats 2	AK150253|Ifit2|15958|interferon-induced protein with tetratricopeptide repeats 2	U43085|Ifit2|15958|interferon-induced protein with tetratricopeptide repeats 2
mm9_v1_chr5_+_108026714_108026792	0.927717	FOX{I1,J2}.p2	AK034418|Rpap2|231571|RNA polymerase II associated protein 2	AK161901|Rpap2|231571|RNA polymerase II associated protein 2	NM_001163461|Rpap2|231571|RNA polymerase II associated protein 2	NM_144911|Rpap2|231571|RNA polymerase II associated protein 2	AK145830|Rpap2|231571|RNA polymerase II associated protein 2	BC021895|Rpap2|231571|RNA polymerase II associated protein 2	AK166574|Rpap2|231571|RNA polymerase II associated protein 2
mm9_v1_chr11_-_106860803_106860838	0.927445	FOX{I1,J2}.p2	NM_010655|Kpna2|16647|karyopherin (importin) alpha 2
mm9_v1_chrX_-_51100833_51100882	0.925114	FOX{I1,J2}.p2	AK088930|Xlr|22441|X-linked lymphocyte-regulated complex	AK014417|3830403N18Rik|70691|RIKEN cDNA 3830403N18 gene	AK035341|Xlr|22441|X-linked lymphocyte-regulated complex	X07967|Xlr|22441|X-linked lymphocyte-regulated complex	BC005560|Xlr|22441|X-linked lymphocyte-regulated complex	AK012549|Xlr|22441|X-linked lymphocyte-regulated complex	NM_011725|Xlr|22441|X-linked lymphocyte-regulated complex	AK035025|Xlr|22441|X-linked lymphocyte-regulated complex
mm9_v1_chr19_-_5964121_5964180	0.923092	FOX{I1,J2}.p2	BC064795|Pola2|18969|polymerase (DNA directed), alpha 2	D13546|Pola2|18969|polymerase (DNA directed), alpha 2	AK150099|Pola2|18969|polymerase (DNA directed), alpha 2	BC006945|Pola2|18969|polymerase (DNA directed), alpha 2	AK045325|Pola2|18969|polymerase (DNA directed), alpha 2	AK152974|Pola2|18969|polymerase (DNA directed), alpha 2	AK153081|Pola2|18969|polymerase (DNA directed), alpha 2	AK163733|Pola2|18969|polymerase (DNA directed), alpha 2	BC021424|Pola2|18969|polymerase (DNA directed), alpha 2
mm9_v1_chr1_-_71461469_71461483	0.922487	FOX{I1,J2}.p2	AK014713|Abca12|74591|ATP-binding cassette, sub-family A (ABC1), member 12	AK028781|Abca12|74591|ATP-binding cassette, sub-family A (ABC1), member 12	AK029031|Abca12|74591|ATP-binding cassette, sub-family A (ABC1), member 12	NM_175210|Abca12|74591|ATP-binding cassette, sub-family A (ABC1), member 12
mm9_v1_chr6_+_24683244_24683306	0.920592	FOX{I1,J2}.p2	AK016575|Hyal6|74409|hyaluronoglucosaminidase 6	AK030190|Hyal6|74409|hyaluronoglucosaminidase 6	NM_028920|Hyal6|74409|hyaluronoglucosaminidase 6	AK029715|Hyal6|74409|hyaluronoglucosaminidase 6	BC151178|Hyal6|74409|hyaluronoglucosaminidase 6	BC151179|Hyal6|74409|hyaluronoglucosaminidase 6
mm9_v1_chr7_+_50469408_50469408	0.918907	FOX{I1,J2}.p2	EU599041|EU599041|100170401|expressed sequence EU599041	EU599042|EU599041|100170401|expressed sequence EU599041	NM_001177525|EU599041|100170401|expressed sequence EU599041
mm9_v1_chr4_-_139523940_139523940	0.917949	FOX{I1,J2}.p2	AK045732|Klhdc7a|242721|kelch domain containing 7A	NM_173427|Klhdc7a|242721|kelch domain containing 7A
mm9_v1_chr7_+_50606710_50606917	0.917692	FOX{I1,J2}.p2	AK087658|Siglec5|233186|sialic acid binding Ig-like lectin 5	AK155469|Siglec5|233186|sialic acid binding Ig-like lectin 5	AF293371|Siglec5|233186|sialic acid binding Ig-like lectin 5	NM_145581|Siglec5|233186|sialic acid binding Ig-like lectin 5	AK146203|Siglec5|233186|sialic acid binding Ig-like lectin 5	BC145038|Siglec5|233186|sialic acid binding Ig-like lectin 5	BC145987|Siglec5|233186|sialic acid binding Ig-like lectin 5	AY210401|Siglec5|233186|sialic acid binding Ig-like lectin 5
mm9_v1_chr9_+_110785214_110785331	0.917134	FOX{I1,J2}.p2	BC117928|Als2cl|235633|ALS2 C-terminal like	BC117929|Als2cl|235633|ALS2 C-terminal like	AF481142|Als2cl|235633|ALS2 C-terminal like
mm9_v1_chr6_-_89890500_89890500	0.916404	FOX{I1,J2}.p2	NM_011684|Vmn1r45|22297|vomeronasal 1 receptor 45
mm9_v1_chr2_-_89892475_89892478	0.916302	FOX{I1,J2}.p2	BC111111|Olfr140|57272|olfactory receptor 140	BC141888|Olfr140|57272|olfactory receptor 140	NM_020515|Olfr140|57272|olfactory receptor 140
mm9_v1_chr5_+_34974750_34974884	0.916203	FOX{I1,J2}.p2	
mm9_v1_chr13_+_31650033_31650038	0.91596	FOX{I1,J2}.p2	AK147202|Foxq1|15220|forkhead box Q1	NM_008239|Foxq1|15220|forkhead box Q1
mm9_v1_chr11_+_20443315_20443422	0.915609	FOX{I1,J2}.p2	AB041541|Sertad2|58172|SERTA domain containing 2	BC014726|Sertad2|58172|SERTA domain containing 2
mm9_v1_chr2_-_9800100_9800104	0.915418	FOX{I1,J2}.p2	AK157939|Gata3|14462|GATA binding protein 3	AK161099|Gata3|14462|GATA binding protein 3
mm9_v1_chr6_-_23600205_23600304	0.913982	FOX{I1,J2}.p2	BC116423|Rnf133|386611|ring finger protein 133	BC116424|Rnf133|386611|ring finger protein 133	AK028082|Rnf133|386611|ring finger protein 133	NM_198251|Rnf133|386611|ring finger protein 133
mm9_v1_chr12_-_106236886_106236886	0.912802	FOX{I1,J2}.p2	BC099694|4831426I19Rik|212073|RIKEN cDNA 4831426I19 gene	NM_001042699|4831426I19Rik|212073|RIKEN cDNA 4831426I19 gene
mm9_v1_chr16_-_20610796_20610837	0.911483	FOX{I1,J2}.p2	BC031893|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)	AK090067|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)	AK149510|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)	NM_145939|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)
mm9_v1_chr12_+_60232417_60232447	0.911153	FOX{I1,J2}.p2	AK157358|Ctage5|217615|CTAGE family, member 5	NM_001165253|Ctage5|217615|CTAGE family, member 5
mm9_v1_chr10_-_33927262_33927356	0.909727	FOX{I1,J2}.p2	AK045065|Dse|212898|dermatan sulfate epimerase	BC053095|Dse|212898|dermatan sulfate epimerase	NM_172508|Dse|212898|dermatan sulfate epimerase
mm9_v1_chr7_+_25421551_25421577	0.90965	FOX{I1,J2}.p2	BC094282|Lypd3|72434|Ly6/Plaur domain containing 3	AK009998|Lypd3|72434|Ly6/Plaur domain containing 3
mm9_v1_chr15_+_25870456_25870763	0.904932	FOX{I1,J2}.p2	AK167327|Fam134b|66270|family with sequence similarity 134, member B	AK146972|Fam134b|66270|family with sequence similarity 134, member B	BC019494|Fam134b|66270|family with sequence similarity 134, member B	NM_025459|Fam134b|66270|family with sequence similarity 134, member B	BC054415|Fam134b|66270|family with sequence similarity 134, member B
mm9_v1_chrX_+_75983101_75983130	0.904078	FOX{I1,J2}.p2	AK014848|Fam47a-ps|70864|family with sequence similarity 47, member A, pseudogene	NM_001164739|Fam47a-ps|70864|family with sequence similarity 47, member A, pseudogene	BC115971|Fam47a-ps|70864|family with sequence similarity 47, member A, pseudogene
mm9_v1_chr1_+_136859153_136859176	0.903495	FOX{I1,J2}.p2	AK021213|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)	NM_026024|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)	AK166098|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)
mm9_v1_chr13_+_20886162_20886262	0.902132	FOX{I1,J2}.p2	AK171572|Aoah|27052|acyloxyacyl hydrolase	BC150767|Aoah|27052|acyloxyacyl hydrolase	CT010242|Aoah|27052|acyloxyacyl hydrolase
mm9_v1_chr17_-_20185168_20185168	0.90171	FOX{I1,J2}.p2	NM_001104566|Vmn2r104|22313|vomeronasal 2, receptor 104
mm9_v1_chr7_-_25230700_25230700	0.90019	FOX{I1,J2}.p2	AK089224|Irgc1|210145|immunity-related GTPase family, cinema 1	NM_199013|Irgc1|210145|immunity-related GTPase family, cinema 1
mm9_v1_chr12_-_115286643_115286977	0.900097	FOX{I1,J2}.p2	M35502|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	M37557|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	M37558|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	M37559|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	M37560|Igh-V11|16051|immunoglobulin heavy chain (V11 family)	Y00743|Igh-V11|16051|immunoglobulin heavy chain (V11 family)
mm9_v1_chr13_-_67552515_67552559	0.899929	FOX{I1,J2}.p2	BC080824|Zfp874a|238692|zinc finger protein 874a	AK136394|Zfp874a|238692|zinc finger protein 874a	AK049183|Zfp874a|238692|zinc finger protein 874a	AK145787|Zfp874a|238692|zinc finger protein 874a	NM_177712|Zfp874a|238692|zinc finger protein 874a
mm9_v1_chr19_+_8816292_8816349	0.895664	FOX{I1,J2}.p2	AK166087|Stx5a|56389|syntaxin 5A	NM_019829|Stx5a|56389|syntaxin 5A	BC021883|Stx5a|56389|syntaxin 5A
mm9_v1_chr7_-_36103433_36103463	0.893758	FOX{I1,J2}.p2	BC100577|Gpatch1|67471|G patch domain containing 1	AK154571|Gpatch1|67471|G patch domain containing 1	AK014367|Gpatch1|67471|G patch domain containing 1	BC125584|Gpatch1|67471|G patch domain containing 1	BC132155|Gpatch1|67471|G patch domain containing 1	AK004868|Gpatch1|67471|G patch domain containing 1	NM_026181|Gpatch1|67471|G patch domain containing 1
mm9_v1_chr1_-_65003291_65003407	0.893493	FOX{I1,J2}.p2	AK034959|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	BC063098|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	NM_001039493|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3
mm9_v1_chr11_-_4494790_4494809	0.893283	FOX{I1,J2}.p2	BC032166|Mtmr3|74302|myotubularin related protein 3	AK141138|Mtmr3|74302|myotubularin related protein 3	BC081544|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr13_-_19789619_19789628	0.892489	FOX{I1,J2}.p2	AF548543|Txndc3|73412|thioredoxin domain containing 3 (spermatozoa)	AK006819|Txndc3|73412|thioredoxin domain containing 3 (spermatozoa)	BC052356|Txndc3|73412|thioredoxin domain containing 3 (spermatozoa)	NM_001167909|Txndc3|73412|thioredoxin domain containing 3 (spermatozoa)	NM_181591|Txndc3|73412|thioredoxin domain containing 3 (spermatozoa)
mm9_v1_chr15_-_75672300_75672387	0.892137	FOX{I1,J2}.p2	BC060682|Zc3h3|223642|zinc finger CCCH type containing 3	AJ516034|Zc3h3|223642|zinc finger CCCH type containing 3	BC111448|Zc3h3|223642|zinc finger CCCH type containing 3	NM_172121|Zc3h3|223642|zinc finger CCCH type containing 3	AK138281|Zc3h3|223642|zinc finger CCCH type containing 3
mm9_v1_chr8_+_74012001_74012001	0.891937	FOX{I1,J2}.p2	AF361482|Gtpbp3|70359|GTP binding protein 3	NM_032544|Gtpbp3|70359|GTP binding protein 3
mm9_v1_chr2_+_119456102_119456195	0.890506	FOX{I1,J2}.p2	BC009096|Nusap1|108907|nucleolar and spindle associated protein 1
mm9_v1_chr12_-_114665550_114665585	0.888351	FOX{I1,J2}.p2	AK134155|Ighg|380794|Immunoglobulin heavy chain (gamma polypeptide)
mm9_v1_chr15_-_103395483_103395508	0.888204	FOX{I1,J2}.p2	M93428|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	BC145548|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	BC145832|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	BC145858|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	BC031931|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	AK021358|Glycam1|14663|glycosylation dependent cell adhesion molecule 1	NM_008134|Glycam1|14663|glycosylation dependent cell adhesion molecule 1
mm9_v1_chr4_+_130219281_130219296	0.887827	FOX{I1,J2}.p2	AK163977|Pum1|80912|pumilio 1 (Drosophila)	AK122205|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr9_-_19976012_19976012	0.887251	FOX{I1,J2}.p2	NM_146904|Olfr870|57251|olfactory receptor 870
mm9_v1_chr2_+_152398479_152398479	0.886657	FOX{I1,J2}.p2	AK076875|Defb21|403172|defensin beta 21	DQ012032|Defb21|403172|defensin beta 21	NM_207276|Defb21|403172|defensin beta 21
mm9_v1_chr17_+_36016712_36016724	0.886634	FOX{I1,J2}.p2	NM_026987|Dhx16|69192|DEAH (Asp-Glu-Ala-His) box polypeptide 16
mm9_v1_chr9_-_57468501_57468580	0.886267	FOX{I1,J2}.p2	AB211986|Lman1l|235416|lectin, mannose-binding 1 like	BC020188|Lman1l|235416|lectin, mannose-binding 1 like	NM_199222|Lman1l|235416|lectin, mannose-binding 1 like
mm9_v1_chr2_-_87875293_87875294	0.882499	FOX{I1,J2}.p2	AB061228|Olfr73|117004|olfactory receptor 73	NM_054090|Olfr73|117004|olfactory receptor 73	BC140145|Olfr73|117004|olfactory receptor 73	BC143167|Olfr73|117004|olfactory receptor 73	BC146832|Olfr73|117004|olfactory receptor 73
mm9_v1_chr3_-_153574996_153575274	0.881335	FOX{I1,J2}.p2	AK160162|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC003948|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC021335|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	AF231926|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	U12922|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC132473|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC138547|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145323|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145324|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145325|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145326|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	NM_011231|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC057661|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit
mm9_v1_chr8_-_3279545_3279616	0.878702	FOX{I1,J2}.p2	AK052187|Insr|16337|insulin receptor	NM_010568|Insr|16337|insulin receptor
mm9_v1_chr11_+_75813413_75813528	0.877456	FOX{I1,J2}.p2	NM_198637|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	BC049758|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	AK006044|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene	AK132806|1700016K19Rik|74230|RIKEN cDNA 1700016K19 gene
mm9_v1_chr6_+_127022919_127023047	0.875251	FOX{I1,J2}.p2	AK155687|Fgf23|64654|fibroblast growth factor 23	NM_022657|Fgf23|64654|fibroblast growth factor 23	AF263536|Fgf23|64654|fibroblast growth factor 23	BC120605|Fgf23|64654|fibroblast growth factor 23	AB037889|Fgf23|64654|fibroblast growth factor 23
mm9_v1_chr2_+_84499235_84499235	0.874876	FOX{I1,J2}.p2	NM_001145100|Gm13718|100270744|predicted gene 13718
mm9_v1_chr9_+_123936700_123936876	0.874831	FOX{I1,J2}.p2	AK041106|Ccr3|12771|chemokine (C-C motif) receptor 3	AK089875|Ccr3|12771|chemokine (C-C motif) receptor 3	NM_009914|Ccr3|12771|chemokine (C-C motif) receptor 3	AK153518|Ccr3|12771|chemokine (C-C motif) receptor 3	AK089895|Ccr3|12771|chemokine (C-C motif) receptor 3	BC108967|Ccr3|12771|chemokine (C-C motif) receptor 3	BC108968|Ccr3|12771|chemokine (C-C motif) receptor 3
mm9_v1_chr11_-_51414597_51414704	0.874754	FOX{I1,J2}.p2	AK193201|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK196074|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B	AK186800|Hnrnpab|15384|heterogeneous nuclear ribonucleoprotein A/B
mm9_v1_chr8_+_77517536_77517607	0.874535	FOX{I1,J2}.p2	AK156670|Hmgxb4|70823|HMG box domain containing 4	AK014640|Hmgxb4|70823|HMG box domain containing 4	BC048188|Hmgxb4|70823|HMG box domain containing 4	BC049800|Hmgxb4|70823|HMG box domain containing 4	NM_178017|Hmgxb4|70823|HMG box domain containing 4	BC023721|Hmgxb4|70823|HMG box domain containing 4
mm9_v1_chr1_-_58558259_58558259	0.874351	FOX{I1,J2}.p2	AB190256|Orc2|18393|origin recognition complex, subunit 2	NM_001025378|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chrX_-_3243543_3243628	0.871945	FOX{I1,J2}.p2	NM_001099643|Gm3750|100042254|predicted gene 3750	AB055855|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AB055856|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	BC115962|Gm2933|100040732|predicted gene 2933	AB055854|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	AK006065|Gmcl1l|71847|germ cell-less homolog 1 (Drosophila)-like	NM_001085545|Gm14345|630022|predicted gene 14345	NM_001085551|Gm14346|668958|predicted gene 14346	NM_001085552|Gm14351|668960|predicted gene 14351
mm9_v1_chr2_+_136716953_136716953	0.871463	FOX{I1,J2}.p2	AK010392|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	NM_028201|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene
mm9_v1_chr3_+_87710187_87710249	0.87055	FOX{I1,J2}.p2	NM_008231|Hdgf|15191|hepatoma-derived growth factor
mm9_v1_chr10_+_19890580_19890589	0.870326	FOX{I1,J2}.p2	AK138516|1700026H06Rik|70376|RIKEN cDNA 1700026H06 gene	AK138667|1700026H06Rik|70376|RIKEN cDNA 1700026H06 gene
mm9_v1_chr4_-_132288396_132288408	0.869688	FOX{I1,J2}.p2	BC057035|Xkr8|381560|X Kell blood group precursor related family member 8 homolog
mm9_v1_chr14_-_73785035_73785066	0.86934	FOX{I1,J2}.p2	AK002599|Itm2b|16432|integral membrane protein 2B	AK153103|Itm2b|16432|integral membrane protein 2B	AK159307|Itm2b|16432|integral membrane protein 2B	AK003224|Itm2b|16432|integral membrane protein 2B	BC004731|Itm2b|16432|integral membrane protein 2B	AK003587|Itm2b|16432|integral membrane protein 2B	AK003928|Itm2b|16432|integral membrane protein 2B	AK088270|Itm2b|16432|integral membrane protein 2B	AK159340|Itm2b|16432|integral membrane protein 2B	AK159426|Itm2b|16432|integral membrane protein 2B	AK159628|Itm2b|16432|integral membrane protein 2B	AK159792|Itm2b|16432|integral membrane protein 2B	AK160101|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr17_+_21787557_21787638	0.869314	FOX{I1,J2}.p2	NM_001166497|3110052M02Rik|73229|RIKEN cDNA 3110052M02 gene	AK014206|3110052M02Rik|73229|RIKEN cDNA 3110052M02 gene	AK155999|3110052M02Rik|73229|RIKEN cDNA 3110052M02 gene	AK161479|3110052M02Rik|73229|RIKEN cDNA 3110052M02 gene	AK084271|3110052M02Rik|73229|RIKEN cDNA 3110052M02 gene	AK148845|3110052M02Rik|73229|RIKEN cDNA 3110052M02 gene
mm9_v1_chr1_-_4775745_4775806	0.869001	FOX{I1,J2}.p2	AK019249|Mrpl15|27395|mitochondrial ribosomal protein L15	AK019244|Mrpl15|27395|mitochondrial ribosomal protein L15	AK160660|Mrpl15|27395|mitochondrial ribosomal protein L15	AK010474|Mrpl15|27395|mitochondrial ribosomal protein L15	AK017824|Mrpl15|27395|mitochondrial ribosomal protein L15	AK011775|Mrpl15|27395|mitochondrial ribosomal protein L15	AK019175|Mrpl15|27395|mitochondrial ribosomal protein L15	AK003026|Mrpl15|27395|mitochondrial ribosomal protein L15	AK017804|Mrpl15|27395|mitochondrial ribosomal protein L15	AK017820|Mrpl15|27395|mitochondrial ribosomal protein L15	AK003367|Mrpl15|27395|mitochondrial ribosomal protein L15	BC068230|Mrpl15|27395|mitochondrial ribosomal protein L15	BC021304|Mrpl15|27395|mitochondrial ribosomal protein L15	BC027233|Mrpl15|27395|mitochondrial ribosomal protein L15	AK010604|Mrpl15|27395|mitochondrial ribosomal protein L15	AK150880|Mrpl15|27395|mitochondrial ribosomal protein L15	NM_001177658|Mrpl15|27395|mitochondrial ribosomal protein L15	NM_025300|Mrpl15|27395|mitochondrial ribosomal protein L15
mm9_v1_chr6_+_56935288_56935335	0.868343	FOX{I1,J2}.p2	BC138068|Vmn1r5|171192|vomeronasal 1 receptor 5	BC138069|Vmn1r5|171192|vomeronasal 1 receptor 5	NM_134174|Vmn1r5|171192|vomeronasal 1 receptor 5
mm9_v1_chr2_-_119613164_119613274	0.866747	FOX{I1,J2}.p2	BC117973|Rpap1|68925|RNA polymerase II associated protein 1	BC117974|Rpap1|68925|RNA polymerase II associated protein 1	AK190910|Rpap1|68925|RNA polymerase II associated protein 1	AK122505|Rpap1|68925|RNA polymerase II associated protein 1	BC088899|Rpap1|68925|RNA polymerase II associated protein 1	AK171233|Rpap1|68925|RNA polymerase II associated protein 1	AK042776|Rpap1|68925|RNA polymerase II associated protein 1	AK154007|Rpap1|68925|RNA polymerase II associated protein 1	AK161487|Rpap1|68925|RNA polymerase II associated protein 1	AK164658|Rpap1|68925|RNA polymerase II associated protein 1	AK166232|Rpap1|68925|RNA polymerase II associated protein 1	AK167589|Rpap1|68925|RNA polymerase II associated protein 1	NM_001163701|Rpap1|68925|RNA polymerase II associated protein 1	NM_177294|Rpap1|68925|RNA polymerase II associated protein 1
mm9_v1_chr2_+_80457201_80457422	0.865662	FOX{I1,J2}.p2	AF237618|Dusp19|68082|dual specificity phosphatase 19	NM_024438|Dusp19|68082|dual specificity phosphatase 19	AK010127|Dusp19|68082|dual specificity phosphatase 19	AK077871|Dusp19|68082|dual specificity phosphatase 19	AK170170|Dusp19|68082|dual specificity phosphatase 19	AK018369|Dusp19|68082|dual specificity phosphatase 19	AB051896|Dusp19|68082|dual specificity phosphatase 19	AK049927|Dusp19|68082|dual specificity phosphatase 19	AB038769|Dusp19|68082|dual specificity phosphatase 19	BC021591|Dusp19|68082|dual specificity phosphatase 19	AK083610|Dusp19|68082|dual specificity phosphatase 19
mm9_v1_chr5_-_135825744_135825913	0.865562	FOX{I1,J2}.p2	AY029192|Fkbp6|94244|FK506 binding protein 6	AF367710|Fkbp6|94244|FK506 binding protein 6	AF367711|Fkbp6|94244|FK506 binding protein 6	NM_033571|Fkbp6|94244|FK506 binding protein 6	AF367709|Fkbp6|94244|FK506 binding protein 6	AK090036|Fkbp6|94244|FK506 binding protein 6	BC139092|Fkbp6|94244|FK506 binding protein 6	BC139097|Fkbp6|94244|FK506 binding protein 6
mm9_v1_chr1_-_14299936_14300280	0.865555	FOX{I1,J2}.p2	BC066860|Eya1|14048|eyes absent 1 homolog (Drosophila)	AK045320|Eya1|14048|eyes absent 1 homolog (Drosophila)	AK042412|Eya1|14048|eyes absent 1 homolog (Drosophila)	BC060260|Eya1|14048|eyes absent 1 homolog (Drosophila)	NM_010164|Eya1|14048|eyes absent 1 homolog (Drosophila)	AK153788|Eya1|14048|eyes absent 1 homolog (Drosophila)
mm9_v1_chr10_+_127691240_127691249	0.865508	FOX{I1,J2}.p2	BC034832|Apon|28194|apolipoprotein N
mm9_v1_chr18_+_37649118_37649272	0.865367	FOX{I1,J2}.p2	AK140341|Pcdhb18|93889|protocadherin beta 18	NM_053143|Pcdhb18|93889|protocadherin beta 18	BC099958|Pcdhb18|93889|protocadherin beta 18	AY013779|Pcdhb18|93889|protocadherin beta 18
mm9_v1_chr16_-_16073490_16073537	0.864223	FOX{I1,J2}.p2	AK170784|2310008H04Rik|224008|RIKEN cDNA 2310008H04 gene
mm9_v1_chr17_-_87827021_87827080	0.863204	FOX{I1,J2}.p2	AK005861|1700011E24Rik|75467|RIKEN cDNA 1700011E24 gene	NM_029298|1700011E24Rik|75467|RIKEN cDNA 1700011E24 gene
mm9_v1_chr11_-_58426971_58426993	0.86082	FOX{I1,J2}.p2	BC019553|2210407C18Rik|78354|RIKEN cDNA 2210407C18 gene	NM_144544|2210407C18Rik|78354|RIKEN cDNA 2210407C18 gene
mm9_v1_chr7_-_34987169_34987529	0.86076	FOX{I1,J2}.p2	
mm9_v1_chr1_-_18127131_18127131	0.86032	FOX{I1,J2}.p2	AY705449|Crisp4|78081|cysteine-rich secretory protein 4	NM_030033|Crisp4|78081|cysteine-rich secretory protein 4
mm9_v1_chr1_+_182837982_182838044	0.859134	FOX{I1,J2}.p2	AK187139|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2
mm9_v1_chr6_+_122999979_123000091	0.859061	FOX{I1,J2}.p2	NM_001190310|Clec4b1|69810|C-type lectin domain family 4, member b1	NM_027218|Clec4b1|69810|C-type lectin domain family 4, member b1	AY230259|Clec4b1|69810|C-type lectin domain family 4, member b1	AY230260|Clec4b1|69810|C-type lectin domain family 4, member b1	AK007794|Clec4b1|69810|C-type lectin domain family 4, member b1	AY365134|Clec4b1|69810|C-type lectin domain family 4, member b1
mm9_v1_chr11_+_121462932_121463055	0.858245	FOX{I1,J2}.p2	AK020695|Tbcd|108903|tubulin-specific chaperone d	AK075908|Tbcd|108903|tubulin-specific chaperone d
mm9_v1_chr19_-_10557362_10557417	0.857845	FOX{I1,J2}.p2	BC118523|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AY032666|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	NM_133689|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AK005821|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene	AK016325|4930579J09Rik|67752|RIKEN cDNA 4930579J09 gene
mm9_v1_chr9_-_61761227_61761271	0.857076	FOX{I1,J2}.p2	AK203941|Rplp1|56040|ribosomal protein, large, P1
mm9_v1_chr4_-_49857641_49857765	0.857056	FOX{I1,J2}.p2	AK173314|Grin3a|242443|glutamate receptor ionotropic, NMDA3A
mm9_v1_chr15_-_36094462_36094638	0.856682	FOX{I1,J2}.p2	AK030012|Fbxo43|78803|F-box protein 43	AK019714|Fbxo43|78803|F-box protein 43	BC098484|Fbxo43|78803|F-box protein 43	NM_001081253|Fbxo43|78803|F-box protein 43
mm9_v1_chr15_+_27396405_27396728	0.855195	FOX{I1,J2}.p2	AK083135|Ank|11732|progressive ankylosis	DQ832285|Ank|11732|progressive ankylosis	NM_020332|Ank|11732|progressive ankylosis	BC042644|Ank|11732|progressive ankylosis	BC054379|Ank|11732|progressive ankylosis	AK148070|Ank|11732|progressive ankylosis	AF001532|Ank|11732|progressive ankylosis	AF274752|Ank|11732|progressive ankylosis
mm9_v1_chr9_-_78226334_78226394	0.854528	FOX{I1,J2}.p2	AB283026|Ooep|67968|oocyte expressed protein homolog (dog)	BC062245|Ooep|67968|oocyte expressed protein homolog (dog)	AK133554|Ooep|67968|oocyte expressed protein homolog (dog)	AK135950|Ooep|67968|oocyte expressed protein homolog (dog)	AK136199|Ooep|67968|oocyte expressed protein homolog (dog)	AK145510|Ooep|67968|oocyte expressed protein homolog (dog)	AK010266|Ooep|67968|oocyte expressed protein homolog (dog)	AK010809|Ooep|67968|oocyte expressed protein homolog (dog)	DQ238107|Ooep|67968|oocyte expressed protein homolog (dog)	NM_026480|Ooep|67968|oocyte expressed protein homolog (dog)
mm9_v1_chr3_-_86352170_86352368	0.854075	FOX{I1,J2}.p2	BC046628|Mab21l2|23937|mab-21-like 2 (C. elegans)	AK053645|Mab21l2|23937|mab-21-like 2 (C. elegans)	NM_011839|Mab21l2|23937|mab-21-like 2 (C. elegans)	BC058730|Mab21l2|23937|mab-21-like 2 (C. elegans)	AK144373|Mab21l2|23937|mab-21-like 2 (C. elegans)
mm9_v1_chr15_-_39688931_39689018	0.853802	FOX{I1,J2}.p2	AF227731|Dpys|64705|dihydropyrimidinase	BC037086|Dpys|64705|dihydropyrimidinase	AF249296|Dpys|64705|dihydropyrimidinase	AK004899|Dpys|64705|dihydropyrimidinase	AK004822|Dpys|64705|dihydropyrimidinase	NM_001164466|Dpys|64705|dihydropyrimidinase	NM_022722|Dpys|64705|dihydropyrimidinase
mm9_v1_chr11_-_5607667_5607715	0.851951	FOX{I1,J2}.p2	BC029262|Mrps24|64660|mitochondrial ribosomal protein S24	AK010590|Mrps24|64660|mitochondrial ribosomal protein S24	AK003117|Mrps24|64660|mitochondrial ribosomal protein S24	AK007338|Mrps24|64660|mitochondrial ribosomal protein S24	AK014099|Mrps24|64660|mitochondrial ribosomal protein S24	AK012461|Mrps24|64660|mitochondrial ribosomal protein S24	NM_026080|Mrps24|64660|mitochondrial ribosomal protein S24
mm9_v1_chr6_-_135260380_135260422	0.849805	FOX{I1,J2}.p2	AF307146|Pbp2|76400|phosphatidylethanolamine binding protein 2	AF307147|Pbp2|76400|phosphatidylethanolamine binding protein 2	BC107334|Pbp2|76400|phosphatidylethanolamine binding protein 2	BC107335|Pbp2|76400|phosphatidylethanolamine binding protein 2	NM_029595|Pbp2|76400|phosphatidylethanolamine binding protein 2	AK006258|Pbp2|76400|phosphatidylethanolamine binding protein 2
mm9_v1_chr14_-_58535467_58535641	0.848869	FOX{I1,J2}.p2	AK215594|Efha1|68514|EF hand domain family A1	AK219744|Efha1|68514|EF hand domain family A1	AK218511|Efha1|68514|EF hand domain family A1	AK180563|Efha1|68514|EF hand domain family A1	AK208098|Efha1|68514|EF hand domain family A1	AK218370|Efha1|68514|EF hand domain family A1	AK218406|Efha1|68514|EF hand domain family A1	AK218526|Efha1|68514|EF hand domain family A1
mm9_v1_chr1_+_34592492_34592534	0.847012	FOX{I1,J2}.p2	NM_007685|Cfc1|12627|cripto, FRL-1, cryptic family 1	U57720|Cfc1|12627|cripto, FRL-1, cryptic family 1	BC100705|Cfc1|12627|cripto, FRL-1, cryptic family 1	BC100706|Cfc1|12627|cripto, FRL-1, cryptic family 1	BC100708|Cfc1|12627|cripto, FRL-1, cryptic family 1	BC100711|Cfc1|12627|cripto, FRL-1, cryptic family 1
mm9_v1_chr16_+_23609986_23610176	0.845259	FOX{I1,J2}.p2	NM_023386|Rtp4|67775|receptor transporter protein 4	AK018021|Rtp4|67775|receptor transporter protein 4	AJ251364|Rtp4|67775|receptor transporter protein 4	AK007477|Rtp4|67775|receptor transporter protein 4	BC024872|Rtp4|67775|receptor transporter protein 4	AY562228|Rtp4|67775|receptor transporter protein 4
mm9_v1_chr4_+_141102699_141102736	0.844851	FOX{I1,J2}.p2	AK082239|B330016D10Rik|320456|RIKEN cDNA B330016D10 gene	AK043314|B330016D10Rik|320456|RIKEN cDNA B330016D10 gene	AK148126|B330016D10Rik|320456|RIKEN cDNA B330016D10 gene
mm9_v1_chr17_-_79306331_79306331	0.844578	FOX{I1,J2}.p2	NM_001163625|Sult6b1|73671|sulfotransferase family, cytosolic, 6B, member 1
mm9_v1_chr18_-_32297813_32297870	0.844125	FOX{I1,J2}.p2	AF318182|Proc|19123|protein C	BC013896|Proc|19123|protein C	NM_001042768|Proc|19123|protein C	NM_008934|Proc|19123|protein C
mm9_v1_chr2_-_131000485_131000584	0.843118	FOX{I1,J2}.p2	BC006046|Spef1|70997|sperm flagellar 1	AK047675|Spef1|70997|sperm flagellar 1	NM_027641|Spef1|70997|sperm flagellar 1	AY860964|Spef1|70997|sperm flagellar 1	AK016476|Spef1|70997|sperm flagellar 1
mm9_v1_chr8_+_85689250_85689250	0.842866	FOX{I1,J2}.p2	AK049049|Tbc1d9|71310|TBC1 domain family, member 9	NM_001111304|Tbc1d9|71310|TBC1 domain family, member 9	NM_027758|Tbc1d9|71310|TBC1 domain family, member 9
mm9_v1_chr2_-_28477437_28477507	0.842448	FOX{I1,J2}.p2	BC132365|Gfi1b|14582|growth factor independent 1B	BC132367|Gfi1b|14582|growth factor independent 1B	BC145238|Gfi1b|14582|growth factor independent 1B	AF017275|Gfi1b|14582|growth factor independent 1B	BC052654|Gfi1b|14582|growth factor independent 1B	NM_001160406|Gfi1b|14582|growth factor independent 1B	NM_008114|Gfi1b|14582|growth factor independent 1B	AK157262|Gfi1b|14582|growth factor independent 1B
mm9_v1_chr14_-_64127928_64127993	0.842018	FOX{I1,J2}.p2	BC058860|Tdh|58865|L-threonine dehydrogenase	NM_021480|Tdh|58865|L-threonine dehydrogenase
mm9_v1_chr9_+_109778051_109778082	0.841379	FOX{I1,J2}.p2	AK077991|Cdc25a|12530|cell division cycle 25 homolog A (S. pombe)	NM_007658|Cdc25a|12530|cell division cycle 25 homolog A (S. pombe)
mm9_v1_chr5_+_3543815_3543891	0.840885	FOX{I1,J2}.p2	AK008115|Fam133b|68152|family with sequence similarity 133, member B	AK019188|Fam133b|68152|family with sequence similarity 133, member B	NM_001042501|Fam133b|68152|family with sequence similarity 133, member B	AK020011|Fam133b|68152|family with sequence similarity 133, member B	BC147310|Fam133b|68152|family with sequence similarity 133, member B	BC147311|Fam133b|68152|family with sequence similarity 133, member B	BC172033|Fam133b|68152|family with sequence similarity 133, member B	BC027051|Fam133b|68152|family with sequence similarity 133, member B	AK161505|Fam133b|68152|family with sequence similarity 133, member B
mm9_v1_chrX_+_131135770_131135834	0.840853	FOX{I1,J2}.p2	AK141861|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK164115|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK168116|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	BC005461|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK169104|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	AK077716|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2	NM_019868|Hnrnph2|56258|heterogeneous nuclear ribonucleoprotein H2
mm9_v1_chr11_-_62190182_62190262	0.840794	FOX{I1,J2}.p2	AB093281|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr12_-_86039703_86039802	0.840156	FOX{I1,J2}.p2	AY993933|Tmem90a|627191|transmembrane protein 90a	AK140195|Tmem90a|627191|transmembrane protein 90a	NM_001033334|Tmem90a|627191|transmembrane protein 90a	AY993934|Tmem90a|627191|transmembrane protein 90a
mm9_v1_chr4_+_115845976_115845999	0.839755	FOX{I1,J2}.p2	AK006685|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene	NM_001099295|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene	AK018884|1700042G07Rik|67323|RIKEN cDNA 1700042G07 gene
mm9_v1_chr7_-_90943328_90943348	0.836474	FOX{I1,J2}.p2	BC048079|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	AK006375|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	BC061016|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	NM_029335|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene
mm9_v1_chr7_+_97177668_97177676	0.830664	FOX{I1,J2}.p2	AK165252|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK157435|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK046045|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene
mm9_v1_chr6_-_72849701_72849794	0.830559	FOX{I1,J2}.p2	AK142436|Kcmf1|74287|potassium channel modulatory factor 1	BC043330|Kcmf1|74287|potassium channel modulatory factor 1	BC029325|Kcmf1|74287|potassium channel modulatory factor 1
mm9_v1_chr6_-_33010151_33010266	0.83047	FOX{I1,J2}.p2	AK003519|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	NM_025336|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	BC032987|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK145337|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK006643|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	BC021941|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK050063|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK002263|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3	AK002889|Chchd3|66075|coiled-coil-helix-coiled-coil-helix domain containing 3
mm9_v1_chr9_-_118059275_118059324	0.82997	FOX{I1,J2}.p2	AK008567|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)	BC048547|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)
mm9_v1_chr6_+_30459848_30459899	0.829335	FOX{I1,J2}.p2	AK006038|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene	NM_027073|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene	BC049755|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene
mm9_v1_chr12_-_56403648_56403785	0.828984	FOX{I1,J2}.p2	AK017550|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK013403|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	BC138295|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	BC138296|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AJ238247|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK087572|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK015746|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK040589|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK088240|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK028254|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma
mm9_v1_chr11_-_72609515_72609577	0.828691	FOX{I1,J2}.p2	AK138991|Cyb5d2|192986|cytochrome b5 domain containing 2	AK034043|Cyb5d2|192986|cytochrome b5 domain containing 2	AK080730|Cyb5d2|192986|cytochrome b5 domain containing 2
mm9_v1_chr2_+_131059825_131059889	0.826652	FOX{I1,J2}.p2	BC020006|Mavs|228607|mitochondrial antiviral signaling protein	AK085038|Mavs|228607|mitochondrial antiviral signaling protein	BC025825|Mavs|228607|mitochondrial antiviral signaling protein	NM_144888|Mavs|228607|mitochondrial antiviral signaling protein	BC031352|Mavs|228607|mitochondrial antiviral signaling protein
mm9_v1_chr19_-_12840121_12840121	0.826084	FOX{I1,J2}.p2	BC027539|Cntf|12803|ciliary neurotrophic factor	NM_170786|Cntf|12803|ciliary neurotrophic factor
mm9_v1_chrX_-_154036606_154036649	0.826055	FOX{I1,J2}.p2	AK148325|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2	NM_172307|Mbtps2|270669|membrane-bound transcription factor peptidase, site 2
mm9_v1_chr2_+_110561733_110561771	0.824909	FOX{I1,J2}.p2	AY198336|Muc15|269328|mucin 15	AK052840|Muc15|269328|mucin 15	AK142590|Muc15|269328|mucin 15	NM_172979|Muc15|269328|mucin 15	BC094506|Muc15|269328|mucin 15	BC116796|Muc15|269328|mucin 15	BC119176|Muc15|269328|mucin 15
mm9_v1_chr10_-_22451738_22451780	0.824805	FOX{I1,J2}.p2	AK005604|Tbpl1|237336|TATA box binding protein-like 1
mm9_v1_chr11_+_118295166_118295166	0.821985	FOX{I1,J2}.p2	AF192499|C1qtnf1|56745|C1q and tumor necrosis factor related protein 1	NM_019959|C1qtnf1|56745|C1q and tumor necrosis factor related protein 1
mm9_v1_chr4_+_135842056_135842075	0.821625	FOX{I1,J2}.p2	AK136405|Zfp46|22704|zinc finger protein 46
mm9_v1_chr19_+_53218486_53218486	0.821222	FOX{I1,J2}.p2	BC037116|Add3|27360|adducin 3 (gamma)	NM_013758|Add3|27360|adducin 3 (gamma)
mm9_v1_chr2_+_24132788_24133018	0.820098	FOX{I1,J2}.p2	AK008977|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK009741|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK076547|Il1f5|54450|interleukin 1 family, member 5 (delta)	NM_019451|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK010020|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF200495|Il1f5|54450|interleukin 1 family, member 5 (delta)	AJ250429|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132600|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132602|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF230378|Il1f5|54450|interleukin 1 family, member 5 (delta)
mm9_v1_chr17_-_28536455_28536544	0.818376	FOX{I1,J2}.p2	AK199818|Fkbp5|14229|FK506 binding protein 5
mm9_v1_chr10_+_126415973_126416035	0.811871	FOX{I1,J2}.p2	AK049271|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	AK170287|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	AK045068|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm9_v1_chr9_+_108242511_108242517	0.810224	FOX{I1,J2}.p2	
mm9_v1_chr12_+_107248419_107248492	0.809957	FOX{I1,J2}.p2	BC016676|Vrk1|22367|vaccinia related kinase 1	NM_001029843|Vrk1|22367|vaccinia related kinase 1	NM_001029844|Vrk1|22367|vaccinia related kinase 1	NM_011705|Vrk1|22367|vaccinia related kinase 1	BC051072|Vrk1|22367|vaccinia related kinase 1
mm9_v1_chr2_-_44965866_44965983	0.809816	FOX{I1,J2}.p2	AK122312|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535781|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535783|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr2_-_94104877_94104914	0.809376	FOX{I1,J2}.p2	AK140370|E530001K10Rik|414123|RIKEN cDNA E530001K10 gene	AK089118|E530001K10Rik|414123|RIKEN cDNA E530001K10 gene
mm9_v1_chr17_+_56098594_56098609	0.808531	FOX{I1,J2}.p2	AK078481|Ccdc94|72886|coiled-coil domain containing 94	AK013533|Ccdc94|72886|coiled-coil domain containing 94	BC031400|Ccdc94|72886|coiled-coil domain containing 94	NM_028381|Ccdc94|72886|coiled-coil domain containing 94
mm9_v1_chr10_+_18127443_18127504	0.807903	FOX{I1,J2}.p2	AK041760|Nhsl1|215819|NHS-like 1	AK017530|Nhsl1|215819|NHS-like 1	NM_173390|Nhsl1|215819|NHS-like 1	AK038892|Nhsl1|215819|NHS-like 1
mm9_v1_chr8_-_44613490_44613490	0.805833	FOX{I1,J2}.p2	AK015931|Adam26b|382007|a disintegrin and metallopeptidase domain 26B	NM_001009547|Adam26b|382007|a disintegrin and metallopeptidase domain 26B
mm9_v1_chr18_-_60751369_60751441	0.805488	FOX{I1,J2}.p2	BC104046|Myoz3|170947|myozenin 3	BC104047|Myoz3|170947|myozenin 3	NM_133363|Myoz3|170947|myozenin 3	AF480442|Myoz3|170947|myozenin 3
mm9_v1_chr18_-_46372017_46372260	0.804557	FOX{I1,J2}.p2	AY251389|Trim36|28105|tripartite motif-containing 36	AB103063|Trim36|28105|tripartite motif-containing 36	BC058106|Trim36|28105|tripartite motif-containing 36	NM_178872|Trim36|28105|tripartite motif-containing 36
mm9_v1_chr5_+_65739560_65739654	0.803374	FOX{I1,J2}.p2	BC138008|Klb|83379|klotho beta	BC138010|Klb|83379|klotho beta	AK133823|Klb|83379|klotho beta	AF165171|Klb|83379|klotho beta	AF165170|Klb|83379|klotho beta	NM_031180|Klb|83379|klotho beta	AF178429|Klb|83379|klotho beta
mm9_v1_chrX_+_160528118_160528196	0.802276	FOX{I1,J2}.p2	AF178085|Tmem27|57394|transmembrane protein 27	NM_020626|Tmem27|57394|transmembrane protein 27	AK148534|Tmem27|57394|transmembrane protein 27	AK002337|Tmem27|57394|transmembrane protein 27	BC049912|Tmem27|57394|transmembrane protein 27
mm9_v1_chr9_-_13631343_13631398	0.802223	FOX{I1,J2}.p2	AY225093|Cep57|74360|centrosomal protein 57	AK028458|Cep57|74360|centrosomal protein 57	AK028408|Cep57|74360|centrosomal protein 57
mm9_v1_chr6_+_89696475_89696475	0.799356	FOX{I1,J2}.p2	NM_053230|Vmn1r41|113857|vomeronasal 1 receptor 41
mm9_v1_chr19_-_34240392_34240542	0.796173	FOX{I1,J2}.p2	BC003460|Ankrd22|52024|ankyrin repeat domain 22	AK017408|Ankrd22|52024|ankyrin repeat domain 22	AK037242|Ankrd22|52024|ankyrin repeat domain 22	AK017360|Ankrd22|52024|ankyrin repeat domain 22	NM_024204|Ankrd22|52024|ankyrin repeat domain 22	AK012869|Ankrd22|52024|ankyrin repeat domain 22
mm9_v1_chr11_-_77990112_77990142	0.79607	FOX{I1,J2}.p2	BC057995|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8	AK079149|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8	BC070457|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8	AF407579|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8	AK154358|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8	AK014546|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8
mm9_v1_chr5_-_86802390_86802444	0.795653	FOX{I1,J2}.p2	AF448809|Tmprss11d|231382|transmembrane protease, serine 11d	BC020151|Tmprss11d|231382|transmembrane protease, serine 11d	NM_145561|Tmprss11d|231382|transmembrane protease, serine 11d	AB053953|Tmprss11d|231382|transmembrane protease, serine 11d
mm9_v1_chr9_-_58097569_58097598	0.795194	FOX{I1,J2}.p2	AK052305|Pml|18854|promyelocytic leukemia	AK054135|Pml|18854|promyelocytic leukemia	AK028044|Pml|18854|promyelocytic leukemia	NM_008884|Pml|18854|promyelocytic leukemia	NM_178087|Pml|18854|promyelocytic leukemia
mm9_v1_chr5_+_107926763_107926815	0.79461	FOX{I1,J2}.p2	AK043587|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	NM_001007574|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK043720|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK164388|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	AK169666|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene	NM_001168557|A830010M20Rik|231570|RIKEN cDNA A830010M20 gene
mm9_v1_chr11_+_53583927_53584130	0.794146	FOX{I1,J2}.p2	NM_001159396|Irf1|16362|interferon regulatory factor 1	BC003821|Irf1|16362|interferon regulatory factor 1
mm9_v1_chr4_+_137009210_137009211	0.793676	FOX{I1,J2}.p2	NM_027063|1700013G24Rik|69380|RIKEN cDNA 1700013G24 gene	AK005952|1700013G24Rik|69380|RIKEN cDNA 1700013G24 gene
mm9_v1_chr6_-_136806041_136806120	0.791378	FOX{I1,J2}.p2	BC046306|Art4|109978|ADP-ribosyltransferase 4	AK004744|Art4|109978|ADP-ribosyltransferase 4	AK019467|Art4|109978|ADP-ribosyltransferase 4	NM_026639|Art4|109978|ADP-ribosyltransferase 4
mm9_v1_chr13_+_68736315_68736329	0.791152	FOX{I1,J2}.p2	AK005609|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	AK138387|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	NM_027035|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	BC049693|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	BC119515|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	BC119516|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene
mm9_v1_chr11_+_101489262_101489282	0.790765	FOX{I1,J2}.p2	AK010457|Rdm1|66599|RAD52 motif 1	NM_025654|Rdm1|66599|RAD52 motif 1	BC055013|Rdm1|66599|RAD52 motif 1	AK003135|Rdm1|66599|RAD52 motif 1	BC026811|Rdm1|66599|RAD52 motif 1
mm9_v1_chr13_-_33935276_33935276	0.790518	FOX{I1,J2}.p2	NM_001045535|Serpinb6e|435350|serine (or cysteine) peptidase inhibitor, clade B, member 6e
mm9_v1_chr1_-_99024782_99024879	0.790141	FOX{I1,J2}.p2	BC139066|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	BC139067|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK132668|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK161249|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK016647|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK029505|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	NM_028942|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1
mm9_v1_chr7_-_105509797_105509909	0.789221	FOX{I1,J2}.p2	AK035461|Tsku|244152|tsukushin	AK053973|Tsku|244152|tsukushin	AK137208|Tsku|244152|tsukushin	NM_001024619|Tsku|244152|tsukushin	NM_001168540|Tsku|244152|tsukushin	NM_001168541|Tsku|244152|tsukushin	NM_001168539|Tsku|244152|tsukushin
mm9_v1_chr6_-_130183339_130183339	0.787861	FOX{I1,J2}.p2	NM_001110323|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10093|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10095|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7
mm9_v1_chr14_-_25306175_25306259	0.787739	FOX{I1,J2}.p2	BC151168|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	BC151002|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	BC151169|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	AK143315|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	BC053071|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A
mm9_v1_chr2_-_150514717_150514872	0.786479	FOX{I1,J2}.p2	AF391758|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AY056825|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AK044393|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AK044687|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	BC138456|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	BC138460|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	AF395732|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	BC057647|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)	NM_054068|Vsx1|114889|visual system homeobox 1 homolog (zebrafish)
mm9_v1_chr10_+_77324719_77324719	0.78631	FOX{I1,J2}.p2	NM_001101631|Gm3285|100041351|predicted gene 3285
mm9_v1_chr9_-_57966613_57966629	0.78485	FOX{I1,J2}.p2	AK166434|Ccdc33|382077|coiled-coil domain containing 33	AK145264|Ccdc33|382077|coiled-coil domain containing 33	NM_001166282|Ccdc33|382077|coiled-coil domain containing 33
mm9_v1_chr1_-_162964371_162964389	0.784657	FOX{I1,J2}.p2	BC113763|Zbtb37|240869|zinc finger and BTB domain containing 37	AK084871|Zbtb37|240869|zinc finger and BTB domain containing 37	NM_173424|Zbtb37|240869|zinc finger and BTB domain containing 37
mm9_v1_chr7_+_51097638_51097638	0.783013	FOX{I1,J2}.p2	AK003996|Klk5|68668|kallikrein related-peptidase 5	BC139475|Klk5|68668|kallikrein related-peptidase 5	BC139478|Klk5|68668|kallikrein related-peptidase 5	NM_026806|Klk5|68668|kallikrein related-peptidase 5
mm9_v1_chr6_+_121596815_121596927	0.782457	FOX{I1,J2}.p2	BC023844|A2m|232345|alpha-2-macroglobulin
mm9_v1_chr6_+_88172261_88172283	0.781706	FOX{I1,J2}.p2	AB028856|Dnajb8|56691|DnaJ (Hsp40) homolog, subfamily B, member 8	NM_019964|Dnajb8|56691|DnaJ (Hsp40) homolog, subfamily B, member 8	AK006026|Dnajb8|56691|DnaJ (Hsp40) homolog, subfamily B, member 8	BC061112|Dnajb8|56691|DnaJ (Hsp40) homolog, subfamily B, member 8	BC049591|Dnajb8|56691|DnaJ (Hsp40) homolog, subfamily B, member 8
mm9_v1_chr11_+_113485570_113485570	0.780617	FOX{I1,J2}.p2	NM_001042606|Sstr2|20606|somatostatin receptor 2	NM_009217|Sstr2|20606|somatostatin receptor 2
mm9_v1_chr9_+_57437238_57437346	0.780282	FOX{I1,J2}.p2	NM_027895|Ulk3|71742|unc-51-like kinase 3 (C. elegans)	BC037093|Ulk3|71742|unc-51-like kinase 3 (C. elegans)	AK004783|Ulk3|71742|unc-51-like kinase 3 (C. elegans)	BC151153|Ulk3|71742|unc-51-like kinase 3 (C. elegans)	AK154642|Ulk3|71742|unc-51-like kinase 3 (C. elegans)
mm9_v1_chr4_-_145749008_145749008	0.779529	FOX{I1,J2}.p2	NM_001085522|Gm13251|433791|predicted gene 13251
mm9_v1_chr18_+_37656644_37656807	0.77851	FOX{I1,J2}.p2	AK029163|Pcdhb19|93890|protocadherin beta 19	AK147520|Pcdhb19|93890|protocadherin beta 19	AK160654|Pcdhb19|93890|protocadherin beta 19	NM_053144|Pcdhb19|93890|protocadherin beta 19	AK046363|Pcdhb19|93890|protocadherin beta 19	BC141290|Pcdhb19|93890|protocadherin beta 19	BC141291|Pcdhb19|93890|protocadherin beta 19	AF326312|Pcdhb19|93890|protocadherin beta 19	AY013780|Pcdhb19|93890|protocadherin beta 19
mm9_v1_chr4_-_19447698_19447753	0.776559	FOX{I1,J2}.p2	BC053980|Cpne3|70568|copine III
mm9_v1_chr19_+_36158191_36158279	0.776041	FOX{I1,J2}.p2	NM_019428|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	AK004137|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	BC062146|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	U95123|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	AK160536|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)	AK169253|Rpp30|54364|ribonuclease P/MRP 30 subunit (human)
mm9_v1_chr6_+_122503826_122503835	0.775975	FOX{I1,J2}.p2	NM_009645|Aicda|11628|activation-induced cytidine deaminase	AF132979|Aicda|11628|activation-induced cytidine deaminase
mm9_v1_chr10_-_127188724_127188780	0.775877	FOX{I1,J2}.p2	BC125279|Gpr182|11536|G protein-coupled receptor 182	D17292|Gpr182|11536|G protein-coupled receptor 182
mm9_v1_chr7_-_91763744_91763768	0.775746	FOX{I1,J2}.p2	AK164865|Zfand6|65098|zinc finger, AN1-type domain 6
mm9_v1_chr4_-_6381414_6381433	0.775343	FOX{I1,J2}.p2	AK164305|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	AK172560|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor	NM_010945|Nsmaf|18201|neutral sphingomyelinase (N-SMase) activation associated factor
mm9_v1_chr11_-_120823366_120823479	0.775052	FOX{I1,J2}.p2	AK178709|Csnk1d|104318|casein kinase 1, delta	AK199847|Csnk1d|104318|casein kinase 1, delta	AK210543|Csnk1d|104318|casein kinase 1, delta
mm9_v1_chr10_-_80561616_80561616	0.774851	FOX{I1,J2}.p2	AK077258|Creb3l3|208677|cAMP responsive element binding protein 3-like 3	NM_145365|Creb3l3|208677|cAMP responsive element binding protein 3-like 3
mm9_v1_chr11_+_75161934_75162104	0.774813	FOX{I1,J2}.p2	NM_001102611|Smyd4|319822|SET and MYND domain containing 4	AK166057|Smyd4|319822|SET and MYND domain containing 4	AK089959|Smyd4|319822|SET and MYND domain containing 4	AK141484|Smyd4|319822|SET and MYND domain containing 4	BC095952|Smyd4|319822|SET and MYND domain containing 4	BC049810|Smyd4|319822|SET and MYND domain containing 4	AK030380|Smyd4|319822|SET and MYND domain containing 4	AK154507|Smyd4|319822|SET and MYND domain containing 4
mm9_v1_chr2_-_66473008_66473018	0.774256	FOX{I1,J2}.p2	NM_018852|Scn9a|20274|sodium channel, voltage-gated, type IX, alpha	AK141871|Scn9a|20274|sodium channel, voltage-gated, type IX, alpha
mm9_v1_chr6_+_30026320_30026320	0.773359	FOX{I1,J2}.p2	AK135673|Nrf1|18181|nuclear respiratory factor 1	NM_001164229|Nrf1|18181|nuclear respiratory factor 1
mm9_v1_chr3_-_95111053_95111097	0.772352	FOX{I1,J2}.p2	AJ401160|Anxa9|71790|annexin A9	AK010128|Anxa9|71790|annexin A9	NM_023628|Anxa9|71790|annexin A9
mm9_v1_chr6_+_142723841_142723893	0.771793	FOX{I1,J2}.p2	AK213220|Cmas|12764|cytidine monophospho-N-acetylneuraminic acid synthetase
mm9_v1_chr18_-_42356324_42356362	0.770315	FOX{I1,J2}.p2	BC110558|Plac8l1|69401|PLAC8-like 1	BC110559|Plac8l1|69401|PLAC8-like 1	AK006002|Plac8l1|69401|PLAC8-like 1	AK005800|Plac8l1|69401|PLAC8-like 1	NM_027072|Plac8l1|69401|PLAC8-like 1
mm9_v1_chr17_+_36016728_36016783	0.769991	FOX{I1,J2}.p2	BC009147|Dhx16|69192|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC046781|Dhx16|69192|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC138204|Dhx16|69192|DEAH (Asp-Glu-Ala-His) box polypeptide 16	BC138205|Dhx16|69192|DEAH (Asp-Glu-Ala-His) box polypeptide 16
mm9_v1_chr4_-_118905241_118905332	0.76963	FOX{I1,J2}.p2	AK158349|AU022252|230696|expressed sequence AU022252	AK167445|AU022252|230696|expressed sequence AU022252	BC035522|AU022252|230696|expressed sequence AU022252	AK082225|4930538K18Rik|75180|RIKEN cDNA 4930538K18 gene	BC089614|AU022252|230696|expressed sequence AU022252	NM_001012400|AU022252|230696|expressed sequence AU022252
mm9_v1_chr15_-_66761030_66761081	0.767774	FOX{I1,J2}.p2	
mm9_v1_chr4_-_132288428_132288460	0.76462	FOX{I1,J2}.p2	AK029920|Xkr8|381560|X Kell blood group precursor related family member 8 homolog	AY534254|Xkr8|381560|X Kell blood group precursor related family member 8 homolog	NM_201368|Xkr8|381560|X Kell blood group precursor related family member 8 homolog
mm9_v1_chr17_+_19641774_19641774	0.764326	FOX{I1,J2}.p2	NM_001104562|Vmn2r100|627537|vomeronasal 2, receptor 100
mm9_v1_chr16_+_32247284_32247386	0.763886	FOX{I1,J2}.p2	NM_001185162|Wdr53|68980|WD repeat domain 53	NM_026898|Wdr53|68980|WD repeat domain 53	AK170771|Wdr53|68980|WD repeat domain 53	AK005105|Wdr53|68980|WD repeat domain 53
mm9_v1_chr12_-_33777667_33777744	0.762248	FOX{I1,J2}.p2	BC138911|Cdhr3|68764|cadherin-related family member 3	AK047666|Cdhr3|68764|cadherin-related family member 3	AK049806|Cdhr3|68764|cadherin-related family member 3	NM_001024478|Cdhr3|68764|cadherin-related family member 3
mm9_v1_chr10_+_128143313_128143342	0.761099	FOX{I1,J2}.p2	AK012808|Pmel|20431|premelanosome protein	AK131956|Pmel|20431|premelanosome protein	NM_021882|Pmel|20431|premelanosome protein	BC075667|Pmel|20431|premelanosome protein	BC082555|Pmel|20431|premelanosome protein	U14133|Pmel|20431|premelanosome protein
mm9_v1_chr6_+_47827641_47827690	0.760855	FOX{I1,J2}.p2	AK030516|Zfp282|101095|zinc finger protein 282	AK081854|Zfp282|101095|zinc finger protein 282	BC025581|Zfp282|101095|zinc finger protein 282
mm9_v1_chr12_+_33832550_33832590	0.759937	FOX{I1,J2}.p2	NM_028139|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr12_+_31758725_31758862	0.759709	FOX{I1,J2}.p2	AK139763|Fam110c|104943|family with sequence similarity 110, member C	AK160079|Fam110c|104943|family with sequence similarity 110, member C	BC019466|Fam110c|104943|family with sequence similarity 110, member C	NM_027828|Fam110c|104943|family with sequence similarity 110, member C	BC085288|Fam110c|104943|family with sequence similarity 110, member C	AK018545|Fam110c|104943|family with sequence similarity 110, member C
mm9_v1_chr6_-_53928655_53928666	0.758604	FOX{I1,J2}.p2	BC137839|Cpvl|71287|carboxypeptidase, vitellogenic-like	BC144966|Cpvl|71287|carboxypeptidase, vitellogenic-like	NM_027749|Cpvl|71287|carboxypeptidase, vitellogenic-like	AK017087|Cpvl|71287|carboxypeptidase, vitellogenic-like
mm9_v1_chr7_+_52198609_52198630	0.758502	FOX{I1,J2}.p2	NM_001077591|Tsks|22116|testis-specific serine kinase substrate	NM_011651|Tsks|22116|testis-specific serine kinase substrate	AF025310|Tsks|22116|testis-specific serine kinase substrate	BC118618|Tsks|22116|testis-specific serine kinase substrate	BC121827|Tsks|22116|testis-specific serine kinase substrate
mm9_v1_chr18_+_52805869_52805873	0.757382	FOX{I1,J2}.p2	AK018840|1700034E13Rik|78414|RIKEN cDNA 1700034E13 gene	BC048563|1700034E13Rik|78414|RIKEN cDNA 1700034E13 gene	NM_030097|1700034E13Rik|78414|RIKEN cDNA 1700034E13 gene
mm9_v1_chr1_-_88008483_88008544	0.756402	FOX{I1,J2}.p2	BC023690|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B	AK033713|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B	NM_008311|Htr2b|15559|5-hydroxytryptamine (serotonin) receptor 2B
mm9_v1_chr1_+_83156336_83156343	0.756186	FOX{I1,J2}.p2	AK016977|Wdr69|71227|WD repeat domain 69	BC049704|Wdr69|71227|WD repeat domain 69	BC144994|Wdr69|71227|WD repeat domain 69	BC145995|Wdr69|71227|WD repeat domain 69	NM_027725|Wdr69|71227|WD repeat domain 69	AK016201|Wdr69|71227|WD repeat domain 69
mm9_v1_chr2_+_29934214_29934285	0.754381	FOX{I1,J2}.p2	AK142988|Pkn3|263803|protein kinase N3	AK142182|Pkn3|263803|protein kinase N3	BC034126|Pkn3|263803|protein kinase N3	NM_153805|Pkn3|263803|protein kinase N3
mm9_v1_chr1_-_37486768_37486947	0.753225	FOX{I1,J2}.p2	AK177444|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK218336|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK018255|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK040907|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK050432|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	BC002137|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK166651|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK169639|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	NM_198006|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene
mm9_v1_chr10_+_111602731_111602731	0.753134	FOX{I1,J2}.p2	BC116659|Caps2|353025|calcyphosphine 2	NM_178278|Caps2|353025|calcyphosphine 2
mm9_v1_chr14_-_56262407_56262432	0.752937	FOX{I1,J2}.p2	AK152476|Tm9sf1|74140|transmembrane 9 superfamily member 1	AK152540|Tm9sf1|74140|transmembrane 9 superfamily member 1
mm9_v1_chr14_+_56660959_56660977	0.752716	FOX{I1,J2}.p2	AK133521|Mcpt2|17225|mast cell protease 2	AY007570|Mcpt2|17225|mast cell protease 2	NM_008571|Mcpt2|17225|mast cell protease 2	BC119248|Mcpt2|17225|mast cell protease 2	BC119250|Mcpt2|17225|mast cell protease 2	J05177|Mcpt2|17225|mast cell protease 2
mm9_v1_chr9_+_27204405_27204405	0.748873	FOX{I1,J2}.p2	AB120716|Spata19|75469|spermatogenesis associated 19	AK005610|Spata19|75469|spermatogenesis associated 19	NM_029299|Spata19|75469|spermatogenesis associated 19
mm9_v1_chr5_+_32761610_32761706	0.747723	FOX{I1,J2}.p2	AK004686|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	M27073|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK160743|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	BC046832|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK168512|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK088893|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr17_-_27304602_27304708	0.747652	FOX{I1,J2}.p2	BC141263|Ip6k3|271424|inositol hexaphosphate kinase 3	AK052857|Ip6k3|271424|inositol hexaphosphate kinase 3	NM_173027|Ip6k3|271424|inositol hexaphosphate kinase 3
mm9_v1_chr7_-_30875415_30875528	0.747278	FOX{I1,J2}.p2	BC019790|Zfp566|72556|zinc finger protein 566	AK012367|Zfp566|72556|zinc finger protein 566	NM_152814|Zfp566|72556|zinc finger protein 566
mm9_v1_chr18_-_46440360_46440503	0.742879	FOX{I1,J2}.p2	AK028188|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit	AK170240|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit	BC141021|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit	AK081731|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit	NM_172627|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit
mm9_v1_chr6_-_30865541_30865572	0.7413	FOX{I1,J2}.p2	AF294348|Tsga13|116732|testis specific gene A13	AK006265|Tsga13|116732|testis specific gene A13	NM_054073|Tsga13|116732|testis specific gene A13
mm9_v1_chr5_+_138628733_138628797	0.741252	FOX{I1,J2}.p2	AK011474|Cnpy4|66455|canopy 4 homolog (zebrafish)	AK033219|Cnpy4|66455|canopy 4 homolog (zebrafish)	AK051562|Cnpy4|66455|canopy 4 homolog (zebrafish)	NM_178612|Cnpy4|66455|canopy 4 homolog (zebrafish)	AK012968|Cnpy4|66455|canopy 4 homolog (zebrafish)	BC086647|Cnpy4|66455|canopy 4 homolog (zebrafish)
mm9_v1_chr11_-_77990151_77990167	0.740638	FOX{I1,J2}.p2	NM_080849|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8
mm9_v1_chr4_-_12015073_12015153	0.739396	FOX{I1,J2}.p2	AK017238|Tmem67|329795|transmembrane protein 67	AK039177|Tmem67|329795|transmembrane protein 67	AK042835|Tmem67|329795|transmembrane protein 67	AK133059|Tmem67|329795|transmembrane protein 67	AK045429|Tmem67|329795|transmembrane protein 67	NM_177861|Tmem67|329795|transmembrane protein 67	AK077246|Tmem67|329795|transmembrane protein 67
mm9_v1_chr15_+_5135711_5135737	0.73923	FOX{I1,J2}.p2	AK013464|Ttc33|67515|tetratricopeptide repeat domain 33	BC017533|Ttc33|67515|tetratricopeptide repeat domain 33	AK075643|Ttc33|67515|tetratricopeptide repeat domain 33
mm9_v1_chr3_+_145600974_145601015	0.738907	FOX{I1,J2}.p2	BC049577|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	AK010378|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	BC115465|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	NM_025555|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	AK019404|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	AK077565|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene
mm9_v1_chr2_-_32630849_32630902	0.7389	FOX{I1,J2}.p2	BC140991|Ttc16|338348|tetratricopeptide repeat domain 16	BC145064|Ttc16|338348|tetratricopeptide repeat domain 16	AK028040|Ttc16|338348|tetratricopeptide repeat domain 16	AK160435|Ttc16|338348|tetratricopeptide repeat domain 16	NM_177384|Ttc16|338348|tetratricopeptide repeat domain 16
mm9_v1_chr2_+_26775279_26775409	0.738885	FOX{I1,J2}.p2	AK215042|Surf2|20931|surfeit gene 2
mm9_v1_chr4_+_143002328_143002328	0.738364	FOX{I1,J2}.p2	AK029142|Pramef8|242736|PRAME family member 8	NM_172877|Pramef8|242736|PRAME family member 8
mm9_v1_chr15_+_81900546_81900546	0.738173	FOX{I1,J2}.p2	NM_028897|Mei1|74369|meiosis defective 1
mm9_v1_chr4_+_143125856_143125856	0.736595	FOX{I1,J2}.p2	NM_001113735|Gm13057|100040861|predicted gene 13057	NM_001113736|Gm13040|100040854|predicted gene 13040
mm9_v1_chr4_+_143141602_143141602	0.736595	FOX{I1,J2}.p2	NM_001113735|Gm13057|100040861|predicted gene 13057	NM_001113736|Gm13040|100040854|predicted gene 13040
mm9_v1_chr13_+_32893989_32894122	0.736547	FOX{I1,J2}.p2	AB056151|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr1_+_136859183_136859192	0.734635	FOX{I1,J2}.p2	AK012565|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)	BC029213|Ube2t|67196|ubiquitin-conjugating enzyme E2T (putative)
mm9_v1_chr13_-_27759883_27759904	0.733962	FOX{I1,J2}.p2	BC099468|Prl7a2|19114|prolactin family 7, subfamily a, member 2	AF011382|Prl7a2|19114|prolactin family 7, subfamily a, member 2	AF020524|Prl7a2|19114|prolactin family 7, subfamily a, member 2	AK005455|Prl7a2|19114|prolactin family 7, subfamily a, member 2	AK028068|Prl7a2|19114|prolactin family 7, subfamily a, member 2	AK131665|Prl7a2|19114|prolactin family 7, subfamily a, member 2	NM_011168|Prl7a2|19114|prolactin family 7, subfamily a, member 2
mm9_v1_chr13_+_23787679_23787706	0.733588	FOX{I1,J2}.p2	NM_010377|Hist1h1t|107970|histone cluster 1, H1t	BC119305|Hist1h1t|107970|histone cluster 1, H1t	BC119307|Hist1h1t|107970|histone cluster 1, H1t
mm9_v1_chr3_+_32607424_32607471	0.732884	FOX{I1,J2}.p2	NM_019673|Actl6a|56456|actin-like 6A	AK013221|Actl6a|56456|actin-like 6A
mm9_v1_chr15_+_102840224_102840225	0.732634	FOX{I1,J2}.p2	AK050798|Hoxc6|15425|homeobox C6
mm9_v1_chr7_-_55237665_55237665	0.732351	FOX{I1,J2}.p2	AY042194|Mrgpra4|235854|MAS-related GPR, member A4	NM_153524|Mrgpra4|235854|MAS-related GPR, member A4
mm9_v1_chr9_+_13632152_13632249	0.729827	FOX{I1,J2}.p2	AK145026|Fam76b|72826|family with sequence similarity 76, member B	BC043120|Fam76b|72826|family with sequence similarity 76, member B	NM_176836|Fam76b|72826|family with sequence similarity 76, member B	AK052430|Fam76b|72826|family with sequence similarity 76, member B	BC050870|Fam76b|72826|family with sequence similarity 76, member B
mm9_v1_chr5_+_77445047_77445068	0.728022	FOX{I1,J2}.p2	BC053422|1700023E05Rik|71868|RIKEN cDNA 1700023E05 gene	NM_027970|1700023E05Rik|71868|RIKEN cDNA 1700023E05 gene	AK006270|1700023E05Rik|71868|RIKEN cDNA 1700023E05 gene
mm9_v1_chr15_+_77529318_77529334	0.727688	FOX{I1,J2}.p2	BC085284|Apol7b|278679|apolipoprotein L 7b	NM_001024848|Apol7b|278679|apolipoprotein L 7b	NM_001134802|Apol7e|666348|apolipoprotein L 7e	AK134162|Apol7e|666348|apolipoprotein L 7e
mm9_v1_chr5_+_121039024_121039042	0.726855	FOX{I1,J2}.p2	AK076996|Iqcd|75732|IQ motif containing D	NM_029408|Iqcd|75732|IQ motif containing D	AK017032|Iqcd|75732|IQ motif containing D	BC125429|Iqcd|75732|IQ motif containing D	BC137644|Iqcd|75732|IQ motif containing D	BC100441|Iqcd|75732|IQ motif containing D
mm9_v1_chr4_+_135315629_135315629	0.726096	FOX{I1,J2}.p2	NM_001085509|Myom3|242702|myomesin family, member 3
mm9_v1_chr18_-_47528483_47528523	0.725137	FOX{I1,J2}.p2	BC059238|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK042751|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	NM_018744|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK082711|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm9_v1_chr2_-_69550662_69550662	0.724129	FOX{I1,J2}.p2	BC075689|Fastkd1|320720|FAST kinase domains 1	NM_177244|Fastkd1|320720|FAST kinase domains 1
mm9_v1_chr16_-_88878143_88878282	0.724099	FOX{I1,J2}.p2	AF345296|Krtap16-6|170655|keratin associated protein 16-6	AF345295|Krtap16-5|77918|keratin associated protein 16-5	BC115545|Krtap16-5|77918|keratin associated protein 16-5	BC115546|Krtap16-5|77918|keratin associated protein 16-5	AK020697|Krtap16-5|77918|keratin associated protein 16-5	NM_130857|Krtap16-5|77918|keratin associated protein 16-5
mm9_v1_chr19_-_7785715_7785799	0.723427	FOX{I1,J2}.p2	AF529221|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	BC021384|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	AK052752|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	AK052603|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19	NM_144785|Slc22a19|207151|solute carrier family 22 (organic anion transporter), member 19
mm9_v1_chr15_+_4677207_4677220	0.721479	FOX{I1,J2}.p2	NM_016704|C6|12274|complement component 6	AF184900|C6|12274|complement component 6	AK041057|C6|12274|complement component 6	BC011251|C6|12274|complement component 6
mm9_v1_chr15_+_4848736_4848736	0.720724	FOX{I1,J2}.p2	AK015457|Heatr7b2|223825|XVHEAT repeat family member 7B2	NM_001166066|Heatr7b2|223825|XVHEAT repeat family member 7B2
mm9_v1_chr7_+_107422781_107422864	0.719363	FOX{I1,J2}.p2	AK043357|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr13_+_28234352_28234406	0.718438	FOX{I1,J2}.p2	AK005447|Prl5a1|28078|prolactin family 5, subfamily a, member 1	NM_023746|Prl5a1|28078|prolactin family 5, subfamily a, member 1	BC051672|Prl5a1|28078|prolactin family 5, subfamily a, member 1	AF226611|Prl5a1|28078|prolactin family 5, subfamily a, member 1
mm9_v1_chr4_+_119487105_119487332	0.718204	FOX{I1,J2}.p2	AY454348|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	BC058336|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	NM_010657|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	AY454345|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3
mm9_v1_chr9_+_121643763_121643808	0.716554	FOX{I1,J2}.p2	AK052484|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr13_-_49748135_49748153	0.716515	FOX{I1,J2}.p2	AK076577|Cenpp|66336|centromere protein P	BC094280|Cenpp|66336|centromere protein P
mm9_v1_chr2_-_165225861_165225904	0.715276	FOX{I1,J2}.p2	BC020160|4833422F24Rik|74614|RIKEN cDNA 4833422F24 gene	AK014751|4833422F24Rik|74614|RIKEN cDNA 4833422F24 gene	NM_029021|4833422F24Rik|74614|RIKEN cDNA 4833422F24 gene	AK042271|4833422F24Rik|74614|RIKEN cDNA 4833422F24 gene
mm9_v1_chr11_-_94902584_94902717	0.714737	FOX{I1,J2}.p2	AF267660|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	AK002647|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	BC021764|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2	NM_133667|Pdk2|18604|pyruvate dehydrogenase kinase, isoenzyme 2
mm9_v1_chr16_+_88829238_88829254	0.714507	FOX{I1,J2}.p2	AK132534|Krtap15|26560|keratin associated protein 15	NM_013713|Krtap15|26560|keratin associated protein 15	BC116219|Krtap15|26560|keratin associated protein 15
mm9_v1_chr6_-_30341017_30341032	0.71329	FOX{I1,J2}.p2	AK168071|Zc3hc1|232679|zinc finger, C3HC type 1	AK146228|Zc3hc1|232679|zinc finger, C3HC type 1	AK167992|Zc3hc1|232679|zinc finger, C3HC type 1
mm9_v1_chr17_-_37706393_37706395	0.712439	FOX{I1,J2}.p2	AK029968|Olfr112|258096|olfactory receptor 112	NM_001013575|Olfr112|258096|olfactory receptor 112	AK016338|Olfr112|258096|olfactory receptor 112
mm9_v1_chr13_-_54570167_54570211	0.711743	FOX{I1,J2}.p2	BC019603|Thoc3|73666|THO complex 3	AK010668|Thoc3|73666|THO complex 3	NM_028597|Thoc3|73666|THO complex 3
mm9_v1_chr2_+_154262286_154262318	0.710849	FOX{I1,J2}.p2	BC138410|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	BC145266|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	BC145679|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK153602|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm9_v1_chr18_-_6202199_6202203	0.710145	FOX{I1,J2}.p2	AK038217|Kif5b|16573|kinesin family member 5B
mm9_v1_chr7_+_19967358_19967392	0.709967	FOX{I1,J2}.p2	AK141692|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	AK082323|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	AK145969|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	AK082761|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	NM_007949|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	BC034517|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2
mm9_v1_chr17_-_56256950_56256977	0.70825	FOX{I1,J2}.p2	BC024138|Plin5|66968|perilipin 5	DQ473305|Plin5|66968|perilipin 5	AK075872|Plin5|66968|perilipin 5	AK010202|Plin5|66968|perilipin 5	NM_025874|Plin5|66968|perilipin 5
mm9_v1_chr4_+_130219299_130219334	0.70644	FOX{I1,J2}.p2	BC050747|Pum1|80912|pumilio 1 (Drosophila)	AK147185|Pum1|80912|pumilio 1 (Drosophila)	AF321909|Pum1|80912|pumilio 1 (Drosophila)	BC048174|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr6_+_115494665_115494729	0.703002	FOX{I1,J2}.p2	BC061473|Tsen2|381802|tRNA splicing endonuclease 2 homolog (S. cerevisiae)	NM_199033|Tsen2|381802|tRNA splicing endonuclease 2 homolog (S. cerevisiae)	AK044190|Tsen2|381802|tRNA splicing endonuclease 2 homolog (S. cerevisiae)	AK134697|Tsen2|381802|tRNA splicing endonuclease 2 homolog (S. cerevisiae)
mm9_v1_chr12_-_85534964_85534979	0.702849	FOX{I1,J2}.p2	AK155547|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene	AK171272|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene	NM_001163502|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene	AK081554|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene
mm9_v1_chr9_-_65239349_65239458	0.701727	FOX{I1,J2}.p2	AK048611|Kbtbd13|74492|kelch repeat and BTB (POZ) domain containing 13	BC139793|Kbtbd13|74492|kelch repeat and BTB (POZ) domain containing 13	NM_028974|Kbtbd13|74492|kelch repeat and BTB (POZ) domain containing 13
mm9_v1_chr2_-_101489613_101489698	0.701395	FOX{I1,J2}.p2	BC138342|Rag1|19373|recombination activating gene 1	M29475|Rag1|19373|recombination activating gene 1	AK088725|Rag1|19373|recombination activating gene 1	AK162974|Rag1|19373|recombination activating gene 1	DQ112091|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	DQ112092|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	NM_009019|Rag1|19373|recombination activating gene 1
mm9_v1_chr7_-_19242050_19242073	0.701383	FOX{I1,J2}.p2	BC100324|Psg21|72242|pregnancy-specific glycoprotein 21	BC100325|Psg21|72242|pregnancy-specific glycoprotein 21	AK005540|Psg21|72242|pregnancy-specific glycoprotein 21	AK005492|Psg21|72242|pregnancy-specific glycoprotein 21	AK005545|Psg21|72242|pregnancy-specific glycoprotein 21	AK131670|Psg21|72242|pregnancy-specific glycoprotein 21	NM_027403|Psg21|72242|pregnancy-specific glycoprotein 21
mm9_v1_chr8_+_80737195_80737240	0.701235	FOX{I1,J2}.p2	AK006580|Ttc29|73301|tetratricopeptide repeat domain 29	BC048386|Ttc29|73301|tetratricopeptide repeat domain 29	NM_183096|Ttc29|73301|tetratricopeptide repeat domain 29
mm9_v1_chr4_+_130219280_130219280	0.700943	FOX{I1,J2}.p2	AK052145|Pum1|80912|pumilio 1 (Drosophila)	AK161135|Pum1|80912|pumilio 1 (Drosophila)
mm9_v1_chr11_+_99734702_99734753	0.699411	FOX{I1,J2}.p2	NM_015741|Krtap9-1|16705|keratin associated protein 9-1	BC116210|Krtap9-1|16705|keratin associated protein 9-1
mm9_v1_chr6_+_134870680_134870720	0.698721	FOX{I1,J2}.p2	AK046676|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	AK162146|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B	U10440|Cdkn1b|12576|cyclin-dependent kinase inhibitor 1B
mm9_v1_chr17_-_35183667_35183733	0.698268	FOX{I1,J2}.p2	NM_001146215|Msh5|17687|mutS homolog 5 (E. coli)	AF107352|Msh5|17687|mutS homolog 5 (E. coli)	AK042083|Msh5|17687|mutS homolog 5 (E. coli)
mm9_v1_chr7_+_26958427_26958451	0.697172	FOX{I1,J2}.p2	NM_010000|Cyp2b9|13094|cytochrome P450, family 2, subfamily b, polypeptide 9	BC120527|Cyp2b9|13094|cytochrome P450, family 2, subfamily b, polypeptide 9	BC120525|Cyp2b9|13094|cytochrome P450, family 2, subfamily b, polypeptide 9	M21855|Cyp2b9|13094|cytochrome P450, family 2, subfamily b, polypeptide 9
mm9_v1_chr2_-_94252368_94252477	0.697096	FOX{I1,J2}.p2	AK212083|Api5|11800|apoptosis inhibitor 5
mm9_v1_chr4_-_82151180_82151288	0.696715	FOX{I1,J2}.p2	AK034793|Nfib|18028|nuclear factor I/B	Y07686|Nfib|18028|nuclear factor I/B	AK146480|Nfib|18028|nuclear factor I/B	NM_001113209|Nfib|18028|nuclear factor I/B	NM_001113210|Nfib|18028|nuclear factor I/B	NM_008687|Nfib|18028|nuclear factor I/B	AK034261|Nfib|18028|nuclear factor I/B	AK087480|Nfib|18028|nuclear factor I/B	AK084941|Nfib|18028|nuclear factor I/B
mm9_v1_chr4_+_144483110_144483188	0.695337	FOX{I1,J2}.p2	AK087137|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr2_-_122011924_122011924	0.694354	FOX{I1,J2}.p2	AK015195|Patl2|67578|protein associated with topoisomerase II homolog 2 (yeast)	NM_026251|Patl2|67578|protein associated with topoisomerase II homolog 2 (yeast)
mm9_v1_chr6_+_57183432_57183432	0.693558	FOX{I1,J2}.p2	NM_053237|Vmn1r14|113864|vomeronasal 1 receptor 14
mm9_v1_chr13_-_23802696_23802696	0.692487	FOX{I1,J2}.p2	AK150697|Hfe|15216|hemochromatosis
mm9_v1_chr6_+_89664196_89664196	0.691765	FOX{I1,J2}.p2	NM_053228|Vmn1r40|113855|vomeronasal 1 receptor 40
mm9_v1_chr16_-_35871459_35871582	0.691677	FOX{I1,J2}.p2	AK005563|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK089685|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK156483|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	AK156593|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	NM_001039530|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	BC138874|Parp14|547253|poly (ADP-ribose) polymerase family, member 14	BC145452|Parp14|547253|poly (ADP-ribose) polymerase family, member 14
mm9_v1_chr7_-_105347984_105347990	0.689795	FOX{I1,J2}.p2	NM_001081167|B3gnt6|272411|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)	BC039789|B3gnt6|272411|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)
mm9_v1_chr13_-_74946095_74946207	0.688928	FOX{I1,J2}.p2	AB026997|Cast|12380|calpastatin
mm9_v1_chr3_-_157686385_157686385	0.688137	FOX{I1,J2}.p2	NM_026989|Srsf11|69207|serine/arginine-rich splicing factor 11
mm9_v1_chr16_+_37580238_37580255	0.686122	FOX{I1,J2}.p2	NM_013547|Hgd|15233|homogentisate 1, 2-dioxygenase
mm9_v1_chrX_+_66015013_66015108	0.686116	FOX{I1,J2}.p2	BC099411|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_001166619|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_001166620|Fmr1nb|207854|fragile X mental retardation 1 neighbor	NM_174993|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC138087|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC145139|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC145140|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171922|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171923|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171947|Fmr1nb|207854|fragile X mental retardation 1 neighbor	BC171948|Fmr1nb|207854|fragile X mental retardation 1 neighbor	AK076190|Fmr1nb|207854|fragile X mental retardation 1 neighbor	AY214130|Fmr1nb|207854|fragile X mental retardation 1 neighbor
mm9_v1_chr1_-_52714729_52714742	0.685669	FOX{I1,J2}.p2	BC016598|Mfsd6|98682|major facilitator superfamily domain containing 6
mm9_v1_chr5_-_72895711_72895778	0.681993	FOX{I1,J2}.p2	BC093485|Corin|53419|corin	NM_001122756|Corin|53419|corin
mm9_v1_chr10_-_128258639_128258702	0.681493	FOX{I1,J2}.p2	AK002824|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	AK002583|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	AK013455|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	BC002146|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)	NM_024180|Ormdl2|66844|ORM1-like 2 (S. cerevisiae)
mm9_v1_chr7_+_31350445_31350445	0.680203	FOX{I1,J2}.p2	AK154129|Tmem149|101883|transmembrane protein 149	NM_145580|Tmem149|101883|transmembrane protein 149
mm9_v1_chr8_+_18595130_18595172	0.677897	FOX{I1,J2}.p2	AK083572|Mcph1|244329|microcephaly, primary autosomal recessive 1	AK138858|Mcph1|244329|microcephaly, primary autosomal recessive 1	AK042026|Mcph1|244329|microcephaly, primary autosomal recessive 1	BC056924|Mcph1|244329|microcephaly, primary autosomal recessive 1	NM_173189|Mcph1|244329|microcephaly, primary autosomal recessive 1
mm9_v1_chr14_+_32978720_32978774	0.6778	FOX{I1,J2}.p2	AK156999|Ncoa4|27057|nuclear receptor coactivator 4
mm9_v1_chr3_-_9004404_9004540	0.677607	FOX{I1,J2}.p2	U44426|Tpd52|21985|tumor protein D52	BC004068|Tpd52|21985|tumor protein D52	AK171050|Tpd52|21985|tumor protein D52	AK170725|Tpd52|21985|tumor protein D52	AK168379|Tpd52|21985|tumor protein D52	BC094018|Tpd52|21985|tumor protein D52	AK150935|Tpd52|21985|tumor protein D52	AK151471|Tpd52|21985|tumor protein D52	AK151744|Tpd52|21985|tumor protein D52	AK152543|Tpd52|21985|tumor protein D52	AK153266|Tpd52|21985|tumor protein D52	AK161753|Tpd52|21985|tumor protein D52	AK032111|Tpd52|21985|tumor protein D52	AK168817|Tpd52|21985|tumor protein D52	AK153292|Tpd52|21985|tumor protein D52	AK005456|Tpd52|21985|tumor protein D52	BC002036|Tpd52|21985|tumor protein D52	AK169751|Tpd52|21985|tumor protein D52	NM_001025263|Tpd52|21985|tumor protein D52	NM_001025264|Tpd52|21985|tumor protein D52	NM_009412|Tpd52|21985|tumor protein D52
mm9_v1_chr15_-_57723937_57723989	0.677559	FOX{I1,J2}.p2	AK152901|Derl1|67819|Der1-like domain family, member 1	AK148018|Derl1|67819|Der1-like domain family, member 1	AK152197|Derl1|67819|Der1-like domain family, member 1	AK043420|Derl1|67819|Der1-like domain family, member 1	NM_024207|Derl1|67819|Der1-like domain family, member 1	AK007435|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr5_-_92792262_92792321	0.677257	FOX{I1,J2}.p2	AK040051|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	BC025903|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AF136449|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AF178672|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AF179872|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	NM_019494|Cxcl11|56066|chemokine (C-X-C motif) ligand 11	AK020750|Cxcl11|56066|chemokine (C-X-C motif) ligand 11
mm9_v1_chr6_+_123122910_123123040	0.676964	FOX{I1,J2}.p2	AK156711|Clec4b2|381809|C-type lectin domain family 4, member b2	AY365133|Clec4b2|381809|C-type lectin domain family 4, member b2	NM_001004159|Clec4b2|381809|C-type lectin domain family 4, member b2
mm9_v1_chr6_-_118361541_118361556	0.676089	FOX{I1,J2}.p2	BC030906|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)
mm9_v1_chr19_+_8797973_8797989	0.67528	FOX{I1,J2}.p2	AK036616|Snhg1|83673|small nucleolar RNA host gene (non-protein coding) 1	AK043166|Snhg1|83673|small nucleolar RNA host gene (non-protein coding) 1	AK051045|Snhg1|83673|small nucleolar RNA host gene (non-protein coding) 1
mm9_v1_chr7_-_134404120_134404235	0.675117	FOX{I1,J2}.p2	AK010606|Dctpp1|66422|dCTP pyrophosphatase 1	AK003643|Dctpp1|66422|dCTP pyrophosphatase 1	AK010508|Dctpp1|66422|dCTP pyrophosphatase 1	AF110764|Dctpp1|66422|dCTP pyrophosphatase 1	NM_023203|Dctpp1|66422|dCTP pyrophosphatase 1	BC004623|Dctpp1|66422|dCTP pyrophosphatase 1
mm9_v1_chr15_+_75799639_75799648	0.674859	FOX{I1,J2}.p2	BC026404|Zfp707|69020|zinc finger protein 707
mm9_v1_chr5_-_88956788_88956921	0.673882	FOX{I1,J2}.p2	J00544|Igj|16069|immunoglobulin joining chain	AK078865|Igj|16069|immunoglobulin joining chain	M90766|Igj|16069|immunoglobulin joining chain	BC006026|Igj|16069|immunoglobulin joining chain	AK160344|Igj|16069|immunoglobulin joining chain	NM_152839|Igj|16069|immunoglobulin joining chain
mm9_v1_chr8_+_23734514_23734514	0.673237	FOX{I1,J2}.p2	BC018400|Dkk4|234130|dickkopf homolog 4 (Xenopus laevis)	NM_145592|Dkk4|234130|dickkopf homolog 4 (Xenopus laevis)
mm9_v1_chr18_+_50287848_50287993	0.672866	FOX{I1,J2}.p2	AK004866|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK088381|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK147182|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK167060|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK166801|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK169077|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK152532|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	AK161655|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	BC022175|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	NM_008292|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4	X89998|Hsd17b4|15488|hydroxysteroid (17-beta) dehydrogenase 4
mm9_v1_chr5_-_92739036_92739049	0.671897	FOX{I1,J2}.p2	AK029881|Sdad1|231452|SDA1 domain containing 1	NM_172713|Sdad1|231452|SDA1 domain containing 1
mm9_v1_chr15_-_60654198_60654219	0.671181	FOX{I1,J2}.p2	AK162412|Fam84b|399603|family with sequence similarity 84, member B
mm9_v1_chr5_-_86947601_86947624	0.670863	FOX{I1,J2}.p2	BC118660|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	BC118611|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	AK036981|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene	NM_177162|9930032O22Rik|320454|RIKEN cDNA 9930032O22 gene
mm9_v1_chr12_+_12268901_12269011	0.670556	FOX{I1,J2}.p2	NM_001146119|Fam49a|76820|family with sequence similarity 49, member A	NM_029758|Fam49a|76820|family with sequence similarity 49, member A	AK047142|Fam49a|76820|family with sequence similarity 49, member A	BC049664|Fam49a|76820|family with sequence similarity 49, member A
mm9_v1_chr2_+_34262301_34262360	0.6695	FOX{I1,J2}.p2	AK132263|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr5_-_94100392_94100534	0.669297	FOX{I1,J2}.p2	BC085232|C87414|381654|expressed sequence C87414	AK163343|C87414|381654|expressed sequence C87414	NM_001164284|C87414|381654|expressed sequence C87414	NM_001164285|C87414|381654|expressed sequence C87414	AK139835|C87414|381654|expressed sequence C87414
mm9_v1_chr3_-_108692732_108692925	0.669115	FOX{I1,J2}.p2	BC111898|Fndc7|320181|fibronectin type III domain containing 7	BC113188|Fndc7|320181|fibronectin type III domain containing 7	AK053989|Fndc7|320181|fibronectin type III domain containing 7	AK054241|Fndc7|320181|fibronectin type III domain containing 7	NM_001165965|Fndc7|320181|fibronectin type III domain containing 7	NM_177091|Fndc7|320181|fibronectin type III domain containing 7
mm9_v1_chr9_+_38280332_38280333	0.668455	FOX{I1,J2}.p2	BC150476|Olfr905|258800|olfactory receptor 905	NM_146804|Olfr905|258800|olfactory receptor 905
mm9_v1_chr2_-_174092557_174092559	0.667199	FOX{I1,J2}.p2	
mm9_v1_chr10_+_8604373_8604391	0.665836	FOX{I1,J2}.p2	AK010852|Sash1|70097|SAM and SH3 domain containing 1
mm9_v1_chr3_-_98143778_98143903	0.664684	FOX{I1,J2}.p2	BC086668|Phgdh|236539|3-phosphoglycerate dehydrogenase	BC110673|Phgdh|236539|3-phosphoglycerate dehydrogenase	AK147946|Phgdh|236539|3-phosphoglycerate dehydrogenase	AK076815|Phgdh|236539|3-phosphoglycerate dehydrogenase	AK169684|Phgdh|236539|3-phosphoglycerate dehydrogenase	NM_016966|Phgdh|236539|3-phosphoglycerate dehydrogenase
mm9_v1_chr13_-_38750866_38750905	0.66296	FOX{I1,J2}.p2	AK009889|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1	AK003335|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1	AK160723|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1	BC048466|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1	NM_025380|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1
mm9_v1_chr14_+_55840843_55840843	0.661152	FOX{I1,J2}.p2	AK017274|Dhrs2|71412|dehydrogenase/reductase member 2	NM_027790|Dhrs2|71412|dehydrogenase/reductase member 2
mm9_v1_chr6_-_130258378_130258378	0.661146	FOX{I1,J2}.p2	AF074459|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	AF074463|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23	NM_024470|Klra23|79410|killer cell lectin-like receptor subfamily A, member 23
mm9_v1_chr1_-_174825160_174825190	0.660353	FOX{I1,J2}.p2	M23552|Apcs|20219|serum amyloid P-component	X14079|Apcs|20219|serum amyloid P-component	Y00426|Apcs|20219|serum amyloid P-component	NM_011318|Apcs|20219|serum amyloid P-component
mm9_v1_chr4_-_94269846_94269942	0.658395	FOX{I1,J2}.p2	BC139773|Plaa|18786|phospholipase A2, activating protein	AK075934|Plaa|18786|phospholipase A2, activating protein	BC139355|Plaa|18786|phospholipase A2, activating protein	BC139356|Plaa|18786|phospholipase A2, activating protein	NM_172695|Plaa|18786|phospholipase A2, activating protein	AK019070|Plaa|18786|phospholipase A2, activating protein
mm9_v1_chr10_-_25255955_25256077	0.658368	FOX{I1,J2}.p2	AK008073|2010003K15Rik|75606|RIKEN cDNA 2010003K15 gene	NM_001195596|2010003K15Rik|75606|RIKEN cDNA 2010003K15 gene
mm9_v1_chr11_+_32105414_32105503	0.657583	FOX{I1,J2}.p2	AK019452|Snrnp25|78372|small nuclear ribonucleoprotein 25 (U11/U12)	NM_030093|Snrnp25|78372|small nuclear ribonucleoprotein 25 (U11/U12)	BC028766|Snrnp25|78372|small nuclear ribonucleoprotein 25 (U11/U12)
mm9_v1_chr17_+_17511515_17511560	0.655801	FOX{I1,J2}.p2	AK090011|Riok2|67045|RIO kinase 2 (yeast)	AK008385|Riok2|67045|RIO kinase 2 (yeast)	AK008451|Riok2|67045|RIO kinase 2 (yeast)	AK049232|Riok2|67045|RIO kinase 2 (yeast)	BC010781|Riok2|67045|RIO kinase 2 (yeast)
mm9_v1_chrX_+_108009728_108009803	0.654176	FOX{I1,J2}.p2	BC138657|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC145919|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC052012|Pou3f4|18994|POU domain, class 3, transcription factor 4	X66603|Pou3f4|18994|POU domain, class 3, transcription factor 4	AK158302|Pou3f4|18994|POU domain, class 3, transcription factor 4	BC086670|Pou3f4|18994|POU domain, class 3, transcription factor 4	NM_008901|Pou3f4|18994|POU domain, class 3, transcription factor 4
mm9_v1_chr2_+_90620127_90620146	0.652502	FOX{I1,J2}.p2	BC039616|Fnbp4|55935|formin binding protein 4
mm9_v1_chr13_+_21454688_21454753	0.649609	FOX{I1,J2}.p2	AK129138|Zscan12|22758|zinc finger and SCAN domain containing 12	NM_016684|Zscan12|22758|zinc finger and SCAN domain containing 12	AK075886|Zscan12|22758|zinc finger and SCAN domain containing 12	AK139837|Zscan12|22758|zinc finger and SCAN domain containing 12	AK142005|Zscan12|22758|zinc finger and SCAN domain containing 12	BC027041|Zscan12|22758|zinc finger and SCAN domain containing 12
mm9_v1_chr15_+_75799550_75799614	0.649131	FOX{I1,J2}.p2	AK137962|Zfp707|69020|zinc finger protein 707	NM_001081065|Zfp707|69020|zinc finger protein 707
mm9_v1_chr13_-_102462584_102462601	0.647664	FOX{I1,J2}.p2	AK046259|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	NM_001024955|Pik3r1|18708|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)
mm9_v1_chr3_+_95085263_95085296	0.647104	FOX{I1,J2}.p2	
mm9_v1_chr8_-_113426341_113426387	0.645983	FOX{I1,J2}.p2	AK140503|Fuk|234730|fucokinase	AK164340|Fuk|234730|fucokinase	AJ297482|Fuk|234730|fucokinase	AJ534942|Fuk|234730|fucokinase	AY223865|Fuk|234730|fucokinase	NM_172283|Fuk|234730|fucokinase	NM_181666|Fuk|234730|fucokinase	AK161763|Fuk|234730|fucokinase
mm9_v1_chr18_-_32071556_32071556	0.645414	FOX{I1,J2}.p2	NM_026006|Sft2d3|67158|SFT2 domain containing 3
mm9_v1_chr10_+_81590757_81590757	0.645097	FOX{I1,J2}.p2	AK137251|AU041133|216177|expressed sequence AU041133	NM_001163064|AU041133|216177|expressed sequence AU041133
mm9_v1_chr15_+_75799711_75799736	0.644022	FOX{I1,J2}.p2	AK005330|Zfp707|69020|zinc finger protein 707	AK153958|Zfp707|69020|zinc finger protein 707
mm9_v1_chr13_-_27530465_27530556	0.643606	FOX{I1,J2}.p2	AF090140|Prl8a6|19112|prolactin family 8, subfamily a, member 6	NM_011167|Prl8a6|19112|prolactin family 8, subfamily a, member 6	BC099469|Prl8a6|19112|prolactin family 8, subfamily a, member 6	AK005435|Prl8a6|19112|prolactin family 8, subfamily a, member 6	AK005478|Prl8a6|19112|prolactin family 8, subfamily a, member 6
mm9_v1_chr7_+_63305622_63305758	0.641472	FOX{I1,J2}.p2	AF071173|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2	AF061529|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm9_v1_chr4_-_95744206_95744236	0.640922	FOX{I1,J2}.p2	AK165473|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	AK165469|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	BC016446|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	AK143981|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	AK165405|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	AK143903|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	NM_145548|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13	AK162358|Cyp2j13|230459|cytochrome P450, family 2, subfamily j, polypeptide 13
mm9_v1_chr13_-_67182447_67182480	0.64003	FOX{I1,J2}.p2	BC089368|Zfp708|432769|zinc finger protein 708	AK132353|Zfp708|432769|zinc finger protein 708	NM_001012448|Zfp708|432769|zinc finger protein 708
mm9_v1_chr13_-_49748055_49748114	0.639998	FOX{I1,J2}.p2	AK014919|Cenpp|66336|centromere protein P	BC147207|Cenpp|66336|centromere protein P	BC147208|Cenpp|66336|centromere protein P	AK012863|Cenpp|66336|centromere protein P	NM_025495|Cenpp|66336|centromere protein P	AK006234|Cenpp|66336|centromere protein P
mm9_v1_chr5_-_141096711_141096848	0.639619	FOX{I1,J2}.p2	AK019322|Ttyh3|78339|tweety homolog 3 (Drosophila)
mm9_v1_chr4_+_6321713_6321979	0.63895	FOX{I1,J2}.p2	AK213873|Sdcbp|53378|syndecan binding protein
mm9_v1_chr7_+_17545027_17545143	0.637113	FOX{I1,J2}.p2	AK079661|Pnmal1|71691|PNMA-like 1	BC048228|Pnmal1|71691|PNMA-like 1	NM_001007569|Pnmal1|71691|PNMA-like 1
mm9_v1_chr4_+_88428034_88428034	0.635875	FOX{I1,J2}.p2	AK046550|Ifnz|319146|interferon zeta	NM_197889|Ifnz|319146|interferon zeta
mm9_v1_chr6_+_54251485_54251608	0.634386	FOX{I1,J2}.p2	
mm9_v1_chr7_+_50696151_50696185	0.632478	FOX{I1,J2}.p2	AK006929|Cldnd2|74276|claudin domain containing 2	BC128277|Cldnd2|74276|claudin domain containing 2	NM_028849|Cldnd2|74276|claudin domain containing 2
mm9_v1_chr9_+_15297853_15297875	0.632104	FOX{I1,J2}.p2	AK146267|BC017612|170748|cDNA sequence BC017612
mm9_v1_chr1_-_58480910_58480931	0.630958	FOX{I1,J2}.p2	NM_001042634|Clk1|12747|CDC-like kinase 1
mm9_v1_chr7_-_132634942_132634979	0.630733	FOX{I1,J2}.p2	AK009715|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	AK166410|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	AK160217|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	AK011011|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)
mm9_v1_chr1_-_174825081_174825085	0.630002	FOX{I1,J2}.p2	BC061125|Apcs|20219|serum amyloid P-component
mm9_v1_chr4_-_143490282_143490282	0.629593	FOX{I1,J2}.p2	NM_001085414|Pramef6|195555|PRAME family member 6
mm9_v1_chr5_-_141178143_141178224	0.62931	FOX{I1,J2}.p2	AK006472|Iqce|74239|IQ motif containing E	BC065128|Iqce|74239|IQ motif containing E
mm9_v1_chr16_+_22920274_22920459	0.629266	FOX{I1,J2}.p2	NM_001083904|Fetub|59083|fetuin beta	NM_021564|Fetub|59083|fetuin beta	AY138459|Fetub|59083|fetuin beta	AJ242927|Fetub|59083|fetuin beta
mm9_v1_chr11_-_106642357_106642481	0.628605	FOX{I1,J2}.p2	AK011169|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chr16_-_57292963_57292977	0.627312	FOX{I1,J2}.p2	AK161475|Tmem30c|71027|transmembrane protein 30C	NM_027651|Tmem30c|71027|transmembrane protein 30C	AK016747|Tmem30c|71027|transmembrane protein 30C	AK016597|Tmem30c|71027|transmembrane protein 30C
mm9_v1_chr2_-_24647157_24647300	0.626713	FOX{I1,J2}.p2	AK020308|Ehmt1|77683|euchromatic histone methyltransferase 1
mm9_v1_chr15_-_76554119_76554177	0.625998	FOX{I1,J2}.p2	AK186599|C030006K11Rik|223665|RIKEN cDNA C030006K11 gene
mm9_v1_chr6_-_71212223_71212274	0.625289	FOX{I1,J2}.p2	AK027936|Smyd1|12180|SET and MYND domain containing 1	AK076266|Smyd1|12180|SET and MYND domain containing 1	AK142153|Smyd1|12180|SET and MYND domain containing 1	U76373|Smyd1|12180|SET and MYND domain containing 1	U76374|Smyd1|12180|SET and MYND domain containing 1	AK142252|Smyd1|12180|SET and MYND domain containing 1	BC076601|Smyd1|12180|SET and MYND domain containing 1	NM_001160127|Smyd1|12180|SET and MYND domain containing 1	NM_009762|Smyd1|12180|SET and MYND domain containing 1
mm9_v1_chr10_-_80630456_80630508	0.624707	FOX{I1,J2}.p2	AK131903|Pias4|59004|protein inhibitor of activated STAT 4	AK076943|Pias4|59004|protein inhibitor of activated STAT 4	BC025159|Pias4|59004|protein inhibitor of activated STAT 4	NM_021501|Pias4|59004|protein inhibitor of activated STAT 4	AK131822|Pias4|59004|protein inhibitor of activated STAT 4	AK148066|Pias4|59004|protein inhibitor of activated STAT 4	AK147813|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr2_-_147872704_147872704	0.622965	FOX{I1,J2}.p2	NM_010446|Foxa2|15376|forkhead box A2	X74937|Foxa2|15376|forkhead box A2
mm9_v1_chr16_+_20611637_20611755	0.622623	FOX{I1,J2}.p2	AK007407|Ece2|107522|endothelin converting enzyme 2	AK007791|Ece2|107522|endothelin converting enzyme 2	BC115541|Ece2|107522|endothelin converting enzyme 2	BC115542|Ece2|107522|endothelin converting enzyme 2	NM_025462|Ece2|107522|endothelin converting enzyme 2	NM_177940|Ece2|107522|endothelin converting enzyme 2	NM_177941|Ece2|107522|endothelin converting enzyme 2
mm9_v1_chr14_+_31362306_31362551	0.622547	FOX{I1,J2}.p2	AK166763|Tkt|21881|transketolase	AK167084|Tkt|21881|transketolase	AK140965|Tkt|21881|transketolase	AK030446|Tkt|21881|transketolase	NM_009388|Tkt|21881|transketolase	AK152460|Tkt|21881|transketolase	AK002627|Tkt|21881|transketolase	AK012794|Tkt|21881|transketolase	AK145677|Tkt|21881|transketolase	AK150139|Tkt|21881|transketolase	AK150901|Tkt|21881|transketolase	AK159922|Tkt|21881|transketolase	U05809|Tkt|21881|transketolase	AK050793|Tkt|21881|transketolase	AK146157|Tkt|21881|transketolase	AK144146|Tkt|21881|transketolase	AK150769|Tkt|21881|transketolase	AK150844|Tkt|21881|transketolase	AK150856|Tkt|21881|transketolase	AK152245|Tkt|21881|transketolase	AK151916|Tkt|21881|transketolase	AK151969|Tkt|21881|transketolase	AK152886|Tkt|21881|transketolase	BC055336|Tkt|21881|transketolase	AK216935|Tkt|21881|transketolase	AK181952|Tkt|21881|transketolase
mm9_v1_chr2_+_11564418_11564614	0.622074	FOX{I1,J2}.p2	NM_008367|Il2ra|16184|interleukin 2 receptor, alpha chain	AK037369|Il2ra|16184|interleukin 2 receptor, alpha chain	AK041350|Il2ra|16184|interleukin 2 receptor, alpha chain	AK088594|Il2ra|16184|interleukin 2 receptor, alpha chain	AK168113|Il2ra|16184|interleukin 2 receptor, alpha chain	AK171665|Il2ra|16184|interleukin 2 receptor, alpha chain	M30856|Il2ra|16184|interleukin 2 receptor, alpha chain	BC114437|Il2ra|16184|interleukin 2 receptor, alpha chain	K02891|Il2ra|16184|interleukin 2 receptor, alpha chain	M54934|Il2ra|16184|interleukin 2 receptor, alpha chain
mm9_v1_chr3_-_90894726_90894726	0.621635	FOX{I1,J2}.p2	AK078932|9130204L05Rik|229550|RIKEN cDNA 9130204L05 gene	NM_001101461|9130204L05Rik|229550|RIKEN cDNA 9130204L05 gene
mm9_v1_chr9_-_57531452_57531467	0.62107	FOX{I1,J2}.p2	BC054827|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2	K02589|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2	NM_009993|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2	X00479|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2
mm9_v1_chr4_+_13678443_13678575	0.620746	FOX{I1,J2}.p2	NM_001111027|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr18_-_78006491_78006518	0.620693	FOX{I1,J2}.p2	AK076912|Haus1|225745|HAUS augmin-like complex, subunit 1	AK146923|Haus1|225745|HAUS augmin-like complex, subunit 1	BC024400|Haus1|225745|HAUS augmin-like complex, subunit 1	NM_146089|Haus1|225745|HAUS augmin-like complex, subunit 1
mm9_v1_chr16_-_17561311_17561339	0.618499	FOX{I1,J2}.p2	AK143245|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK039092|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	BC115678|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	BC115679|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK132588|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK161226|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	NM_001145435|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	NM_029053|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene
mm9_v1_chr11_+_120469790_120469822	0.618486	FOX{I1,J2}.p2	AK141698|Npb|208990|neuropeptide B	NM_153288|Npb|208990|neuropeptide B	AB085945|Npb|208990|neuropeptide B	BC134361|Npb|208990|neuropeptide B
mm9_v1_chr7_-_121706466_121706500	0.617961	FOX{I1,J2}.p2	AK050453|Cyp2r1|244209|cytochrome P450, family 2, subfamily r, polypeptide 1	BC108962|Cyp2r1|244209|cytochrome P450, family 2, subfamily r, polypeptide 1	AY323818|Cyp2r1|244209|cytochrome P450, family 2, subfamily r, polypeptide 1	BC108961|Cyp2r1|244209|cytochrome P450, family 2, subfamily r, polypeptide 1	NM_177382|Cyp2r1|244209|cytochrome P450, family 2, subfamily r, polypeptide 1
mm9_v1_chr2_-_155266518_155266522	0.617648	FOX{I1,J2}.p2	BC083187|Ncoa6|56406|nuclear receptor coactivator 6	NM_019825|Ncoa6|56406|nuclear receptor coactivator 6	BC031113|Ncoa6|56406|nuclear receptor coactivator 6
mm9_v1_chr9_+_88475873_88475994	0.615008	FOX{I1,J2}.p2	AK145647|Trim43a|547109|tripartite motif-containing 43A	NM_001034906|Trim43a|547109|tripartite motif-containing 43A	AK166678|Trim43a|547109|tripartite motif-containing 43A	BC141236|Trim43a|547109|tripartite motif-containing 43A
mm9_v1_chr18_+_36687800_36687810	0.614544	FOX{I1,J2}.p2	AK143939|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK085424|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK128930|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK142545|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	AK085269|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	NM_172830|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	BC113179|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9	BC113785|Slc4a9|240215|solute carrier family 4, sodium bicarbonate cotransporter, member 9
mm9_v1_chr5_-_38952934_38952968	0.614141	FOX{I1,J2}.p2	AK004644|Wdr1|22388|WD repeat domain 1
mm9_v1_chr17_-_36098718_36098770	0.613468	FOX{I1,J2}.p2	AK145549|Abcf1|224742|ATP-binding cassette, sub-family F (GCN20), member 1
mm9_v1_chr3_+_30645214_30645214	0.611289	FOX{I1,J2}.p2	AK044227|Samd7|75953|sterile alpha motif domain containing 7	NM_029489|Samd7|75953|sterile alpha motif domain containing 7
mm9_v1_chr7_+_5626844_5626923	0.609595	FOX{I1,J2}.p2	BC147681|Vmn1r62|81016|vomeronasal 1 receptor 62	BC147684|Vmn1r62|81016|vomeronasal 1 receptor 62	NM_001167567|Vmn1r186|100039479|vomeronasal 1 receptor Vmn1r186
mm9_v1_chr14_-_9498752_9498831	0.609591	FOX{I1,J2}.p2	AK016701|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene	BC064468|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene	AK019627|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene	AK050783|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene	AK133893|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene	NM_028934|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene	AK047451|4930452B06Rik|74430|RIKEN cDNA 4930452B06 gene
mm9_v1_chr6_-_118369383_118369491	0.608445	FOX{I1,J2}.p2	AK133013|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK129082|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK135031|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK028266|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	BC057054|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	NM_194339|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK134315|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)	AK162178|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)
mm9_v1_chr9_+_110558996_110559065	0.60823	FOX{I1,J2}.p2	AK012610|Ccdc12|72654|coiled-coil domain containing 12	NM_028312|Ccdc12|72654|coiled-coil domain containing 12	BC026668|Ccdc12|72654|coiled-coil domain containing 12
mm9_v1_chr8_+_19784703_19784741	0.608177	FOX{I1,J2}.p2	AK132389|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK167066|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK083828|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK033345|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK170069|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	BC064022|2610005L07Rik|381598|cadherin 11 pseudogene
mm9_v1_chr13_+_20885976_20886097	0.607535	FOX{I1,J2}.p2	AK084452|Aoah|27052|acyloxyacyl hydrolase	NM_012054|Aoah|27052|acyloxyacyl hydrolase	AK033474|Aoah|27052|acyloxyacyl hydrolase	AK170293|Aoah|27052|acyloxyacyl hydrolase	BC089580|Aoah|27052|acyloxyacyl hydrolase	AK150886|Aoah|27052|acyloxyacyl hydrolase	AK152346|Aoah|27052|acyloxyacyl hydrolase	AK085343|Aoah|27052|acyloxyacyl hydrolase	AK133301|Aoah|27052|acyloxyacyl hydrolase	AK152985|Aoah|27052|acyloxyacyl hydrolase
mm9_v1_chr1_-_174825067_174825072	0.607329	FOX{I1,J2}.p2	AK144248|Apcs|20219|serum amyloid P-component	AK165699|Apcs|20219|serum amyloid P-component
mm9_v1_chr13_+_50513207_50513274	0.607131	FOX{I1,J2}.p2	AK135553|Fbxw17|109082|F-box and WD-40 domain protein 17	BC040428|Fbxw17|109082|F-box and WD-40 domain protein 17	NM_175401|Fbxw17|109082|F-box and WD-40 domain protein 17	AK155157|Fbxw17|109082|F-box and WD-40 domain protein 17
mm9_v1_chrX_+_43682183_43682208	0.606917	FOX{I1,J2}.p2	AK006855|Actrt1|73360|actin-related protein T1	NM_028514|Actrt1|73360|actin-related protein T1	BC116431|Actrt1|73360|actin-related protein T1	BC116432|Actrt1|73360|actin-related protein T1
mm9_v1_chr4_+_88481428_88481428	0.606826	FOX{I1,J2}.p2	BC120910|Ifna5|15968|interferon alpha 5	BC120911|Ifna5|15968|interferon alpha 5	NM_010505|Ifna5|15968|interferon alpha 5
mm9_v1_chr19_-_21028691_21028691	0.605861	FOX{I1,J2}.p2	AF417579|Tmc1|13409|transmembrane channel-like gene family 1	NM_028953|Tmc1|13409|transmembrane channel-like gene family 1
mm9_v1_chr7_+_26444141_26444250	0.605036	FOX{I1,J2}.p2	NM_138586|Exosc5|27998|exosome component 5	AK007372|Exosc5|27998|exosome component 5	AK137780|Exosc5|27998|exosome component 5	AK006475|Exosc5|27998|exosome component 5	AK155228|Exosc5|27998|exosome component 5	BC092393|Exosc5|27998|exosome component 5	BC034358|Exosc5|27998|exosome component 5
mm9_v1_chr13_+_77847947_77848021	0.604047	FOX{I1,J2}.p2	NM_001163419|Fam172a|68675|family with sequence similarity 172, member A	NM_001163420|Fam172a|68675|family with sequence similarity 172, member A	NM_138312|Fam172a|68675|family with sequence similarity 172, member A	AK165273|Fam172a|68675|family with sequence similarity 172, member A	AK052419|Fam172a|68675|family with sequence similarity 172, member A	AK166285|Fam172a|68675|family with sequence similarity 172, member A	BC057380|Fam172a|68675|family with sequence similarity 172, member A	AK049727|Fam172a|68675|family with sequence similarity 172, member A	AF064782|Fam172a|68675|family with sequence similarity 172, member A	AK081188|Fam172a|68675|family with sequence similarity 172, member A
mm9_v1_chr3_-_108365049_108365097	0.603598	FOX{I1,J2}.p2	AK155399|Tmem167b|67495|transmembrane protein 167B
mm9_v1_chr9_-_13631482_13631562	0.603474	FOX{I1,J2}.p2	BC056968|Cep57|74360|centrosomal protein 57	AY251192|Cep57|74360|centrosomal protein 57	AK014873|Cep57|74360|centrosomal protein 57	BC030353|Cep57|74360|centrosomal protein 57	AK129053|Cep57|74360|centrosomal protein 57	NM_026665|Cep57|74360|centrosomal protein 57
mm9_v1_chr7_+_52661329_52661329	0.601966	FOX{I1,J2}.p2	NM_010596|Kcna7|16495|potassium voltage-gated channel, shaker-related subfamily, member 7
mm9_v1_chrX_-_146747906_146747906	0.60182	FOX{I1,J2}.p2	NM_001101501|Gm15104|333588|predicted gene 15104
mm9_v1_chr12_-_29267347_29267379	0.601544	FOX{I1,J2}.p2	AF278712|Allc|94041|allantoicase	BC108957|Allc|94041|allantoicase	BC108958|Allc|94041|allantoicase	NM_053156|Allc|94041|allantoicase	AK005893|Allc|94041|allantoicase
mm9_v1_chr15_+_10994444_10994583	0.597621	FOX{I1,J2}.p2	AK145096|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK135354|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	NM_175501|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK054015|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	AK048612|Adamts12|239337|a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12
mm9_v1_chr4_+_155186568_155186886	0.597551	FOX{I1,J2}.p2	NM_207678|Ccnl2|56036|cyclin L2	AK007552|Ccnl2|56036|cyclin L2	BC132295|Ccnl2|56036|cyclin L2	AK048244|Ccnl2|56036|cyclin L2	AK156037|Ccnl2|56036|cyclin L2	AB041605|Ccnl2|56036|cyclin L2	AY337018|Ccnl2|56036|cyclin L2	AK169857|Ccnl2|56036|cyclin L2	BC023747|Ccnl2|56036|cyclin L2	AF211859|Ccnl2|56036|cyclin L2	AK044204|Ccnl2|56036|cyclin L2	AK008585|Ccnl2|56036|cyclin L2	AK138938|Ccnl2|56036|cyclin L2
mm9_v1_chr4_-_120861138_120861138	0.596697	FOX{I1,J2}.p2	NM_001081013|Rlf|109263|rearranged L-myc fusion sequence
mm9_v1_chr4_+_151307819_151307875	0.595535	FOX{I1,J2}.p2	NM_172704|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK089983|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK053156|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK156793|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK171781|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK172542|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC075619|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC085257|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC079852|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11
mm9_v1_chr13_-_104554635_104554661	0.594834	FOX{I1,J2}.p2	AK081447|Srsf12|218543|serine/arginine-rich splicing factor 12	AK037115|Srsf12|218543|serine/arginine-rich splicing factor 12	AK033354|Srsf12|218543|serine/arginine-rich splicing factor 12	NM_172592|Srsf12|218543|serine/arginine-rich splicing factor 12
mm9_v1_chr15_+_9001008_9001083	0.594501	FOX{I1,J2}.p2	AK046666|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene	NM_001040395|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene	NM_001085410|1110020G09Rik|68646|RIKEN cDNA 1110020G09 gene
mm9_v1_chr17_+_72022598_72022608	0.592374	FOX{I1,J2}.p2	NM_177087|Fam179a|320159|family with sequence similarity 179, member A
mm9_v1_chr15_+_89259892_89260019	0.592098	FOX{I1,J2}.p2	AK083297|C730034F03Rik|319362|RIKEN cDNA C730034F03 gene	AK053866|C730034F03Rik|319362|RIKEN cDNA C730034F03 gene
mm9_v1_chr3_+_14641726_14641789	0.591047	FOX{I1,J2}.p2	AK162621|Car13|71934|carbonic anhydrase 13	NM_024495|Car13|71934|carbonic anhydrase 13	AK153080|Car13|71934|carbonic anhydrase 13	AK153353|Car13|71934|carbonic anhydrase 13	AK010166|Car13|71934|carbonic anhydrase 13	AK150871|Car13|71934|carbonic anhydrase 13	AK150897|Car13|71934|carbonic anhydrase 13	AK151978|Car13|71934|carbonic anhydrase 13	BC064050|Car13|71934|carbonic anhydrase 13	AF231123|Car13|71934|carbonic anhydrase 13	AK152124|Car13|71934|carbonic anhydrase 13	AK153258|Car13|71934|carbonic anhydrase 13	AK151519|Car13|71934|carbonic anhydrase 13
mm9_v1_chr7_+_25421586_25421602	0.590856	FOX{I1,J2}.p2	BC003749|Lypd3|72434|Ly6/Plaur domain containing 3	BC016549|Lypd3|72434|Ly6/Plaur domain containing 3	NM_133743|Lypd3|72434|Ly6/Plaur domain containing 3
mm9_v1_chr11_-_99671205_99671209	0.590714	FOX{I1,J2}.p2	AK009035|Krtap4-13|69464|keratin associated protein 4-13	BC104358|Gm11554|670482|predicted gene 11554	BC104359|Gm11554|670482|predicted gene 11554	BC119472|Gm11554|670482|predicted gene 11554	BC119473|Gm11554|670482|predicted gene 11554	NM_001099313|Gm11554|670482|predicted gene 11554	NM_027087|Krtap4-13|69464|keratin associated protein 4-13
mm9_v1_chr7_+_86040793_86040943	0.59067	FOX{I1,J2}.p2	AK031972|Aen|68048|apoptosis enhancing nuclease	NM_001162939|Aen|68048|apoptosis enhancing nuclease	NM_026531|Aen|68048|apoptosis enhancing nuclease	AK165708|Aen|68048|apoptosis enhancing nuclease	AK012555|Aen|68048|apoptosis enhancing nuclease	AK090056|Aen|68048|apoptosis enhancing nuclease	AK166806|Aen|68048|apoptosis enhancing nuclease	AK167042|Aen|68048|apoptosis enhancing nuclease	AK076421|Aen|68048|apoptosis enhancing nuclease	AK167658|Aen|68048|apoptosis enhancing nuclease	AK017644|Aen|68048|apoptosis enhancing nuclease	AK089090|Aen|68048|apoptosis enhancing nuclease	BC022614|Aen|68048|apoptosis enhancing nuclease
mm9_v1_chr7_+_112553081_112553135	0.588651	FOX{I1,J2}.p2	AK136723|Cnga4|233649|cyclic nucleotide gated channel alpha 4	NM_001033317|Cnga4|233649|cyclic nucleotide gated channel alpha 4	BC107347|Cnga4|233649|cyclic nucleotide gated channel alpha 4	BC107348|Cnga4|233649|cyclic nucleotide gated channel alpha 4
mm9_v1_chr3_-_94240497_94240537	0.586986	FOX{I1,J2}.p2	AB045835|Oaz3|53814|ornithine decarboxylase antizyme 3	BC119339|Oaz3|53814|ornithine decarboxylase antizyme 3	BC119341|Oaz3|53814|ornithine decarboxylase antizyme 3	AK006116|Oaz3|53814|ornithine decarboxylase antizyme 3	AK006634|Oaz3|53814|ornithine decarboxylase antizyme 3	AK076942|Oaz3|53814|ornithine decarboxylase antizyme 3	AF175297|Oaz3|53814|ornithine decarboxylase antizyme 3	NM_016901|Oaz3|53814|ornithine decarboxylase antizyme 3
mm9_v1_chr3_-_130412297_130412356	0.585934	FOX{I1,J2}.p2	AK011085|Ostc|66357|oligosaccharyltransferase complex subunit	AK017845|Ostc|66357|oligosaccharyltransferase complex subunit	AK135332|Ostc|66357|oligosaccharyltransferase complex subunit	AK013011|Ostc|66357|oligosaccharyltransferase complex subunit	AK032969|Ostc|66357|oligosaccharyltransferase complex subunit	AK009237|Ostc|66357|oligosaccharyltransferase complex subunit	BC014799|Ostc|66357|oligosaccharyltransferase complex subunit	BC021935|Ostc|66357|oligosaccharyltransferase complex subunit
mm9_v1_chr2_-_172284055_172284095	0.584512	FOX{I1,J2}.p2	BC139073|Gcnt7|654821|glucosaminyl (N-acetyl) transferase family member 7	BC139076|Gcnt7|654821|glucosaminyl (N-acetyl) transferase family member 7	AK039414|Gcnt7|654821|glucosaminyl (N-acetyl) transferase family member 7	NM_001039560|Gcnt7|654821|glucosaminyl (N-acetyl) transferase family member 7
mm9_v1_chr2_-_51790163_51790163	0.584349	FOX{I1,J2}.p2	NM_001141982|Rbm43|71684|RNA binding motif protein 43
mm9_v1_chr9_+_77961044_77961183	0.583798	FOX{I1,J2}.p2	NM_019987|Ick|56542|intestinal cell kinase	AK045950|Ick|56542|intestinal cell kinase	AK164613|Ick|56542|intestinal cell kinase	AK008991|Ick|56542|intestinal cell kinase	AK133537|Ick|56542|intestinal cell kinase	AK087484|Ick|56542|intestinal cell kinase
mm9_v1_chr6_+_30462285_30462303	0.582535	FOX{I1,J2}.p2	NM_029373|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene	AK006332|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene
mm9_v1_chr11_-_42134509_42134538	0.58149	FOX{I1,J2}.p2	X51986|Gabra6|14399|gamma-aminobutyric acid (GABA) A receptor, subunit alpha 6
mm9_v1_chrX_+_136916509_136916509	0.58119	FOX{I1,J2}.p2	AK047241|Frmpd3|245643|FERM and PDZ domain containing 3	NM_177750|Frmpd3|245643|FERM and PDZ domain containing 3
mm9_v1_chr13_-_23515682_23515773	0.581043	FOX{I1,J2}.p2	AB021860|Abt1|30946|activator of basal transcription 1	AK019220|Abt1|30946|activator of basal transcription 1	AK019221|Abt1|30946|activator of basal transcription 1	BC082609|Abt1|30946|activator of basal transcription 1	AK009557|Abt1|30946|activator of basal transcription 1	AK029222|Abt1|30946|activator of basal transcription 1	NM_013924|Abt1|30946|activator of basal transcription 1
mm9_v1_chr5_-_141178229_141178331	0.580184	FOX{I1,J2}.p2	AK029333|Iqce|74239|IQ motif containing E	BC059223|Iqce|74239|IQ motif containing E	NM_028833|Iqce|74239|IQ motif containing E
mm9_v1_chr5_+_25005506_25005758	0.579427	FOX{I1,J2}.p2	AK149324|4831440E17Rik|320965|RIKEN cDNA 4831440E17 gene	AK029244|4831440E17Rik|320965|RIKEN cDNA 4831440E17 gene
mm9_v1_chr1_+_20720985_20720998	0.577379	FOX{I1,J2}.p2	AK040420|Il17a|16171|interleukin 17A	BC119303|Il17a|16171|interleukin 17A	BC119309|Il17a|16171|interleukin 17A	NM_010552|Il17a|16171|interleukin 17A	U43088|Il17a|16171|interleukin 17A
mm9_v1_chr14_+_18814157_18814390	0.575903	FOX{I1,J2}.p2	BC089035|Thrb|21834|thyroid hormone receptor beta	NM_009380|Thrb|21834|thyroid hormone receptor beta	BC119553|Thrb|21834|thyroid hormone receptor beta	BC119552|Thrb|21834|thyroid hormone receptor beta	S62758|Thrb|21834|thyroid hormone receptor beta	AB221613|Thrb|21834|thyroid hormone receptor beta
mm9_v1_chr9_-_56995928_56996111	0.574611	FOX{I1,J2}.p2	AK155405|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	AK013322|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	BC043297|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)	BC034873|Neil1|72774|nei endonuclease VIII-like 1 (E. coli)
mm9_v1_chr9_-_99469275_99469317	0.574606	FOX{I1,J2}.p2	BC038866|Armc8|74125|armadillo repeat containing 8	AK004793|Armc8|74125|armadillo repeat containing 8	NM_001166138|Armc8|74125|armadillo repeat containing 8	NM_028768|Armc8|74125|armadillo repeat containing 8
mm9_v1_chr6_-_127076410_127076426	0.574524	FOX{I1,J2}.p2	AK011225|Ccnd2|12444|cyclin D2
mm9_v1_chr10_-_60561763_60561769	0.573982	FOX{I1,J2}.p2	
mm9_v1_chr9_-_57531425_57531441	0.571728	FOX{I1,J2}.p2	X04283|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2	BC018298|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2
mm9_v1_chr4_-_147242827_147242827	0.570118	FOX{I1,J2}.p2	FJ618908|Miip|28010|migration and invasion inhibitory protein	NM_001025365|Miip|28010|migration and invasion inhibitory protein
mm9_v1_chr12_-_103151331_103151476	0.566266	FOX{I1,J2}.p2	AK077954|Trip11|109181|thyroid hormone receptor interactor 11	AK081763|Trip11|109181|thyroid hormone receptor interactor 11	AK014103|Trip11|109181|thyroid hormone receptor interactor 11	AK148294|Trip11|109181|thyroid hormone receptor interactor 11	AK012112|Trip11|109181|thyroid hormone receptor interactor 11	NM_028446|Trip11|109181|thyroid hormone receptor interactor 11	BC158098|Trip11|109181|thyroid hormone receptor interactor 11
mm9_v1_chr3_+_103811134_103811169	0.56593	FOX{I1,J2}.p2	
mm9_v1_chr16_-_33967064_33967149	0.565231	FOX{I1,J2}.p2	BC003887|Umps|22247|uridine monophosphate synthetase	BC095981|Umps|22247|uridine monophosphate synthetase	AK159808|Umps|22247|uridine monophosphate synthetase	AK159955|Umps|22247|uridine monophosphate synthetase	AK035821|Umps|22247|uridine monophosphate synthetase	AK035997|Umps|22247|uridine monophosphate synthetase	AK090102|Umps|22247|uridine monophosphate synthetase	AK135187|Umps|22247|uridine monophosphate synthetase	NM_009471|Umps|22247|uridine monophosphate synthetase
mm9_v1_chr11_+_3102585_3102764	0.562639	FOX{I1,J2}.p2	NM_023743|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	AK090363|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	BC033410|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	AB031388|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1
mm9_v1_chr17_+_23949101_23949124	0.562555	FOX{I1,J2}.p2	AK081577|Srrm2|75956|serine/arginine repetitive matrix 2
mm9_v1_chr1_+_65357830_65357830	0.562498	FOX{I1,J2}.p2	AK045576|Pth2r|213527|parathyroid hormone 2 receptor	NM_139270|Pth2r|213527|parathyroid hormone 2 receptor
mm9_v1_chr15_-_82953171_82953235	0.562394	FOX{I1,J2}.p2	AK036247|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK159553|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK003698|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK168850|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK153565|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK032596|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK146821|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK168189|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	AK088456|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)	NM_029101|Rrp7a|74778|ribosomal RNA processing 7 homolog A (S. cerevisiae)
mm9_v1_chr4_-_141567551_141567551	0.561276	FOX{I1,J2}.p2	NM_177868|Fhad1|329977|forkhead-associated (FHA) phosphopeptide binding domain 1
mm9_v1_chr5_+_9100681_9100767	0.560146	FOX{I1,J2}.p2	AK140314|4930420K17Rik|652925|RIKEN cDNA 4930420K17 gene	NM_001081029|4930420K17Rik|652925|RIKEN cDNA 4930420K17 gene	AK087170|4930420K17Rik|652925|RIKEN cDNA 4930420K17 gene
mm9_v1_chr12_+_85441603_85441781	0.559144	FOX{I1,J2}.p2	AY999300|Acot6|217700|acyl-CoA thioesterase 6	NM_172580|Acot6|217700|acyl-CoA thioesterase 6	BC139306|Acot6|217700|acyl-CoA thioesterase 6	BC139328|Acot6|217700|acyl-CoA thioesterase 6	AK163605|Acot6|217700|acyl-CoA thioesterase 6	AK014558|Acot6|217700|acyl-CoA thioesterase 6	AK047479|Acot6|217700|acyl-CoA thioesterase 6	AK135361|Acot6|217700|acyl-CoA thioesterase 6	BC002159|Acot6|217700|acyl-CoA thioesterase 6
mm9_v1_chr8_-_41372306_41372306	0.558236	FOX{I1,J2}.p2	AK052233|Fgf20|80857|fibroblast growth factor 20	NM_030610|Fgf20|80857|fibroblast growth factor 20
mm9_v1_chr7_-_24993103_24993167	0.556554	FOX{I1,J2}.p2	BC005456|Zfp111|56707|zinc finger protein 111	AK135436|Zfp111|56707|zinc finger protein 111	NM_019940|Zfp111|56707|zinc finger protein 111
mm9_v1_chr15_+_76210904_76210993	0.556495	FOX{I1,J2}.p2	AK036810|Heatr7a|223658|HEAT repeat containing 7A	NM_175457|Heatr7a|223658|HEAT repeat containing 7A	AK170702|Heatr7a|223658|HEAT repeat containing 7A	AK090131|Heatr7a|223658|HEAT repeat containing 7A	AK147808|Heatr7a|223658|HEAT repeat containing 7A	AK147897|Heatr7a|223658|HEAT repeat containing 7A	AK038863|Heatr7a|223658|HEAT repeat containing 7A	AK052153|Heatr7a|223658|HEAT repeat containing 7A
mm9_v1_chr10_+_23571267_23571295	0.555645	FOX{I1,J2}.p2	NM_011979|Vnn3|26464|vanin 3	AJ132103|Vnn3|26464|vanin 3	BC111521|Vnn3|26464|vanin 3
mm9_v1_chr5_-_135382602_135382602	0.555412	FOX{I1,J2}.p2	AK007170|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	AY369079|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	AY369080|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	BC114542|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	NM_029681|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)	NM_194065|Wbscr28|76629|Williams-Beuren syndrome chromosome region 28 (human)
mm9_v1_chr10_-_26094990_26095024	0.555117	FOX{I1,J2}.p2	AK045667|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	NM_172787|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	AK049597|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr15_+_5135524_5135559	0.55474	FOX{I1,J2}.p2	AK050426|Ttc33|67515|tetratricopeptide repeat domain 33	AK010758|Ttc33|67515|tetratricopeptide repeat domain 33	BC061018|Ttc33|67515|tetratricopeptide repeat domain 33	NM_026213|Ttc33|67515|tetratricopeptide repeat domain 33
mm9_v1_chr1_-_138856866_138857085	0.554223	FOX{I1,J2}.p2	AB221629|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	BC137845|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	M81385|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2	NM_030676|Nr5a2|26424|nuclear receptor subfamily 5, group A, member 2
mm9_v1_chr6_-_30340952_30341009	0.552469	FOX{I1,J2}.p2	BC037445|Zc3hc1|232679|zinc finger, C3HC type 1	AJ537495|Zc3hc1|232679|zinc finger, C3HC type 1	AK151694|Zc3hc1|232679|zinc finger, C3HC type 1	BC050141|Zc3hc1|232679|zinc finger, C3HC type 1	AK088527|Zc3hc1|232679|zinc finger, C3HC type 1	AK167465|Zc3hc1|232679|zinc finger, C3HC type 1	NM_172735|Zc3hc1|232679|zinc finger, C3HC type 1
mm9_v1_chr6_-_83075022_83075189	0.551801	FOX{I1,J2}.p2	NM_023547|Ino80b|70020|INO80 complex subunit B	BC019383|Ino80b|70020|INO80 complex subunit B	BC047990|Ino80b|70020|INO80 complex subunit B	BC058788|Ino80b|70020|INO80 complex subunit B	AK010946|Ino80b|70020|INO80 complex subunit B
mm9_v1_chr2_+_152495244_152495317	0.551185	FOX{I1,J2}.p2	AK051151|H13|14950|histocompatibility 13	AK050664|H13|14950|histocompatibility 13	AK171790|H13|14950|histocompatibility 13	AF515662|H13|14950|histocompatibility 13
mm9_v1_chr3_+_92748407_92748407	0.551169	FOX{I1,J2}.p2	AF176515|Lce3c|94060|late cornified envelope 3C	AK009036|Lce3c|94060|late cornified envelope 3C	NM_033175|Lce3c|94060|late cornified envelope 3C
mm9_v1_chr8_-_66684789_66684808	0.550254	FOX{I1,J2}.p2	NM_009390|Tll1|21892|tolloid-like	U34042|Tll1|21892|tolloid-like	AK080919|Tll1|21892|tolloid-like
mm9_v1_chr9_-_51137021_51137021	0.550241	FOX{I1,J2}.p2	AK007796|1810046K07Rik|69809|RIKEN cDNA 1810046K07 gene	NM_027217|1810046K07Rik|69809|RIKEN cDNA 1810046K07 gene
mm9_v1_chr8_+_123651742_123651861	0.549691	FOX{I1,J2}.p2	BC137805|Foxl1|14241|forkhead box L1	BC137806|Foxl1|14241|forkhead box L1	AB221616|Foxl1|14241|forkhead box L1
mm9_v1_chr3_+_41419561_41419606	0.545635	FOX{I1,J2}.p2	AK040146|Phf17|269424|PHD finger protein 17
mm9_v1_chr1_+_162125349_162125420	0.54526	FOX{I1,J2}.p2	AK007673|Mrps14|64659|mitochondrial ribosomal protein S14	AK010242|Mrps14|64659|mitochondrial ribosomal protein S14	AK144195|Mrps14|64659|mitochondrial ribosomal protein S14	AK083352|Mrps14|64659|mitochondrial ribosomal protein S14	NM_025474|Mrps14|64659|mitochondrial ribosomal protein S14	BC044057|Mrps14|64659|mitochondrial ribosomal protein S14
mm9_v1_chr4_+_144482979_144483095	0.541592	FOX{I1,J2}.p2	AK032958|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	X95281|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	AK151419|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_011303|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	BC013540|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr17_+_80615253_80615253	0.541472	FOX{I1,J2}.p2	BC118946|Ttc39d|67737|tetratricopeptide repeat domain 39D	BC118947|Ttc39d|67737|tetratricopeptide repeat domain 39D	NM_026351|Ttc39d|67737|tetratricopeptide repeat domain 39D
mm9_v1_chr7_-_53285651_53285671	0.541103	FOX{I1,J2}.p2	AB028737|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	BC040400|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	EF109740|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	EF109741|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	NM_018795|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6
mm9_v1_chr8_-_25836259_25836296	0.53951	FOX{I1,J2}.p2	BC049609|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)	BC060975|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)	BC129920|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)	NM_009619|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)	X64227|Adam3|11497|a disintegrin and metallopeptidase domain 3 (cyritestin)
mm9_v1_chr7_-_97052120_97052138	0.537705	FOX{I1,J2}.p2	AK014876|Ccdc81|70884|coiled-coil domain containing 81	BC127049|Ccdc81|70884|coiled-coil domain containing 81	BC152307|Ccdc81|70884|coiled-coil domain containing 81	BC152308|Ccdc81|70884|coiled-coil domain containing 81	AK029544|Ccdc81|70884|coiled-coil domain containing 81	NM_001162979|Ccdc81|70884|coiled-coil domain containing 81
mm9_v1_chr6_+_47785659_47785733	0.536606	FOX{I1,J2}.p2	AK046208|Zfp398|272347|zinc finger protein 398	NM_027477|Zfp398|272347|zinc finger protein 398	NM_173034|Zfp398|272347|zinc finger protein 398	AK017770|Zfp398|272347|zinc finger protein 398	AK078250|Zfp398|272347|zinc finger protein 398	AK089190|Zfp398|272347|zinc finger protein 398	AK155461|Zfp398|272347|zinc finger protein 398	AK081169|Zfp398|272347|zinc finger protein 398	BC112382|Zfp398|272347|zinc finger protein 398
mm9_v1_chr14_-_56262642_56262642	0.536224	FOX{I1,J2}.p2	AK004754|Tm9sf1|74140|transmembrane 9 superfamily member 1	NM_028780|Tm9sf1|74140|transmembrane 9 superfamily member 1
mm9_v1_chr9_+_117161650_117161701	0.535287	FOX{I1,J2}.p2	
mm9_v1_chr1_-_98894136_98894144	0.534734	FOX{I1,J2}.p2	NM_001039475|Slco6b1|67854|solute carrier organic anion transporter family, member 6b1	AK016463|Slco6b1|67854|solute carrier organic anion transporter family, member 6b1	AY461596|Slco6b1|67854|solute carrier organic anion transporter family, member 6b1
mm9_v1_chr1_+_7162595_7162622	0.532834	FOX{I1,J2}.p2	AK018402|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm9_v1_chr6_-_125181731_125181877	0.532798	FOX{I1,J2}.p2	BC094656|Tapbpl|213233|TAP binding protein-like	BC017613|Tapbpl|213233|TAP binding protein-like	NM_145391|Tapbpl|213233|TAP binding protein-like
mm9_v1_chr8_+_83017933_83017964	0.532671	FOX{I1,J2}.p2	AK145998|Gypa|14934|glycophorin A	AK157851|Gypa|14934|glycophorin A	NM_010369|Gypa|14934|glycophorin A	AK162614|Gypa|14934|glycophorin A
mm9_v1_chr2_+_24201033_24201038	0.53221	FOX{I1,J2}.p2	S64082|Il1rn|16181|interleukin 1 receptor antagonist
mm9_v1_chr3_-_83645498_83645507	0.532123	FOX{I1,J2}.p2	AK154504|Tlr2|24088|toll-like receptor 2
mm9_v1_chr10_-_13108775_13108775	0.531477	FOX{I1,J2}.p2	AK139466|Phactr2|215789|phosphatase and actin regulator 2	NM_001195066|Phactr2|215789|phosphatase and actin regulator 2
mm9_v1_chr6_+_128921177_128921181	0.531452	FOX{I1,J2}.p2	AY137341|Clec2g|70809|C-type lectin domain family 2, member g	AY137342|Clec2g|70809|C-type lectin domain family 2, member g	NM_001168223|Clec2g|70809|C-type lectin domain family 2, member g	NM_001168224|Clec2g|70809|C-type lectin domain family 2, member g	AK137753|Clec2g|70809|C-type lectin domain family 2, member g
mm9_v1_chr6_-_138028436_138028436	0.531252	FOX{I1,J2}.p2	NM_177787|Slc15a5|277898|solute carrier family 15, member 5
mm9_v1_chr1_-_156993820_156993943	0.529383	FOX{I1,J2}.p2	AF010448|Mr1|15064|major histocompatibility complex, class I-related	AF010449|Mr1|15064|major histocompatibility complex, class I-related	AF010450|Mr1|15064|major histocompatibility complex, class I-related	AF010452|Mr1|15064|major histocompatibility complex, class I-related	AF010453|Mr1|15064|major histocompatibility complex, class I-related	U94989|Mr1|15064|major histocompatibility complex, class I-related	AK162712|Mr1|15064|major histocompatibility complex, class I-related	NM_008209|Mr1|15064|major histocompatibility complex, class I-related	BC026137|Mr1|15064|major histocompatibility complex, class I-related	AK042119|Mr1|15064|major histocompatibility complex, class I-related	AK137171|Mr1|15064|major histocompatibility complex, class I-related	AK144040|Mr1|15064|major histocompatibility complex, class I-related	AK041171|Mr1|15064|major histocompatibility complex, class I-related
mm9_v1_chr14_+_26484518_26484659	0.529265	FOX{I1,J2}.p2	AK132106|Gm10397|100038401|predicted gene 10397
mm9_v1_chr14_+_79826199_79826317	0.529037	FOX{I1,J2}.p2	AK135854|Kbtbd7|211255|kelch repeat and BTB (POZ) domain containing 7	BC096019|Kbtbd7|211255|kelch repeat and BTB (POZ) domain containing 7	NM_001024135|Kbtbd7|211255|kelch repeat and BTB (POZ) domain containing 7
mm9_v1_chr13_+_120251565_120251614	0.52847	FOX{I1,J2}.p2	AK008565|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	NM_001113550|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	NM_026127|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK008588|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK149119|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK020163|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK146515|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK014735|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	BC021327|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK017802|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK160863|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK008746|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	BC028328|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK215837|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene
mm9_v1_chr1_-_158330120_158330120	0.527555	FOX{I1,J2}.p2	AK134071|9430070O13Rik|77352|RIKEN cDNA 9430070O13 gene	NM_001198597|9430070O13Rik|77352|RIKEN cDNA 9430070O13 gene
mm9_v1_chr12_+_86311859_86311909	0.527504	FOX{I1,J2}.p2	NM_028632|Fcf1|73736|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)	BC094619|Fcf1|73736|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)	BC033045|Fcf1|73736|FCF1 small subunit (SSU) processome component homolog (S. cerevisiae)
mm9_v1_chr6_-_130181634_130181704	0.527194	FOX{I1,J2}.p2	AF288375|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	EU429321|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	BC099859|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	BC099860|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	BC099862|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	S78689|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF074457|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF283248|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF283249|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF283253|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF307945|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF307946|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U12890|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AF288376|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	AK143240|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	BC140984|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	BC130251|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	NM_014194|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7	U10094|Klra7|16638|killer cell lectin-like receptor, subfamily A, member 7
mm9_v1_chr13_-_101603189_101603199	0.527016	FOX{I1,J2}.p2	AK166006|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5
mm9_v1_chr9_+_75623367_75623480	0.526473	FOX{I1,J2}.p2	BC141283|Bmp5|12160|bone morphogenetic protein 5
mm9_v1_chr9_+_22215956_22216031	0.525918	FOX{I1,J2}.p2	AK220359|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene	AK021129|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene	AK170604|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene	BC054761|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene	NM_026739|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene
mm9_v1_chr9_-_80359017_80359087	0.525477	FOX{I1,J2}.p2	AF229929|Impg1|63859|interphotoreceptor matrix proteoglycan 1	BC022970|Impg1|63859|interphotoreceptor matrix proteoglycan 1	AK020862|Impg1|63859|interphotoreceptor matrix proteoglycan 1	NM_022016|Impg1|63859|interphotoreceptor matrix proteoglycan 1	AF266478|Impg1|63859|interphotoreceptor matrix proteoglycan 1
mm9_v1_chr12_+_120084801_120084801	0.524276	FOX{I1,J2}.p2	AK053093|Sp8|320145|trans-acting transcription factor 8	NM_177082|Sp8|320145|trans-acting transcription factor 8
mm9_v1_chr5_+_150921233_150921280	0.523441	FOX{I1,J2}.p2	AK157981|Fry|320365|furry homolog (Drosophila)
mm9_v1_chr9_+_65062496_65062582	0.523154	FOX{I1,J2}.p2	AK133475|Parp16|214424|poly (ADP-ribose) polymerase family, member 16	NM_177460|Parp16|214424|poly (ADP-ribose) polymerase family, member 16	BC055447|Parp16|214424|poly (ADP-ribose) polymerase family, member 16	AK169866|Parp16|214424|poly (ADP-ribose) polymerase family, member 16
mm9_v1_chr5_+_144670857_144670916	0.522272	FOX{I1,J2}.p2	AK146365|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC139774|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC066110|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	NM_008886|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC058189|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	AK014190|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	AK017847|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	AK034866|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC086637|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC141287|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC022179|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	AK083049|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC083502|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC110684|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)
mm9_v1_chr8_-_23276871_23276906	0.517935	FOX{I1,J2}.p2	AF099066|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3	BC005411|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3	NM_011848|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3
mm9_v1_chr4_-_128483355_128483429	0.517726	FOX{I1,J2}.p2	NM_001081098|Zfp362|230761|zinc finger protein 362
mm9_v1_chr4_+_134481298_134481299	0.517443	FOX{I1,J2}.p2	
mm9_v1_chr16_-_20426357_20426468	0.517418	FOX{I1,J2}.p2	BC042581|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB019003|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC090629|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC061132|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_013790|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_176839|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm9_v1_chr1_+_40496493_40496633	0.516005	FOX{I1,J2}.p2	NM_010743|Il1rl1|17082|interleukin 1 receptor-like 1	AK033417|Il1rl1|17082|interleukin 1 receptor-like 1	AK145118|Il1rl1|17082|interleukin 1 receptor-like 1	Y07519|Il1rl1|17082|interleukin 1 receptor-like 1	M24843|Il1rl1|17082|interleukin 1 receptor-like 1
mm9_v1_chr17_-_22498323_22498380	0.51506	FOX{I1,J2}.p2	BC090966|Zfp944|319615|zinc finger protein 944	AK033651|Zfp944|319615|zinc finger protein 944	AK031839|Zfp944|319615|zinc finger protein 944	AK167780|Zfp944|319615|zinc finger protein 944	NM_176962|Zfp944|319615|zinc finger protein 944	AK048043|Zfp944|319615|zinc finger protein 944
mm9_v1_chr10_-_127188787_127188853	0.514626	FOX{I1,J2}.p2	AK031480|Gpr182|11536|G protein-coupled receptor 182	NM_007412|Gpr182|11536|G protein-coupled receptor 182
mm9_v1_chr3_-_116317504_116317504	0.514146	FOX{I1,J2}.p2	AK039588|Ccdc76|229780|coiled-coil domain containing 76	NM_030016|Ccdc76|229780|coiled-coil domain containing 76
mm9_v1_chr7_+_51079913_51079927	0.514062	FOX{I1,J2}.p2	AK138218|Klk6|19144|kallikrein related-peptidase 6	NM_001164696|Klk6|19144|kallikrein related-peptidase 6	NM_001164697|Klk6|19144|kallikrein related-peptidase 6	NM_001164698|Klk6|19144|kallikrein related-peptidase 6	AB015206|Klk6|19144|kallikrein related-peptidase 6	AB008928|Klk6|19144|kallikrein related-peptidase 6
mm9_v1_chr18_-_78006524_78006535	0.513824	FOX{I1,J2}.p2	AK147599|Haus1|225745|HAUS augmin-like complex, subunit 1
mm9_v1_chr5_-_69983484_69983543	0.512733	FOX{I1,J2}.p2	AK220275|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK171299|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK166601|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	BC004084|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	NM_001038015|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK014950|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK015527|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK017588|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK051596|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK141408|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK168516|Gnpda2|67980|glucosamine-6-phosphate deaminase 2
mm9_v1_chr13_-_93253967_93253985	0.510839	FOX{I1,J2}.p2	AK015100|Fam151b|73942|family with sequence similarity 151, member B	AK162422|Fam151b|73942|family with sequence similarity 151, member B	NM_001163627|Fam151b|73942|family with sequence similarity 151, member B
mm9_v1_chr15_-_31522411_31522489	0.510713	FOX{I1,J2}.p2	AK219685|Cct5|12465|chaperonin containing Tcp1, subunit 5 (epsilon)	AK216446|Cct5|12465|chaperonin containing Tcp1, subunit 5 (epsilon)	AK213471|Cct5|12465|chaperonin containing Tcp1, subunit 5 (epsilon)
mm9_v1_chr11_+_86298106_86298244	0.510433	FOX{I1,J2}.p2	AK036401|Rnft1|76892|ring finger protein, transmembrane 1	NM_029788|Rnft1|76892|ring finger protein, transmembrane 1	AK171077|Rnft1|76892|ring finger protein, transmembrane 1	AK153293|Rnft1|76892|ring finger protein, transmembrane 1	BC050796|Rnft1|76892|ring finger protein, transmembrane 1	AK002624|Rnft1|76892|ring finger protein, transmembrane 1
mm9_v1_chr18_+_70085202_70085238	0.509104	FOX{I1,J2}.p2	AK078964|Ccdc68|381175|coiled-coil domain containing 68	NM_201362|Ccdc68|381175|coiled-coil domain containing 68	BC046343|Ccdc68|381175|coiled-coil domain containing 68
mm9_v1_chr2_+_163051189_163051200	0.509086	FOX{I1,J2}.p2	NM_001098799|Tox2|269389|TOX high mobility group box family member 2
mm9_v1_chr4_+_129190877_129190896	0.508369	FOX{I1,J2}.p2	AK079390|Marcksl1|17357|MARCKS-like 1	AK150261|Marcksl1|17357|MARCKS-like 1	AK152990|Marcksl1|17357|MARCKS-like 1	AK169355|Marcksl1|17357|MARCKS-like 1	X61399|Marcksl1|17357|MARCKS-like 1	BC006757|Marcksl1|17357|MARCKS-like 1
mm9_v1_chr11_-_86807216_86807263	0.506218	FOX{I1,J2}.p2	NM_001005341|Ypel2|77864|yippee-like 2 (Drosophila)
mm9_v1_chr4_+_125724224_125724314	0.505314	FOX{I1,J2}.p2	AK140877|Mrps15|66407|mitochondrial ribosomal protein S15	BC029193|Mrps15|66407|mitochondrial ribosomal protein S15	BC055861|Mrps15|66407|mitochondrial ribosomal protein S15	AB049947|Mrps15|66407|mitochondrial ribosomal protein S15
mm9_v1_chr13_-_21494549_21494625	0.504918	FOX{I1,J2}.p2	BC007473|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3	AK031286|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3	AK031080|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3	AK050028|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3	AK028902|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3	NM_001145778|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3	NM_023685|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3
mm9_v1_chr3_-_88905775_88905882	0.504186	FOX{I1,J2}.p2	AF309508|Fdps|110196|farnesyl diphosphate synthetase	AK168008|Fdps|110196|farnesyl diphosphate synthetase	AK088601|Fdps|110196|farnesyl diphosphate synthetase	AK166026|Fdps|110196|farnesyl diphosphate synthetase	BC087886|Fdps|110196|farnesyl diphosphate synthetase	AK077979|Fdps|110196|farnesyl diphosphate synthetase	AK151742|Fdps|110196|farnesyl diphosphate synthetase	BC048497|Fdps|110196|farnesyl diphosphate synthetase	NM_134469|Fdps|110196|farnesyl diphosphate synthetase	AK140881|Fdps|110196|farnesyl diphosphate synthetase
mm9_v1_chr7_-_148358709_148358768	0.503676	FOX{I1,J2}.p2	AK145173|Rnh1|107702|ribonuclease/angiogenin inhibitor 1	NM_001172100|Rnh1|107702|ribonuclease/angiogenin inhibitor 1
mm9_v1_chr4_+_143689782_143689782	0.501568	FOX{I1,J2}.p2	AK145585|Pramel4|347710|preferentially expressed antigen in melanoma like 4	BC132592|Gm13102|100041077|predicted gene 13102	BC132620|Gm13102|100041077|predicted gene 13102	NM_001085419|Gm13102|100041077|predicted gene 13102
mm9_v1_chr1_+_138311847_138311988	0.500271	FOX{I1,J2}.p2	AK004833|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	NM_026500|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	AK013179|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	AK133731|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	AK076462|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	BC023840|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59
mm9_v1_chr6_-_113327369_113327436	0.499969	FOX{I1,J2}.p2	BC032195|Tada3|101206|transcriptional adaptor 3	AK187590|Tada3|101206|transcriptional adaptor 3
mm9_v1_chr13_+_113999866_114000016	0.498671	FOX{I1,J2}.p2	BC051919|Esm1|71690|endothelial cell-specific molecule 1	NM_023612|Esm1|71690|endothelial cell-specific molecule 1	AK002913|Esm1|71690|endothelial cell-specific molecule 1	BC020038|Esm1|71690|endothelial cell-specific molecule 1	BC147648|Esm1|71690|endothelial cell-specific molecule 1	BC147650|Esm1|71690|endothelial cell-specific molecule 1	AJ249354|Esm1|71690|endothelial cell-specific molecule 1
mm9_v1_chr4_-_60152702_60152728	0.497889	FOX{I1,J2}.p2	BC012221|Mup1|17840|major urinary protein 1	BC013649|Mup1|17840|major urinary protein 1	BC106092|Mup1|17840|major urinary protein 1	BC091775|Mup1|17840|major urinary protein 1	M28649|Mup1|17840|major urinary protein 1	NM_001045550|Mup2|17841|major urinary protein 2	NM_008647|Mup2|17841|major urinary protein 2
mm9_v1_chr9_+_20447739_20447785	0.497613	FOX{I1,J2}.p2	AK051149|Ubl5|66177|ubiquitin-like 5	NM_025401|Ubl5|66177|ubiquitin-like 5	AK040449|Ubl5|66177|ubiquitin-like 5
mm9_v1_chr2_-_60560659_60560699	0.497529	FOX{I1,J2}.p2	AK036439|Itgb6|16420|integrin beta 6	NM_001159564|Itgb6|16420|integrin beta 6	AK085900|Itgb6|16420|integrin beta 6
mm9_v1_chr1_-_141755209_141755302	0.496136	FOX{I1,J2}.p2	AJ565908|BC026782|545366|cDNA sequence BC026782	M29007|BC026782|545366|cDNA sequence BC026782	AK149511|BC026782|545366|cDNA sequence BC026782	NM_001025575|BC026782|545366|cDNA sequence BC026782
mm9_v1_chr1_-_157883515_157883643	0.495936	FOX{I1,J2}.p2	AK149727|Tor1aip1|208263|torsin A interacting protein 1	AB251963|Tor1aip1|208263|torsin A interacting protein 1	NM_001160018|Tor1aip1|208263|torsin A interacting protein 1	NM_144791|Tor1aip1|208263|torsin A interacting protein 1
mm9_v1_chr3_+_87924435_87924571	0.495645	FOX{I1,J2}.p2	BC022774|Iqgap3|404710|IQ motif containing GTPase activating protein 3
mm9_v1_chr6_-_142271469_142271500	0.495585	FOX{I1,J2}.p2	AF240694|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	NM_130861|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5	AK029706|Slco1a5|108096|solute carrier organic anion transporter family, member 1a5
mm9_v1_chr15_+_76181718_76181819	0.495102	FOX{I1,J2}.p2	NM_001164607|Maf1|68877|MAF1 homolog (S. cerevisiae)	NM_001164608|Maf1|68877|MAF1 homolog (S. cerevisiae)	NM_026859|Maf1|68877|MAF1 homolog (S. cerevisiae)	BC016260|Maf1|68877|MAF1 homolog (S. cerevisiae)	AK154047|Maf1|68877|MAF1 homolog (S. cerevisiae)	AK042913|Maf1|68877|MAF1 homolog (S. cerevisiae)
mm9_v1_chr17_+_12777054_12777126	0.494988	FOX{I1,J2}.p2	AJ006036|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	NM_013667|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	AK143892|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	AK052658|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	BC069911|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2	BC015250|Slc22a2|20518|solute carrier family 22 (organic cation transporter), member 2
mm9_v1_chr4_+_129190872_129190875	0.494582	FOX{I1,J2}.p2	AK083913|Marcksl1|17357|MARCKS-like 1
mm9_v1_chr14_-_78488780_78488813	0.4945	FOX{I1,J2}.p2	BC120488|AU021034|219170|expressed sequence AU021034	BC120490|AU021034|219170|expressed sequence AU021034	AK047611|AU021034|219170|expressed sequence AU021034	AK034132|AU021034|219170|expressed sequence AU021034	NM_177629|AU021034|219170|expressed sequence AU021034
mm9_v1_chr7_+_24866915_24866972	0.494256	FOX{I1,J2}.p2	AK144892|Zfp180|210135|zinc finger protein 180	AK083802|Zfp180|210135|zinc finger protein 180	BC085472|Zfp180|210135|zinc finger protein 180	AK145004|Zfp180|210135|zinc finger protein 180	BC066115|Zfp180|210135|zinc finger protein 180	AK141922|Zfp180|210135|zinc finger protein 180	NM_001045486|Zfp180|210135|zinc finger protein 180	AK154182|Zfp180|210135|zinc finger protein 180	BC063741|Zfp180|210135|zinc finger protein 180
mm9_v1_chr10_-_80630518_80630667	0.493969	FOX{I1,J2}.p2	AK145367|Pias4|59004|protein inhibitor of activated STAT 4	AF109174|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr13_+_91881065_91881204	0.492161	FOX{I1,J2}.p2	AK034622|Acot12|74156|acyl-CoA thioesterase 12	AK004905|Acot12|74156|acyl-CoA thioesterase 12	AK033663|Acot12|74156|acyl-CoA thioesterase 12	NM_028790|Acot12|74156|acyl-CoA thioesterase 12	AB078618|Acot12|74156|acyl-CoA thioesterase 12	BC025852|Acot12|74156|acyl-CoA thioesterase 12
mm9_v1_chr7_-_4397194_4397258	0.49193	FOX{I1,J2}.p2	AK089458|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	AK034180|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	BC082583|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	AK028434|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	NM_175372|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)
mm9_v1_chrX_+_75110096_75110096	0.490413	FOX{I1,J2}.p2	NM_001085544|Gm14744|628923|predicted gene 14744
mm9_v1_chr14_-_21208006_21208158	0.490311	FOX{I1,J2}.p2	AK162075|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	BC023787|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	BC027012|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	AK075979|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	AK153033|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	BC014686|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	AK043725|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	AK077324|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9	NM_134081|Dnajc9|108671|DnaJ (Hsp40) homolog, subfamily C, member 9
mm9_v1_chr7_+_63305516_63305584	0.490176	FOX{I1,J2}.p2	NM_010418|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm9_v1_chr4_-_141154138_141154141	0.489878	FOX{I1,J2}.p2	AK010660|Fblim1|74202|filamin binding LIM protein 1
mm9_v1_chr1_-_121891786_121891786	0.489125	FOX{I1,J2}.p2	EF632061|Gm101|226356|predicted gene 101	NM_001115074|Gm101|226356|predicted gene 101
mm9_v1_chr6_-_18059054_18059060	0.48911	FOX{I1,J2}.p2	AF459789|Asz1|74068|ankyrin repeat, SAM and basic leucine zipper domain containing 1	AK016595|Asz1|74068|ankyrin repeat, SAM and basic leucine zipper domain containing 1	BC058859|Asz1|74068|ankyrin repeat, SAM and basic leucine zipper domain containing 1	NM_023729|Asz1|74068|ankyrin repeat, SAM and basic leucine zipper domain containing 1
mm9_v1_chr19_+_55816320_55816547	0.488122	FOX{I1,J2}.p2	AK132465|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	AK035059|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	AF107298|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box
mm9_v1_chr9_-_72257565_72257749	0.487827	FOX{I1,J2}.p2	BC065403|BC065403|77936|cDNA sequence BC065403	AK020810|BC065403|77936|cDNA sequence BC065403
mm9_v1_chr6_-_146902928_146902942	0.486793	FOX{I1,J2}.p2	AK029686|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	AK006598|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	BC052362|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	AK076643|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	NM_001164236|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene	NM_028509|1700034J05Rik|73344|RIKEN cDNA 1700034J05 gene
mm9_v1_chr6_-_82889694_82889743	0.486169	FOX{I1,J2}.p2	AB021291|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC057048|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC090625|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK047067|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC094567|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK035993|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK143196|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	NM_001113481|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	NM_011350|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
mm9_v1_chr11_+_80022584_80022586	0.48613	FOX{I1,J2}.p2	AK032096|Rhot1|59040|ras homolog gene family, member T1	AK054472|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr9_-_118059168_118059218	0.485574	FOX{I1,J2}.p2	BC056653|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)	AK020626|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)	NM_026442|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)	AK002667|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)	AK011760|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)
mm9_v1_chr8_+_74134884_74135109	0.485427	FOX{I1,J2}.p2	BC032165|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK036165|Glt25d1|234407|glycosyltransferase 25 domain containing 1	NM_146211|Glt25d1|234407|glycosyltransferase 25 domain containing 1	BC056951|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK035788|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK076103|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK029433|Glt25d1|234407|glycosyltransferase 25 domain containing 1	AK154775|Glt25d1|234407|glycosyltransferase 25 domain containing 1
mm9_v1_chr13_+_104969177_104969177	0.485403	FOX{I1,J2}.p2	AK030862|Trim23|81003|tripartite motif-containing 23	NM_030731|Trim23|81003|tripartite motif-containing 23
mm9_v1_chr7_-_14840218_14840218	0.484971	FOX{I1,J2}.p2	BC147210|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6	BC172008|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6	NM_001081325|Sult2a6|629219|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 6
mm9_v1_chr7_+_52877180_52877296	0.483857	FOX{I1,J2}.p2	AB195681|Izumo1|73456|izumo sperm-egg fusion 1	AK006830|Izumo1|73456|izumo sperm-egg fusion 1	NM_001018013|Izumo1|73456|izumo sperm-egg fusion 1	BC139270|Izumo1|73456|izumo sperm-egg fusion 1
mm9_v1_chr1_-_132611151_132611152	0.483386	FOX{I1,J2}.p2	EU334169|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616666|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616667|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616668|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616669|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	EU616670|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2	NM_001162416|Pfkfb2|18640|6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
mm9_v1_chr12_-_86691817_86691869	0.482876	FOX{I1,J2}.p2	AK191153|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK198152|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK201939|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK206502|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK207697|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	AK216393|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)	BC006774|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr11_-_4494815_4494822	0.48215	FOX{I1,J2}.p2	NM_028860|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr15_+_101278175_101278219	0.481438	FOX{I1,J2}.p2	NM_025487|1700011A15Rik|66322|RIKEN cDNA 1700011A15 gene	BC048463|1700011A15Rik|66322|RIKEN cDNA 1700011A15 gene	AK007046|1700011A15Rik|66322|RIKEN cDNA 1700011A15 gene	AK005855|1700011A15Rik|66322|RIKEN cDNA 1700011A15 gene
mm9_v1_chr11_+_62388079_62388082	0.481278	FOX{I1,J2}.p2	AK089004|Trpv2|22368|transient receptor potential cation channel, subfamily V, member 2	AK089502|Trpv2|22368|transient receptor potential cation channel, subfamily V, member 2
mm9_v1_chr7_+_25562222_25562279	0.481272	FOX{I1,J2}.p2	NM_007675|Ceacam10|26366|carcinoembryonic antigen-related cell adhesion molecule 10	BC003346|Ceacam10|26366|carcinoembryonic antigen-related cell adhesion molecule 10	AK018529|Ceacam10|26366|carcinoembryonic antigen-related cell adhesion molecule 10	L38422|Ceacam10|26366|carcinoembryonic antigen-related cell adhesion molecule 10
mm9_v1_chr6_-_129863199_129863241	0.48054	FOX{I1,J2}.p2	BC120550|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	BC137708|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	AF247643|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	NM_008463|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5	U10091|Klra5|16636|killer cell lectin-like receptor, subfamily A, member 5
mm9_v1_chr4_+_125724217_125724220	0.47945	FOX{I1,J2}.p2	AK005131|Mrps15|66407|mitochondrial ribosomal protein S15	AK008623|Mrps15|66407|mitochondrial ribosomal protein S15
mm9_v1_chr2_+_181054406_181054528	0.479293	FOX{I1,J2}.p2	NM_001001882|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166665|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166666|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166667|Rtel1|269400|regulator of telomere elongation helicase 1	NM_001166668|Rtel1|269400|regulator of telomere elongation helicase 1	AK142225|Rtel1|269400|regulator of telomere elongation helicase 1	BC057352|Rtel1|269400|regulator of telomere elongation helicase 1	AK145145|Rtel1|269400|regulator of telomere elongation helicase 1	AK173097|Rtel1|269400|regulator of telomere elongation helicase 1	AY481619|Rtel1|269400|regulator of telomere elongation helicase 1	AY481620|Rtel1|269400|regulator of telomere elongation helicase 1	AY481621|Rtel1|269400|regulator of telomere elongation helicase 1	AY481622|Rtel1|269400|regulator of telomere elongation helicase 1	AY481623|Rtel1|269400|regulator of telomere elongation helicase 1	BC105578|Rtel1|269400|regulator of telomere elongation helicase 1
mm9_v1_chr10_+_80586394_80586698	0.479284	FOX{I1,J2}.p2	AK140101|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK192399|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK202988|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK212487|Map2k2|26396|mitogen-activated protein kinase kinase 2	AK216389|Map2k2|26396|mitogen-activated protein kinase kinase 2
mm9_v1_chr2_-_155418441_155418518	0.477886	FOX{I1,J2}.p2	NM_008180|Gss|14854|glutathione synthetase	U35456|Gss|14854|glutathione synthetase	BC003784|Gss|14854|glutathione synthetase	AK146486|Gss|14854|glutathione synthetase	AK149577|Gss|14854|glutathione synthetase	AK169096|Gss|14854|glutathione synthetase	AK169276|Gss|14854|glutathione synthetase	AK159630|Gss|14854|glutathione synthetase
mm9_v1_chr12_-_89420210_89420337	0.47779	FOX{I1,J2}.p2	BC094894|Gm10436|100039315|predicted gene 10436	AK139576|Gm10436|100039315|predicted gene 10436	NM_001105254|Gm10436|100039315|predicted gene 10436
mm9_v1_chr3_+_93246251_93246251	0.476316	FOX{I1,J2}.p2	NM_001163098|Tchh|99681|trichohyalin
mm9_v1_chr14_-_55400722_55400814	0.47545	FOX{I1,J2}.p2	BC059004|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8	NM_016972|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8	AK044620|Slc7a8|50934|solute carrier family 7 (cationic amino acid transporter, y+ system), member 8
mm9_v1_chr4_+_40419212_40419212	0.475163	FOX{I1,J2}.p2	AK044217|Tmem215|320500|transmembrane protein 215	AK044627|Tmem215|320500|transmembrane protein 215	NM_177175|Tmem215|320500|transmembrane protein 215
mm9_v1_chr3_-_153388047_153388152	0.474862	FOX{I1,J2}.p2	BC131987|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC132317|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC058387|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK034804|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_011372|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	Y11342|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
mm9_v1_chr8_-_26059258_26059275	0.473886	FOX{I1,J2}.p2	AF513715|Adam32|353188|a disintegrin and metallopeptidase domain 32	AK005759|Adam32|353188|a disintegrin and metallopeptidase domain 32	BC060983|Adam32|353188|a disintegrin and metallopeptidase domain 32	AK131749|Adam32|353188|a disintegrin and metallopeptidase domain 32	NM_153397|Adam32|353188|a disintegrin and metallopeptidase domain 32
mm9_v1_chr1_-_186635045_186635085	0.473069	FOX{I1,J2}.p2	AK011722|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1	AK004989|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1
mm9_v1_chr2_-_35252576_35252694	0.47299	FOX{I1,J2}.p2	BC115676|4930402F06Rik|74854|RIKEN cDNA 4930402F06 gene	BC115677|4930402F06Rik|74854|RIKEN cDNA 4930402F06 gene	AK015047|4930402F06Rik|74854|RIKEN cDNA 4930402F06 gene	NM_001080709|4930402F06Rik|74854|RIKEN cDNA 4930402F06 gene
mm9_v1_chr2_+_154839149_154839305	0.471689	FOX{I1,J2}.p2	S70326|a|50518|nonagouti	L06451|a|50518|nonagouti	S70394|a|50518|nonagouti	L06941|a|50518|nonagouti	NM_015770|a|50518|nonagouti
mm9_v1_chr2_+_71049762_71049900	0.470891	FOX{I1,J2}.p2	NM_001198872|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198873|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198874|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198875|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198876|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK019441|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK141837|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK150173|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK164322|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK164437|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992208|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992209|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992210|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2
mm9_v1_chr17_+_35390491_35390518	0.470746	FOX{I1,J2}.p2	AK196028|Ddx39b|53817|DEAD (Asp-Glu-Ala-Asp) box polypeptide 39B
mm9_v1_chr18_+_56722222_56722222	0.470196	FOX{I1,J2}.p2	AK016958|Phax|56698|phosphorylated adaptor for RNA export	NM_001162989|Phax|56698|phosphorylated adaptor for RNA export
mm9_v1_chr4_-_132848450_132848516	0.469807	FOX{I1,J2}.p2	
mm9_v1_chr9_-_118059257_118059259	0.468203	FOX{I1,J2}.p2	AK168728|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)
mm9_v1_chr17_+_46783180_46783244	0.467505	FOX{I1,J2}.p2	NM_025302|Mrpl2|27398|mitochondrial ribosomal protein L2	AK007672|Mrpl2|27398|mitochondrial ribosomal protein L2	AK009521|Mrpl2|27398|mitochondrial ribosomal protein L2	BC027762|Mrpl2|27398|mitochondrial ribosomal protein L2
mm9_v1_chr8_-_44784840_44784846	0.4675	FOX{I1,J2}.p2	BC132102|Adam34|252866|a disintegrin and metallopeptidase domain 34	BC132292|Adam34|252866|a disintegrin and metallopeptidase domain 34	BC141203|Adam34|252866|a disintegrin and metallopeptidase domain 34	BC141204|Adam34|252866|a disintegrin and metallopeptidase domain 34	NM_001079931|Gm5347|384814|predicted gene 5347	AK029590|Adam34|252866|a disintegrin and metallopeptidase domain 34
mm9_v1_chr11_+_20125239_20125296	0.467436	FOX{I1,J2}.p2	AK078671|Rab1|19324|RAB1, member RAS oncogene family
mm9_v1_chr2_+_148660882_148660885	0.466641	FOX{I1,J2}.p2	NM_009979|Cst9|13013|cystatin 9	Y18243|Cst9|13013|cystatin 9
mm9_v1_chr2_-_38569891_38570061	0.466579	FOX{I1,J2}.p2	AF511594|Nr5a1|26423|nuclear receptor subfamily 5, group A, member 1	BC110476|Nr5a1|26423|nuclear receptor subfamily 5, group A, member 1	BC110477|Nr5a1|26423|nuclear receptor subfamily 5, group A, member 1	AK144376|Nr5a1|26423|nuclear receptor subfamily 5, group A, member 1	AK156911|Nr5a1|26423|nuclear receptor subfamily 5, group A, member 1	AK134378|Nr5a1|26423|nuclear receptor subfamily 5, group A, member 1	NM_139051|Nr5a1|26423|nuclear receptor subfamily 5, group A, member 1
mm9_v1_chr1_-_58752798_58752832	0.466019	FOX{I1,J2}.p2	AK077190|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	AK016678|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	AK133373|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)	NM_175370|Als2cr12|108812|amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12 (human)
mm9_v1_chr11_+_101848369_101848394	0.46527	FOX{I1,J2}.p2	AK005669|1700006E09Rik|75437|RIKEN cDNA 1700006E09 gene	NM_029287|1700006E09Rik|75437|RIKEN cDNA 1700006E09 gene	BC116819|1700006E09Rik|75437|RIKEN cDNA 1700006E09 gene	BC116821|1700006E09Rik|75437|RIKEN cDNA 1700006E09 gene	BC100517|1700006E09Rik|75437|RIKEN cDNA 1700006E09 gene
mm9_v1_chr2_-_150835067_150835133	0.465198	FOX{I1,J2}.p2	AK129253|Ninl|78177|ninein-like	BC067071|Ninl|78177|ninein-like	NM_207204|Ninl|78177|ninein-like
mm9_v1_chr6_+_133242233_133242233	0.46428	FOX{I1,J2}.p2	AK017421|5530400C23Rik|232426|RIKEN cDNA 5530400C23 gene	NM_027784|5530400C23Rik|232426|RIKEN cDNA 5530400C23 gene
mm9_v1_chr14_+_57506630_57506655	0.463705	FOX{I1,J2}.p2	NM_029498|Zmym2|76007|zinc finger, MYM-type 2	BC141403|Zmym2|76007|zinc finger, MYM-type 2
mm9_v1_chr5_+_130732904_130732998	0.46313	FOX{I1,J2}.p2	AK162899|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)	NM_001015876|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)	AK082884|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)	BC068126|Tyw1|100929|tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
mm9_v1_chr5_+_53174293_53174344	0.462951	FOX{I1,J2}.p2	AK138997|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK049511|Zcchc4|78796|zinc finger, CCHC domain containing 4	NM_030185|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK019621|Zcchc4|78796|zinc finger, CCHC domain containing 4	AK143805|Zcchc4|78796|zinc finger, CCHC domain containing 4
mm9_v1_chr11_-_32724516_32724593	0.462457	FOX{I1,J2}.p2	EU477371|1700008A04Rik|69351|RIKEN cDNA 1700008A04 gene	AK005748|1700008A04Rik|69351|RIKEN cDNA 1700008A04 gene	NM_027050|1700008A04Rik|69351|RIKEN cDNA 1700008A04 gene
mm9_v1_chr13_+_73674194_73674271	0.461385	FOX{I1,J2}.p2	BC054119|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	NM_010020|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AK032629|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AK136885|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	U16265|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AF109072|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3
mm9_v1_chrX_-_7753254_7753306	0.461221	FOX{I1,J2}.p2	BC113777|Tbc1d25|209815|TBC1 domain family, member 25	BC128565|Tbc1d25|209815|TBC1 domain family, member 25	BC128566|Tbc1d25|209815|TBC1 domain family, member 25	AK078145|Tbc1d25|209815|TBC1 domain family, member 25	NM_001166437|Tbc1d25|209815|TBC1 domain family, member 25	NM_172478|Tbc1d25|209815|TBC1 domain family, member 25
mm9_v1_chr4_+_143649028_143649028	0.461042	FOX{I1,J2}.p2	AK145585|Pramel4|347710|preferentially expressed antigen in melanoma like 4	AK163305|Pramel4|347710|preferentially expressed antigen in melanoma like 4	NM_001001319|Pramel4|347710|preferentially expressed antigen in melanoma like 4
mm9_v1_chr7_-_109248742_109248742	0.459932	FOX{I1,J2}.p2	AK132854|Art5|11875|ADP-ribosyltransferase 5	NM_007491|Art5|11875|ADP-ribosyltransferase 5
mm9_v1_chr2_-_168427037_168427156	0.458565	FOX{I1,J2}.p2	EU887581|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887587|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887593|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887599|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK083119|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887583|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887585|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887589|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887591|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887595|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887597|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887601|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	EU887603|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	NM_001037178|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2	AK044489|Nfatc2|18019|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2
mm9_v1_chr2_-_26526800_26526801	0.457132	FOX{I1,J2}.p2	BC114544|Lcn4|16821|lipocalin 4	D38581|Lcn4|16821|lipocalin 4	NM_010695|Lcn4|16821|lipocalin 4
mm9_v1_chr1_+_134088010_134088033	0.455533	FOX{I1,J2}.p2	AK144269|Lemd1|213409|LEM domain containing 1	NM_001033250|Lemd1|213409|LEM domain containing 1	BC115462|Lemd1|213409|LEM domain containing 1	BC115463|Lemd1|213409|LEM domain containing 1	BC066109|Lemd1|213409|LEM domain containing 1
mm9_v1_chr7_-_29678773_29678890	0.454506	FOX{I1,J2}.p2	AK195007|Actn4|60595|actinin alpha 4
mm9_v1_chr6_-_39156609_39156661	0.454129	FOX{I1,J2}.p2	AK136209|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	BC145216|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)	BC145848|Jhdm1d|338523|jumonji C domain-containing histone demethylase 1 homolog D (S. cerevisiae)
mm9_v1_chr2_+_124436328_124436346	0.453912	FOX{I1,J2}.p2	AK084922|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	AK031307|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chr7_+_18398030_18398100	0.453645	FOX{I1,J2}.p2	AK005390|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005482|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005509|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005533|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	NM_025957|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	BC099412|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14
mm9_v1_chr18_-_9282615_9282806	0.453358	FOX{I1,J2}.p2	AJ414562|Gjd4|225152|gap junction protein, delta 4	AK053016|Gjd4|225152|gap junction protein, delta 4	BC137984|Gjd4|225152|gap junction protein, delta 4	AK034663|Gjd4|225152|gap junction protein, delta 4	NM_153086|Gjd4|225152|gap junction protein, delta 4
mm9_v1_chr16_-_26526854_26526915	0.451742	FOX{I1,J2}.p2	AK142524|Tmem207|100043057|transmembrane protein 207	NM_001101640|Tmem207|100043057|transmembrane protein 207
mm9_v1_chr5_-_116474254_116474473	0.450851	FOX{I1,J2}.p2	AK088250|Prkab1|19079|protein kinase, AMP-activated, beta 1 non-catalytic subunit	BC016398|Prkab1|19079|protein kinase, AMP-activated, beta 1 non-catalytic subunit	NM_031869|Prkab1|19079|protein kinase, AMP-activated, beta 1 non-catalytic subunit	AK153552|Prkab1|19079|protein kinase, AMP-activated, beta 1 non-catalytic subunit
mm9_v1_chr4_-_131628011_131628011	0.450659	FOX{I1,J2}.p2	L00919|Epb4.1|269587|erythrocyte protein band 4.1	NM_183428|Epb4.1|269587|erythrocyte protein band 4.1
mm9_v1_chr7_-_30017388_30017620	0.450061	FOX{I1,J2}.p2	AK163847|Kcnk6|52150|potassium inwardly-rectifying channel, subfamily K, member 6	AK036882|Kcnk6|52150|potassium inwardly-rectifying channel, subfamily K, member 6	DQ185135|Kcnk6|52150|potassium inwardly-rectifying channel, subfamily K, member 6	AK171038|Kcnk6|52150|potassium inwardly-rectifying channel, subfamily K, member 6	AK132480|Kcnk6|52150|potassium inwardly-rectifying channel, subfamily K, member 6	NM_001033525|Kcnk6|52150|potassium inwardly-rectifying channel, subfamily K, member 6
mm9_v1_chr11_+_31900378_31900504	0.450027	FOX{I1,J2}.p2	AK088499|Nsg2|18197|neuron specific gene family member 2	NM_008741|Nsg2|18197|neuron specific gene family member 2	U17259|Nsg2|18197|neuron specific gene family member 2	AK049679|Nsg2|18197|neuron specific gene family member 2	AK075612|Nsg2|18197|neuron specific gene family member 2	AK160712|Nsg2|18197|neuron specific gene family member 2	BC018224|Nsg2|18197|neuron specific gene family member 2	AK041338|Nsg2|18197|neuron specific gene family member 2
mm9_v1_chr1_+_5578546_5578692	0.448843	FOX{I1,J2}.p2	AK039151|Oprk1|18387|opioid receptor, kappa 1	L11065|Oprk1|18387|opioid receptor, kappa 1	NM_011011|Oprk1|18387|opioid receptor, kappa 1	BC116795|Oprk1|18387|opioid receptor, kappa 1	BC119026|Oprk1|18387|opioid receptor, kappa 1	BC144731|Oprk1|18387|opioid receptor, kappa 1	S81111|Oprk1|18387|opioid receptor, kappa 1
mm9_v1_chr8_+_23337748_23337837	0.448816	FOX{I1,J2}.p2	BC029898|Thsd1|56229|thrombospondin, type I, domain 1	AK049636|Thsd1|56229|thrombospondin, type I, domain 1	BC051957|Thsd1|56229|thrombospondin, type I, domain 1	AK052555|Thsd1|56229|thrombospondin, type I, domain 1
mm9_v1_chr10_+_67442317_67442462	0.44843	FOX{I1,J2}.p2	AK052662|Rtkn2|170799|rhotekin 2	NM_001081346|Rtkn2|170799|rhotekin 2	BC158093|Rtkn2|170799|rhotekin 2	BC116341|Rtkn2|170799|rhotekin 2	BC116342|Rtkn2|170799|rhotekin 2	AK045134|Rtkn2|170799|rhotekin 2	AK030986|Rtkn2|170799|rhotekin 2
mm9_v1_chrX_-_7651846_7651885	0.447747	FOX{I1,J2}.p2	AK139757|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	AK169592|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)	NM_011514|Suv39h1|20937|suppressor of variegation 3-9 homolog 1 (Drosophila)
mm9_v1_chr6_+_146754051_146754051	0.447385	FOX{I1,J2}.p2	AY005163|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	AY014836|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	BC108965|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	BC108966|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	DQ322241|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	DQ355143|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2	NM_172309|Arntl2|272322|aryl hydrocarbon receptor nuclear translocator-like 2
mm9_v1_chr2_+_35991917_35991917	0.446493	FOX{I1,J2}.p2	NM_026422|Mrrf|67871|mitochondrial ribosome recycling factor
mm9_v1_chr2_+_148660891_148660907	0.445002	FOX{I1,J2}.p2	AK006429|Cst9|13013|cystatin 9	BC048486|Cst9|13013|cystatin 9	AB017157|Cst9|13013|cystatin 9
mm9_v1_chr4_+_44045506_44045645	0.444215	FOX{I1,J2}.p2	
mm9_v1_chr5_+_32761533_32761558	0.444018	FOX{I1,J2}.p2	AK147112|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK157914|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr6_+_77192839_77192971	0.44356	FOX{I1,J2}.p2	BC027803|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr12_-_82695944_82695966	0.44332	FOX{I1,J2}.p2	BC013096|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	NM_027213|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK171784|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr17_-_79384763_79384778	0.442802	FOX{I1,J2}.p2	AK050059|Prkd3|75292|protein kinase D3
mm9_v1_chr9_+_46081146_46081375	0.441089	FOX{I1,J2}.p2	NM_011752|Zfp259|22687|zinc finger protein 259	AK158995|Zfp259|22687|zinc finger protein 259	AK170372|Zfp259|22687|zinc finger protein 259	AK044472|Zfp259|22687|zinc finger protein 259	AB041612|Zfp259|22687|zinc finger protein 259	BC021397|Zfp259|22687|zinc finger protein 259	AK167849|Zfp259|22687|zinc finger protein 259	AK168061|Zfp259|22687|zinc finger protein 259	AK215085|Zfp259|22687|zinc finger protein 259
mm9_v1_chr14_-_96918064_96918252	0.440265	FOX{I1,J2}.p2	AK031932|Klhl1|93688|kelch-like 1 (Drosophila)	AF252281|Klhl1|93688|kelch-like 1 (Drosophila)	BC094584|Klhl1|93688|kelch-like 1 (Drosophila)	NM_053105|Klhl1|93688|kelch-like 1 (Drosophila)
mm9_v1_chr2_+_150043834_150043834	0.439025	FOX{I1,J2}.p2	AB470966|Zfp937|245174|zinc finger protein 937	NM_001142411|Zfp937|245174|zinc finger protein 937
mm9_v1_chr8_+_74135114_74135308	0.438762	FOX{I1,J2}.p2	BC018287|Glt25d1|234407|glycosyltransferase 25 domain containing 1
mm9_v1_chr13_-_91881231_91881476	0.438558	FOX{I1,J2}.p2	AK135005|4833422C13Rik|373852|RIKEN cDNA 4833422C13 gene	AK162854|4833422C13Rik|373852|RIKEN cDNA 4833422C13 gene	AK161222|4833422C13Rik|373852|RIKEN cDNA 4833422C13 gene	AK162063|4833422C13Rik|373852|RIKEN cDNA 4833422C13 gene	AK048302|4833422C13Rik|373852|RIKEN cDNA 4833422C13 gene
mm9_v1_chr10_+_116018336_116018351	0.438253	FOX{I1,J2}.p2	AK077360|5330438D12Rik|327824|RIKEN cDNA 5330438D12 gene
mm9_v1_chr17_-_33961403_33961506	0.43762	FOX{I1,J2}.p2	U11248|Rps28|54127|ribosomal protein S28	BC010987|Rps28|54127|ribosomal protein S28	AK002919|Rps28|54127|ribosomal protein S28	BC090982|Rps28|54127|ribosomal protein S28	NM_016844|Rps28|54127|ribosomal protein S28	BC125644|Rps28|54127|ribosomal protein S28	BC125646|Rps28|54127|ribosomal protein S28
mm9_v1_chr4_+_114761312_114761366	0.437552	FOX{I1,J2}.p2	NM_001164557|Pdzk1ip1|67182|PDZK1 interacting protein 1	NM_001164558|Pdzk1ip1|67182|PDZK1 interacting protein 1	NM_026018|Pdzk1ip1|67182|PDZK1 interacting protein 1	AK007936|Pdzk1ip1|67182|PDZK1 interacting protein 1	AK008253|Pdzk1ip1|67182|PDZK1 interacting protein 1	AK012305|Pdzk1ip1|67182|PDZK1 interacting protein 1
mm9_v1_chr19_-_5799376_5799434	0.436635	FOX{I1,J2}.p2	AK020483|Malat1|72289|metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)
mm9_v1_chr19_+_30307417_30307431	0.435971	FOX{I1,J2}.p2	AK149484|Mbl2|17195|mannose-binding lectin (protein C) 2	S42294|Mbl2|17195|mannose-binding lectin (protein C) 2	BC010760|Mbl2|17195|mannose-binding lectin (protein C) 2
mm9_v1_chr10_+_92951512_92951516	0.435851	FOX{I1,J2}.p2	AK014518|Hal|15109|histidine ammonia lyase	NM_010401|Hal|15109|histidine ammonia lyase	BC157999|Hal|15109|histidine ammonia lyase
mm9_v1_chr4_+_34841027_34841057	0.435271	FOX{I1,J2}.p2	NM_009889|Cga|12640|glycoprotein hormones, alpha subunit	BC087926|Cga|12640|glycoprotein hormones, alpha subunit	J00643|Cga|12640|glycoprotein hormones, alpha subunit
mm9_v1_chr8_+_108692750_108692777	0.434366	FOX{I1,J2}.p2	AK165979|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK165629|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK053899|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK030762|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK046548|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK049478|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK164666|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	NM_178798|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK157379|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
mm9_v1_chr19_+_37450854_37450917	0.434028	FOX{I1,J2}.p2	AK147754|Kif11|16551|kinesin family member 11	BC060670|Kif11|16551|kinesin family member 11	NM_010615|Kif11|16551|kinesin family member 11	AK083324|Kif11|16551|kinesin family member 11
mm9_v1_chr17_-_74299469_74299535	0.433523	FOX{I1,J2}.p2	X62932|Xdh|22436|xanthine dehydrogenase	AK164764|Xdh|22436|xanthine dehydrogenase	AK034256|Xdh|22436|xanthine dehydrogenase	AK143412|Xdh|22436|xanthine dehydrogenase	AK161529|Xdh|22436|xanthine dehydrogenase	AK144700|Xdh|22436|xanthine dehydrogenase	BC141183|Xdh|22436|xanthine dehydrogenase	NM_011723|Xdh|22436|xanthine dehydrogenase	AK160010|Xdh|22436|xanthine dehydrogenase
mm9_v1_chr13_-_27605067_27605083	0.432914	FOX{I1,J2}.p2	AF230921|Prl8a8|74188|prolactin family 8, subfamily a, member 81	AF230922|Prl8a8|74188|prolactin family 8, subfamily a, member 81	AF230923|Prl8a8|74188|prolactin family 8, subfamily a, member 81	BC100326|Prl8a8|74188|prolactin family 8, subfamily a, member 81	AF466150|Prl8a8|74188|prolactin family 8, subfamily a, member 81	NM_023741|Prl8a8|74188|prolactin family 8, subfamily a, member 81	AK167369|Prl8a8|74188|prolactin family 8, subfamily a, member 81	AK005568|Prl8a8|74188|prolactin family 8, subfamily a, member 81
mm9_v1_chr13_-_4522566_4522580	0.432379	FOX{I1,J2}.p2	AB097220|Akr1c20|116852|aldo-keto reductase family 1, member C20	BC021607|Akr1c20|116852|aldo-keto reductase family 1, member C20	AK012162|Akr1c20|116852|aldo-keto reductase family 1, member C20	NM_054080|Akr1c20|116852|aldo-keto reductase family 1, member C20
mm9_v1_chr4_-_141402189_141402273	0.432319	FOX{I1,J2}.p2	AK007772|Ctrc|76701|chymotrypsin C (caldecrin)	BC103715|Ctrc|76701|chymotrypsin C (caldecrin)	BC115516|Ctrc|76701|chymotrypsin C (caldecrin)	BC115517|Ctrc|76701|chymotrypsin C (caldecrin)	NM_001033875|Ctrc|76701|chymotrypsin C (caldecrin)
mm9_v1_chr5_-_114578184_114578256	0.431105	FOX{I1,J2}.p2	BC062188|Alkbh2|231642|alkB, alkylation repair homolog 2 (E. coli)	NM_175016|Alkbh2|231642|alkB, alkylation repair homolog 2 (E. coli)	AK079195|Alkbh2|231642|alkB, alkylation repair homolog 2 (E. coli)
mm9_v1_chr2_+_120802698_120802797	0.431063	FOX{I1,J2}.p2	AK161890|Tmem62|96957|transmembrane protein 62	BC070410|Tmem62|96957|transmembrane protein 62	NM_175285|Tmem62|96957|transmembrane protein 62
mm9_v1_chr19_+_30307446_30307456	0.429937	FOX{I1,J2}.p2	D11440|Mbl2|17195|mannose-binding lectin (protein C) 2	NM_010776|Mbl2|17195|mannose-binding lectin (protein C) 2
mm9_v1_chr6_-_115788429_115788481	0.429857	FOX{I1,J2}.p2	BC060267|BC060267|212516|cDNA sequence BC060267	NM_001110506|BC060267|212516|cDNA sequence BC060267
mm9_v1_chr4_+_153516477_153516537	0.428515	FOX{I1,J2}.p2	NM_021499|Wdr8|59002|WD repeat domain 8	AK156969|Wdr8|59002|WD repeat domain 8	AK172690|Wdr8|59002|WD repeat domain 8	AB034911|Wdr8|59002|WD repeat domain 8	AK160331|Wdr8|59002|WD repeat domain 8	AK011773|Wdr8|59002|WD repeat domain 8	BC016120|Wdr8|59002|WD repeat domain 8	AK051688|Wdr8|59002|WD repeat domain 8
mm9_v1_chr7_-_14574936_14574936	0.428067	FOX{I1,J2}.p2	NM_001101534|Sult2a4|434121|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 4
mm9_v1_chr5_-_87174825_87174839	0.427909	FOX{I1,J2}.p2	BC115432|Tmprss11e|243084|transmembrane protease, serine 11e	BC115433|Tmprss11e|243084|transmembrane protease, serine 11e	AK162701|Tmprss11e|243084|transmembrane protease, serine 11e	AK037235|Tmprss11e|243084|transmembrane protease, serine 11e	NM_172880|Tmprss11e|243084|transmembrane protease, serine 11e	AY787860|Tmprss11e|243084|transmembrane protease, serine 11e
mm9_v1_chr2_-_60122355_60122474	0.427705	FOX{I1,J2}.p2	AK004267|Cd302|66205|CD302 antigen	NM_025422|Cd302|66205|CD302 antigen
mm9_v1_chr15_-_71864639_71864656	0.42692	FOX{I1,J2}.p2	NM_027174|Col22a1|69700|collagen, type XXII, alpha 1
mm9_v1_chr11_+_3558702_3558702	0.426439	FOX{I1,J2}.p2	BC059243|Morc2a|74522|microrchidia 2A	NM_198162|Morc2a|74522|microrchidia 2A
mm9_v1_chr10_+_67498616_67498743	0.426098	FOX{I1,J2}.p2	AK087079|Rtkn2|170799|rhotekin 2
mm9_v1_chr10_+_92951804_92951841	0.425125	FOX{I1,J2}.p2	AK028963|Hal|15109|histidine ammonia lyase	AK081409|Hal|15109|histidine ammonia lyase	BC057637|Hal|15109|histidine ammonia lyase	L07645|Hal|15109|histidine ammonia lyase
mm9_v1_chr4_+_141302589_141302623	0.424714	FOX{I1,J2}.p2	NM_001081408|Agmat|75986|agmatine ureohydrolase (agmatinase)
mm9_v1_chr2_-_35973217_35973333	0.423835	FOX{I1,J2}.p2	
mm9_v1_chr17_-_45611774_45611886	0.42329	FOX{I1,J2}.p2	AY336501|Spats1|71020|spermatogenesis associated, serine-rich 1	AK016586|Spats1|71020|spermatogenesis associated, serine-rich 1	AK165435|Spats1|71020|spermatogenesis associated, serine-rich 1	BC131909|Spats1|71020|spermatogenesis associated, serine-rich 1	AK005865|Spats1|71020|spermatogenesis associated, serine-rich 1	NM_027649|Spats1|71020|spermatogenesis associated, serine-rich 1
mm9_v1_chr7_+_5018828_5018857	0.42106	FOX{I1,J2}.p2	BC094451|U2af2|22185|U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	BC106134|U2af2|22185|U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2
mm9_v1_chr6_+_48845252_48845281	0.420617	FOX{I1,J2}.p2	BC021880|Abp1|76507|amiloride binding protein 1 (amine oxidase, copper-containing)	NM_029638|Abp1|76507|amiloride binding protein 1 (amine oxidase, copper-containing)	AK144567|Abp1|76507|amiloride binding protein 1 (amine oxidase, copper-containing)	BC034215|Abp1|76507|amiloride binding protein 1 (amine oxidase, copper-containing)
mm9_v1_chr10_+_52111413_52111541	0.420065	FOX{I1,J2}.p2	AK017780|Nepn|66650|nephrocan	AY938536|Nepn|66650|nephrocan	NM_025684|Nepn|66650|nephrocan	AK017656|Nepn|66650|nephrocan	BC132046|Nepn|66650|nephrocan	BC132048|Nepn|66650|nephrocan	AK017842|Nepn|66650|nephrocan
mm9_v1_chr7_+_24086210_24086210	0.418028	FOX{I1,J2}.p2	BC139319|Nlrp4e|446099|NLR family, pyrin domain containing 4E	BC139320|Nlrp4e|446099|NLR family, pyrin domain containing 4E	NM_001004194|Nlrp4e|446099|NLR family, pyrin domain containing 4E
mm9_v1_chr3_+_30501527_30501587	0.417012	FOX{I1,J2}.p2	AK013445|Mynn|80732|myoneurin	AK030898|Mynn|80732|myoneurin	AK147959|Mynn|80732|myoneurin	AK136107|Mynn|80732|myoneurin	AK014315|Mynn|80732|myoneurin	AK019238|Mynn|80732|myoneurin	AK163261|Mynn|80732|myoneurin	AK163264|Mynn|80732|myoneurin	BC007477|Mynn|80732|myoneurin	AK029657|Mynn|80732|myoneurin
mm9_v1_chr10_-_60561786_60561820	0.416473	FOX{I1,J2}.p2	
mm9_v1_chr9_+_45178267_45178361	0.416315	FOX{I1,J2}.p2	NM_022004|Fxyd6|59095|FXYD domain-containing ion transport regulator 6
mm9_v1_chr4_+_100151471_100151479	0.415377	FOX{I1,J2}.p2	AK133379|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	NM_001033773|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	BC150880|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	BC150888|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)	BC172031|Ube2u|381534|ubiquitin-conjugating enzyme E2U (putative)
mm9_v1_chr11_+_98525660_98525683	0.414443	FOX{I1,J2}.p2	AK028645|Gsdma|57911|gasdermin A	AK028698|Gsdma|57911|gasdermin A	NM_021347|Gsdma|57911|gasdermin A	AB033595|Gsdma|57911|gasdermin A	AK029062|Gsdma|57911|gasdermin A
mm9_v1_chr6_-_49213980_49214011	0.413626	FOX{I1,J2}.p2	AK171788|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK172413|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	BC057448|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	BC058764|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK076606|Tra2a|101214|transformer 2 alpha homolog (Drosophila)
mm9_v1_chr17_-_71200462_71200609	0.412096	FOX{I1,J2}.p2	BC005724|Tgif1|21815|TGFB-induced factor homeobox 1	AK008909|Tgif1|21815|TGFB-induced factor homeobox 1	NM_009372|Tgif1|21815|TGFB-induced factor homeobox 1
mm9_v1_chr13_+_54203236_54203344	0.411277	FOX{I1,J2}.p2	AK048238|Sfxn1|14057|sideroflexin 1
mm9_v1_chr4_+_129190824_129190856	0.409816	FOX{I1,J2}.p2	NM_010807|Marcksl1|17357|MARCKS-like 1
mm9_v1_chr4_-_41464365_41464365	0.40834	FOX{I1,J2}.p2	AB231294|1110017D15Rik|73721|RIKEN cDNA 1110017D15 gene	NM_001048005|1110017D15Rik|73721|RIKEN cDNA 1110017D15 gene
mm9_v1_chr10_+_58834161_58834363	0.407598	FOX{I1,J2}.p2	AK178926|P4ha1|18451|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide	AK212609|P4ha1|18451|procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha 1 polypeptide
mm9_v1_chr8_-_46380114_46380132	0.407585	FOX{I1,J2}.p2	BC026555|Klkb1|16621|kallikrein B, plasma 1
mm9_v1_chr12_-_82695968_82696003	0.407241	FOX{I1,J2}.p2	AK005232|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)	AK089101|Med6|69792|mediator of RNA polymerase II transcription, subunit 6 homolog (yeast)
mm9_v1_chr3_+_3508029_3508207	0.406631	FOX{I1,J2}.p2	AK143816|Hnf4g|30942|hepatocyte nuclear factor 4, gamma	NM_013920|Hnf4g|30942|hepatocyte nuclear factor 4, gamma	AJ242626|Hnf4g|30942|hepatocyte nuclear factor 4, gamma	BC125519|Hnf4g|30942|hepatocyte nuclear factor 4, gamma
mm9_v1_chr5_+_140019846_140019918	0.405766	FOX{I1,J2}.p2	AK082472|Uncx|22255|UNC homeobox	NM_013702|Uncx|22255|UNC homeobox	AF247550|Uncx|22255|UNC homeobox	Z96107|Uncx|22255|UNC homeobox	BC051973|Uncx|22255|UNC homeobox	AJ001116|Uncx|22255|UNC homeobox	S83543|Uncx|22255|UNC homeobox
mm9_v1_chr8_+_19784580_19784661	0.405492	FOX{I1,J2}.p2	AK088897|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene
mm9_v1_chr2_-_25110892_25110940	0.404471	FOX{I1,J2}.p2	BC049789|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK163207|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK143124|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK169885|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK019617|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	NM_001082476|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1
mm9_v1_chr11_+_115301840_115301858	0.4039	FOX{I1,J2}.p2	BC147608|4933422H20Rik|432613|RIKEN cDNA 4933422H20 gene	BC157912|4933422H20Rik|432613|RIKEN cDNA 4933422H20 gene	AK133415|4933422H20Rik|432613|RIKEN cDNA 4933422H20 gene	NM_001033775|4933422H20Rik|432613|RIKEN cDNA 4933422H20 gene
mm9_v1_chr8_-_73316331_73316346	0.403505	FOX{I1,J2}.p2	NM_199308|Mast3|546071|microtubule associated serine/threonine kinase 3	AK140821|Mast3|546071|microtubule associated serine/threonine kinase 3
mm9_v1_chr7_-_110940343_110940343	0.403376	FOX{I1,J2}.p2	NM_013619|Olfr67|18368|olfactory receptor 67
mm9_v1_chr6_-_126114938_126114977	0.402019	FOX{I1,J2}.p2	BC065785|Ntf3|18205|neurotrophin 3	AK132586|Ntf3|18205|neurotrophin 3	NM_001164035|Ntf3|18205|neurotrophin 3
mm9_v1_chr15_+_96199877_96199934	0.401133	FOX{I1,J2}.p2	AK014481|Arid2|77044|AT rich interactive domain 2 (ARID, RFX-like)
mm9_v1_chr2_-_105843271_105843398	0.400914	FOX{I1,J2}.p2	BC091774|Dnajc24|99349|DnaJ (Hsp40) homolog, subfamily C, member 24	AY028460|Dnajc24|99349|DnaJ (Hsp40) homolog, subfamily C, member 24
mm9_v1_chr9_+_20016650_20016744	0.399542	FOX{I1,J2}.p2	NM_146903|Olfr871|258905|olfactory receptor 871	BC119201|Olfr871|258905|olfactory receptor 871	BC119203|Olfr871|258905|olfactory receptor 871
mm9_v1_chr1_-_141456740_141456821	0.399347	FOX{I1,J2}.p2	BC111870|Cfhr1|50702|complement factor H-related 1	M29008|Cfhr1|50702|complement factor H-related 1	NM_015780|Cfhr1|50702|complement factor H-related 1
mm9_v1_chr7_+_107685608_107685745	0.399238	FOX{I1,J2}.p2	AK161506|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	NM_183270|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	AK019895|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	AK088786|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC116995|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC116997|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC096605|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	AK008883|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC048574|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8
mm9_v1_chr9_-_58097422_58097566	0.399012	FOX{I1,J2}.p2	AK193824|Pml|18854|promyelocytic leukemia	AK156054|Pml|18854|promyelocytic leukemia	AK157346|Pml|18854|promyelocytic leukemia	AK156279|Pml|18854|promyelocytic leukemia	U33626|Pml|18854|promyelocytic leukemia	AK156175|Pml|18854|promyelocytic leukemia	BC020990|Pml|18854|promyelocytic leukemia	AK137538|Pml|18854|promyelocytic leukemia	AK157035|Pml|18854|promyelocytic leukemia
mm9_v1_chr17_-_66235094_66235137	0.399001	FOX{I1,J2}.p2	NM_009067|Ralbp1|19765|ralA binding protein 1	AK138197|Ralbp1|19765|ralA binding protein 1
mm9_v1_chr7_+_11983263_11983263	0.398697	FOX{I1,J2}.p2	AK141250|Zscan4f|665902|zinc finger and SCAN domain containing 4F	NM_001110316|Zscan4f|665902|zinc finger and SCAN domain containing 4F
mm9_v1_chr4_-_4065205_4065229	0.397783	FOX{I1,J2}.p2	M13227|Penk|18619|preproenkephalin
mm9_v1_chr1_+_90303576_90303673	0.397584	FOX{I1,J2}.p2	AK002814|Spp2|75396|secreted phosphoprotein 2	NM_029269|Spp2|75396|secreted phosphoprotein 2	AJ315513|Spp2|75396|secreted phosphoprotein 2	BC027494|Spp2|75396|secreted phosphoprotein 2
mm9_v1_chr5_-_114830457_114830513	0.397071	FOX{I1,J2}.p2	AK147714|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK163351|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK161199|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK028657|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK041516|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK145295|Kctd10|330171|potassium channel tetramerisation domain containing 10	AK166505|Kctd10|330171|potassium channel tetramerisation domain containing 10	BC006935|Kctd10|330171|potassium channel tetramerisation domain containing 10	NM_001159941|Kctd10|330171|potassium channel tetramerisation domain containing 10	NM_026145|Kctd10|330171|potassium channel tetramerisation domain containing 10
mm9_v1_chr5_+_145965427_145965536	0.39702	FOX{I1,J2}.p2	NM_001167944|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	NM_016683|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK173086|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK019484|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	BC060248|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5
mm9_v1_chr6_+_48504791_48504950	0.396353	FOX{I1,J2}.p2	AK143222|Lrrc61|243371|leucine rich repeat containing 61	NM_001110160|Lrrc61|243371|leucine rich repeat containing 61	NM_177736|Lrrc61|243371|leucine rich repeat containing 61	AK171463|Lrrc61|243371|leucine rich repeat containing 61	AK170792|Lrrc61|243371|leucine rich repeat containing 61	AK136901|Lrrc61|243371|leucine rich repeat containing 61	BC027309|Lrrc61|243371|leucine rich repeat containing 61
mm9_v1_chr11_-_106642684_106642809	0.395767	FOX{I1,J2}.p2	AK149022|Ddx5|13207|DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
mm9_v1_chrX_+_34666757_34666828	0.39564	FOX{I1,J2}.p2	NM_025937|Nkap|67050|NFKB activating protein	BC026774|Nkap|67050|NFKB activating protein	AK011492|Nkap|67050|NFKB activating protein	AY388959|Nkap|67050|NFKB activating protein	AK038344|Nkap|67050|NFKB activating protein	AK076125|Nkap|67050|NFKB activating protein	AK012826|Nkap|67050|NFKB activating protein	AK089943|Nkap|67050|NFKB activating protein
mm9_v1_chr11_+_17111895_17111966	0.394725	FOX{I1,J2}.p2	NM_178909|Wdr92|103784|WD repeat domain 92	AK088218|Wdr92|103784|WD repeat domain 92	AK047691|Wdr92|103784|WD repeat domain 92	AK142228|Wdr92|103784|WD repeat domain 92	AK033294|Wdr92|103784|WD repeat domain 92	BC096540|Wdr92|103784|WD repeat domain 92
mm9_v1_chr6_-_123803207_123803207	0.394051	FOX{I1,J2}.p2	NM_001104641|Vmn2r25|545874|vomeronasal 2, receptor 25
mm9_v1_chr18_+_64500017_64500040	0.393551	FOX{I1,J2}.p2	AY242995|Onecut2|225631|one cut domain, family member 2	NM_194268|Onecut2|225631|one cut domain, family member 2	BC100750|Onecut2|225631|one cut domain, family member 2	BC100755|Onecut2|225631|one cut domain, family member 2	BC103668|Onecut2|225631|one cut domain, family member 2
mm9_v1_chr6_-_55631039_55631067	0.392966	FOX{I1,J2}.p2	AK144303|Neurod6|11922|neurogenic differentiation 6	BC087831|Neurod6|11922|neurogenic differentiation 6	U29086|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr10_+_59165307_59165416	0.392824	FOX{I1,J2}.p2	AK083520|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK049521|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK050113|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK046049|Cbara1|216001|calcium binding atopy-related autoantigen 1	BC026566|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK077605|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK029884|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK052485|Cbara1|216001|calcium binding atopy-related autoantigen 1	BC018320|Cbara1|216001|calcium binding atopy-related autoantigen 1	BC023022|Cbara1|216001|calcium binding atopy-related autoantigen 1	NM_144822|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK085553|Cbara1|216001|calcium binding atopy-related autoantigen 1	AK051470|Cbara1|216001|calcium binding atopy-related autoantigen 1
mm9_v1_chr14_+_77436555_77436670	0.391518	FOX{I1,J2}.p2	AK077161|Ccdc122|108811|coiled-coil domain containing 122	NM_175369|Ccdc122|108811|coiled-coil domain containing 122	BC096577|Ccdc122|108811|coiled-coil domain containing 122	BC138881|Ccdc122|108811|coiled-coil domain containing 122	BC138883|Ccdc122|108811|coiled-coil domain containing 122	BC145455|Ccdc122|108811|coiled-coil domain containing 122
mm9_v1_chr6_-_136870688_136870700	0.39104	FOX{I1,J2}.p2	BC104406|Erp27|69187|endoplasmic reticulum protein 27	BC104407|Erp27|69187|endoplasmic reticulum protein 27	AK007684|Erp27|69187|endoplasmic reticulum protein 27	AK007800|Erp27|69187|endoplasmic reticulum protein 27	AK131830|Erp27|69187|endoplasmic reticulum protein 27	NM_026983|Erp27|69187|endoplasmic reticulum protein 27
mm9_v1_chr7_+_30644997_30645134	0.390358	FOX{I1,J2}.p2	NM_172740|Zfp420|233058|zinc finger protein 420	AK029387|Zfp420|233058|zinc finger protein 420	AK045435|Zfp420|233058|zinc finger protein 420	BC050249|Zfp420|233058|zinc finger protein 420	BC055817|Zfp420|233058|zinc finger protein 420	AK045821|Zfp420|233058|zinc finger protein 420
mm9_v1_chr6_-_134837738_134837876	0.390052	FOX{I1,J2}.p2	U46923|Gpr19|14760|G protein-coupled receptor 19	BC050187|Gpr19|14760|G protein-coupled receptor 19	NM_001167697|Gpr19|14760|G protein-coupled receptor 19	NM_001167699|Gpr19|14760|G protein-coupled receptor 19	NM_008157|Gpr19|14760|G protein-coupled receptor 19
mm9_v1_chr16_-_4001679_4001679	0.389387	FOX{I1,J2}.p2	BC065125|Slx4|52864|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)	NM_177472|Slx4|52864|SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)
mm9_v1_chr13_+_108834624_108834692	0.388667	FOX{I1,J2}.p2	BC069965|2810008M24Rik|75616|RIKEN cDNA 2810008M24 gene	AK088529|2810008M24Rik|75616|RIKEN cDNA 2810008M24 gene	AK139507|2810008M24Rik|75616|RIKEN cDNA 2810008M24 gene	NM_001048250|2810008M24Rik|75616|RIKEN cDNA 2810008M24 gene
mm9_v1_chr15_-_97536251_97536289	0.388573	FOX{I1,J2}.p2	AK009765|Rpap3|71919|RNA polymerase II associated protein 3	NM_028003|Rpap3|71919|RNA polymerase II associated protein 3	BC004046|Rpap3|71919|RNA polymerase II associated protein 3
mm9_v1_chr19_+_55328128_55328228	0.388019	FOX{I1,J2}.p2	AK150542|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK150663|Acsl5|433256|acyl-CoA synthetase long-chain family member 5	AK145894|Acsl5|433256|acyl-CoA synthetase long-chain family member 5
mm9_v1_chr3_-_83645460_83645488	0.387644	FOX{I1,J2}.p2	AF124741|Tlr2|24088|toll-like receptor 2	AF165189|Tlr2|24088|toll-like receptor 2	AF185284|Tlr2|24088|toll-like receptor 2	AF216289|Tlr2|24088|toll-like receptor 2
mm9_v1_chr12_+_114312582_114312712	0.387477	FOX{I1,J2}.p2	AF522069|Tex22|75671|testis expressed gene 22	NM_029381|Tex22|75671|testis expressed gene 22
mm9_v1_chr18_+_49992650_49992666	0.386743	FOX{I1,J2}.p2	AY590892|Dmxl1|240283|Dmx-like 1	NM_001081371|Dmxl1|240283|Dmx-like 1
mm9_v1_chr3_+_94176747_94176784	0.38376	FOX{I1,J2}.p2	NM_011281|Rorc|19885|RAR-related orphan receptor gamma	AK160122|Rorc|19885|RAR-related orphan receptor gamma	BC014804|Rorc|19885|RAR-related orphan receptor gamma	U43508|Rorc|19885|RAR-related orphan receptor gamma
mm9_v1_chr18_+_35750406_35750586	0.3805	FOX{I1,J2}.p2	AK139050|Matr3|17184|matrin 3	AK084822|Matr3|17184|matrin 3	AK148059|Matr3|17184|matrin 3
mm9_v1_chr6_+_113408650_113408888	0.378686	FOX{I1,J2}.p2	AK169498|Il17re|57890|interleukin 17 receptor E	AK044815|Il17re|57890|interleukin 17 receptor E	BC069861|Il17re|57890|interleukin 17 receptor E	AK046713|Il17re|57890|interleukin 17 receptor E	AF458068|Il17re|57890|interleukin 17 receptor E	DQ092339|Il17re|57890|interleukin 17 receptor E	DQ092340|Il17re|57890|interleukin 17 receptor E	DQ092341|Il17re|57890|interleukin 17 receptor E	NM_001034029|Il17re|57890|interleukin 17 receptor E	NM_001034031|Il17re|57890|interleukin 17 receptor E
mm9_v1_chr14_+_55506625_55506792	0.377812	FOX{I1,J2}.p2	AK020321|Bcl2l2|12050|BCL2-like 2	AK020923|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr6_-_112646587_112646665	0.376946	FOX{I1,J2}.p2	AF205278|Rad18|58186|RAD18 homolog (S. cerevisiae)	BC011120|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK048975|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK028505|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK012795|Rad18|58186|RAD18 homolog (S. cerevisiae)	AK030043|Rad18|58186|RAD18 homolog (S. cerevisiae)	NM_001167730|Rad18|58186|RAD18 homolog (S. cerevisiae)	NM_021385|Rad18|58186|RAD18 homolog (S. cerevisiae)
mm9_v1_chr11_+_87476588_87476588	0.376853	FOX{I1,J2}.p2	AK032782|Rnf43|207742|ring finger protein 43	NM_172448|Rnf43|207742|ring finger protein 43
mm9_v1_chr5_-_5559500_5559542	0.376784	FOX{I1,J2}.p2	NM_153116|Gtpbp10|207704|GTP-binding protein 10 (putative)	BC034507|Gtpbp10|207704|GTP-binding protein 10 (putative)	AK139595|Gtpbp10|207704|GTP-binding protein 10 (putative)	AK160252|Gtpbp10|207704|GTP-binding protein 10 (putative)
mm9_v1_chr1_+_87942437_87942543	0.376693	FOX{I1,J2}.p2	BC137675|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	BC144821|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144992|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144993|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene
mm9_v1_chr4_-_88928049_88928095	0.375359	FOX{I1,J2}.p2	AK155307|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	AF044335|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	AF044336|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	L76150|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A	NM_001040654|Cdkn2a|12578|cyclin-dependent kinase inhibitor 2A
mm9_v1_chr8_-_75005707_75005831	0.374766	FOX{I1,J2}.p2	AK090231|Slc35e1|270066|solute carrier family 35, member E1	AK182855|Slc35e1|270066|solute carrier family 35, member E1
mm9_v1_chr10_-_5734448_5734544	0.373997	FOX{I1,J2}.p2	EU791538|Esr1|13982|estrogen receptor 1 (alpha)	AK036627|Esr1|13982|estrogen receptor 1 (alpha)	NM_007956|Esr1|13982|estrogen receptor 1 (alpha)	AJ272164|Esr1|13982|estrogen receptor 1 (alpha)	AK039911|Esr1|13982|estrogen receptor 1 (alpha)	AK041525|Esr1|13982|estrogen receptor 1 (alpha)	AK033270|Esr1|13982|estrogen receptor 1 (alpha)
mm9_v1_chr18_+_65210574_65210693	0.373726	FOX{I1,J2}.p2	BC082281|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr3_+_97432797_97432807	0.372714	FOX{I1,J2}.p2	BC022991|Fmo5|14263|flavin containing monooxygenase 5
mm9_v1_chr18_+_85104396_85104433	0.372114	FOX{I1,J2}.p2	AK082809|Fbxo15|50764|F-box protein 15	AK163224|Fbxo15|50764|F-box protein 15	AK166591|Fbxo15|50764|F-box protein 15	AK166599|Fbxo15|50764|F-box protein 15	AK167118|Fbxo15|50764|F-box protein 15	NM_015798|Fbxo15|50764|F-box protein 15	AK167270|Fbxo15|50764|F-box protein 15	AK166918|Fbxo15|50764|F-box protein 15	AF176530|Fbxo15|50764|F-box protein 15
mm9_v1_chr13_-_27656440_27656472	0.37209	FOX{I1,J2}.p2	BC064762|Prl8a9|67310|prolactin family8, subfamily a, member 9	AF158744|Prl8a9|67310|prolactin family8, subfamily a, member 9	AK005409|Prl8a9|67310|prolactin family8, subfamily a, member 9	AK005494|Prl8a9|67310|prolactin family8, subfamily a, member 9	NM_023332|Prl8a9|67310|prolactin family8, subfamily a, member 9
mm9_v1_chr1_-_184271617_184271724	0.371933	FOX{I1,J2}.p2	AK162188|Fbxo28|67948|F-box protein 28	AK162091|Fbxo28|67948|F-box protein 28	AK122295|Fbxo28|67948|F-box protein 28
mm9_v1_chr9_-_49294279_49294329	0.371742	FOX{I1,J2}.p2	AK076457|Ttc12|235330|tetratricopeptide repeat domain 12	AK054350|Ttc12|235330|tetratricopeptide repeat domain 12	NM_172770|Ttc12|235330|tetratricopeptide repeat domain 12
mm9_v1_chr8_-_74998992_74999131	0.370831	FOX{I1,J2}.p2	BC032191|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK144328|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AF536541|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK049765|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	AK017525|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	BC020488|Cherp|27967|calcium homeostasis endoplasmic reticulum protein	NM_138585|Cherp|27967|calcium homeostasis endoplasmic reticulum protein
mm9_v1_chr16_-_95751971_95751971	0.370767	FOX{I1,J2}.p2	AB073078|Erg|13876|avian erythroblastosis virus E-26 (v-ets) oncogene related	AB073079|Erg|13876|avian erythroblastosis virus E-26 (v-ets) oncogene related	AB073080|Erg|13876|avian erythroblastosis virus E-26 (v-ets) oncogene related	NM_133659|Erg|13876|avian erythroblastosis virus E-26 (v-ets) oncogene related
mm9_v1_chr2_+_38853828_38853850	0.370543	FOX{I1,J2}.p2	NM_029687|Wdr38|76646|WD repeat domain 38	AK007246|Wdr38|76646|WD repeat domain 38	BC115629|Wdr38|76646|WD repeat domain 38
mm9_v1_chr3_-_144558974_144558974	0.3694	FOX{I1,J2}.p2	AK139132|Gm6289|622139|predicted gene 6289	NM_001039222|Gm6289|622139|predicted gene 6289
mm9_v1_chr2_+_74707394_74707441	0.368582	FOX{I1,J2}.p2	AK207939|Mtx2|53375|metaxin 2	AK212612|Mtx2|53375|metaxin 2	AK216047|Mtx2|53375|metaxin 2
mm9_v1_chr6_+_123728988_123728988	0.368287	FOX{I1,J2}.p2	NM_001104639|Vmn2r24|243628|vomeronasal 2, receptor 24
mm9_v1_chr17_+_26275630_26275910	0.368187	FOX{I1,J2}.p2	NM_001159598|Axin1|12005|axin 1	NM_009733|Axin1|12005|axin 1	AF009011|Axin1|12005|axin 1	BC113171|Axin1|12005|axin 1	BC011544|Axin1|12005|axin 1
mm9_v1_chr19_-_40624894_40625122	0.368115	FOX{I1,J2}.p2	AK195951|Aldh18a1|56454|aldehyde dehydrogenase 18 family, member A1
mm9_v1_chr11_+_80671864_80671927	0.367705	FOX{I1,J2}.p2	AK006357|Spaca3|75622|sperm acrosome associated 3	BC100503|Spaca3|75622|sperm acrosome associated 3	NM_029367|Spaca3|75622|sperm acrosome associated 3	AY572448|Spaca3|75622|sperm acrosome associated 3
mm9_v1_chr15_-_57723993_57724037	0.367447	FOX{I1,J2}.p2	AK011499|Derl1|67819|Der1-like domain family, member 1	AK161702|Derl1|67819|Der1-like domain family, member 1	BC003454|Derl1|67819|Der1-like domain family, member 1	BC085490|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr9_-_58589362_58589365	0.366689	FOX{I1,J2}.p2	AK010725|2410076I21Rik|73673|RIKEN cDNA 2410076I21 gene	BC038688|2410076I21Rik|73673|RIKEN cDNA 2410076I21 gene	NM_028598|2410076I21Rik|73673|RIKEN cDNA 2410076I21 gene
mm9_v1_chr14_-_73785068_73785151	0.366499	FOX{I1,J2}.p2	NM_008410|Itm2b|16432|integral membrane protein 2B	U76253|Itm2b|16432|integral membrane protein 2B	AK077482|Itm2b|16432|integral membrane protein 2B	BC010320|Itm2b|16432|integral membrane protein 2B	AK076139|Itm2b|16432|integral membrane protein 2B	AK152068|Itm2b|16432|integral membrane protein 2B	BC021786|Itm2b|16432|integral membrane protein 2B	AK152983|Itm2b|16432|integral membrane protein 2B	AK159619|Itm2b|16432|integral membrane protein 2B	AB030203|Itm2b|16432|integral membrane protein 2B	AK150378|Itm2b|16432|integral membrane protein 2B	AK150396|Itm2b|16432|integral membrane protein 2B	AK151714|Itm2b|16432|integral membrane protein 2B	AK151889|Itm2b|16432|integral membrane protein 2B	AK152516|Itm2b|16432|integral membrane protein 2B	AK152650|Itm2b|16432|integral membrane protein 2B	AK159378|Itm2b|16432|integral membrane protein 2B	AK160725|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr3_-_87689483_87689550	0.365811	FOX{I1,J2}.p2	BC052072|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	NM_033573|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC082784|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AF273750|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AK078394|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC027831|Prcc|94315|papillary renal cell carcinoma (translocation-associated)
mm9_v1_chr19_+_38470458_38470592	0.365448	FOX{I1,J2}.p2	BC137663|Tmem20|240660|transmembrane protein 20	BC137664|Tmem20|240660|transmembrane protein 20	AK041618|Tmem20|240660|transmembrane protein 20	NM_175507|Tmem20|240660|transmembrane protein 20	AK030517|Tmem20|240660|transmembrane protein 20	AK171987|Tmem20|240660|transmembrane protein 20	AK052365|Tmem20|240660|transmembrane protein 20
mm9_v1_chr12_-_32319353_32319551	0.364854	FOX{I1,J2}.p2	BC003303|Bcap29|12033|B-cell receptor-associated protein 29	BC021661|Bcap29|12033|B-cell receptor-associated protein 29	NM_007530|Bcap29|12033|B-cell receptor-associated protein 29	AK090068|Bcap29|12033|B-cell receptor-associated protein 29	AK144754|Bcap29|12033|B-cell receptor-associated protein 29	NM_001164090|Bcap29|12033|B-cell receptor-associated protein 29
mm9_v1_chr13_-_24923314_24923388	0.363873	FOX{I1,J2}.p2	AK008624|Acot13|66834|acyl-CoA thioesterase 13	BC018165|Acot13|66834|acyl-CoA thioesterase 13	BC096567|Acot13|66834|acyl-CoA thioesterase 13	AK002261|Acot13|66834|acyl-CoA thioesterase 13	NM_025790|Acot13|66834|acyl-CoA thioesterase 13	AK144523|Acot13|66834|acyl-CoA thioesterase 13
mm9_v1_chr6_-_93628981_93629110	0.362636	FOX{I1,J2}.p2	AF027505|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1	AK081387|Magi1|14924|membrane associated guanylate kinase, WW and PDZ domain containing 1
mm9_v1_chr14_-_99498905_99499000	0.361987	FOX{I1,J2}.p2	AK012840|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)	BC027357|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)	AK038313|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)	NM_028315|Dis3|72662|DIS3 mitotic control homolog (S. cerevisiae)
mm9_v1_chr10_-_38541584_38541584	0.360783	FOX{I1,J2}.p2	NM_001177783|Rfpl4b|215919|ret finger protein-like 4B
mm9_v1_chr3_+_157229838_157229863	0.360046	FOX{I1,J2}.p2	BC058742|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)	NM_011196|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)	D10204|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)	D13321|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)	D17406|Ptger3|19218|prostaglandin E receptor 3 (subtype EP3)
mm9_v1_chr2_-_162915336_162915336	0.359765	FOX{I1,J2}.p2	AK019131|Gtsf1l|68236|gametocyte specific factor 1-like	NM_026630|Gtsf1l|68236|gametocyte specific factor 1-like
mm9_v1_chr16_+_48872720_48872733	0.359228	FOX{I1,J2}.p2	NM_181596|Retnlg|245195|resistin like gamma
mm9_v1_chr6_+_58783693_58783693	0.358798	FOX{I1,J2}.p2	BC042574|Herc3|73998|hect domain and RLD 3	BC145978|Herc3|73998|hect domain and RLD 3	BC145980|Herc3|73998|hect domain and RLD 3	NM_028705|Herc3|73998|hect domain and RLD 3
mm9_v1_chr10_-_114622068_114622080	0.357953	FOX{I1,J2}.p2	BC120514|Tph2|216343|tryptophan hydroxylase 2	BC125430|Tph2|216343|tryptophan hydroxylase 2	AY090565|Tph2|216343|tryptophan hydroxylase 2	NM_173391|Tph2|216343|tryptophan hydroxylase 2
mm9_v1_chr2_-_105843408_105843434	0.357735	FOX{I1,J2}.p2	BC030072|Dnajc24|99349|DnaJ (Hsp40) homolog, subfamily C, member 24	AK011571|Dnajc24|99349|DnaJ (Hsp40) homolog, subfamily C, member 24
mm9_v1_chr4_+_62220880_62220880	0.35698	FOX{I1,J2}.p2	AJ250999|Rgs3|50780|regulator of G-protein signaling 3	NM_019492|Rgs3|50780|regulator of G-protein signaling 3
mm9_v1_chr6_-_135204232_135204353	0.356975	FOX{I1,J2}.p2	D87325|Gsg1|14840|germ cell-specific gene 1	NM_001080553|Gsg1|14840|germ cell-specific gene 1	NM_010352|Gsg1|14840|germ cell-specific gene 1
mm9_v1_chr13_-_91947224_91947313	0.356576	FOX{I1,J2}.p2	BC024496|Zcchc9|69085|zinc finger, CCHC domain containing 9	AK007541|Zcchc9|69085|zinc finger, CCHC domain containing 9	AK044802|Zcchc9|69085|zinc finger, CCHC domain containing 9	NM_145453|Zcchc9|69085|zinc finger, CCHC domain containing 9	AK051610|Zcchc9|69085|zinc finger, CCHC domain containing 9
mm9_v1_chr1_-_184679281_184679310	0.356155	FOX{I1,J2}.p2	BC150917|4922505E12Rik|433386|RIKEN cDNA 4922505E12 gene	AK132754|4922505E12Rik|433386|RIKEN cDNA 4922505E12 gene	NM_001033547|4922505E12Rik|433386|RIKEN cDNA 4922505E12 gene
mm9_v1_chr5_-_91831834_91832019	0.355785	FOX{I1,J2}.p2	AK050206|Btc|12223|betacellulin, epidermal growth factor family member	L08394|Btc|12223|betacellulin, epidermal growth factor family member	AK046658|Btc|12223|betacellulin, epidermal growth factor family member	BC119152|Btc|12223|betacellulin, epidermal growth factor family member	BC119154|Btc|12223|betacellulin, epidermal growth factor family member	BC144906|Btc|12223|betacellulin, epidermal growth factor family member	AK076272|Btc|12223|betacellulin, epidermal growth factor family member	NM_007568|Btc|12223|betacellulin, epidermal growth factor family member	AK164633|Btc|12223|betacellulin, epidermal growth factor family member
mm9_v1_chr6_+_89926164_89926164	0.354924	FOX{I1,J2}.p2	NM_053229|Vmn1r46|113856|vomeronasal 1 receptor 46
mm9_v1_chr6_-_23605087_23605135	0.354203	FOX{I1,J2}.p2	AY155440|Rnf148|71300|ring finger protein 148	AK017027|Rnf148|71300|ring finger protein 148	NM_027754|Rnf148|71300|ring finger protein 148
mm9_v1_chr9_+_3404047_3404117	0.354112	FOX{I1,J2}.p2	BC125483|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC125485|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK083386|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK045423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	NM_027545|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK014327|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	AK031423|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC100536|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC051218|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)	BC043480|Cwf19l2|244672|CWF19-like 2, cell cycle control (S. pombe)
mm9_v1_chr5_-_17394564_17394590	0.35404	FOX{I1,J2}.p2	AK128908|Cd36|12491|CD36 antigen
mm9_v1_chr12_+_36652206_36652279	0.353178	FOX{I1,J2}.p2	BC023499|Agr3|403205|anterior gradient homolog 3 (Xenopus laevis)	NM_207531|Agr3|403205|anterior gradient homolog 3 (Xenopus laevis)	AK053177|Agr3|403205|anterior gradient homolog 3 (Xenopus laevis)
mm9_v1_chr10_+_41607235_41607307	0.351596	FOX{I1,J2}.p2	NM_001013370|Sesn1|140742|sestrin 1	BC055753|Sesn1|140742|sestrin 1	AK160083|Sesn1|140742|sestrin 1	AK159531|Sesn1|140742|sestrin 1
mm9_v1_chr15_+_101303908_101304071	0.350733	FOX{I1,J2}.p2	AK161149|Krt86|16679|keratin 86	NM_010667|Krt86|16679|keratin 86	BC139222|Krt86|16679|keratin 86	X99143|Krt86|16679|keratin 86
mm9_v1_chr7_-_25118944_25118983	0.350011	FOX{I1,J2}.p2	BC125456|1700008P20Rik|69301|RIKEN cDNA 1700008P20 gene	BC125458|1700008P20Rik|69301|RIKEN cDNA 1700008P20 gene	AK005787|1700008P20Rik|69301|RIKEN cDNA 1700008P20 gene	NM_001163810|1700008P20Rik|69301|RIKEN cDNA 1700008P20 gene
mm9_v1_chr4_-_129296301_129296370	0.349883	FOX{I1,J2}.p2	BC031493|Iqcc|230767|IQ motif containing C	NM_198026|Iqcc|230767|IQ motif containing C	AK083217|Iqcc|230767|IQ motif containing C
mm9_v1_chr15_-_51823257_51823330	0.349092	FOX{I1,J2}.p2	AK145591|Rad21|19357|RAD21 homolog (S. pombe)	AK168718|Rad21|19357|RAD21 homolog (S. pombe)	NM_009009|Rad21|19357|RAD21 homolog (S. pombe)
mm9_v1_chr12_-_55304834_55304865	0.348154	FOX{I1,J2}.p2	AJ310548|Egln3|112407|EGL nine homolog 3 (C. elegans)	AK044787|Egln3|112407|EGL nine homolog 3 (C. elegans)	NM_028133|Egln3|112407|EGL nine homolog 3 (C. elegans)
mm9_v1_chr6_+_129347314_129347343	0.347209	FOX{I1,J2}.p2	BC064054|Clec1b|56760|C-type lectin domain family 1, member b	NM_019985|Clec1b|56760|C-type lectin domain family 1, member b	AK007925|Clec1b|56760|C-type lectin domain family 1, member b
mm9_v1_chr19_+_11771544_11771582	0.346463	FOX{I1,J2}.p2	AK143410|Gm97|225923|predicted gene 97	NM_001033283|Gm97|225923|predicted gene 97	BC141228|Gm97|225923|predicted gene 97	BC145553|Gm97|225923|predicted gene 97	BC094934|Gm97|225923|predicted gene 97
mm9_v1_chr7_+_36234110_36234197	0.345252	FOX{I1,J2}.p2	AF192310|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	NM_001199015|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	AK142541|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	NM_001199016|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	AK164714|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	BC010746|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	AJ249198|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9	NM_021291|Slc7a9|30962|solute carrier family 7 (cationic amino acid transporter, y+ system), member 9
mm9_v1_chr9_+_106091656_106091698	0.344616	FOX{I1,J2}.p2	BC054453|Wdr82|77305|WD repeat domain containing 82	BC112907|Wdr82|77305|WD repeat domain containing 82	BC044669|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr7_-_20093663_20093722	0.344236	FOX{I1,J2}.p2	BC043666|Bloc1s3|232946|biogenesis of lysosome-related organelles complex-1, subunit 3	NM_177692|Bloc1s3|232946|biogenesis of lysosome-related organelles complex-1, subunit 3	AK054006|Bloc1s3|232946|biogenesis of lysosome-related organelles complex-1, subunit 3	AK153811|Bloc1s3|232946|biogenesis of lysosome-related organelles complex-1, subunit 3
mm9_v1_chr3_+_87734217_87734248	0.344134	FOX{I1,J2}.p2	AK053778|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2	AK155979|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2	AK160738|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2	NM_177663|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2	BC098326|Isg20l2|229504|interferon stimulated exonuclease gene 20-like 2
mm9_v1_chr8_+_87432522_87432575	0.34363	FOX{I1,J2}.p2	AK145192|Dnase2a|13423|deoxyribonuclease II alpha	NM_010062|Dnase2a|13423|deoxyribonuclease II alpha	AK167277|Dnase2a|13423|deoxyribonuclease II alpha	BC058609|Dnase2a|13423|deoxyribonuclease II alpha
mm9_v1_chr19_-_36700493_36700513	0.343078	FOX{I1,J2}.p2	AK149600|1500017E21Rik|668215|RIKEN cDNA 1500017E21 gene	AK149390|1500017E21Rik|668215|RIKEN cDNA 1500017E21 gene
mm9_v1_chr16_-_44016471_44016548	0.342837	FOX{I1,J2}.p2	BC037472|Gramd1c|207798|GRAM domain containing 1C	AK129016|Gramd1c|207798|GRAM domain containing 1C	AK035257|Gramd1c|207798|GRAM domain containing 1C	NM_153528|Gramd1c|207798|GRAM domain containing 1C
mm9_v1_chr10_-_51915049_51915049	0.342068	FOX{I1,J2}.p2	NM_011282|Ros1|19886|Ros1 proto-oncogene	U15443|Ros1|19886|Ros1 proto-oncogene
mm9_v1_chr6_-_55631085_55631098	0.340743	FOX{I1,J2}.p2	AK144377|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr7_+_109358966_109359049	0.33811	FOX{I1,J2}.p2	AK134287|Pgap2|233575|post-GPI attachment to proteins 2
mm9_v1_chr17_-_40931024_40931046	0.337866	FOX{I1,J2}.p2	AK018856|Crisp2|22024|cysteine-rich secretory protein 2	M25533|Crisp2|22024|cysteine-rich secretory protein 2	NM_009420|Crisp2|22024|cysteine-rich secretory protein 2	BC049615|Crisp2|22024|cysteine-rich secretory protein 2
mm9_v1_chr13_-_60278859_60278952	0.337606	FOX{I1,J2}.p2	NM_008086|Gas1|14451|growth arrest specific 1
mm9_v1_chr5_+_121364826_121364874	0.337469	FOX{I1,J2}.p2	NM_133893|Oas1d|100535|2'-5' oligoadenylate synthetase 1D	AK054465|Oas1d|100535|2'-5' oligoadenylate synthetase 1D	AK136001|Oas1d|100535|2'-5' oligoadenylate synthetase 1D	AY055829|Oas1d|100535|2'-5' oligoadenylate synthetase 1D	AB067532|Oas1d|100535|2'-5' oligoadenylate synthetase 1D	BC052835|Oas1d|100535|2'-5' oligoadenylate synthetase 1D
mm9_v1_chr9_-_52484889_52484906	0.337053	FOX{I1,J2}.p2	AK053489|AI593442|330941|expressed sequence AI593442
mm9_v1_chr15_+_6395353_6395370	0.336808	FOX{I1,J2}.p2	X05475|C9|12279|complement component 9
mm9_v1_chr8_-_126384108_126384108	0.33674	FOX{I1,J2}.p2	BC036300|1700054N08Rik|73420|RIKEN cDNA 1700054N08 gene	NM_028536|1700054N08Rik|73420|RIKEN cDNA 1700054N08 gene
mm9_v1_chr16_+_33518414_33518431	0.336591	FOX{I1,J2}.p2	NM_134251|Slc12a8|171286|solute carrier family 12 (potassium/chloride transporters), member 8	AF319951|Slc12a8|171286|solute carrier family 12 (potassium/chloride transporters), member 8
mm9_v1_chr12_-_85741801_85741813	0.336467	FOX{I1,J2}.p2	AK079267|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK002618|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5
mm9_v1_chr3_+_97432726_97432760	0.335837	FOX{I1,J2}.p2	AK162951|Fmo5|14263|flavin containing monooxygenase 5	NM_001161763|Fmo5|14263|flavin containing monooxygenase 5	AK147040|Fmo5|14263|flavin containing monooxygenase 5	NM_001161765|Fmo5|14263|flavin containing monooxygenase 5	NM_010232|Fmo5|14263|flavin containing monooxygenase 5
mm9_v1_chrX_+_8849905_8850039	0.334957	FOX{I1,J2}.p2	AK007734|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	NM_023500|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	AY534248|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	BC125618|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog	BC125620|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog
mm9_v1_chr18_+_75169426_75169445	0.334649	FOX{I1,J2}.p2	
mm9_v1_chr11_+_4795308_4795373	0.331804	FOX{I1,J2}.p2	AK040311|Thoc5|107829|THO complex 5	AK050734|Thoc5|107829|THO complex 5	NM_172438|Thoc5|107829|THO complex 5	BC039758|Thoc5|107829|THO complex 5	AK087099|Thoc5|107829|THO complex 5
mm9_v1_chr10_+_127196776_127196901	0.331791	FOX{I1,J2}.p2	AK136574|Rdh1|107605|retinol dehydrogenase 1 (all trans)	NM_080436|Rdh1|107605|retinol dehydrogenase 1 (all trans)	AK132181|Rdh9|103142|retinol dehydrogenase 9	AY028928|Rdh1|107605|retinol dehydrogenase 1 (all trans)	BC137930|Rdh1|107605|retinol dehydrogenase 1 (all trans)
mm9_v1_chr11_-_104411728_104411933	0.330864	FOX{I1,J2}.p2	AK039377|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK148278|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC023187|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	AK161471|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC157955|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172100|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	BC172149|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)	NM_145436|Cdc27|217232|cell division cycle 27 homolog (S. cerevisiae)
mm9_v1_chr1_+_108831025_108831035	0.329942	FOX{I1,J2}.p2	AK009018|Serpinb12|71869|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12	NM_027971|Serpinb12|71869|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12
mm9_v1_chr6_-_83456775_83456962	0.329275	FOX{I1,J2}.p2	AK167071|Dguok|27369|deoxyguanosine kinase	U90524|Dguok|27369|deoxyguanosine kinase	AJ133749|Dguok|27369|deoxyguanosine kinase	AY037862|Dguok|27369|deoxyguanosine kinase	BC012647|Dguok|27369|deoxyguanosine kinase	AK035281|Dguok|27369|deoxyguanosine kinase	BC094920|Dguok|27369|deoxyguanosine kinase	NM_001162521|Dguok|27369|deoxyguanosine kinase	NM_013764|Dguok|27369|deoxyguanosine kinase
mm9_v1_chrX_+_72627673_72627773	0.329216	FOX{I1,J2}.p2	NM_026126|Fundc2|67391|FUN14 domain containing 2	AK013460|Fundc2|67391|FUN14 domain containing 2	AK014705|Fundc2|67391|FUN14 domain containing 2	AK031214|Fundc2|67391|FUN14 domain containing 2	BC049566|Fundc2|67391|FUN14 domain containing 2	BC061464|Fundc2|67391|FUN14 domain containing 2	AY234858|Fundc2|67391|FUN14 domain containing 2
mm9_v1_chr11_-_115794529_115794818	0.329124	FOX{I1,J2}.p2	BC066176|Recql5|170472|RecQ protein-like 5	BC053086|Recql5|170472|RecQ protein-like 5	BC060070|Recql5|170472|RecQ protein-like 5	BC059000|Recql5|170472|RecQ protein-like 5	AK029060|Recql5|170472|RecQ protein-like 5	AK083513|Recql5|170472|RecQ protein-like 5
mm9_v1_chr17_-_65944300_65944335	0.328712	FOX{I1,J2}.p2	AK149040|Vapa|30960|vesicle-associated membrane protein, associated protein A
mm9_v1_chr15_+_100965071_100965110	0.328342	FOX{I1,J2}.p2	AK134712|Acvrl1|11482|activin A receptor, type II-like 1	AK170870|Acvrl1|11482|activin A receptor, type II-like 1	CT010330|Acvrl1|11482|activin A receptor, type II-like 1
mm9_v1_chr10_+_19341803_19341845	0.327351	FOX{I1,J2}.p2	AK139024|Il22ra2|237310|interleukin 22 receptor, alpha 2	AK040641|Il22ra2|237310|interleukin 22 receptor, alpha 2	AK138913|Il22ra2|237310|interleukin 22 receptor, alpha 2	NM_178258|Il22ra2|237310|interleukin 22 receptor, alpha 2	AJ555484|Il22ra2|237310|interleukin 22 receptor, alpha 2	BC126872|Il22ra2|237310|interleukin 22 receptor, alpha 2	BC124998|Il22ra2|237310|interleukin 22 receptor, alpha 2	AF493604|Il22ra2|237310|interleukin 22 receptor, alpha 2
mm9_v1_chr13_-_29947456_29947544	0.326657	FOX{I1,J2}.p2	BC016073|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	NM_144536|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK158546|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK041864|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK018346|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK169761|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK082629|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK045506|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1
mm9_v1_chr3_-_10208480_10208567	0.325792	FOX{I1,J2}.p2	M28726|Fabp4|11770|fatty acid binding protein 4, adipocyte	U96149|Fabp9|21884|fatty acid binding protein 9, testis	CT010390|Fabp4|11770|fatty acid binding protein 4, adipocyte	K02109|Fabp4|11770|fatty acid binding protein 4, adipocyte	BC018558|Fabp4|11770|fatty acid binding protein 4, adipocyte	BC054426|Fabp4|11770|fatty acid binding protein 4, adipocyte
mm9_v1_chr10_+_39332934_39333058	0.325469	FOX{I1,J2}.p2	AK037407|Traf3ip2|103213|TRAF3 interacting protein 2	BC138234|Traf3ip2|103213|TRAF3 interacting protein 2	BC138235|Traf3ip2|103213|TRAF3 interacting protein 2	AK031556|Traf3ip2|103213|TRAF3 interacting protein 2	AK098107|Traf3ip2|103213|TRAF3 interacting protein 2	BC096483|Traf3ip2|103213|TRAF3 interacting protein 2
mm9_v1_chr5_+_88314719_88314719	0.324768	FOX{I1,J2}.p2	EF113909|Odam|69592|odontogenic, ameloblast asssociated	NM_027128|Odam|69592|odontogenic, ameloblast asssociated
mm9_v1_chr4_-_134081867_134082196	0.323713	FOX{I1,J2}.p2	AK196748|Fam54b|76824|family with sequence similarity 54, member B	AK205711|Fam54b|76824|family with sequence similarity 54, member B	AK194688|Fam54b|76824|family with sequence similarity 54, member B
mm9_v1_chr19_-_55291933_55291946	0.323276	FOX{I1,J2}.p2	AK049940|Gucy2g|73707|guanylate cyclase 2g
mm9_v1_chr13_-_27702427_27702450	0.321627	FOX{I1,J2}.p2	BC116772|Prl7b1|75596|prolactin family 7, subfamily b, member 1	BC119183|Prl7b1|75596|prolactin family 7, subfamily b, member 1	AF525156|Prl7b1|75596|prolactin family 7, subfamily b, member 1	AK005458|Prl7b1|75596|prolactin family 7, subfamily b, member 1	NM_029355|Prl7b1|75596|prolactin family 7, subfamily b, member 1
mm9_v1_chr11_-_68825972_68825998	0.321313	FOX{I1,J2}.p2	
mm9_v1_chr1_+_95031814_95031827	0.32031	FOX{I1,J2}.p2	AF027730|Agxt|11611|alanine-glyoxylate aminotransferase
mm9_v1_chr8_+_63471991_63472061	0.319922	FOX{I1,J2}.p2	AK173292|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AY850065|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	NM_175089|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AK077047|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AK045202|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC070443|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC157939|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC158009|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC172091|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1
mm9_v1_chrX_+_35542969_35543017	0.319501	FOX{I1,J2}.p2	NM_001079513|Zbtb33|56805|zinc finger and BTB domain containing 33	NM_020256|Zbtb33|56805|zinc finger and BTB domain containing 33	AK087417|Zbtb33|56805|zinc finger and BTB domain containing 33	AK089423|Zbtb33|56805|zinc finger and BTB domain containing 33	AF097416|Zbtb33|56805|zinc finger and BTB domain containing 33
mm9_v1_chr9_-_121748578_121748578	0.31888	FOX{I1,J2}.p2	NM_028384|Ccdc13|434446|coiled-coil domain containing 13
mm9_v1_chr12_-_101121613_101121712	0.318727	FOX{I1,J2}.p2	BC049109|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK035051|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK011836|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK011507|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	NM_030172|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene	AK132473|2610021K21Rik|78767|RIKEN cDNA 2610021K21 gene
mm9_v1_chr1_+_129625987_129626062	0.31787	FOX{I1,J2}.p2	AK143962|Acmsd|266645|amino carboxymuconate semialdehyde decarboxylase	NM_001033041|Acmsd|266645|amino carboxymuconate semialdehyde decarboxylase	BC139281|Acmsd|266645|amino carboxymuconate semialdehyde decarboxylase	AB071419|Acmsd|266645|amino carboxymuconate semialdehyde decarboxylase
mm9_v1_chr17_-_5418711_5418766	0.31636	FOX{I1,J2}.p2	AK077089|Ldhal6b|106557|lactate dehydrogenase A-like 6B	BC061193|Ldhal6b|106557|lactate dehydrogenase A-like 6B	AY280363|Ldhal6b|106557|lactate dehydrogenase A-like 6B	NM_175349|Ldhal6b|106557|lactate dehydrogenase A-like 6B
mm9_v1_chr10_+_60880719_60880719	0.315072	FOX{I1,J2}.p2	NM_013611|Nodal|18119|nodal	X70514|Nodal|18119|nodal
mm9_v1_chr7_-_13007839_13007937	0.31429	FOX{I1,J2}.p2	AK137311|Zfp551|619331|zinc fingr protein 551	NM_001033820|Zfp551|619331|zinc fingr protein 551	BC141160|Zfp551|619331|zinc fingr protein 551	BC145466|Zfp551|619331|zinc fingr protein 551
mm9_v1_chr14_-_66696533_66696571	0.313652	FOX{I1,J2}.p2	AK161261|Adam2|11495|a disintegrin and metallopeptidase domain 2	AK161266|Adam2|11495|a disintegrin and metallopeptidase domain 2	U16242|Adam2|11495|a disintegrin and metallopeptidase domain 2	AK016550|Adam2|11495|a disintegrin and metallopeptidase domain 2	NM_009618|Adam2|11495|a disintegrin and metallopeptidase domain 2	U38806|Adam2|11495|a disintegrin and metallopeptidase domain 2
mm9_v1_chr2_-_164063997_164064076	0.313365	FOX{I1,J2}.p2	AK090151|Svs2|53878|seminal vesicle secretory protein 2	AK144524|Svs2|53878|seminal vesicle secretory protein 2	AK165727|Svs2|53878|seminal vesicle secretory protein 2	AK136679|Svs2|53878|seminal vesicle secretory protein 2	AK035204|Svs2|53878|seminal vesicle secretory protein 2	AK040724|Svs2|53878|seminal vesicle secretory protein 2	AK090302|Svs2|53878|seminal vesicle secretory protein 2	AK144285|Svs2|53878|seminal vesicle secretory protein 2	AK144389|Svs2|53878|seminal vesicle secretory protein 2	AK144429|Svs2|53878|seminal vesicle secretory protein 2	AK165704|Svs2|53878|seminal vesicle secretory protein 2	AK165713|Svs2|53878|seminal vesicle secretory protein 2	AK165753|Svs2|53878|seminal vesicle secretory protein 2	AK165825|Svs2|53878|seminal vesicle secretory protein 2	BC107275|Svs2|53878|seminal vesicle secretory protein 2	BC107276|Svs2|53878|seminal vesicle secretory protein 2	NM_017390|Svs2|53878|seminal vesicle secretory protein 2
mm9_v1_chr10_-_80129430_80129498	0.312952	FOX{I1,J2}.p2	AK194912|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK189980|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK196822|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK202566|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2	AK204946|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr5_+_104728299_104728323	0.312788	FOX{I1,J2}.p2	NM_008318|Ibsp|15891|integrin binding sialoprotein	AK132371|Ibsp|15891|integrin binding sialoprotein	L23801|Ibsp|15891|integrin binding sialoprotein	BC045143|Ibsp|15891|integrin binding sialoprotein	AK162640|Ibsp|15891|integrin binding sialoprotein	L20232|Ibsp|15891|integrin binding sialoprotein
mm9_v1_chr4_+_141302635_141302765	0.312075	FOX{I1,J2}.p2	AK017155|Agmat|75986|agmatine ureohydrolase (agmatinase)	BC115693|Agmat|75986|agmatine ureohydrolase (agmatinase)
mm9_v1_chr2_-_77118632_77118710	0.312039	FOX{I1,J2}.p2	BC013245|Sestd1|228071|SEC14 and spectrin domains 1	AK047939|Sestd1|228071|SEC14 and spectrin domains 1	BC044853|Sestd1|228071|SEC14 and spectrin domains 1	NM_175465|Sestd1|228071|SEC14 and spectrin domains 1
mm9_v1_chr7_-_5068497_5068512	0.310116	FOX{I1,J2}.p2	AY070253|Rfpl4|192658|ret finger protein-like 4	BC069834|Rfpl4|192658|ret finger protein-like 4	AK136022|Rfpl4|192658|ret finger protein-like 4	AK139569|Rfpl4|192658|ret finger protein-like 4	NM_001145013|Rfpl4|192658|ret finger protein-like 4	NM_138954|Rfpl4|192658|ret finger protein-like 4
mm9_v1_chr7_+_104599843_104599843	0.309386	FOX{I1,J2}.p2	NM_001136235|Kctd14|233529|potassium channel tetramerisation domain containing 14
mm9_v1_chr9_-_55131378_55131431	0.308047	FOX{I1,J2}.p2	AK041077|Nrg4|83961|neuregulin 4	AK080161|Nrg4|83961|neuregulin 4	BC034839|Nrg4|83961|neuregulin 4	AK080058|Nrg4|83961|neuregulin 4	AK080089|Nrg4|83961|neuregulin 4	NM_032002|Nrg4|83961|neuregulin 4
mm9_v1_chr9_-_119977358_119977413	0.307607	FOX{I1,J2}.p2	BC012653|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK035902|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK140010|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AF102269|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	NM_009987|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK045634|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK137388|Cx3cr1|13051|chemokine (C-X3-C) receptor 1	AK044557|Cx3cr1|13051|chemokine (C-X3-C) receptor 1
mm9_v1_chr2_+_164286735_164286813	0.305118	FOX{I1,J2}.p2	BC061084|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK032098|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	BC053943|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)	AK017524|Sys1|66460|SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae)
mm9_v1_chr15_-_97536204_97536244	0.30481	FOX{I1,J2}.p2	AK169097|Rpap3|71919|RNA polymerase II associated protein 3
mm9_v1_chr2_+_30006546_30006566	0.303271	FOX{I1,J2}.p2	AK011204|Tbc1d13|70296|TBC1 domain family, member 13
mm9_v1_chr7_+_24416996_24417006	0.302825	FOX{I1,J2}.p2	AF324871|Vmn1r171|81012|vomeronasal 1 receptor 171	BC111911|Vmn1r171|81012|vomeronasal 1 receptor 171	NM_030737|Vmn1r171|81012|vomeronasal 1 receptor 171
mm9_v1_chr11_-_118025722_118025748	0.302789	FOX{I1,J2}.p2	AK210975|Cyth1|19157|cytohesin 1
mm9_v1_chr7_+_26404382_26404511	0.302451	FOX{I1,J2}.p2	AK021146|Atp5sl|66349|ATP5S-like	AK009150|Atp5sl|66349|ATP5S-like	AK002370|Atp5sl|66349|ATP5S-like	AK039669|Atp5sl|66349|ATP5S-like	NM_025504|Atp5sl|66349|ATP5S-like
mm9_v1_chr12_+_7984451_7984482	0.30231	FOX{I1,J2}.p2	BC100607|Apob|238055|apolipoprotein B	BC028880|Apob|238055|apolipoprotein B	BC038263|Apob|238055|apolipoprotein B	NM_009693|Apob|238055|apolipoprotein B
mm9_v1_chr1_+_174249713_174249834	0.301237	FOX{I1,J2}.p2	
mm9_v1_chr15_+_6395311_6395349	0.300579	FOX{I1,J2}.p2	BC011137|C9|12279|complement component 9	NM_013485|C9|12279|complement component 9
mm9_v1_chr10_-_63552994_63553028	0.300484	FOX{I1,J2}.p2	AK036366|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK163753|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035773|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035858|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK035882|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	NM_178678|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK032485|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3	AK036180|Lrrtm3|216028|leucine rich repeat transmembrane neuronal 3
mm9_v1_chr4_-_143870368_143870368	0.299437	FOX{I1,J2}.p2	BC052827|Pramel5|384077|preferentially expressed antigen in melanoma like 5	NM_001085418|Pramel5|384077|preferentially expressed antigen in melanoma like 5
mm9_v1_chr6_-_129976943_129976977	0.29925	FOX{I1,J2}.p2	BC116377|Klra6|16637|killer cell lectin-like receptor, subfamily A, member 6	BC116822|Klra19|93971|killer cell lectin-like receptor, subfamily A, member 19	BC116824|Klra19|93971|killer cell lectin-like receptor, subfamily A, member 19	NM_008464|Klra6|16637|killer cell lectin-like receptor, subfamily A, member 6	U10092|Klra6|16637|killer cell lectin-like receptor, subfamily A, member 6	AF288378|Klra19|93971|killer cell lectin-like receptor, subfamily A, member 19	NM_053154|Klra19|93971|killer cell lectin-like receptor, subfamily A, member 19
mm9_v1_chr8_+_24263742_24263871	0.298874	FOX{I1,J2}.p2	AK018683|Nkx6-3|74561|NK6 homeobox 3	NM_029002|Nkx6-3|74561|NK6 homeobox 3	AK147163|Nkx6-3|74561|NK6 homeobox 3	BC140994|Nkx6-3|74561|NK6 homeobox 3
mm9_v1_chr2_+_152106052_152106158	0.297148	FOX{I1,J2}.p2	AK042898|Csnk2a1|12995|casein kinase 2, alpha 1 polypeptide
mm9_v1_chr14_-_73785067_73785067	0.296665	FOX{I1,J2}.p2	AK005125|Itm2b|16432|integral membrane protein 2B	AK152731|Itm2b|16432|integral membrane protein 2B	AK159962|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr14_+_96280472_96280516	0.29651	FOX{I1,J2}.p2	BC049573|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene	AK014987|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene	NM_025733|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene	AK005846|4921530L21Rik|66732|RIKEN cDNA 4921530L21 gene
mm9_v1_chr13_-_104968472_104968556	0.296224	FOX{I1,J2}.p2	BC021756|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK084373|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK013956|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK167749|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK012141|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK010346|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK163342|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK149832|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_001093759|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_001093760|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_025879|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene
mm9_v1_chr2_-_91023974_91024055	0.295793	FOX{I1,J2}.p2	AY263980|Madd|228355|MAP-kinase activating death domain	AY263981|Madd|228355|MAP-kinase activating death domain	AY263982|Madd|228355|MAP-kinase activating death domain	AY263983|Madd|228355|MAP-kinase activating death domain	AY263984|Madd|228355|MAP-kinase activating death domain	AY263985|Madd|228355|MAP-kinase activating death domain	AY263986|Madd|228355|MAP-kinase activating death domain	AY263987|Madd|228355|MAP-kinase activating death domain	AY263988|Madd|228355|MAP-kinase activating death domain	AY263989|Madd|228355|MAP-kinase activating death domain	BC003255|Madd|228355|MAP-kinase activating death domain	NM_001177721|Madd|228355|MAP-kinase activating death domain	NM_001177722|Madd|228355|MAP-kinase activating death domain	NM_001177723|Madd|228355|MAP-kinase activating death domain	NM_001177724|Madd|228355|MAP-kinase activating death domain	NM_001177725|Madd|228355|MAP-kinase activating death domain	NM_001177726|Madd|228355|MAP-kinase activating death domain	NM_001177727|Madd|228355|MAP-kinase activating death domain	NM_001177728|Madd|228355|MAP-kinase activating death domain	NM_001177729|Madd|228355|MAP-kinase activating death domain
mm9_v1_chr17_+_18435244_18435244	0.295589	FOX{I1,J2}.p2	NM_001104542|Vmn2r93|627132|vomeronasal 2, receptor 93
mm9_v1_chr1_+_182499015_182499087	0.295564	FOX{I1,J2}.p2	AK135977|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK159433|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK166104|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	X14206|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK028042|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK146677|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK165158|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK169326|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK152360|Parp1|11545|poly (ADP-ribose) polymerase family, member 1
mm9_v1_chr2_+_5766079_5766079	0.294762	FOX{I1,J2}.p2	AK088222|Nudt5|53893|nudix (nucleoside diphosphate linked moiety X)-type motif 5	NM_016918|Nudt5|53893|nudix (nucleoside diphosphate linked moiety X)-type motif 5
mm9_v1_chr6_-_87759747_87759783	0.294715	FOX{I1,J2}.p2	NM_133717|Rab43|69834|RAB43, member RAS oncogene family	BC010248|Rab43|69834|RAB43, member RAS oncogene family
mm9_v1_chr6_-_145167481_145167570	0.294525	FOX{I1,J2}.p2	BC014700|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog	BC031623|Kras|16653|v-Ki-ras2 Kirsten rat sarcoma viral oncogene homolog
mm9_v1_chr18_+_65048630_65048682	0.294491	FOX{I1,J2}.p2	AK042621|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr3_+_82830071_82830096	0.29441	FOX{I1,J2}.p2	NM_001111048|Fga|14161|fibrinogen alpha chain	NM_010196|Fga|14161|fibrinogen alpha chain	AK146828|Fga|14161|fibrinogen alpha chain	BC005467|Fga|14161|fibrinogen alpha chain	BC024778|Fga|14161|fibrinogen alpha chain
mm9_v1_chr5_-_38952777_38952930	0.293545	FOX{I1,J2}.p2	BC119358|Wdr1|22388|WD repeat domain 1	BC125295|Wdr1|22388|WD repeat domain 1	AK165225|Wdr1|22388|WD repeat domain 1	AK165323|Wdr1|22388|WD repeat domain 1	AK167813|Wdr1|22388|WD repeat domain 1	AK151146|Wdr1|22388|WD repeat domain 1	AF020055|Wdr1|22388|WD repeat domain 1	NM_011715|Wdr1|22388|WD repeat domain 1	AK153338|Wdr1|22388|WD repeat domain 1	AK170379|Wdr1|22388|WD repeat domain 1	AK167241|Wdr1|22388|WD repeat domain 1	AK169893|Wdr1|22388|WD repeat domain 1	AK156300|Wdr1|22388|WD repeat domain 1	AK167275|Wdr1|22388|WD repeat domain 1	AK004858|Wdr1|22388|WD repeat domain 1	AK169835|Wdr1|22388|WD repeat domain 1	BC049117|Wdr1|22388|WD repeat domain 1
mm9_v1_chr7_-_125263314_125263384	0.293292	FOX{I1,J2}.p2	AK004228|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK012904|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1	AK005514|Arl6ip1|54208|ADP-ribosylation factor-like 6 interacting protein 1
mm9_v1_chr6_+_41901626_41901631	0.293154	FOX{I1,J2}.p2	NM_027832|Sval1|71578|seminal vesicle antigen-like 1	AK018661|Sval1|71578|seminal vesicle antigen-like 1	BC114422|Sval1|71578|seminal vesicle antigen-like 1
mm9_v1_chr4_+_148307218_148307293	0.292634	FOX{I1,J2}.p2	AK173341|Casz1|69743|castor homolog 1, zinc finger (Drosophila)	AK138981|Casz1|69743|castor homolog 1, zinc finger (Drosophila)
mm9_v1_chr14_-_60845511_60845640	0.29241	FOX{I1,J2}.p2	AK145818|BC010981|407830|cDNA sequence BC010981
mm9_v1_chr11_+_69906145_69906162	0.291281	FOX{I1,J2}.p2	BC011197|Asgr2|11890|asialoglycoprotein receptor 2	NM_007493|Asgr2|11890|asialoglycoprotein receptor 2
mm9_v1_chr11_-_102152310_102152512	0.290955	FOX{I1,J2}.p2	AK218190|Atxn7l3|217218|ataxin 7-like 3	AK053165|Atxn7l3|217218|ataxin 7-like 3
mm9_v1_chr1_+_173051791_173051791	0.290522	FOX{I1,J2}.p2	AK005804|1700009P17Rik|75472|RIKEN cDNA 1700009P17 gene	NM_001081275|1700009P17Rik|75472|RIKEN cDNA 1700009P17 gene
mm9_v1_chr4_+_108520389_108520516	0.289839	FOX{I1,J2}.p2	BC021493|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK003197|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	NM_029571|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK148185|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK150178|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)	AK156755|Kti12|100087|KTI12 homolog, chromatin associated (S. cerevisiae)
mm9_v1_chr19_-_5912757_5912865	0.289589	FOX{I1,J2}.p2	U10435|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK215194|Dpf2|19708|D4, zinc and double PHD fingers family 2	BC012709|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK138047|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144848|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK019051|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144106|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK004812|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK144954|Dpf2|19708|D4, zinc and double PHD fingers family 2	U43921|Dpf2|19708|D4, zinc and double PHD fingers family 2	AK145851|Dpf2|19708|D4, zinc and double PHD fingers family 2	NM_011262|Dpf2|19708|D4, zinc and double PHD fingers family 2
mm9_v1_chr15_+_76173936_76173991	0.289516	FOX{I1,J2}.p2	AK011288|Cyc1|66445|cytochrome c-1	NM_025567|Cyc1|66445|cytochrome c-1	AK151299|Cyc1|66445|cytochrome c-1	AK170272|Cyc1|66445|cytochrome c-1	BC005620|Cyc1|66445|cytochrome c-1	AK002815|Cyc1|66445|cytochrome c-1	BC082790|Cyc1|66445|cytochrome c-1
mm9_v1_chr3_+_51298674_51298675	0.288401	FOX{I1,J2}.p2	AK038231|Rab33b|19338|RAB33B, member of RAS oncogene family
mm9_v1_chr14_-_69151731_69151797	0.288342	FOX{I1,J2}.p2	AF013107|Adam7|11500|a disintegrin and metallopeptidase domain 7	AK136692|Adam7|11500|a disintegrin and metallopeptidase domain 7	NM_007402|Adam7|11500|a disintegrin and metallopeptidase domain 7	AK020312|Adam7|11500|a disintegrin and metallopeptidase domain 7
mm9_v1_chr6_+_86959829_86959929	0.288048	FOX{I1,J2}.p2	AK145558|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	NM_001170591|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	NM_020045|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AK081950|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AK002244|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AK003730|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AJ132616|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	BC018355|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AY335195|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
mm9_v1_chr4_-_33335457_33335484	0.287774	FOX{I1,J2}.p2	AK159693|Pnrc1|108767|proline-rich nuclear receptor coactivator 1	AK087995|Pnrc1|108767|proline-rich nuclear receptor coactivator 1	AK160284|Pnrc1|108767|proline-rich nuclear receptor coactivator 1
mm9_v1_chr5_-_99681835_99681949	0.286466	FOX{I1,J2}.p2	AK028756|Rasgef1b|320292|RasGEF domain family, member 1B	BC052726|Rasgef1b|320292|RasGEF domain family, member 1B	AK090085|Rasgef1b|320292|RasGEF domain family, member 1B	AK149812|Rasgef1b|320292|RasGEF domain family, member 1B	AY129963|Rasgef1b|320292|RasGEF domain family, member 1B	BC050858|Rasgef1b|320292|RasGEF domain family, member 1B	NM_145839|Rasgef1b|320292|RasGEF domain family, member 1B	NM_181318|Rasgef1b|320292|RasGEF domain family, member 1B
mm9_v1_chr5_-_69933835_69933870	0.285453	FOX{I1,J2}.p2	AK009405|Yipf7|75581|Yip1 domain family, member 7	BC089576|Yipf7|75581|Yip1 domain family, member 7	NM_023784|Yipf7|75581|Yip1 domain family, member 7
mm9_v1_chr12_-_104695432_104695432	0.284435	FOX{I1,J2}.p2	BC021795|Ifi27l2b|217845|interferon, alpha-inducible protein 27 like 2B	NM_145449|Ifi27l2b|217845|interferon, alpha-inducible protein 27 like 2B
mm9_v1_chr14_-_48038081_48038081	0.284428	FOX{I1,J2}.p2	AB076696|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	NM_001145949|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5	NM_144553|Dlgap5|218977|discs, large (Drosophila) homolog-associated protein 5
mm9_v1_chr7_-_149361909_149361909	0.283847	FOX{I1,J2}.p2	AK014785|Krtap5-2|71623|keratin associated protein 5-2	NM_027844|Krtap5-2|71623|keratin associated protein 5-2
mm9_v1_chr6_+_37480172_37480192	0.283476	FOX{I1,J2}.p2	BC018333|Akr1d1|208665|aldo-keto reductase family 1, member D1	NM_145364|Akr1d1|208665|aldo-keto reductase family 1, member D1
mm9_v1_chr14_-_58444986_58445016	0.28258	FOX{I1,J2}.p2	AK166171|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	BC117500|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	BC117501|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	AK089223|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	NM_198605|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene	AK158142|F630043A04Rik|219114|RIKEN cDNA F630043A04 gene
mm9_v1_chr1_+_173053280_173053294	0.282306	FOX{I1,J2}.p2	BC061017|1700009P17Rik|75472|RIKEN cDNA 1700009P17 gene
mm9_v1_chr2_-_80287349_80287399	0.281414	FOX{I1,J2}.p2	U88568|Frzb|20378|frizzled-related protein	BC016884|Frzb|20378|frizzled-related protein
mm9_v1_chr12_-_86682028_86682042	0.281172	FOX{I1,J2}.p2	
mm9_v1_chr19_+_45122281_45122364	0.280564	FOX{I1,J2}.p2	AK154274|Sfxn3|94280|sideroflexin 3	AF325262|Sfxn3|94280|sideroflexin 3	AK089985|Sfxn3|94280|sideroflexin 3	AK184595|Sfxn3|94280|sideroflexin 3	AK206211|Sfxn3|94280|sideroflexin 3	AK034514|Sfxn3|94280|sideroflexin 3
mm9_v1_chr9_+_18235058_18235097	0.280299	FOX{I1,J2}.p2	NM_144934|Mbd3l2|234988|methyl-CpG binding domain protein 3-like 2	AK135772|Mbd3l2|234988|methyl-CpG binding domain protein 3-like 2	BC064744|Mbd3l2|234988|methyl-CpG binding domain protein 3-like 2
mm9_v1_chr7_+_18557472_18557527	0.279524	FOX{I1,J2}.p2	AF221099|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11	AK004142|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11	AK005432|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11	AK005463|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11	NM_023289|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11	AK145847|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11	BC099452|Ceacam11|66996|carcinoembryonic antigen-related cell adhesion molecule 11
mm9_v1_chr19_+_21354915_21354945	0.278467	FOX{I1,J2}.p2	AK185148|Zfand5|22682|zinc finger, AN1-type domain 5
mm9_v1_chr2_+_32305976_32305976	0.277474	FOX{I1,J2}.p2	AK029812|Naif1|71254|nuclear apoptosis inducing factor 1	NM_194335|Naif1|71254|nuclear apoptosis inducing factor 1
mm9_v1_chr4_-_134409199_134409236	0.277414	FOX{I1,J2}.p2	BC042733|Tmem57|66146|transmembrane protein 57	BC044802|Tmem57|66146|transmembrane protein 57	BC037192|Tmem57|66146|transmembrane protein 57	BC019186|Tmem57|66146|transmembrane protein 57	AK020354|Tmem57|66146|transmembrane protein 57
mm9_v1_chr4_+_140857147_140857182	0.277241	FOX{I1,J2}.p2	AK137704|Epha2|13836|Eph receptor A2	AK144202|Epha2|13836|Eph receptor A2	NM_010139|Epha2|13836|Eph receptor A2	U07634|Epha2|13836|Eph receptor A2	BC140960|Epha2|13836|Eph receptor A2	X78339|Epha2|13836|Eph receptor A2
mm9_v1_chr6_-_148719426_148719561	0.276801	FOX{I1,J2}.p2	X67534|Ipo8|320727|importin 8
mm9_v1_chr8_+_55162885_55163132	0.276599	FOX{I1,J2}.p2	NM_009506|Vegfc|22341|vascular endothelial growth factor C	AK047844|Vegfc|22341|vascular endothelial growth factor C	U73620|Vegfc|22341|vascular endothelial growth factor C	BC096377|Vegfc|22341|vascular endothelial growth factor C	U58112|Vegfc|22341|vascular endothelial growth factor C	EU862554|Vegfc|22341|vascular endothelial growth factor C	EU862555|Vegfc|22341|vascular endothelial growth factor C
mm9_v1_chr2_+_164659268_164659347	0.275676	FOX{I1,J2}.p2	AK159150|Ctsa|19025|cathepsin A	AK032197|Ctsa|19025|cathepsin A	AK159766|Ctsa|19025|cathepsin A	BC018534|Ctsa|19025|cathepsin A
mm9_v1_chrX_-_151582391_151582391	0.275563	FOX{I1,J2}.p2	BC100353|1700042B14Rik|73347|RIKEN cDNA 1700042B14 gene	NM_001081671|1700042B14Rik|73347|RIKEN cDNA 1700042B14 gene
mm9_v1_chr12_+_89112519_89112519	0.275351	FOX{I1,J2}.p2	AK163212|Gm2016|100039042|predicted gene 2016	NM_001122662|Gm2016|100039042|predicted gene 2016
mm9_v1_chr5_+_77380762_77380839	0.275344	FOX{I1,J2}.p2	AK002669|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK079282|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK166264|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK013426|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK075949|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	AK010462|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	BC018153|Paics|67054|phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase
mm9_v1_chr8_+_108160437_108160479	0.274199	FOX{I1,J2}.p2	NM_181322|Ctcf|13018|CCCTC-binding factor	U51037|Ctcf|13018|CCCTC-binding factor	BC037456|Ctcf|13018|CCCTC-binding factor	AK140164|Ctcf|13018|CCCTC-binding factor	BC009129|Ctcf|13018|CCCTC-binding factor	BC024382|Ctcf|13018|CCCTC-binding factor	BC049131|Ctcf|13018|CCCTC-binding factor	AK076192|Ctcf|13018|CCCTC-binding factor
mm9_v1_chr3_+_88639149_88639197	0.274192	FOX{I1,J2}.p2	NM_027389|Gon4l|76022|gon-4-like (C.elegans)	AK147575|Gon4l|76022|gon-4-like (C.elegans)	BC037148|Gon4l|76022|gon-4-like (C.elegans)
mm9_v1_chr2_-_25316432_25316473	0.27391	FOX{I1,J2}.p2	AK046066|BC029214|227622|cDNA sequence BC029214
mm9_v1_chr9_+_53697970_53698042	0.272224	FOX{I1,J2}.p2	AK009809|Sln|66402|sarcolipin
mm9_v1_chr4_+_143157369_143157377	0.271647	FOX{I1,J2}.p2	NM_001007579|BC080695|329986|cDNA sequence BC080695	BC080695|BC080695|329986|cDNA sequence BC080695
mm9_v1_chr7_-_4474044_4474047	0.270178	FOX{I1,J2}.p2	AK169223|Tnni3|21954|troponin I, cardiac 3	BC061171|Tnni3|21954|troponin I, cardiac 3	NM_009406|Tnni3|21954|troponin I, cardiac 3
mm9_v1_chrX_-_98417753_98417901	0.270061	FOX{I1,J2}.p2	AK168604|Snx12|55988|sorting nexin 12	AK011257|Snx12|55988|sorting nexin 12	AK170403|Snx12|55988|sorting nexin 12	AK049561|Snx12|55988|sorting nexin 12	AK146833|Snx12|55988|sorting nexin 12	AF062484|Snx12|55988|sorting nexin 12	BC002009|Snx12|55988|sorting nexin 12	AK148235|Snx12|55988|sorting nexin 12	AK169569|Snx12|55988|sorting nexin 12	AK170992|Snx12|55988|sorting nexin 12	AK131838|Snx12|55988|sorting nexin 12	NM_001110310|Snx12|55988|sorting nexin 12	NM_001110311|Snx12|55988|sorting nexin 12	NM_018875|Snx12|55988|sorting nexin 12
mm9_v1_chr7_+_50890076_50890108	0.270056	FOX{I1,J2}.p2	AK008389|Ceacam18|72431|carcinoembryonic antigen-related cell adhesion molecule 18	BC042780|Ceacam18|72431|carcinoembryonic antigen-related cell adhesion molecule 18	NM_028236|Ceacam18|72431|carcinoembryonic antigen-related cell adhesion molecule 18
mm9_v1_chr11_+_71564204_71564204	0.26995	FOX{I1,J2}.p2	BC063070|Wscd1|216881|WSC domain containing 1	NM_177618|Wscd1|216881|WSC domain containing 1
mm9_v1_chr8_-_71613058_71613120	0.269922	FOX{I1,J2}.p2	BC027192|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	BC031146|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	NM_153054|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1
mm9_v1_chr15_-_74828317_74828336	0.268156	FOX{I1,J2}.p2	BC002070|Ly6a|110454|lymphocyte antigen 6 complex, locus A	NM_010738|Ly6a|110454|lymphocyte antigen 6 complex, locus A	X04653|Ly6a|110454|lymphocyte antigen 6 complex, locus A	J03636|Ly6a|110454|lymphocyte antigen 6 complex, locus A	AK076200|Ly6a|110454|lymphocyte antigen 6 complex, locus A
mm9_v1_chr6_+_90072636_90072636	0.267764	FOX{I1,J2}.p2	BC046308|Vmn1r51|22296|vomeronasal 1 receptor 51	NM_011683|Vmn1r51|22296|vomeronasal 1 receptor 51
mm9_v1_chr12_-_53072250_53072307	0.266481	FOX{I1,J2}.p2	AK047221|Heatr5a|320487|HEAT repeat containing 5A	AK080280|Heatr5a|320487|HEAT repeat containing 5A	AK053055|Heatr5a|320487|HEAT repeat containing 5A	NM_177171|Heatr5a|320487|HEAT repeat containing 5A
mm9_v1_chr8_+_114062242_114062242	0.266307	FOX{I1,J2}.p2	NM_001168623|Znrf1|170737|zinc and ring finger 1
mm9_v1_chr2_+_172073991_172073998	0.265583	FOX{I1,J2}.p2	AK038677|Mc3r|17201|melanocortin 3 receptor	NM_008561|Mc3r|17201|melanocortin 3 receptor	BC103669|Mc3r|17201|melanocortin 3 receptor	BC104730|Mc3r|17201|melanocortin 3 receptor	BC105667|Mc3r|17201|melanocortin 3 receptor	BC105668|Mc3r|17201|melanocortin 3 receptor
mm9_v1_chr11_+_87032504_87032509	0.265149	FOX{I1,J2}.p2	AK004018|Trim37|68729|tripartite motif-containing 37
mm9_v1_chr15_+_75098850_75098850	0.265047	FOX{I1,J2}.p2	NM_008530|Ly6f|17071|lymphocyte antigen 6 complex, locus F
mm9_v1_chr15_-_89026839_89026926	0.264705	FOX{I1,J2}.p2	BC030395|Fam116b|69440|family with sequence similarity 116, member B	BC139003|Fam116b|69440|family with sequence similarity 116, member B	AK084555|Fam116b|69440|family with sequence similarity 116, member B	NM_027081|Fam116b|69440|family with sequence similarity 116, member B	AK154949|Fam116b|69440|family with sequence similarity 116, member B
mm9_v1_chr2_+_49307005_49307084	0.264298	FOX{I1,J2}.p2	NM_172663|Epc2|227867|enhancer of polycomb homolog 2 (Drosophila)	AK031025|Epc2|227867|enhancer of polycomb homolog 2 (Drosophila)
mm9_v1_chr4_-_109125244_109125254	0.263724	FOX{I1,J2}.p2	AK139182|Rnf11|29864|ring finger protein 11
mm9_v1_chr2_+_25508637_25508639	0.262839	FOX{I1,J2}.p2	NM_033145|Lcn8|78076|lipocalin 8	BC048433|Lcn8|78076|lipocalin 8
mm9_v1_chr18_-_73975022_73975140	0.262253	FOX{I1,J2}.p2	BC004709|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	NM_145494|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK043103|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK171157|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK042289|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK039906|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK050933|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK050980|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK077746|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK156403|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK080403|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial	AK162126|Me2|107029|malic enzyme 2, NAD(+)-dependent, mitochondrial
mm9_v1_chr11_+_73883671_73883671	0.262205	FOX{I1,J2}.p2	BC083001|Zfp616|327963|zinc finger protein 616	NM_001177570|Zfp616|327963|zinc finger protein 616
mm9_v1_chr10_-_116813919_116814033	0.261545	FOX{I1,J2}.p2	AK048615|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK046856|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK168764|Cpsf6|432508|cleavage and polyadenylation specific factor 6	BC068133|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK049749|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK077684|Cpsf6|432508|cleavage and polyadenylation specific factor 6	NM_001013391|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr19_-_44144244_44144286	0.260712	FOX{I1,J2}.p2	AK145990|Erlin1|226144|ER lipid raft associated 1	NM_001164359|Erlin1|226144|ER lipid raft associated 1	NM_001164360|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr7_+_149387268_149387268	0.260388	FOX{I1,J2}.p2	AK020699|Krtap5-3|77215|keratin associated protein 5-3	NM_023860|Krtap5-3|77215|keratin associated protein 5-3
mm9_v1_chr18_+_37571327_37571327	0.259202	FOX{I1,J2}.p2	NM_053135|Pcdhb10|93881|protocadherin beta 10
mm9_v1_chr5_-_22056086_22056211	0.258827	FOX{I1,J2}.p2	AK166537|Orc5|26429|origin recognition complex, subunit 5	AK169683|Orc5|26429|origin recognition complex, subunit 5	AJ007360|Orc5|26429|origin recognition complex, subunit 5	AK144983|Orc5|26429|origin recognition complex, subunit 5	NM_011959|Orc5|26429|origin recognition complex, subunit 5	AK165912|Orc5|26429|origin recognition complex, subunit 5	BC006927|Orc5|26429|origin recognition complex, subunit 5	AK084683|Orc5|26429|origin recognition complex, subunit 5
mm9_v1_chr5_-_139960431_139960476	0.258107	FOX{I1,J2}.p2	NM_001159908|Zfand2a|100494|zinc finger, AN1-type domain 2A	NM_133349|Zfand2a|100494|zinc finger, AN1-type domain 2A
mm9_v1_chr4_-_119088052_119088125	0.257605	FOX{I1,J2}.p2	AK078362|Ccdc30|73332|coiled-coil domain containing 30	BC114436|Ccdc30|73332|coiled-coil domain containing 30	AK163185|Ccdc30|73332|coiled-coil domain containing 30	AK225009|Ccdc30|73332|coiled-coil domain containing 30	AK005616|Ccdc30|73332|coiled-coil domain containing 30	AK148014|Ccdc30|73332|coiled-coil domain containing 30	AK225018|Ccdc30|73332|coiled-coil domain containing 30	AK079015|Ccdc30|73332|coiled-coil domain containing 30	NM_029286|Ccdc30|73332|coiled-coil domain containing 30
mm9_v1_chr13_+_33753273_33753343	0.257453	FOX{I1,J2}.p2	AK136270|Serpinb6d|238568|serine (or cysteine) peptidase inhibitor, clade B, member 6d	NM_001076790|Serpinb6d|238568|serine (or cysteine) peptidase inhibitor, clade B, member 6d	BC147559|Serpinb6d|238568|serine (or cysteine) peptidase inhibitor, clade B, member 6d
mm9_v1_chr4_-_124370770_124370859	0.257065	FOX{I1,J2}.p2	BC043139|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK012550|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	NM_026031|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK147113|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	BC061074|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)	AK145266|Utp11l|67205|UTP11-like, U3 small nucleolar ribonucleoprotein, (yeast)
mm9_v1_chr11_-_51449228_51449289	0.256646	FOX{I1,J2}.p2	BC016075|Rmnd5b|66089|required for meiotic nuclear division 5 homolog B (S. cerevisiae)
mm9_v1_chr19_+_45122065_45122176	0.256517	FOX{I1,J2}.p2	NM_001178012|Sfxn3|94280|sideroflexin 3	NM_001178013|Sfxn3|94280|sideroflexin 3	NM_053197|Sfxn3|94280|sideroflexin 3	BC012208|Sfxn3|94280|sideroflexin 3
mm9_v1_chr18_-_39649499_39649545	0.254542	FOX{I1,J2}.p2	AK156323|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr2_-_148700920_148700989	0.254469	FOX{I1,J2}.p2	AK212642|Cst3|13010|cystatin C
mm9_v1_chr3_+_89866717_89866721	0.253928	FOX{I1,J2}.p2	AK007060|1700094D03Rik|73545|RIKEN cDNA 1700094D03 gene	NM_028567|1700094D03Rik|73545|RIKEN cDNA 1700094D03 gene	BC048560|1700094D03Rik|73545|RIKEN cDNA 1700094D03 gene
mm9_v1_chr14_-_28321630_28321694	0.251758	FOX{I1,J2}.p2	AK158666|Ccdc66|320234|coiled-coil domain containing 66	BC070471|Ccdc66|320234|coiled-coil domain containing 66	NM_177111|Ccdc66|320234|coiled-coil domain containing 66	AK145297|Ccdc66|320234|coiled-coil domain containing 66	AK170006|Ccdc66|320234|coiled-coil domain containing 66
mm9_v1_chr6_+_40443527_40443590	0.251607	FOX{I1,J2}.p2	BC116952|Tas2r108|57253|taste receptor, type 2, member 108	AY916507|Tas2r108|57253|taste receptor, type 2, member 108	NM_020502|Tas2r108|57253|taste receptor, type 2, member 108
mm9_v1_chr15_+_44455984_44456003	0.250915	FOX{I1,J2}.p2	AK004366|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9	AF076524|Ebag9|55960|estrogen receptor-binding fragment-associated gene 9
mm9_v1_chr5_-_138181225_138181225	0.250038	FOX{I1,J2}.p2	AB429289|6430598A04Rik|243300|RIKEN cDNA 6430598A04 gene	BC057372|6430598A04Rik|243300|RIKEN cDNA 6430598A04 gene	NM_175521|6430598A04Rik|243300|RIKEN cDNA 6430598A04 gene
mm9_v1_chrX_+_51834384_51834384	0.24968	FOX{I1,J2}.p2	BC108390|Gm16430|100040894|predicted gene 16430	NM_001166601|Gm16430|100040894|predicted gene 16430	NM_001166646|Gm16405|100040867|predicted gene 16405
mm9_v1_chr1_+_180179405_180179521	0.248582	FOX{I1,J2}.p2	AK213642|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr17_-_24211852_24211965	0.24846	FOX{I1,J2}.p2	AK079579|Pdpk1|18607|3-phosphoinositide dependent protein kinase 1
mm9_v1_chr2_-_164419070_164419093	0.248457	FOX{I1,J2}.p2	AK006296|Spinlw1|75526|serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin)	NM_029325|Spinlw1|75526|serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin)	AF346413|Spinlw1|75526|serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin)	BC048637|Spinlw1|75526|serine protease inhibitor-like, with Kunitz and WAP domains 1 (eppin)
mm9_v1_chr11_+_54683756_54683778	0.247923	FOX{I1,J2}.p2	
mm9_v1_chrX_-_109520387_109520387	0.246686	FOX{I1,J2}.p2	BC138009|Satl1|73809|spermidine/spermine N1-acetyl transferase-like 1	BC138011|Satl1|73809|spermidine/spermine N1-acetyl transferase-like 1	NM_028655|Satl1|73809|spermidine/spermine N1-acetyl transferase-like 1
mm9_v1_chr11_+_57332162_57332229	0.246183	FOX{I1,J2}.p2	AK076071|Mfap3|216760|microfibrillar-associated protein 3	NM_145426|Mfap3|216760|microfibrillar-associated protein 3	NM_180599|Mfap3|216760|microfibrillar-associated protein 3	AK042988|Mfap3|216760|microfibrillar-associated protein 3	AK080405|Mfap3|216760|microfibrillar-associated protein 3	AK155122|Mfap3|216760|microfibrillar-associated protein 3	BC006828|Mfap3|216760|microfibrillar-associated protein 3
mm9_v1_chr7_-_19751441_19751475	0.244838	FOX{I1,J2}.p2	AK050472|Gipr|381853|gastric inhibitory polypeptide receptor	AK146552|Gipr|381853|gastric inhibitory polypeptide receptor	NM_001080815|Gipr|381853|gastric inhibitory polypeptide receptor
mm9_v1_chr19_-_32182638_32182709	0.244718	FOX{I1,J2}.p2	AB037111|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK080951|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK041937|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK047692|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK046540|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK166100|Asah2|54447|N-acylsphingosine amidohydrolase 2	AK034493|Asah2|54447|N-acylsphingosine amidohydrolase 2
mm9_v1_chr18_+_56559977_56560028	0.244284	FOX{I1,J2}.p2	AK018551|Gramd3|107022|GRAM domain containing 3	BC057978|Gramd3|107022|GRAM domain containing 3
mm9_v1_chr7_-_112730004_112730048	0.244178	FOX{I1,J2}.p2	AK144340|Apbb1|11785|amyloid beta (A4) precursor protein-binding, family B, member 1	AK030748|Apbb1|11785|amyloid beta (A4) precursor protein-binding, family B, member 1	NM_009685|Apbb1|11785|amyloid beta (A4) precursor protein-binding, family B, member 1
mm9_v1_chr5_-_17341713_17341713	0.24361	FOX{I1,J2}.p2	NM_001159555|Cd36|12491|CD36 antigen	NM_007643|Cd36|12491|CD36 antigen
mm9_v1_chr4_+_102664399_102664426	0.243187	FOX{I1,J2}.p2	NM_001163768|Tctex1d1|67344|Tctex1 domain containing 1	AK040270|Tctex1d1|67344|Tctex1 domain containing 1
mm9_v1_chr11_+_19824835_19824933	0.243121	FOX{I1,J2}.p2	AB063496|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr13_-_101603253_101603421	0.24191	FOX{I1,J2}.p2	AF461761|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	BC033452|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	AK090176|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	AK088004|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	AK051183|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5	NM_022885|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5
mm9_v1_chrX_+_51925387_51925387	0.241652	FOX{I1,J2}.p2	BC108390|Gm16430|100040894|predicted gene 16430	NM_001166601|Gm16430|100040894|predicted gene 16430	NM_001166646|Gm16405|100040867|predicted gene 16405
mm9_v1_chr10_+_126500607_126500768	0.241643	FOX{I1,J2}.p2	BC046336|Cdk4|12567|cyclin-dependent kinase 4	NM_009870|Cdk4|12567|cyclin-dependent kinase 4	AK153465|Cdk4|12567|cyclin-dependent kinase 4	BC052694|Cdk4|12567|cyclin-dependent kinase 4	BC031599|Cdk4|12567|cyclin-dependent kinase 4	AK011871|Cdk4|12567|cyclin-dependent kinase 4	AK003804|Cdk4|12567|cyclin-dependent kinase 4	AK006918|Cdk4|12567|cyclin-dependent kinase 4	AK012064|Cdk4|12567|cyclin-dependent kinase 4	AK146107|Cdk4|12567|cyclin-dependent kinase 4	AK019380|Cdk4|12567|cyclin-dependent kinase 4	AK078440|Cdk4|12567|cyclin-dependent kinase 4	AK013400|Cdk4|12567|cyclin-dependent kinase 4	AK185090|Cdk4|12567|cyclin-dependent kinase 4
mm9_v1_chr16_+_90738690_90738714	0.241582	FOX{I1,J2}.p2	AK158113|Mrap|77037|melanocortin 2 receptor accessory protein	BC027543|Mrap|77037|melanocortin 2 receptor accessory protein
mm9_v1_chr11_-_6344354_6344443	0.241326	FOX{I1,J2}.p2	BC028539|H2afv|77605|H2A histone family, member V	AK021267|H2afv|77605|H2A histone family, member V	AK168110|H2afv|77605|H2A histone family, member V	BC147293|H2afv|77605|H2A histone family, member V	BC147294|H2afv|77605|H2A histone family, member V	BC147741|H2afv|77605|H2A histone family, member V	BC147751|H2afv|77605|H2A histone family, member V
mm9_v1_chr3_+_84756090_84756352	0.24126	FOX{I1,J2}.p2	AF391192|Fbxw7|50754|F-box and WD-40 domain protein 7	NM_080428|Fbxw7|50754|F-box and WD-40 domain protein 7	AF427101|Fbxw7|50754|F-box and WD-40 domain protein 7	BC131648|Fbxw7|50754|F-box and WD-40 domain protein 7	AB221593|Fbxw7|50754|F-box and WD-40 domain protein 7
mm9_v1_chr11_-_95973271_95973275	0.241024	FOX{I1,J2}.p2	AK166939|Calcoco2|76815|calcium binding and coiled-coil domain 2	AF490344|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK010816|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK145542|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK166710|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK166756|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK167009|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK167172|Calcoco2|76815|calcium binding and coiled-coil domain 2	AK167291|Calcoco2|76815|calcium binding and coiled-coil domain 2	NM_001100177|Calcoco2|76815|calcium binding and coiled-coil domain 2	NM_029755|Calcoco2|76815|calcium binding and coiled-coil domain 2
mm9_v1_chr12_-_57637894_57637894	0.240911	FOX{I1,J2}.p2	BC057607|Nkx2-1|21869|NK2 homeobox 1	NM_009385|Nkx2-1|21869|NK2 homeobox 1
mm9_v1_chr3_-_95085544_95085726	0.240839	FOX{I1,J2}.p2	AF051908|Prune|229589|prune homolog (Drosophila)	AK142160|Prune|229589|prune homolog (Drosophila)	AK081637|Prune|229589|prune homolog (Drosophila)	AK020342|Prune|229589|prune homolog (Drosophila)	BC058635|Prune|229589|prune homolog (Drosophila)
mm9_v1_chr1_+_182499091_182499136	0.240387	FOX{I1,J2}.p2	AK030889|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK088679|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	BC012041|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	NM_007415|Parp1|11545|poly (ADP-ribose) polymerase family, member 1	AK167699|Parp1|11545|poly (ADP-ribose) polymerase family, member 1
mm9_v1_chrX_-_104035877_104035981	0.240052	FOX{I1,J2}.p2	AK084983|Zcchc5|213436|zinc finger, CCHC domain containing 5	BC064821|Zcchc5|213436|zinc finger, CCHC domain containing 5	NM_199468|Zcchc5|213436|zinc finger, CCHC domain containing 5
mm9_v1_chr4_-_150026205_150026286	0.237879	FOX{I1,J2}.p2	AK134677|Slc45a1|242773|solute carrier family 45, member 1	BC051188|Slc45a1|242773|solute carrier family 45, member 1	AK134683|Slc45a1|242773|solute carrier family 45, member 1	AK158002|Slc45a1|242773|solute carrier family 45, member 1	AK082651|Slc45a1|242773|solute carrier family 45, member 1	NM_173774|Slc45a1|242773|solute carrier family 45, member 1
mm9_v1_chr14_-_55272452_55272539	0.237433	FOX{I1,J2}.p2	AF124725|Acin1|56215|apoptotic chromatin condensation inducer 1	AF124729|Acin1|56215|apoptotic chromatin condensation inducer 1	BC019127|Acin1|56215|apoptotic chromatin condensation inducer 1	BC094217|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_019567|Acin1|56215|apoptotic chromatin condensation inducer 1	AK012099|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_001085472|Acin1|56215|apoptotic chromatin condensation inducer 1
mm9_v1_chr16_+_37580303_37580398	0.237198	FOX{I1,J2}.p2	BC024369|Hgd|15233|homogentisate 1, 2-dioxygenase	BC037628|Hgd|15233|homogentisate 1, 2-dioxygenase	AK050193|Hgd|15233|homogentisate 1, 2-dioxygenase	BC044758|Hgd|15233|homogentisate 1, 2-dioxygenase	AK002584|Hgd|15233|homogentisate 1, 2-dioxygenase
mm9_v1_chr13_-_70776511_70776699	0.23716	FOX{I1,J2}.p2	AK143610|BC018507|218333|cDNA sequence BC018507	NM_144837|BC018507|218333|cDNA sequence BC018507
mm9_v1_chr4_+_101927543_101927649	0.237004	FOX{I1,J2}.p2	NM_019840|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AF208023|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AJ297397|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AK031977|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr18_+_34701966_34701981	0.236653	FOX{I1,J2}.p2	Z68889|Wnt8a|20890|wingless-related MMTV integration site 8A	BC119212|Wnt8a|20890|wingless-related MMTV integration site 8A	BC120517|Wnt8a|20890|wingless-related MMTV integration site 8A	NM_009290|Wnt8a|20890|wingless-related MMTV integration site 8A
mm9_v1_chr17_-_80689815_80689815	0.23649	FOX{I1,J2}.p2	BC062952|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	NM_001163759|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57	NM_198942|Dhx57|106794|DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
mm9_v1_chr9_-_44611033_44611045	0.234164	FOX{I1,J2}.p2	BC024432|Ttc36|192653|tetratricopeptide repeat domain 36	NM_138951|Ttc36|192653|tetratricopeptide repeat domain 36	BC021613|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr2_+_152495196_152495240	0.233891	FOX{I1,J2}.p2	NM_001159551|H13|14950|histocompatibility 13	NM_001159552|H13|14950|histocompatibility 13	NM_001159553|H13|14950|histocompatibility 13	NM_010376|H13|14950|histocompatibility 13	AJ345032|H13|14950|histocompatibility 13	BC056977|H13|14950|histocompatibility 13	DQ168449|H13|14950|histocompatibility 13	AK012600|H13|14950|histocompatibility 13	AK007664|H13|14950|histocompatibility 13	AK004690|H13|14950|histocompatibility 13	AK019877|H13|14950|histocompatibility 13	AK039008|H13|14950|histocompatibility 13	AK049101|H13|14950|histocompatibility 13	AK159176|H13|14950|histocompatibility 13	AK028109|H13|14950|histocompatibility 13	AF483214|H13|14950|histocompatibility 13	AK080966|H13|14950|histocompatibility 13	AK169922|H13|14950|histocompatibility 13
mm9_v1_chr8_-_46380165_46380188	0.232785	FOX{I1,J2}.p2	NM_008455|Klkb1|16621|kallikrein B, plasma 1
mm9_v1_chrX_+_52480052_52480052	0.231858	FOX{I1,J2}.p2	AK015913|Slxl1|75140|Slx-like 1	NM_029181|Slxl1|75140|Slx-like 1
mm9_v1_chr17_+_42452895_42453084	0.229817	FOX{I1,J2}.p2	NM_028474|3110082D06Rik|627626|RIKEN cDNA 3110082D06 gene	AK014270|3110082D06Rik|627626|RIKEN cDNA 3110082D06 gene	BC145294|3110082D06Rik|627626|RIKEN cDNA 3110082D06 gene
mm9_v1_chrX_+_109608882_109608925	0.229705	FOX{I1,J2}.p2	AK017156|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	NM_001168590|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	NM_026333|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	AK008319|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	BC139480|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene	BC139481|2010106E10Rik|67715|RIKEN cDNA 2010106E10 gene
mm9_v1_chr5_-_54098762_54098942	0.229351	FOX{I1,J2}.p2	BC020534|Cckar|12425|cholecystokinin A receptor	AK143895|Cckar|12425|cholecystokinin A receptor	AK004730|Cckar|12425|cholecystokinin A receptor	AK146738|Cckar|12425|cholecystokinin A receptor	AK147052|Cckar|12425|cholecystokinin A receptor	NM_009827|Cckar|12425|cholecystokinin A receptor
mm9_v1_chr8_-_46347384_46347394	0.228668	FOX{I1,J2}.p2	AK005546|F11|109821|coagulation factor XI	NM_028066|F11|109821|coagulation factor XI
mm9_v1_chr7_-_5364746_5364746	0.228227	FOX{I1,J2}.p2	AF324869|Vmn1r58|81014|vomeronasal 1 receptor 58	NM_030739|Vmn1r58|81014|vomeronasal 1 receptor 58
mm9_v1_chr6_-_49214015_49214054	0.227794	FOX{I1,J2}.p2	AK170599|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK076230|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK089980|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK171708|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK005187|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	NM_198102|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK148552|Tra2a|101214|transformer 2 alpha homolog (Drosophila)
mm9_v1_chr5_-_34517234_34517339	0.227707	FOX{I1,J2}.p2	AK013062|Mxd4|17122|Max dimerization protein 4
mm9_v1_chr1_-_162133574_162133640	0.224501	FOX{I1,J2}.p2	AK164472|Cacybp|12301|calcyclin binding protein
mm9_v1_chr2_-_90319326_90319330	0.224335	FOX{I1,J2}.p2	D83203|Ptprj|19271|protein tyrosine phosphatase, receptor type, J	NM_001135657|Ptprj|19271|protein tyrosine phosphatase, receptor type, J
mm9_v1_chr8_-_3694155_3694179	0.223697	FOX{I1,J2}.p2	M99371|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	AK080159|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	M34163|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	NM_013517|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	AK156654|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide	AK172591|Fcer2a|14128|Fc receptor, IgE, low affinity II, alpha polypeptide
mm9_v1_chr12_+_106429252_106429254	0.2235	FOX{I1,J2}.p2	AF195490|Tcl1b3|27378|T-cell leukemia/lymphoma 1B, 3	BC119260|Tcl1b3|27378|T-cell leukemia/lymphoma 1B, 3	BC120575|Tcl1b3|27378|T-cell leukemia/lymphoma 1B, 3	NM_013772|Tcl1b3|27378|T-cell leukemia/lymphoma 1B, 3
mm9_v1_chr4_-_94316806_94316834	0.222389	FOX{I1,J2}.p2	BC061228|Lrrc19|100061|leucine rich repeat containing 19	AK033594|Lrrc19|100061|leucine rich repeat containing 19	NM_175305|Lrrc19|100061|leucine rich repeat containing 19
mm9_v1_chr12_-_8546350_8546371	0.222036	FOX{I1,J2}.p2	AY795939|Slc7a15|328059|solute carrier family 7 (cationic amino acid transporter, y+ system), member 15	NM_001038660|Slc7a15|328059|solute carrier family 7 (cationic amino acid transporter, y+ system), member 15	AK008024|Slc7a15|328059|solute carrier family 7 (cationic amino acid transporter, y+ system), member 15
mm9_v1_chr9_+_57981881_57981881	0.221415	FOX{I1,J2}.p2	NM_001162476|Stra6|20897|stimulated by retinoic acid gene 6
mm9_v1_chr8_-_19892900_19893049	0.218774	FOX{I1,J2}.p2	AK036306|2610005L07Rik|381598|cadherin 11 pseudogene	AK135487|6820431F20Rik|547150|cadherin 11 pseudogene	BC064022|2610005L07Rik|381598|cadherin 11 pseudogene	AK033345|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK170069|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK083828|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK012880|2610005L07Rik|381598|cadherin 11 pseudogene	AK167066|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK132389|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene
mm9_v1_chr7_-_116875215_116875245	0.218446	FOX{I1,J2}.p2	AJ277605|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	AB046448|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	BC104347|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	BC104346|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)	NM_020051|Ascl3|56787|achaete-scute complex homolog 3 (Drosophila)
mm9_v1_chr2_+_90585682_90585813	0.218139	FOX{I1,J2}.p2	AK014018|Fnbp4|55935|formin binding protein 4	AK012167|Fnbp4|55935|formin binding protein 4	AK084018|Fnbp4|55935|formin binding protein 4	AK164543|Fnbp4|55935|formin binding protein 4
mm9_v1_chr4_-_135609279_135609318	0.21745	FOX{I1,J2}.p2	AK011211|Rpl11|67025|ribosomal protein L11	AK011800|Rpl11|67025|ribosomal protein L11	AK169053|Rpl11|67025|ribosomal protein L11	AK002998|Rpl11|67025|ribosomal protein L11	AK008422|Rpl11|67025|ribosomal protein L11	AK013923|Rpl11|67025|ribosomal protein L11	AK014593|Rpl11|67025|ribosomal protein L11	AK153486|Rpl11|67025|ribosomal protein L11	AK164445|Rpl11|67025|ribosomal protein L11	NM_025919|Rpl11|67025|ribosomal protein L11	AK088967|Rpl11|67025|ribosomal protein L11
mm9_v1_chr4_-_87452140_87452217	0.217057	FOX{I1,J2}.p2	AK147009|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK008707|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK019458|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_029931|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr7_-_107475377_107475426	0.21548	FOX{I1,J2}.p2	
mm9_v1_chr1_+_58504476_58504476	0.215463	FOX{I1,J2}.p2	BC065163|Nif3l1|65102|Ngg1 interacting factor 3-like 1 (S. pombe)	NM_022988|Nif3l1|65102|Ngg1 interacting factor 3-like 1 (S. pombe)
mm9_v1_chr6_-_106698941_106699030	0.215389	FOX{I1,J2}.p2	AK138923|Il5ra|16192|interleukin 5 receptor, alpha	D90205|Il5ra|16192|interleukin 5 receptor, alpha	NM_008370|Il5ra|16192|interleukin 5 receptor, alpha
mm9_v1_chr11_+_80242103_80242184	0.214154	FOX{I1,J2}.p2	AK145731|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	AK166950|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	NM_178616|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	AK168289|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	AK051738|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	AK076002|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	AK140773|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	AK167559|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	BC119136|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	BC119138|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	AK007547|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	BC090980|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	AK089942|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	AK136049|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	BC100595|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	BC090664|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	BC037590|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11	BC055457|Psmd11|69077|proteasome (prosome, macropain) 26S subunit, non-ATPase, 11
mm9_v1_chr6_-_38238095_38238171	0.213556	FOX{I1,J2}.p2	AK045178|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like
mm9_v1_chr2_+_119420031_119420077	0.212785	FOX{I1,J2}.p2	AK017100|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK147270|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK009929|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK006166|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK011848|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK170765|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK029148|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	BC026913|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK011393|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK017322|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK030275|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene
mm9_v1_chr9_+_53213390_53213402	0.212353	FOX{I1,J2}.p2	AK016083|4930550C14Rik|75311|RIKEN cDNA 4930550C14 gene	NM_029247|4930550C14Rik|75311|RIKEN cDNA 4930550C14 gene	BC115638|4930550C14Rik|75311|RIKEN cDNA 4930550C14 gene	BC115639|4930550C14Rik|75311|RIKEN cDNA 4930550C14 gene
mm9_v1_chrX_+_71137440_71137452	0.211947	FOX{I1,J2}.p2	AJ310753|Avpr2|12000|arginine vasopressin receptor 2	NM_019404|Avpr2|12000|arginine vasopressin receptor 2	BC104728|Avpr2|12000|arginine vasopressin receptor 2	BC104729|Avpr2|12000|arginine vasopressin receptor 2	BC104731|Avpr2|12000|arginine vasopressin receptor 2	BC105662|Avpr2|12000|arginine vasopressin receptor 2	BC107005|Avpr2|12000|arginine vasopressin receptor 2
mm9_v1_chr12_+_82046496_82046547	0.211768	FOX{I1,J2}.p2	AK002267|Srsf5|20384|serine/arginine-rich splicing factor 5	AK005552|Srsf5|20384|serine/arginine-rich splicing factor 5	AK007729|Srsf5|20384|serine/arginine-rich splicing factor 5	AK142009|Srsf5|20384|serine/arginine-rich splicing factor 5	AK146624|Srsf5|20384|serine/arginine-rich splicing factor 5	AK078065|Srsf5|20384|serine/arginine-rich splicing factor 5	BC082593|Srsf5|20384|serine/arginine-rich splicing factor 5	BC085267|Srsf5|20384|serine/arginine-rich splicing factor 5	BC038624|Srsf5|20384|serine/arginine-rich splicing factor 5
mm9_v1_chr8_+_24249481_24249576	0.211701	FOX{I1,J2}.p2	U73972|Ank1|11733|ankyrin 1, erythroid	BC061219|Ank1|11733|ankyrin 1, erythroid	AK134267|Ank1|11733|ankyrin 1, erythroid
mm9_v1_chr18_-_84255781_84255953	0.21121	FOX{I1,J2}.p2	BC040215|Tshz1|110796|teashirt zinc finger family member 1	AK220545|Tshz1|110796|teashirt zinc finger family member 1	AK152140|Tshz1|110796|teashirt zinc finger family member 1	NM_001081300|Tshz1|110796|teashirt zinc finger family member 1
mm9_v1_chr2_-_155878682_155878682	0.210034	FOX{I1,J2}.p2	NM_001136556|Fer1l4|74562|fer-1-like 4 (C. elegans)
mm9_v1_chr7_+_52003841_52004004	0.20964	FOX{I1,J2}.p2	AK150435|Vrk3|101568|vaccinia related kinase 3	AK171673|Vrk3|101568|vaccinia related kinase 3	BC024839|Vrk3|101568|vaccinia related kinase 3	NM_133945|Vrk3|101568|vaccinia related kinase 3	BC027129|Vrk3|101568|vaccinia related kinase 3
mm9_v1_chr11_-_86621130_86621161	0.209068	FOX{I1,J2}.p2	AK029935|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK010512|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_026191|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm9_v1_chr7_+_6204311_6204311	0.208833	FOX{I1,J2}.p2	AY226991|Gm6792|627821|predicted gene 6792	NM_001177416|Gm6792|627821|predicted gene 6792
mm9_v1_chr1_-_183074270_183074295	0.207598	FOX{I1,J2}.p2	BC031847|Nvl|67459|nuclear VCP-like	AK013982|Nvl|67459|nuclear VCP-like	AK018049|Nvl|67459|nuclear VCP-like	NM_026171|Nvl|67459|nuclear VCP-like
mm9_v1_chr1_+_108835529_108835558	0.206181	FOX{I1,J2}.p2	AK040697|Serpinb12|71869|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12	AK014669|Serpinb12|71869|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12	BC062134|Serpinb12|71869|serine (or cysteine) peptidase inhibitor, clade B (ovalbumin), member 12
mm9_v1_chr7_+_52872975_52872999	0.206151	FOX{I1,J2}.p2	AK137638|Fut1|14343|fucosyltransferase 1	NM_008051|Fut1|14343|fucosyltransferase 1	BC109145|Fut1|14343|fucosyltransferase 1	BC109146|Fut1|14343|fucosyltransferase 1
mm9_v1_chr7_+_126705221_126705245	0.20585	FOX{I1,J2}.p2	AK057650|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	NM_001177978|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	NM_146197|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	AK165353|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	AK143757|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	AK165401|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2	BC031140|Acsm2|233799|acyl-CoA synthetase medium-chain family member 2
mm9_v1_chr17_-_35971913_35971974	0.205453	FOX{I1,J2}.p2	AK188748|Tubb5|22154|tubulin, beta 5	AK196888|Tubb5|22154|tubulin, beta 5
mm9_v1_chr15_+_57747523_57747567	0.204234	FOX{I1,J2}.p2	AK084542|Wdr67|210544|WD repeat domain 67
mm9_v1_chr4_-_83132289_83132381	0.204007	FOX{I1,J2}.p2	BC043079|Psip1|101739|PC4 and SFRS1 interacting protein 1	NM_133948|Psip1|101739|PC4 and SFRS1 interacting protein 1	BC002104|Psip1|101739|PC4 and SFRS1 interacting protein 1	AK161426|Psip1|101739|PC4 and SFRS1 interacting protein 1	AK011572|Psip1|101739|PC4 and SFRS1 interacting protein 1	BC052177|Psip1|101739|PC4 and SFRS1 interacting protein 1
mm9_v1_chr7_-_108704315_108704409	0.20344	FOX{I1,J2}.p2	AF016462|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene	AF016464|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene	NM_007490|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene	X52991|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene	BC120753|Art2a-ps|11871|ADP-ribosyltransferase 2a, pseudogene
mm9_v1_chr5_+_115685856_115685859	0.203226	FOX{I1,J2}.p2	BC022670|Pop5|117109|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)	NM_026398|Pop5|117109|processing of precursor 5, ribonuclease P/MRP family (S. cerevisiae)
mm9_v1_chr11_-_103500187_103500193	0.203091	FOX{I1,J2}.p2	BC048617|Lyzl6|69444|lysozyme-like 6	NM_027083|Lyzl6|69444|lysozyme-like 6	AK006279|Lyzl6|69444|lysozyme-like 6
mm9_v1_chr15_+_99800504_99800504	0.201832	FOX{I1,J2}.p2	AK139636|Larp4|207214|La ribonucleoprotein domain family, member 4	NM_001080948|Larp4|207214|La ribonucleoprotein domain family, member 4
mm9_v1_chr8_+_23081067_23081067	0.201319	FOX{I1,J2}.p2	BC049553|Ccdc70|67929|coiled-coil domain containing 70	NM_026459|Ccdc70|67929|coiled-coil domain containing 70
mm9_v1_chr15_-_79763138_79763209	0.200921	FOX{I1,J2}.p2	BC042657|Cbx7|52609|chromobox homolog 7
mm9_v1_chr15_-_51823107_51823255	0.200879	FOX{I1,J2}.p2	AK004746|Rad21|19357|RAD21 homolog (S. pombe)	AK128984|Rad21|19357|RAD21 homolog (S. pombe)	AK168896|Rad21|19357|RAD21 homolog (S. pombe)
mm9_v1_chr7_-_4473916_4474040	0.200212	FOX{I1,J2}.p2	U09181|Tnni3|21954|troponin I, cardiac 3	BC100590|Tnni3|21954|troponin I, cardiac 3
mm9_v1_chr16_-_56690646_56690662	0.200027	FOX{I1,J2}.p2	
mm9_v1_chr17_-_23814399_23814413	0.199739	FOX{I1,J2}.p2	BC025860|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AF156164|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AK005382|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AK005530|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a
mm9_v1_chr2_+_119853216_119853248	0.199691	FOX{I1,J2}.p2	NM_001114637|Jmjd7|433466|jumonji domain containing 7	AB195274|Pla2g4b|211429|phospholipase A2, group IVB (cytosolic)	BC016255|Jmjd7|433466|jumonji domain containing 7
mm9_v1_chr1_+_162908733_162908776	0.198109	FOX{I1,J2}.p2	NM_080844|Serpinc1|11905|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1	BC019447|Serpinc1|11905|serine (or cysteine) peptidase inhibitor, clade C (antithrombin), member 1
mm9_v1_chr6_-_72849854_72850037	0.195916	FOX{I1,J2}.p2	NM_019715|Kcmf1|74287|potassium channel modulatory factor 1
mm9_v1_chr13_-_114408704_114408818	0.195905	FOX{I1,J2}.p2	AK052343|Snx18|170625|sorting nexin 18	BC137801|Snx18|170625|sorting nexin 18	BC145951|Snx18|170625|sorting nexin 18	AF408408|Snx18|170625|sorting nexin 18	AK155955|Snx18|170625|sorting nexin 18	AK143645|Snx18|170625|sorting nexin 18	BC063089|Snx18|170625|sorting nexin 18	NM_130796|Snx18|170625|sorting nexin 18
mm9_v1_chr9_+_110379481_110379600	0.195561	FOX{I1,J2}.p2	AK029776|Kif9|16578|kinesin family member 9	AK087008|Kif9|16578|kinesin family member 9	NM_001163569|Kif9|16578|kinesin family member 9	AJ132889|Kif9|16578|kinesin family member 9	BC115765|Kif9|16578|kinesin family member 9	AK029506|Kif9|16578|kinesin family member 9
mm9_v1_chr9_+_7464140_7464186	0.195322	FOX{I1,J2}.p2	AK049552|Mmp1a|83995|matrix metallopeptidase 1a (interstitial collagenase)	BC117756|Mmp1a|83995|matrix metallopeptidase 1a (interstitial collagenase)	NM_032006|Mmp1a|83995|matrix metallopeptidase 1a (interstitial collagenase)	AJ278462|Mmp1a|83995|matrix metallopeptidase 1a (interstitial collagenase)
mm9_v1_chr5_+_21291100_21291100	0.195288	FOX{I1,J2}.p2	AK076874|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2	NM_011188|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2
mm9_v1_chr11_-_51449370_51449402	0.194949	FOX{I1,J2}.p2	AK075599|Rmnd5b|66089|required for meiotic nuclear division 5 homolog B (S. cerevisiae)	NM_025346|Rmnd5b|66089|required for meiotic nuclear division 5 homolog B (S. cerevisiae)
mm9_v1_chr12_-_92828018_92828088	0.194484	FOX{I1,J2}.p2	AF250834|Gtf2a1|83602|general transcription factor II A, 1	BC079909|Gtf2a1|83602|general transcription factor II A, 1	AK139996|Gtf2a1|83602|general transcription factor II A, 1	NM_031391|Gtf2a1|83602|general transcription factor II A, 1
mm9_v1_chr13_-_98669545_98669547	0.193718	FOX{I1,J2}.p2	AK020332|Rgnef|110596|Rho-guanine nucleotide exchange factor
mm9_v1_chr1_+_179921565_179921641	0.192253	FOX{I1,J2}.p2	BC147679|Gm16432|545391|predicted gene 16432	BC147686|Gm16432|545391|predicted gene 16432	NM_001034899|Gm16432|545391|predicted gene 16432	AK029617|Gm16432|545391|predicted gene 16432	AK131684|Gm16432|545391|predicted gene 16432
mm9_v1_chr12_-_77278242_77278245	0.191144	FOX{I1,J2}.p2	AK054290|Esr2|13983|estrogen receptor 2 (beta)	AK054301|Esr2|13983|estrogen receptor 2 (beta)	AK054413|Esr2|13983|estrogen receptor 2 (beta)	NM_010157|Esr2|13983|estrogen receptor 2 (beta)	NM_207707|Esr2|13983|estrogen receptor 2 (beta)
mm9_v1_chr5_+_32761471_32761527	0.190959	FOX{I1,J2}.p2	AK171283|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK089067|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr5_+_33715497_33715611	0.19077	FOX{I1,J2}.p2	
mm9_v1_chr5_+_4192366_4192433	0.189865	FOX{I1,J2}.p2	AK016498|Gm9897|208595|predicted gene 9897	NM_001042670|Gm9897|208595|predicted gene 9897	BC094442|Mterf|545725|mitochondrial transcription termination factor	BC082778|Mterf|545725|mitochondrial transcription termination factor	BC028525|Gm9897|208595|predicted gene 9897	BC141337|Gm9897|208595|predicted gene 9897	AK020320|Gm9897|208595|predicted gene 9897	AY262005|Mterf|545725|mitochondrial transcription termination factor
mm9_v1_chr11_+_120459840_120459845	0.189694	FOX{I1,J2}.p2	NM_001038230|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr8_-_72411261_72411294	0.189486	FOX{I1,J2}.p2	BC006187|Cilp2|68709|cartilage intermediate layer protein 2	NM_026818|Cilp2|68709|cartilage intermediate layer protein 2
mm9_v1_chr11_-_69509498_69509599	0.187988	FOX{I1,J2}.p2	AK170297|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12	AK171014|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12	AK044387|BC096441|619441|cDNA sequence BC096441	NM_001034097|BC096441|619441|cDNA sequence BC096441	NM_001159503|BC096441|619441|cDNA sequence BC096441	NM_011614|Tnfsf12|21944|tumor necrosis factor (ligand) superfamily, member 12
mm9_v1_chr3_+_87710282_87710350	0.185737	FOX{I1,J2}.p2	AK017863|Hdgf|15191|hepatoma-derived growth factor	BC021654|Hdgf|15191|hepatoma-derived growth factor	BC005713|Hdgf|15191|hepatoma-derived growth factor	AF251787|Hdgf|15191|hepatoma-derived growth factor
mm9_v1_chr3_+_88968894_88969004	0.184487	FOX{I1,J2}.p2	AF033564|Clk2|12748|CDC-like kinase 2
mm9_v1_chr7_-_53965879_53966065	0.184167	FOX{I1,J2}.p2	BC019985|Saal1|78935|serum amyloid A-like 1	BC068127|Saal1|78935|serum amyloid A-like 1	AK019878|Saal1|78935|serum amyloid A-like 1	AK132193|Saal1|78935|serum amyloid A-like 1	NM_030233|Saal1|78935|serum amyloid A-like 1	AK030833|Saal1|78935|serum amyloid A-like 1	AK134418|Saal1|78935|serum amyloid A-like 1	AK033202|Saal1|78935|serum amyloid A-like 1	AK035874|Saal1|78935|serum amyloid A-like 1	BC087944|Saal1|78935|serum amyloid A-like 1
mm9_v1_chr17_-_87424652_87424745	0.183793	FOX{I1,J2}.p2	AK218842|Pigf|18701|phosphatidylinositol glycan anchor biosynthesis, class F	AK171083|Pigf|18701|phosphatidylinositol glycan anchor biosynthesis, class F	BC028862|Pigf|18701|phosphatidylinositol glycan anchor biosynthesis, class F	D50264|Pigf|18701|phosphatidylinositol glycan anchor biosynthesis, class F	NM_008838|Pigf|18701|phosphatidylinositol glycan anchor biosynthesis, class F	AK132796|Pigf|18701|phosphatidylinositol glycan anchor biosynthesis, class F
mm9_v1_chr9_-_31720846_31720869	0.183546	FOX{I1,J2}.p2	BC012684|Barx2|12023|BarH-like homeobox 2	NM_013800|Barx2|12023|BarH-like homeobox 2
mm9_v1_chr4_-_41045132_41045217	0.183125	FOX{I1,J2}.p2	AB019039|Aqp3|11828|aquaporin 3	BC027400|Aqp3|11828|aquaporin 3	AF104416|Aqp3|11828|aquaporin 3	AK145678|Aqp3|11828|aquaporin 3	AK160929|Aqp3|11828|aquaporin 3	NM_016689|Aqp3|11828|aquaporin 3
mm9_v1_chr3_+_69026340_69026379	0.182855	FOX{I1,J2}.p2	AK018621|Arl14|71619|ADP-ribosylation factor-like 14	NM_027843|Arl14|71619|ADP-ribosylation factor-like 14	BC104368|Arl14|71619|ADP-ribosylation factor-like 14	BC104369|Arl14|71619|ADP-ribosylation factor-like 14
mm9_v1_chr11_+_70514004_70514162	0.182683	FOX{I1,J2}.p2	AK029250|Kif1c|16562|kinesin family member 1C	NM_153103|Kif1c|16562|kinesin family member 1C	BC029286|Kif1c|16562|kinesin family member 1C	AK173007|Kif1c|16562|kinesin family member 1C
mm9_v1_chr8_-_71601126_71601131	0.181738	FOX{I1,J2}.p2	AK076433|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1	AK144034|Slc18a1|110877|solute carrier family 18 (vesicular monoamine), member 1
mm9_v1_chrX_+_21061748_21061785	0.181211	FOX{I1,J2}.p2	AK140941|Agtr2|11609|angiotensin II receptor, type 2	AK086334|Agtr2|11609|angiotensin II receptor, type 2	NM_007429|Agtr2|11609|angiotensin II receptor, type 2	L32840|Agtr2|11609|angiotensin II receptor, type 2	S67465|Agtr2|11609|angiotensin II receptor, type 2	U04828|Agtr2|11609|angiotensin II receptor, type 2
mm9_v1_chr1_-_74982118_74982188	0.180937	FOX{I1,J2}.p2	BC150939|Ccdc108|241116|coiled-coil domain containing 108	AK038623|Ccdc108|241116|coiled-coil domain containing 108	AK046272|Ccdc108|241116|coiled-coil domain containing 108	AK133278|Ccdc108|241116|coiled-coil domain containing 108	NM_001039495|Ccdc108|241116|coiled-coil domain containing 108
mm9_v1_chr4_+_134066913_134066990	0.180714	FOX{I1,J2}.p2	NM_001081099|2610002D18Rik|69885|RIKEN cDNA 2610002D18 gene	BC138271|2610002D18Rik|69885|RIKEN cDNA 2610002D18 gene	AK011279|2610002D18Rik|69885|RIKEN cDNA 2610002D18 gene
mm9_v1_chr2_+_22924699_22924786	0.179525	FOX{I1,J2}.p2	BC084584|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr17_+_19051285_19051285	0.178505	FOX{I1,J2}.p2	NM_001104549|Vmn2r97|627367|vomeronasal 2, receptor 97
mm9_v1_chrX_+_159215702_159215711	0.178183	FOX{I1,J2}.p2	AK213484|Rbbp7|245688|retinoblastoma binding protein 7
mm9_v1_chr11_-_86398586_86398610	0.177873	FOX{I1,J2}.p2	AK219497|Tmem49|75909|transmembrane protein 49	AK180953|Tmem49|75909|transmembrane protein 49
mm9_v1_chr15_-_89306531_89306619	0.176785	FOX{I1,J2}.p2	BC011284|Arsa|11883|arylsulfatase A	AK029854|Arsa|11883|arylsulfatase A	AK165921|Arsa|11883|arylsulfatase A	AK004540|Arsa|11883|arylsulfatase A	AK132501|Arsa|11883|arylsulfatase A
mm9_v1_chr18_-_38157190_38157227	0.176449	FOX{I1,J2}.p2	AK053122|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	BC068145|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	AK220486|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	NM_139206|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
mm9_v1_chr4_-_134409044_134409108	0.175974	FOX{I1,J2}.p2	AY364165|Tmem57|66146|transmembrane protein 57	BC054355|Tmem57|66146|transmembrane protein 57	BC010714|Tmem57|66146|transmembrane protein 57
mm9_v1_chr1_+_152239957_152239972	0.175541	FOX{I1,J2}.p2	AK076012|Tpr|108989|translocated promoter region	NM_133780|Tpr|108989|translocated promoter region
mm9_v1_chr3_-_115955629_115955694	0.175393	FOX{I1,J2}.p2	BC157981|Gpr88|64378|G-protein coupled receptor 88	BC051941|Gpr88|64378|G-protein coupled receptor 88
mm9_v1_chr10_+_79389816_79389883	0.174994	FOX{I1,J2}.p2	AK154956|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)	NM_007880|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)	BC050925|Arid3a|13496|AT rich interactive domain 3A (BRIGHT-like)
mm9_v1_chr12_+_77356412_77356500	0.17409	FOX{I1,J2}.p2	AK088700|Mthfd1|108156|methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase	AF364579|Mthfd1|108156|methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase	AK180541|Mthfd1|108156|methylenetetrahydrofolate dehydrogenase (NADP+ dependent), methenyltetrahydrofolate cyclohydrolase, formyltetrahydrofolate synthase
mm9_v1_chr8_-_28313004_28313018	0.173773	FOX{I1,J2}.p2	AK006984|Got1l1|76615|glutamic-oxaloacetic transaminase 1-like 1	BC052754|Got1l1|76615|glutamic-oxaloacetic transaminase 1-like 1	NM_029674|Got1l1|76615|glutamic-oxaloacetic transaminase 1-like 1
mm9_v1_chr9_+_74696269_74696406	0.17318	FOX{I1,J2}.p2	AK050237|Onecut1|15379|one cut domain, family member 1	AK051235|Onecut1|15379|one cut domain, family member 1	BC023444|Onecut1|15379|one cut domain, family member 1
mm9_v1_chr6_+_35202653_35202668	0.172892	FOX{I1,J2}.p2	AK082166|1810058I24Rik|67705|RIKEN cDNA 1810058I24 gene
mm9_v1_chr11_-_59850365_59850382	0.172873	FOX{I1,J2}.p2	AY334571|Pemt|18618|phosphatidylethanolamine N-methyltransferase
mm9_v1_chr1_+_24685556_24685610	0.172083	FOX{I1,J2}.p2	BC025579|Lmbrd1|68421|LMBR1 domain containing 1	BC031902|Lmbrd1|68421|LMBR1 domain containing 1	AK167080|Lmbrd1|68421|LMBR1 domain containing 1	AK152170|Lmbrd1|68421|LMBR1 domain containing 1	AK153237|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr3_-_102586596_102586636	0.17076	FOX{I1,J2}.p2	M35719|Tshb|22094|thyroid stimulating hormone, beta subunit	M35720|Tshb|22094|thyroid stimulating hormone, beta subunit	M35721|Tshb|22094|thyroid stimulating hormone, beta subunit	M35723|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_001165939|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_001165940|Tshb|22094|thyroid stimulating hormone, beta subunit	NM_009432|Tshb|22094|thyroid stimulating hormone, beta subunit
mm9_v1_chr3_+_138190223_138190257	0.170546	FOX{I1,J2}.p2	AK167097|Eif4e|13684|eukaryotic translation initiation factor 4E	M61731|Eif4e|13684|eukaryotic translation initiation factor 4E	AK082867|Eif4e|13684|eukaryotic translation initiation factor 4E	AK146757|Eif4e|13684|eukaryotic translation initiation factor 4E	BC010759|Eif4e|13684|eukaryotic translation initiation factor 4E	BC085087|Eif4e|13684|eukaryotic translation initiation factor 4E
mm9_v1_chr15_+_97794629_97794751	0.169872	FOX{I1,J2}.p2	AK134684|Tmem106c|380967|transmembrane protein 106C	BC046621|Tmem106c|380967|transmembrane protein 106C	NM_201359|Tmem106c|380967|transmembrane protein 106C
mm9_v1_chr3_+_51288108_51288406	0.169471	FOX{I1,J2}.p2	AK087967|Rab33b|19338|RAB33B, member of RAS oncogene family	AK144706|Rab33b|19338|RAB33B, member of RAS oncogene family	AK004974|Rab33b|19338|RAB33B, member of RAS oncogene family	AK159674|Rab33b|19338|RAB33B, member of RAS oncogene family	AB232629|Rab33b|19338|RAB33B, member of RAS oncogene family	AK170483|Rab33b|19338|RAB33B, member of RAS oncogene family	AK203331|Rab33b|19338|RAB33B, member of RAS oncogene family
mm9_v1_chr8_+_28153013_28153055	0.16929	FOX{I1,J2}.p2	NM_001039077|Prosc|114863|proline synthetase co-transcribed	NM_001039078|Prosc|114863|proline synthetase co-transcribed	NM_054057|Prosc|114863|proline synthetase co-transcribed	BC061045|Prosc|114863|proline synthetase co-transcribed	AK147670|Prosc|114863|proline synthetase co-transcribed
mm9_v1_chrX_+_75233629_75233629	0.16897	FOX{I1,J2}.p2	AK017258|5430402E10Rik|71351|RIKEN cDNA 5430402E10 gene	NM_027768|5430402E10Rik|71351|RIKEN cDNA 5430402E10 gene
mm9_v1_chr5_+_123678198_123678324	0.168027	FOX{I1,J2}.p2	NM_026000|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK011984|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK145487|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK168863|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK005216|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK011863|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	BC060245|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK168339|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK002280|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	AK010276|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	BC051930|Psmd9|67151|proteasome (prosome, macropain) 26S subunit, non-ATPase, 9
mm9_v1_chr5_+_22988226_22988243	0.167997	FOX{I1,J2}.p2	
mm9_v1_chr12_+_113826975_113827051	0.167477	FOX{I1,J2}.p2	DQ834374|Inf2|70435|inverted formin, FH2 and WH2 domain containing	NM_198411|Inf2|70435|inverted formin, FH2 and WH2 domain containing
mm9_v1_chr7_-_134158053_134158131	0.167391	FOX{I1,J2}.p2	BC006709|Mvp|78388|major vault protein	AK167899|Mvp|78388|major vault protein	AK168100|Mvp|78388|major vault protein	AK152534|Mvp|78388|major vault protein	AK088046|Mvp|78388|major vault protein	AF210456|Mvp|78388|major vault protein	NM_080638|Mvp|78388|major vault protein
mm9_v1_chr5_-_123183255_123183351	0.167387	FOX{I1,J2}.p2	AK050846|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr12_-_88067400_88067409	0.167373	FOX{I1,J2}.p2	BC019148|Angel1|68737|angel homolog 1 (Drosophila)	AK143549|Angel1|68737|angel homolog 1 (Drosophila)	NM_144524|Angel1|68737|angel homolog 1 (Drosophila)
mm9_v1_chr14_+_67254087_67254180	0.166342	FOX{I1,J2}.p2	AK085653|Adra1a|11549|adrenergic receptor, alpha 1a	AK079597|Adra1a|11549|adrenergic receptor, alpha 1a	NM_013461|Adra1a|11549|adrenergic receptor, alpha 1a	AK050183|Adra1a|11549|adrenergic receptor, alpha 1a	AK042759|Adra1a|11549|adrenergic receptor, alpha 1a	AK138919|Adra1a|11549|adrenergic receptor, alpha 1a
mm9_v1_chr7_-_14708338_14708398	0.165804	FOX{I1,J2}.p2	NM_001101586|Sult2a3|629203|sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 3
mm9_v1_chr8_-_46347363_46347377	0.164881	FOX{I1,J2}.p2	BC019485|F11|109821|coagulation factor XI	AF356627|F11|109821|coagulation factor XI
mm9_v1_chr2_+_122012007_122012007	0.164764	FOX{I1,J2}.p2	AK016695|4933406J08Rik|74401|RIKEN cDNA 4933406J08 gene	NM_028914|4933406J08Rik|74401|RIKEN cDNA 4933406J08 gene
mm9_v1_chrX_+_157600681_157600703	0.164439	FOX{I1,J2}.p2	AK040521|Scml2|107815|sex comb on midleg-like 2 (Drosophila)	AK031490|Scml2|107815|sex comb on midleg-like 2 (Drosophila)	NM_133194|Scml2|107815|sex comb on midleg-like 2 (Drosophila)
mm9_v1_chr12_+_111805938_111806039	0.163245	FOX{I1,J2}.p2	AK047089|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK178752|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK196801|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK201559|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform	AK211769|Ppp2r5c|26931|protein phosphatase 2, regulatory subunit B (B56), gamma isoform
mm9_v1_chr2_-_91550688_91550738	0.162785	FOX{I1,J2}.p2	BC023673|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK163962|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	BC023712|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	BC033419|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK149672|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK171440|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	BC016669|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	NM_145528|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK154470|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK171206|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)
mm9_v1_chr11_-_69571681_69571794	0.160224	FOX{I1,J2}.p2	BC114996|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A	NM_009089|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A	U37500|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A
mm9_v1_chr13_-_21494493_21494508	0.159581	FOX{I1,J2}.p2	AK220177|Zkscan3|72739|zinc finger with KRAB and SCAN domains 3
mm9_v1_chr9_-_64101354_64101425	0.158894	FOX{I1,J2}.p2	AK167336|Map2k1|26395|mitogen-activated protein kinase kinase 1	AB041567|Map2k1|26395|mitogen-activated protein kinase kinase 1	AK146233|Map2k1|26395|mitogen-activated protein kinase kinase 1	AK146931|Map2k1|26395|mitogen-activated protein kinase kinase 1	AK165894|Map2k1|26395|mitogen-activated protein kinase kinase 1	NM_008927|Map2k1|26395|mitogen-activated protein kinase kinase 1
mm9_v1_chrX_+_8849858_8849881	0.158581	FOX{I1,J2}.p2	BC027097|Xk|22439|Kell blood group precursor (McLeod phenotype) homolog
mm9_v1_chr8_+_126545374_126545424	0.158357	FOX{I1,J2}.p2	AK133906|Urb2|382038|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
mm9_v1_chr15_-_79762947_79763095	0.157813	FOX{I1,J2}.p2	AB221539|Cbx7|52609|chromobox homolog 7	AK045714|Cbx7|52609|chromobox homolog 7	NM_144811|Cbx7|52609|chromobox homolog 7
mm9_v1_chr10_+_126415772_126415772	0.15623	FOX{I1,J2}.p2	BC085142|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	NM_001113470|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm9_v1_chrX_+_13788273_13788273	0.155151	FOX{I1,J2}.p2	BC100482|Gm5382|385328|predicted gene 5382	NM_001034100|Gm5382|385328|predicted gene 5382
mm9_v1_chr15_-_89259756_89259902	0.154288	FOX{I1,J2}.p2	BC068195|Chkb|12651|choline kinase beta	AK170077|Chkb|12651|choline kinase beta
mm9_v1_chr18_-_56732522_56732548	0.152817	FOX{I1,J2}.p2	AK004991|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr17_+_37139426_37139615	0.15235	FOX{I1,J2}.p2	NM_001168501|Zfp57|22715|zinc finger protein 57	NM_001013745|Zfp57|22715|zinc finger protein 57	AK054083|Zfp57|22715|zinc finger protein 57	AK136241|Zfp57|22715|zinc finger protein 57	AK135881|Zfp57|22715|zinc finger protein 57	AK145368|Zfp57|22715|zinc finger protein 57
mm9_v1_chr2_+_178165235_178165311	0.151692	FOX{I1,J2}.p2	AK132328|Cdh26|381409|cadherin-like 26	BC053928|Cdh26|381409|cadherin-like 26	NM_198656|Cdh26|381409|cadherin-like 26
mm9_v1_chr11_-_78020699_78020746	0.151406	FOX{I1,J2}.p2	
mm9_v1_chrX_-_6765768_6765839	0.151392	FOX{I1,J2}.p2	AK142227|Clcn5|12728|chloride channel 5	AK145763|Clcn5|12728|chloride channel 5	BC036347|Clcn5|12728|chloride channel 5	AK052990|Clcn5|12728|chloride channel 5	AF134117|Clcn5|12728|chloride channel 5	NM_016691|Clcn5|12728|chloride channel 5
mm9_v1_chr11_-_106576550_106576578	0.150975	FOX{I1,J2}.p2	AK084527|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	AK169431|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	BC008519|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr17_-_35810624_35810662	0.150748	FOX{I1,J2}.p2	AF054823|Gtf2h4|14885|general transcription factor II H, polypeptide 4	NM_010364|Gtf2h4|14885|general transcription factor II H, polypeptide 4	BC055889|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK079456|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK088296|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK144680|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK146112|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK149320|Gtf2h4|14885|general transcription factor II H, polypeptide 4
mm9_v1_chr2_-_139892477_139892545	0.150512	FOX{I1,J2}.p2	AK036512|Tasp1|75812|taspase, threonine aspartase 1	NM_175225|Tasp1|75812|taspase, threonine aspartase 1	AK160983|Tasp1|75812|taspase, threonine aspartase 1	NM_001159640|Tasp1|75812|taspase, threonine aspartase 1	NM_001159641|Tasp1|75812|taspase, threonine aspartase 1	AK146320|Tasp1|75812|taspase, threonine aspartase 1	AK132709|Tasp1|75812|taspase, threonine aspartase 1	BC024597|Tasp1|75812|taspase, threonine aspartase 1	AK015624|Tasp1|75812|taspase, threonine aspartase 1
mm9_v1_chr4_+_83063621_83063661	0.149817	FOX{I1,J2}.p2	AK049933|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK016168|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK007563|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK010932|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK031870|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK031924|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	BC048713|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	NM_029949|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK019863|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3
mm9_v1_chr6_-_83391623_83391671	0.148681	FOX{I1,J2}.p2	AK044758|Tet3|194388|tet oncogene family member 3	AK046543|Tet3|194388|tet oncogene family member 3	AK046552|Tet3|194388|tet oncogene family member 3	AK046553|Tet3|194388|tet oncogene family member 3	NM_183138|Tet3|194388|tet oncogene family member 3
mm9_v1_chr4_+_99496130_99496190	0.146926	FOX{I1,J2}.p2	BC112327|Efcab7|230500|EF-hand calcium binding domain 7	AK143777|Efcab7|230500|EF-hand calcium binding domain 7	BC020077|Efcab7|230500|EF-hand calcium binding domain 7	NM_145549|Efcab7|230500|EF-hand calcium binding domain 7
mm9_v1_chr7_-_52003986_52003986	0.145781	FOX{I1,J2}.p2	AK030093|Zfp473|243963|zinc finger protein 473	NM_178734|Zfp473|243963|zinc finger protein 473
mm9_v1_chr11_-_100110215_100110277	0.144445	FOX{I1,J2}.p2	AF053235|Krt16|16666|keratin 16	BC103615|Krt16|16666|keratin 16	BC103616|Krt16|16666|keratin 16	BC103617|Krt16|16666|keratin 16	BC103666|Krt16|16666|keratin 16	BC114977|Krt16|16666|keratin 16	NM_008470|Krt16|16666|keratin 16	AK137631|Krt16|16666|keratin 16
mm9_v1_chr8_-_90886051_90886133	0.14396	FOX{I1,J2}.p2	AF084259|Brd7|26992|bromodomain containing 7	AK142758|Brd7|26992|bromodomain containing 7	NM_012047|Brd7|26992|bromodomain containing 7	AK138934|Brd7|26992|bromodomain containing 7
mm9_v1_chr14_+_22569752_22569797	0.143698	FOX{I1,J2}.p2	AK006211|Samd8|67630|sterile alpha motif domain containing 8	NM_026283|Samd8|67630|sterile alpha motif domain containing 8	BC116745|Samd8|67630|sterile alpha motif domain containing 8	BC116747|Samd8|67630|sterile alpha motif domain containing 8	AK015593|Samd8|67630|sterile alpha motif domain containing 8	BC100476|Samd8|67630|sterile alpha motif domain containing 8
mm9_v1_chrM_-_13886_13905	0.141991	FOX{I1,J2}.p2	
mm9_v1_chr4_+_132324212_132324345	0.140843	FOX{I1,J2}.p2	AK078006|Rpa2|19891|replication protein A2	AK169847|Rpa2|19891|replication protein A2	AK168680|Rpa2|19891|replication protein A2	NM_011284|Rpa2|19891|replication protein A2	BC004578|Rpa2|19891|replication protein A2	AK011530|Rpa2|19891|replication protein A2	D00812|Rpa2|19891|replication protein A2
mm9_v1_chr4_+_128365981_128366038	0.139921	FOX{I1,J2}.p2	NM_018774|Phc2|54383|polyhomeotic-like 2 (Drosophila)	BC057571|Phc2|54383|polyhomeotic-like 2 (Drosophila)
mm9_v1_chr2_+_4897167_4897179	0.138922	FOX{I1,J2}.p2	EU368184|Ucma|68527|upper zone of growth plate and cartilage matrix associated	NM_001113558|Ucma|68527|upper zone of growth plate and cartilage matrix associated	NM_001165932|Ucma|68527|upper zone of growth plate and cartilage matrix associated	NM_026754|Ucma|68527|upper zone of growth plate and cartilage matrix associated
mm9_v1_chr15_+_89153402_89153406	0.138073	FOX{I1,J2}.p2	BC096428|Adm2|223780|adrenomedullin 2	NM_182928|Adm2|223780|adrenomedullin 2	AB121035|Adm2|223780|adrenomedullin 2
mm9_v1_chr3_+_95363598_95363600	0.138015	FOX{I1,J2}.p2	AK016743|Hormad1|67981|HORMA domain containing 1	NM_026489|Hormad1|67981|HORMA domain containing 1	BC051129|Hormad1|67981|HORMA domain containing 1	AK014945|Hormad1|67981|HORMA domain containing 1	AK016324|Hormad1|67981|HORMA domain containing 1	AK163995|Hormad1|67981|HORMA domain containing 1	AY626343|Hormad1|67981|HORMA domain containing 1	AY634284|Hormad1|67981|HORMA domain containing 1
mm9_v1_chr13_+_32893882_32893918	0.136536	FOX{I1,J2}.p2	AK050368|Wrnip1|78903|Werner helicase interacting protein 1	AK167570|Wrnip1|78903|Werner helicase interacting protein 1	NM_030215|Wrnip1|78903|Werner helicase interacting protein 1	AK170542|Wrnip1|78903|Werner helicase interacting protein 1	BC010482|Wrnip1|78903|Werner helicase interacting protein 1	AK170846|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chrX_-_143888249_143888249	0.135137	FOX{I1,J2}.p2	NM_053230|Vmn1r41|113857|vomeronasal 1 receptor 41
mm9_v1_chr8_+_84239098_84239098	0.135069	FOX{I1,J2}.p2	BC064813|Inpp4b|234515|inositol polyphosphate-4-phosphatase, type II	NM_001024617|Inpp4b|234515|inositol polyphosphate-4-phosphatase, type II
mm9_v1_chr2_-_26207615_26207656	0.134635	FOX{I1,J2}.p2	AK004089|Dnlz|52838|DNL-type zinc finger	AK142070|Dnlz|52838|DNL-type zinc finger	NM_001139503|Dnlz|52838|DNL-type zinc finger	NM_001139504|Dnlz|52838|DNL-type zinc finger	NM_026828|Dnlz|52838|DNL-type zinc finger
mm9_v1_chr15_-_32174172_32174174	0.134578	FOX{I1,J2}.p2	AK007520|Snord123|66835|small nucleolar RNA, C/D box 123
mm9_v1_chr15_+_79178063_79178107	0.13237	FOX{I1,J2}.p2	BC022952|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)	NM_010755|Maff|17133|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein F (avian)
mm9_v1_chr1_-_89905074_89905142	0.131429	FOX{I1,J2}.p2	BC030843|Usp40|227334|ubiquitin specific peptidase 40	AK166303|Usp40|227334|ubiquitin specific peptidase 40	BC117957|Usp40|227334|ubiquitin specific peptidase 40	BC117958|Usp40|227334|ubiquitin specific peptidase 40	AK050239|Usp40|227334|ubiquitin specific peptidase 40	AK045613|Usp40|227334|ubiquitin specific peptidase 40	AK132295|Usp40|227334|ubiquitin specific peptidase 40	NM_001033291|Usp40|227334|ubiquitin specific peptidase 40	NM_001198573|Usp40|227334|ubiquitin specific peptidase 40
mm9_v1_chr5_+_110605872_110605990	0.131304	FOX{I1,J2}.p2	AK171773|Golga3|269682|golgi autoantigen, golgin subfamily a, 3	AK133623|Golga3|269682|golgi autoantigen, golgin subfamily a, 3	D78270|Golga3|269682|golgi autoantigen, golgin subfamily a, 3
mm9_v1_chr9_-_107775031_107775194	0.130717	FOX{I1,J2}.p2	AK145612|Rbm6|19654|RNA binding motif protein 6	AK078712|Rbm6|19654|RNA binding motif protein 6	AK030451|Rbm6|19654|RNA binding motif protein 6	AK077899|Rbm6|19654|RNA binding motif protein 6	AK134164|Rbm6|19654|RNA binding motif protein 6	AK081846|Rbm6|19654|RNA binding motif protein 6	AK164432|Rbm6|19654|RNA binding motif protein 6	AK029954|Rbm6|19654|RNA binding motif protein 6	NM_011251|Rbm6|19654|RNA binding motif protein 6	NM_029169|Rbm6|19654|RNA binding motif protein 6	BC026129|Rbm6|19654|RNA binding motif protein 6
mm9_v1_chr11_+_3102355_3102394	0.130244	FOX{I1,J2}.p2	NM_001166548|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1	AK041598|Eif4enif1|74203|eukaryotic translation initiation factor 4E nuclear import factor 1
mm9_v1_chr9_-_24913234_24913238	0.128873	FOX{I1,J2}.p2	AK208093|Herpud2|80517|HERPUD family member 2
mm9_v1_chr8_+_126547293_126547372	0.128675	FOX{I1,J2}.p2	BC151125|Urb2|382038|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	NM_001029876|Urb2|382038|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
mm9_v1_chr4_+_97444326_97444386	0.128198	FOX{I1,J2}.p2	BC075702|Nfia|18027|nuclear factor I/A	D90172|Nfia|18027|nuclear factor I/A
mm9_v1_chr11_-_51799215_51799347	0.128053	FOX{I1,J2}.p2	AK190260|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)
mm9_v1_chr5_-_124199380_124199422	0.127633	FOX{I1,J2}.p2	BC008229|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK012697|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK077854|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK166941|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK168476|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK017771|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005523|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005525|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_025438|Rsrc2|208606|arginine/serine-rich coiled-coil 2
mm9_v1_chr8_+_47825098_47825208	0.127606	FOX{I1,J2}.p2	NM_008391|Irf2|16363|interferon regulatory factor 2	AK087926|Irf2|16363|interferon regulatory factor 2	AK155025|Irf2|16363|interferon regulatory factor 2	BC110666|Irf2|16363|interferon regulatory factor 2	BC006577|Irf2|16363|interferon regulatory factor 2	AK036652|Irf2|16363|interferon regulatory factor 2	J03168|Irf2|16363|interferon regulatory factor 2
mm9_v1_chr5_-_77543903_77543908	0.126231	FOX{I1,J2}.p2	AK004798|Hopx|74318|HOP homeobox	AK009007|Hopx|74318|HOP homeobox
mm9_v1_chr8_+_94192087_94192089	0.126089	FOX{I1,J2}.p2	
mm9_v1_chr16_-_91647216_91647232	0.125882	FOX{I1,J2}.p2	NM_010256|Gart|14450|phosphoribosylglycinamide formyltransferase
mm9_v1_chr5_-_145652207_145652313	0.124885	FOX{I1,J2}.p2	AK034736|Smurf1|75788|SMAD specific E3 ubiquitin protein ligase 1
mm9_v1_chr10_+_42481347_42481484	0.123674	FOX{I1,J2}.p2	AK090248|Sec63|140740|SEC63-like (S. cerevisiae)	BC080810|Sec63|140740|SEC63-like (S. cerevisiae)
mm9_v1_chr4_+_88473179_88473319	0.123396	FOX{I1,J2}.p2	BC151087|Ifna6|15969|interferon alpha 6	NM_206871|Ifna6|15969|interferon alpha 6
mm9_v1_chr1_-_21951497_21951661	0.122999	FOX{I1,J2}.p2	AF263836|Kcnq5|226922|potassium voltage-gated channel, subfamily Q, member 5	AY679158|Kcnq5|226922|potassium voltage-gated channel, subfamily Q, member 5
mm9_v1_chr10_+_13686174_13686209	0.122387	FOX{I1,J2}.p2	AK147244|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK147348|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	AK147655|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2	NM_010437|Hivep2|15273|human immunodeficiency virus type I enhancer binding protein 2
mm9_v1_chr9_+_3335472_3335500	0.122163	FOX{I1,J2}.p2	AK020197|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK054267|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK081459|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK133489|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK041810|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK033352|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)
mm9_v1_chr9_+_107897371_107897371	0.121122	FOX{I1,J2}.p2	NM_001122635|Cdhr4|69398|cadherin-related family member 4
mm9_v1_chr9_+_92352215_92352231	0.120953	FOX{I1,J2}.p2	AK035919|Plscr4|235527|phospholipid scramblase 4	AK045372|Plscr4|235527|phospholipid scramblase 4	AK165919|Plscr4|235527|phospholipid scramblase 4	NM_178711|Plscr4|235527|phospholipid scramblase 4	AK035878|Plscr4|235527|phospholipid scramblase 4
mm9_v1_chr2_+_38441497_38441644	0.120932	FOX{I1,J2}.p2	AK214670|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK208733|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6
mm9_v1_chr16_+_22920486_22920556	0.120617	FOX{I1,J2}.p2	AY138460|Fetub|59083|fetuin beta	BC018341|Fetub|59083|fetuin beta
mm9_v1_chr8_+_19225477_19225477	0.120136	FOX{I1,J2}.p2	AB063109|Defb6|116746|defensin beta 6	BC119422|Defb6|116746|defensin beta 6	BC119423|Defb6|116746|defensin beta 6	BC141871|Defb6|116746|defensin beta 6	BC141872|Defb6|116746|defensin beta 6	NM_054074|Defb6|116746|defensin beta 6
mm9_v1_chr16_-_92321652_92321685	0.120088	FOX{I1,J2}.p2	AK029653|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene	BC147584|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene	BC147622|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene	AK016199|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene	NM_029252|4930563D23Rik|75328|RIKEN cDNA 4930563D23 gene
mm9_v1_chr16_+_8470854_8470905	0.1189	FOX{I1,J2}.p2	AK136614|BC024814|239706|cDNA sequence BC024814	AK089212|BC024814|239706|cDNA sequence BC024814	BC024814|BC024814|239706|cDNA sequence BC024814	NM_146247|BC024814|239706|cDNA sequence BC024814
mm9_v1_chr5_-_138042267_138042299	0.118873	FOX{I1,J2}.p2	BC039620|Mospd3|68929|motile sperm domain containing 3	NM_030037|Mospd3|68929|motile sperm domain containing 3	BC034167|Mospd3|68929|motile sperm domain containing 3
mm9_v1_chr5_+_136520613_136520627	0.118354	FOX{I1,J2}.p2	AK035268|Upk3b|100647|uroplakin 3B
mm9_v1_chr8_+_13869640_13869740	0.118346	FOX{I1,J2}.p2	NM_181854|Zfp828|101994|zinc finger protein 828	AK132164|Zfp828|101994|zinc finger protein 828	AK170835|Zfp828|101994|zinc finger protein 828	AK139963|Zfp828|101994|zinc finger protein 828	AK133990|Zfp828|101994|zinc finger protein 828	BC028991|Zfp828|101994|zinc finger protein 828	AK129444|Zfp828|101994|zinc finger protein 828
mm9_v1_chr17_-_23814415_23814446	0.118194	FOX{I1,J2}.p2	AK160136|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_001161746|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_013749|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a
mm9_v1_chr1_-_38721799_38721808	0.117566	FOX{I1,J2}.p2	AK046648|Aff3|16764|AF4/FMR2 family, member 3	NM_010678|Aff3|16764|AF4/FMR2 family, member 3
mm9_v1_chr19_+_55816299_55816310	0.117458	FOX{I1,J2}.p2	NM_001142918|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142919|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142920|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142921|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142922|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_001142923|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	NM_009333|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box	BC011397|Tcf7l2|21416|transcription factor 7-like 2, T-cell specific, HMG-box
mm9_v1_chr6_-_3444484_3444497	0.116877	FOX{I1,J2}.p2	BC096374|Hepacam2|101202|HEPACAM family member 2	AK033728|Hepacam2|101202|HEPACAM family member 2	AK050501|Hepacam2|101202|HEPACAM family member 2	NM_178899|Hepacam2|101202|HEPACAM family member 2
mm9_v1_chr15_-_58765248_58765299	0.115845	FOX{I1,J2}.p2	BC061187|Tatdn1|69694|TatD DNase domain containing 1	AK042248|Tatdn1|69694|TatD DNase domain containing 1	NM_175151|Tatdn1|69694|TatD DNase domain containing 1	AK010232|Tatdn1|69694|TatD DNase domain containing 1	AK161972|Tatdn1|69694|TatD DNase domain containing 1
mm9_v1_chr4_+_125724139_125724216	0.115776	FOX{I1,J2}.p2	AK050396|Mrps15|66407|mitochondrial ribosomal protein S15	NM_025544|Mrps15|66407|mitochondrial ribosomal protein S15	AK010330|Mrps15|66407|mitochondrial ribosomal protein S15
mm9_v1_chr11_+_101286385_101286400	0.115028	FOX{I1,J2}.p2	AK086362|Rundc1|217201|RUN domain containing 1	BC119592|Rundc1|217201|RUN domain containing 1	BC119593|Rundc1|217201|RUN domain containing 1	NM_172566|Rundc1|217201|RUN domain containing 1
mm9_v1_chr1_+_79772592_79772632	0.114963	FOX{I1,J2}.p2	NM_001081210|Mrpl44|69163|mitochondrial ribosomal protein L44
mm9_v1_chr7_-_112892755_112892902	0.114859	FOX{I1,J2}.p2	BC031418|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_020024|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK047115|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC080311|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK139383|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr4_+_114761644_114761734	0.114574	FOX{I1,J2}.p2	BC013542|Pdzk1ip1|67182|PDZK1 interacting protein 1	AB009296|Pdzk1ip1|67182|PDZK1 interacting protein 1
mm9_v1_chr12_-_100631260_100631297	0.11431	FOX{I1,J2}.p2	AK046748|Foxn3|71375|forkhead box N3
mm9_v1_chr2_+_35904992_35905006	0.112944	FOX{I1,J2}.p2	BC048673|Morn5|75495|MORN repeat containing 5	NM_029309|Morn5|75495|MORN repeat containing 5	BC036965|Morn5|75495|MORN repeat containing 5	AK005808|Morn5|75495|MORN repeat containing 5
mm9_v1_chr2_-_21126852_21126991	0.112298	FOX{I1,J2}.p2	BC132425|Enkur|71233|enkurin, TRPC channel interacting protein	BC132451|Enkur|71233|enkurin, TRPC channel interacting protein	BC099519|Enkur|71233|enkurin, TRPC channel interacting protein	AY454124|Enkur|71233|enkurin, TRPC channel interacting protein	AK017056|Enkur|71233|enkurin, TRPC channel interacting protein	NM_027728|Enkur|71233|enkurin, TRPC channel interacting protein
mm9_v1_chr8_-_19893102_19893120	0.112235	FOX{I1,J2}.p2	AK030539|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK088897|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene
mm9_v1_chr1_-_128727208_128727208	0.111919	FOX{I1,J2}.p2	NM_001081756|Nckap5|210356|NCK-associated protein 5	NM_176957|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr10_+_21993165_21993285	0.110991	FOX{I1,J2}.p2	NM_001177775|H60b|667281|histocompatibility 60b	FJ594066|Raet1d|56554|retinoic acid early transcript delta
mm9_v1_chr12_+_117316195_117316297	0.110648	FOX{I1,J2}.p2	AK038743|Vipr2|22355|vasoactive intestinal peptide receptor 2	NM_009511|Vipr2|22355|vasoactive intestinal peptide receptor 2	AK142357|Vipr2|22355|vasoactive intestinal peptide receptor 2	D28132|Vipr2|22355|vasoactive intestinal peptide receptor 2	BC138572|Vipr2|22355|vasoactive intestinal peptide receptor 2
mm9_v1_chr3_+_96449506_96449522	0.110322	FOX{I1,J2}.p2	NM_001081053|Itga10|213119|integrin, alpha 10	BC115770|Itga10|213119|integrin, alpha 10
mm9_v1_chr7_-_13639862_13640112	0.109714	FOX{I1,J2}.p2	BC129904|Mzf1|109889|myeloid zinc finger 1	BC129905|Mzf1|109889|myeloid zinc finger 1	AK145014|Mzf1|109889|myeloid zinc finger 1	AB088478|Mzf1|109889|myeloid zinc finger 1	BC060649|Mzf1|109889|myeloid zinc finger 1	AK030410|Mzf1|109889|myeloid zinc finger 1	NM_145819|Mzf1|109889|myeloid zinc finger 1
mm9_v1_chr14_-_56830194_56830253	0.109115	FOX{I1,J2}.p2	X12823|Gzmf|14943|granzyme F	BC145435|Gzmf|14943|granzyme F	BC100311|Gzmf|14943|granzyme F	NM_010374|Gzmf|14943|granzyme F	J03257|Gzmf|14943|granzyme F
mm9_v1_chr4_-_44723311_44723311	0.10903	FOX{I1,J2}.p2	M97013|Pax5|18507|paired box gene 5	NM_008782|Pax5|18507|paired box gene 5
mm9_v1_chr18_+_35750071_35750097	0.108619	FOX{I1,J2}.p2	AK166063|Matr3|17184|matrin 3
mm9_v1_chr4_+_101390011_101390043	0.108544	FOX{I1,J2}.p2	NM_001122899|Lepr|16847|leptin receptor	NM_010704|Lepr|16847|leptin receptor	NM_146146|Lepr|16847|leptin receptor	U52915|Lepr|16847|leptin receptor
mm9_v1_chr11_+_17157549_17157664	0.108408	FOX{I1,J2}.p2	X95591|C1d|57316|C1D nuclear receptor co-repressor	AK028702|C1d|57316|C1D nuclear receptor co-repressor	AK035169|C1d|57316|C1D nuclear receptor co-repressor	NM_020558|C1d|57316|C1D nuclear receptor co-repressor	BC005436|C1d|57316|C1D nuclear receptor co-repressor
mm9_v1_chr18_+_74375861_74375888	0.107862	FOX{I1,J2}.p2	AK083655|Cxxc1|74322|CXXC finger 1 (PHD domain)	NM_028868|Cxxc1|74322|CXXC finger 1 (PHD domain)	AK010337|Cxxc1|74322|CXXC finger 1 (PHD domain)	AY099096|Cxxc1|74322|CXXC finger 1 (PHD domain)
mm9_v1_chr2_+_164705533_164705558	0.107089	FOX{I1,J2}.p2	
mm9_v1_chr4_+_49644923_49645030	0.10643	FOX{I1,J2}.p2	NM_001163263|Rnf20|109331|ring finger protein 20	NM_182999|Rnf20|109331|ring finger protein 20	AK053783|Rnf20|109331|ring finger protein 20	AK085436|Rnf20|109331|ring finger protein 20	AK139883|Rnf20|109331|ring finger protein 20	AK048862|Rnf20|109331|ring finger protein 20	AK051278|Rnf20|109331|ring finger protein 20	BC052482|Rnf20|109331|ring finger protein 20	AK087860|Rnf20|109331|ring finger protein 20	AK220492|Rnf20|109331|ring finger protein 20	AK082529|Rnf20|109331|ring finger protein 20
mm9_v1_chr16_+_45158927_45158941	0.106159	FOX{I1,J2}.p2	AK005266|Atg3|67841|autophagy-related 3 (yeast)	AK011409|Atg3|67841|autophagy-related 3 (yeast)	AK150914|Atg3|67841|autophagy-related 3 (yeast)	AK159231|Atg3|67841|autophagy-related 3 (yeast)	NM_026402|Atg3|67841|autophagy-related 3 (yeast)
mm9_v1_chr14_+_31292750_31292775	0.106076	FOX{I1,J2}.p2	AJ344447|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	NM_133761|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm9_v1_chr4_-_149383091_149383185	0.10482	FOX{I1,J2}.p2	AK045199|H6pd|100198|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	NM_173371|H6pd|100198|hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)
mm9_v1_chr1_-_72583137_72583137	0.103793	FOX{I1,J2}.p2	BC098191|March4|381270|membrane-associated ring finger (C3HC4) 4	NM_001045533|March4|381270|membrane-associated ring finger (C3HC4) 4
mm9_v1_chr2_+_131776596_131776620	0.103053	FOX{I1,J2}.p2	AK043023|Prnd|26434|prion protein dublet	AK161043|Prnd|26434|prion protein dublet	DQ832281|Prnd|26434|prion protein dublet	NM_001126338|Prnd|26434|prion protein dublet	NM_023043|Prnd|26434|prion protein dublet	AF192384|Prnd|26434|prion protein dublet	AF192385|Prnd|26434|prion protein dublet	AF165166|Prnd|26434|prion protein dublet	BC025140|Prnd|26434|prion protein dublet
mm9_v1_chr11_-_101646571_101646623	0.102977	FOX{I1,J2}.p2	AK166136|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)	AK144590|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)	AK144538|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)	NM_008815|Etv4|18612|ets variant gene 4 (E1A enhancer binding protein, E1AF)
mm9_v1_chr12_+_45412878_45412942	0.102627	FOX{I1,J2}.p2	AK033938|Pnpla8|67452|patatin-like phospholipase domain containing 8
mm9_v1_chr2_+_4897196_4897196	0.102251	FOX{I1,J2}.p2	EF529510|Ucma|68527|upper zone of growth plate and cartilage matrix associated
mm9_v1_chr6_-_142421466_142421628	0.101729	FOX{I1,J2}.p2	BC021322|Gys2|232493|glycogen synthase 2	BC158081|Gys2|232493|glycogen synthase 2	NM_145572|Gys2|232493|glycogen synthase 2
mm9_v1_chr6_-_122287014_122287032	0.100535	FOX{I1,J2}.p2	U63386|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_001042623|Phc1|13619|polyhomeotic-like 1 (Drosophila)	NM_007905|Phc1|13619|polyhomeotic-like 1 (Drosophila)
mm9_v1_chr7_-_144506091_144506108	0.0999918	FOX{I1,J2}.p2	BC067018|Ebf3|13593|early B-cell factor 3
mm9_v1_chr13_+_104968913_104969020	0.0996426	FOX{I1,J2}.p2	AK042070|Trim23|81003|tripartite motif-containing 23	AK018217|Trim23|81003|tripartite motif-containing 23	AK029533|Trim23|81003|tripartite motif-containing 23	AK030843|Trim23|81003|tripartite motif-containing 23	AK036210|Trim23|81003|tripartite motif-containing 23	AK088922|Trim23|81003|tripartite motif-containing 23	BC056390|Trim23|81003|tripartite motif-containing 23	BC059017|Trim23|81003|tripartite motif-containing 23
mm9_v1_chr7_+_128089656_128089684	0.0991818	FOX{I1,J2}.p2	AK162059|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E
mm9_v1_chr4_-_107791061_107791155	0.098226	FOX{I1,J2}.p2	M91458|Scp2|20280|sterol carrier protein 2, liver	BC034613|Scp2|20280|sterol carrier protein 2, liver	AK004860|Scp2|20280|sterol carrier protein 2, liver	BC018384|Scp2|20280|sterol carrier protein 2, liver	NM_011327|Scp2|20280|sterol carrier protein 2, liver
mm9_v1_chrX_+_130722039_130722141	0.0973646	FOX{I1,J2}.p2	AK016872|Arl13a|74448|ADP-ribosylation factor-like 13A	NM_028947|Arl13a|74448|ADP-ribosylation factor-like 13A	BC100522|Arl13a|74448|ADP-ribosylation factor-like 13A
mm9_v1_chr19_-_4059293_4059472	0.0968288	FOX{I1,J2}.p2	BC021614|BC021614|225884|cDNA sequence BC021614	NM_144869|BC021614|225884|cDNA sequence BC021614	BC034269|BC021614|225884|cDNA sequence BC021614
mm9_v1_chr5_-_25211581_25211614	0.0966613	FOX{I1,J2}.p2	AK085093|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2	AK020192|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2	Y17040|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2	BC033417|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2	NM_020570|Xrcc2|57434|X-ray repair complementing defective repair in Chinese hamster cells 2
mm9_v1_chr2_+_143371807_143372226	0.0956431	FOX{I1,J2}.p2	AK158598|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK133620|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	NM_008792|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	BC057348|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK158493|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK161585|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	BC052013|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AK039783|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	M55669|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AF483512|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2	AF483513|Pcsk2|18549|proprotein convertase subtilisin/kexin type 2
mm9_v1_chr11_+_77161725_77161827	0.0954504	FOX{I1,J2}.p2	AK158449|Ssh2|237860|slingshot homolog 2 (Drosophila)	AK170142|Ssh2|237860|slingshot homolog 2 (Drosophila)	AK155232|Ssh2|237860|slingshot homolog 2 (Drosophila)
mm9_v1_chr12_+_88943636_88943653	0.0947388	FOX{I1,J2}.p2	AK145346|Oog1|193322|oogenesin 1	AK087852|Oog1|193322|oogenesin 1	AK135749|Oog1|193322|oogenesin 1	AK143386|Oog1|193322|oogenesin 1	NM_178657|Oog1|193322|oogenesin 1	BC086484|Oog1|193322|oogenesin 1
mm9_v1_chr13_+_42396844_42396991	0.0943597	FOX{I1,J2}.p2	BC029547|Edn1|13614|endothelin 1	AK040778|Edn1|13614|endothelin 1	AK153437|Edn1|13614|endothelin 1	AK152647|Edn1|13614|endothelin 1
mm9_v1_chr11_+_53270779_53270814	0.0941106	FOX{I1,J2}.p2	AK134332|Shroom1|71774|shroom family member 1	AK004934|Shroom1|71774|shroom family member 1	BC031598|Shroom1|71774|shroom family member 1
mm9_v1_chr5_+_32761332_32761346	0.0937573	FOX{I1,J2}.p2	NM_172707|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK166416|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr6_-_83004374_83004564	0.0932808	FOX{I1,J2}.p2	AK159188|Htra2|64704|HtrA serine peptidase 2	BC033276|Htra2|64704|HtrA serine peptidase 2	AF164513|Htra2|64704|HtrA serine peptidase 2	AF175324|Htra2|64704|HtrA serine peptidase 2	AK146338|Htra2|64704|HtrA serine peptidase 2	BC049880|Htra2|64704|HtrA serine peptidase 2	NM_019752|Htra2|64704|HtrA serine peptidase 2
mm9_v1_chr4_+_107040388_107040388	0.0930166	FOX{I1,J2}.p2	AK144734|Tmem48|72787|transmembrane protein 48	NM_028355|Tmem48|72787|transmembrane protein 48
mm9_v1_chr9_+_108241754_108241796	0.0928674	FOX{I1,J2}.p2	AK191208|Gpx1|14775|glutathione peroxidase 1	AK191913|Gpx1|14775|glutathione peroxidase 1	AK200043|Gpx1|14775|glutathione peroxidase 1	AK201721|Gpx1|14775|glutathione peroxidase 1	AK202661|Gpx1|14775|glutathione peroxidase 1	AK205185|Gpx1|14775|glutathione peroxidase 1
mm9_v1_chr12_+_81891479_81891592	0.0921817	FOX{I1,J2}.p2	AK030233|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK161132|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK143867|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	BC040401|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	NM_178682|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK151939|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK152820|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene	AK164823|4933426M11Rik|217684|RIKEN cDNA 4933426M11 gene
mm9_v1_chr11_-_86807135_86807208	0.091692	FOX{I1,J2}.p2	BC121190|Ypel2|77864|yippee-like 2 (Drosophila)	AK089126|Ypel2|77864|yippee-like 2 (Drosophila)	AK021387|Ypel2|77864|yippee-like 2 (Drosophila)
mm9_v1_chr8_+_34681015_34681015	0.0895741	FOX{I1,J2}.p2	AF285589|Tex15|104271|testis expressed gene 15	NM_031374|Tex15|104271|testis expressed gene 15
mm9_v1_chr5_-_143656888_143656920	0.0893934	FOX{I1,J2}.p2	BC115599|Fbxl18|231863|F-box and leucine-rich repeat protein 18	BC139739|Fbxl18|231863|F-box and leucine-rich repeat protein 18	AK154354|Fbxl18|231863|F-box and leucine-rich repeat protein 18	AK144757|Fbxl18|231863|F-box and leucine-rich repeat protein 18	NM_001033312|Fbxl18|231863|F-box and leucine-rich repeat protein 18
mm9_v1_chr18_-_34784206_34784257	0.0891857	FOX{I1,J2}.p2	BC021482|Brd8|78656|bromodomain containing 8	AK132365|Brd8|78656|bromodomain containing 8	AK014475|Brd8|78656|bromodomain containing 8	BC023837|Brd8|78656|bromodomain containing 8	AK019151|Brd8|78656|bromodomain containing 8	AK032320|Brd8|78656|bromodomain containing 8	AK161689|Brd8|78656|bromodomain containing 8	AK042446|Brd8|78656|bromodomain containing 8	AK172658|Brd8|78656|bromodomain containing 8
mm9_v1_chr5_+_35341726_35341726	0.0890384	FOX{I1,J2}.p2	AK014569|Rgs12|71729|regulator of G-protein signaling 12	AK161129|Rgs12|71729|regulator of G-protein signaling 12	NM_001163512|Rgs12|71729|regulator of G-protein signaling 12
mm9_v1_chr7_+_120909680_120909687	0.0889753	FOX{I1,J2}.p2	AK134774|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein	AK146506|Spon1|233744|spondin 1, (f-spondin) extracellular matrix protein
mm9_v1_chr9_-_36540210_36540345	0.0888392	FOX{I1,J2}.p2	AK017358|Stt3a|16430|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm9_v1_chr5_+_29524545_29524545	0.0886369	FOX{I1,J2}.p2	AF190664|Rnf32|56874|ring finger protein 32	NM_021470|Rnf32|56874|ring finger protein 32
mm9_v1_chr19_+_5493612_5493771	0.088062	FOX{I1,J2}.p2	AK195534|Cfl1|12631|cofilin 1, non-muscle	AK198064|Cfl1|12631|cofilin 1, non-muscle	AK200194|Cfl1|12631|cofilin 1, non-muscle	AK208902|Cfl1|12631|cofilin 1, non-muscle	AK215762|Cfl1|12631|cofilin 1, non-muscle
mm9_v1_chr5_+_32761426_32761470	0.0877512	FOX{I1,J2}.p2	AK166168|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK166623|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK168141|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr3_+_87723608_87723648	0.0877018	FOX{I1,J2}.p2	AK008117|Mrpl24|67707|mitochondrial ribosomal protein L24	AK008961|Mrpl24|67707|mitochondrial ribosomal protein L24
mm9_v1_chr9_-_110019806_110019945	0.0869963	FOX{I1,J2}.p2	BC062885|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK153969|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK184646|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK159601|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK146326|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr11_-_61575474_61575589	0.0869649	FOX{I1,J2}.p2	BC051438|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC106185|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK076811|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK077330|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK038680|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC023178|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164242|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164243|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164244|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_144806|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2
mm9_v1_chr9_+_51855254_51855279	0.0851342	FOX{I1,J2}.p2	NM_001104616|Rdx|19684|radixin	AK162204|Rdx|19684|radixin
mm9_v1_chr7_+_52810297_52810297	0.0832035	FOX{I1,J2}.p2	NM_025330|Hsd17b14|66065|hydroxysteroid (17-beta) dehydrogenase 14
mm9_v1_chr2_-_5765967_5766039	0.0823039	FOX{I1,J2}.p2	BC019753|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	BC023821|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	AK141463|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	AK161246|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	BC024787|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	BC022972|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	AK090122|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	NM_133837|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	AK159208|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)
mm9_v1_chr7_-_49314350_49314350	0.0822205	FOX{I1,J2}.p2	NM_001105056|Vmn2r59|628444|vomeronasal 2, receptor 59
mm9_v1_chr11_-_99091732_99091806	0.0818608	FOX{I1,J2}.p2	BC034509|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	BC061498|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	BC047141|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	AK018493|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	AK042961|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327022|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327023|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327024|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327025|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327026|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	AK076177|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm9_v1_chr15_+_95621222_95621461	0.0804662	FOX{I1,J2}.p2	BC060732|Ano6|105722|anoctamin 6	NM_175344|Ano6|105722|anoctamin 6	AK159411|Ano6|105722|anoctamin 6	AK089300|Ano6|105722|anoctamin 6
mm9_v1_chr5_-_139960370_139960390	0.0803682	FOX{I1,J2}.p2	BC058780|Zfand2a|100494|zinc finger, AN1-type domain 2A	AK146082|Zfand2a|100494|zinc finger, AN1-type domain 2A	AK171245|Zfand2a|100494|zinc finger, AN1-type domain 2A
mm9_v1_chr1_-_14745828_14746072	0.0801036	FOX{I1,J2}.p2	AB221639|Msc|17681|musculin	AF108216|Msc|17681|musculin	BC103594|Msc|17681|musculin	BC103592|Msc|17681|musculin	BC103593|Msc|17681|musculin	BC103623|Msc|17681|musculin	AF087035|Msc|17681|musculin	NM_010827|Msc|17681|musculin	AK138917|Msc|17681|musculin
mm9_v1_chr12_+_114047301_114047353	0.0800605	FOX{I1,J2}.p2	AK077390|BC022687|217887|cDNA sequence BC022687
mm9_v1_chr11_-_57332054_57332159	0.0794548	FOX{I1,J2}.p2	BC019518|Fam114a2|67726|family with sequence similarity 114, member A2	AK018570|Fam114a2|67726|family with sequence similarity 114, member A2	AK076316|Fam114a2|67726|family with sequence similarity 114, member A2	AK149763|Fam114a2|67726|family with sequence similarity 114, member A2	AK007968|Fam114a2|67726|family with sequence similarity 114, member A2	NM_001168667|Fam114a2|67726|family with sequence similarity 114, member A2	NM_001168668|Fam114a2|67726|family with sequence similarity 114, member A2	NM_026342|Fam114a2|67726|family with sequence similarity 114, member A2
mm9_v1_chr19_+_26822892_26822948	0.0781147	FOX{I1,J2}.p2	NM_026003|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	AK011935|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr2_+_154262114_154262265	0.0778464	FOX{I1,J2}.p2	AK148027|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_009823|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	NM_172860|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK040403|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	DQ213025|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	BC064679|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)	AK049206|Cbfa2t2|12396|core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)
mm9_v1_chr7_-_86762417_86762542	0.0775903	FOX{I1,J2}.p2	AY254686|Rhcg|56315|Rhesus blood group-associated C glycoprotein	BC119045|Rhcg|56315|Rhesus blood group-associated C glycoprotein	BC137652|Rhcg|56315|Rhesus blood group-associated C glycoprotein	AF193810|Rhcg|56315|Rhesus blood group-associated C glycoprotein	AK076757|Rhcg|56315|Rhesus blood group-associated C glycoprotein	NM_019799|Rhcg|56315|Rhesus blood group-associated C glycoprotein
mm9_v1_chr18_+_74375999_74376040	0.0773531	FOX{I1,J2}.p2	BC030938|Cxxc1|74322|CXXC finger 1 (PHD domain)
mm9_v1_chr9_+_108241599_108241672	0.077067	FOX{I1,J2}.p2	AK150548|Gpx1|14775|glutathione peroxidase 1	AK002245|Gpx1|14775|glutathione peroxidase 1	AK010999|Gpx1|14775|glutathione peroxidase 1	AK011019|Gpx1|14775|glutathione peroxidase 1	AK028171|Gpx1|14775|glutathione peroxidase 1	AK154833|Gpx1|14775|glutathione peroxidase 1	AK160388|Gpx1|14775|glutathione peroxidase 1	NM_008160|Gpx1|14775|glutathione peroxidase 1	BC086649|Gpx1|14775|glutathione peroxidase 1
mm9_v1_chr4_+_11685359_11685407	0.0764727	FOX{I1,J2}.p2	D87912|Cdh17|12557|cadherin 17	AK171733|Cdh17|12557|cadherin 17	BC042891|Cdh17|12557|cadherin 17	AF177669|Cdh17|12557|cadherin 17
mm9_v1_chr7_-_144506112_144506127	0.0759164	FOX{I1,J2}.p2	AK220542|Ebf3|13593|early B-cell factor 3	NM_001113414|Ebf3|13593|early B-cell factor 3	NM_001113415|Ebf3|13593|early B-cell factor 3	NM_010096|Ebf3|13593|early B-cell factor 3
mm9_v1_chr6_-_108135548_108135588	0.0758634	FOX{I1,J2}.p2	BC026981|Sumf1|58911|sulfatase modifying factor 1	AK160917|Sumf1|58911|sulfatase modifying factor 1	AK159192|Sumf1|58911|sulfatase modifying factor 1	AK161203|Sumf1|58911|sulfatase modifying factor 1	AK151874|Sumf1|58911|sulfatase modifying factor 1	NM_145937|Sumf1|58911|sulfatase modifying factor 1
mm9_v1_chr10_+_98486068_98486102	0.0755492	FOX{I1,J2}.p2	AK136761|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr8_+_94190341_94190551	0.0753365	FOX{I1,J2}.p2	
mm9_v1_chrX_+_162608411_162608448	0.0749906	FOX{I1,J2}.p2	AK045118|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK160583|Gemin8|237221|gem (nuclear organelle) associated protein 8	NM_146238|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK085045|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK037580|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK047511|Gemin8|237221|gem (nuclear organelle) associated protein 8	AK053774|Gemin8|237221|gem (nuclear organelle) associated protein 8
mm9_v1_chr7_+_87391261_87391440	0.074708	FOX{I1,J2}.p2	AK029565|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	NM_177765|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	AK007167|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	AK161519|Ttll13|269954|tubulin tyrosine ligase-like family, member 13
mm9_v1_chr6_-_143048295_143048370	0.0737103	FOX{I1,J2}.p2	AK172966|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	BC053913|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	AK141590|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene
mm9_v1_chr1_+_165978346_165978413	0.0736616	FOX{I1,J2}.p2	AK153623|Sele|20339|selectin, endothelial cell	M87862|Sele|20339|selectin, endothelial cell	NM_011345|Sele|20339|selectin, endothelial cell	BC119083|Sele|20339|selectin, endothelial cell	BC120795|Sele|20339|selectin, endothelial cell
mm9_v1_chr19_+_8945985_8946174	0.0735776	FOX{I1,J2}.p2	AK172428|Ubxn1|225896|UBX domain protein 1	BC006701|Ubxn1|225896|UBX domain protein 1	NM_146093|Ubxn1|225896|UBX domain protein 1	AK015468|Ubxn1|225896|UBX domain protein 1	AK150442|Ubxn1|225896|UBX domain protein 1	AK159708|Ubxn1|225896|UBX domain protein 1
mm9_v1_chr5_-_34517575_34517643	0.0731844	FOX{I1,J2}.p2	
mm9_v1_chr11_-_59850340_59850353	0.0728851	FOX{I1,J2}.p2	BC026796|Pemt|18618|phosphatidylethanolamine N-methyltransferase	NM_008819|Pemt|18618|phosphatidylethanolamine N-methyltransferase
mm9_v1_chr9_-_99336923_99337150	0.0728333	FOX{I1,J2}.p2	AK050469|Mras|17532|muscle and microspikes RAS	AB004879|Mras|17532|muscle and microspikes RAS	NM_008624|Mras|17532|muscle and microspikes RAS
mm9_v1_chr14_+_34030008_34030008	0.0728227	FOX{I1,J2}.p2	AK046097|Arhgap22|239027|Rho GTPase activating protein 22	NM_153800|Arhgap22|239027|Rho GTPase activating protein 22
mm9_v1_chr17_-_29052264_29052268	0.0725306	FOX{I1,J2}.p2	BC117930|4930539E08Rik|207819|RIKEN cDNA 4930539E08 gene	AK033585|4930539E08Rik|207819|RIKEN cDNA 4930539E08 gene	NM_172450|4930539E08Rik|207819|RIKEN cDNA 4930539E08 gene
mm9_v1_chr6_+_8898613_8898694	0.0719645	FOX{I1,J2}.p2	AK083014|Nxph1|18231|neurexophilin 1
mm9_v1_chr3_-_95861723_95861742	0.0714295	FOX{I1,J2}.p2	BC012691|Vps45|22365|vacuolar protein sorting 45 (yeast)
mm9_v1_chr4_-_131901576_131901664	0.0712964	FOX{I1,J2}.p2	BC019807|Rcc1|100088|regulator of chromosome condensation 1	AK155225|Rcc1|100088|regulator of chromosome condensation 1	AK150610|Rcc1|100088|regulator of chromosome condensation 1	AK153193|Rcc1|100088|regulator of chromosome condensation 1	AK153994|Rcc1|100088|regulator of chromosome condensation 1	AK150153|Rcc1|100088|regulator of chromosome condensation 1	BC057645|Rcc1|100088|regulator of chromosome condensation 1	AK076089|Rcc1|100088|regulator of chromosome condensation 1	NM_001197082|Rcc1|100088|regulator of chromosome condensation 1	NM_133878|Rcc1|100088|regulator of chromosome condensation 1
mm9_v1_chr14_+_17197678_17197719	0.0710265	FOX{I1,J2}.p2	AK087535|Top2b|21974|topoisomerase (DNA) II beta	AK163043|Top2b|21974|topoisomerase (DNA) II beta	AK041054|Top2b|21974|topoisomerase (DNA) II beta	BC041106|Top2b|21974|topoisomerase (DNA) II beta	BC054541|Top2b|21974|topoisomerase (DNA) II beta	NM_009409|Top2b|21974|topoisomerase (DNA) II beta
mm9_v1_chr16_-_21153958_21154072	0.0705096	FOX{I1,J2}.p2	AK009367|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009777|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009766|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009984|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	BC115655|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	BC115656|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009496|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009632|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009635|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK010016|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009997|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009566|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	NM_025634|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene	AK009751|2310042E22Rik|66561|RIKEN cDNA 2310042E22 gene
mm9_v1_chr17_+_26389892_26389910	0.0703355	FOX{I1,J2}.p2	AK017655|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK007781|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK010539|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like
mm9_v1_chr4_-_126002442_126002551	0.0701484	FOX{I1,J2}.p2	AB027138|Tekt2|24084|tektin 2	NM_011902|Tekt2|24084|tektin 2	BC008140|Tekt2|24084|tektin 2
mm9_v1_chr12_-_56403949_56403990	0.0694775	FOX{I1,J2}.p2	BC024754|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK028063|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AB041577|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK033405|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK163192|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK168298|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	NM_021529|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma
mm9_v1_chr9_-_78162603_78162603	0.0691464	FOX{I1,J2}.p2	NM_001164523|Omt2a|18379|oocyte maturation, alpha
mm9_v1_chr11_+_112643501_112643595	0.0687587	FOX{I1,J2}.p2	NM_011448|Sox9|20682|SRY-box containing gene 9	AK049986|Sox9|20682|SRY-box containing gene 9	AK030187|Sox9|20682|SRY-box containing gene 9	AK031516|Sox9|20682|SRY-box containing gene 9	BC023796|Sox9|20682|SRY-box containing gene 9	BC023808|Sox9|20682|SRY-box containing gene 9	BC024958|Sox9|20682|SRY-box containing gene 9	BC023953|Sox9|20682|SRY-box containing gene 9	AK220197|Sox9|20682|SRY-box containing gene 9	BC034264|Sox9|20682|SRY-box containing gene 9
mm9_v1_chr12_+_85750017_85750095	0.0686683	FOX{I1,J2}.p2	AK013494|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	NM_028377|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	AK133381|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	BC151099|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	BC151103|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene
mm9_v1_chr18_+_50438022_50438024	0.0680056	FOX{I1,J2}.p2	AY692448|Fam170a|225497|family with sequence similarity 170, member A	AY692449|Fam170a|225497|family with sequence similarity 170, member A	NM_001004061|Fam170a|225497|family with sequence similarity 170, member A	BC147592|Fam170a|225497|family with sequence similarity 170, member A	BC147595|Fam170a|225497|family with sequence similarity 170, member A	BC172108|Fam170a|225497|family with sequence similarity 170, member A	BC172111|Fam170a|225497|family with sequence similarity 170, member A	BC172113|Fam170a|225497|family with sequence similarity 170, member A
mm9_v1_chr4_-_148511650_148511708	0.0677077	FOX{I1,J2}.p2	BC138926|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	BC138927|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	AK011725|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	BC048521|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	AK012995|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	AK013038|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1	NM_027263|Apitd1|69928|apoptosis-inducing, TAF9-like domain 1
mm9_v1_chr3_-_10301182_10301182	0.0673292	FOX{I1,J2}.p2	BC030910|Fabp12|75497|fatty acid binding protein 12	NM_029310|Fabp12|75497|fatty acid binding protein 12
mm9_v1_chr14_+_57396489_57396496	0.0670029	FOX{I1,J2}.p2	AK164250|Gm10034|100125977|predicted gene 10034
mm9_v1_chr11_+_90110835_90110949	0.066437	FOX{I1,J2}.p2	AK004819|Mmd|67468|monocyte to macrophage differentiation-associated	AK158577|Mmd|67468|monocyte to macrophage differentiation-associated	AK171637|Mmd|67468|monocyte to macrophage differentiation-associated	AK149704|Mmd|67468|monocyte to macrophage differentiation-associated	BC028492|Mmd|67468|monocyte to macrophage differentiation-associated	BC076566|Mmd|67468|monocyte to macrophage differentiation-associated	AY424300|Mmd|67468|monocyte to macrophage differentiation-associated
mm9_v1_chr2_-_150865063_150865140	0.0663903	FOX{I1,J2}.p2	AK164971|Nanp|67311|N-acetylneuraminic acid phosphatase	BC018527|Nanp|67311|N-acetylneuraminic acid phosphatase	AK005566|Nanp|67311|N-acetylneuraminic acid phosphatase	AK021344|Nanp|67311|N-acetylneuraminic acid phosphatase	BC083086|Nanp|67311|N-acetylneuraminic acid phosphatase	NM_026086|Nanp|67311|N-acetylneuraminic acid phosphatase
mm9_v1_chr5_+_113919352_113919613	0.0663077	FOX{I1,J2}.p2	BC096526|Wscd2|320916|WSC domain containing 2	NM_177292|Wscd2|320916|WSC domain containing 2
mm9_v1_chr6_-_50250316_50250352	0.0660822	FOX{I1,J2}.p2	AK042104|Osbpl3|71720|oxysterol binding protein-like 3
mm9_v1_chr10_-_126467848_126467902	0.0658141	FOX{I1,J2}.p2	BC034286|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK020437|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK169164|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK018591|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK141183|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK012240|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK171656|Tsfm|66399|Ts translation elongation factor, mitochondrial	AK172112|Tsfm|66399|Ts translation elongation factor, mitochondrial	BC057904|Tsfm|66399|Ts translation elongation factor, mitochondrial	NM_025537|Tsfm|66399|Ts translation elongation factor, mitochondrial
mm9_v1_chr15_-_76476688_76476767	0.0656211	FOX{I1,J2}.p2	AK028994|Cyhr1|54151|cysteine and histidine rich 1
mm9_v1_chrX_+_35953741_35953908	0.0652163	FOX{I1,J2}.p2	AK087975|Mcts1|68995|malignant T cell amplified sequence 1	AK005292|Mcts1|68995|malignant T cell amplified sequence 1	NM_026902|Mcts1|68995|malignant T cell amplified sequence 1	BC010486|Mcts1|68995|malignant T cell amplified sequence 1
mm9_v1_chr1_-_137335507_137335652	0.0652049	FOX{I1,J2}.p2	AK137320|Nav1|215690|neuron navigator 1
mm9_v1_chr1_-_123229156_123229165	0.0651941	FOX{I1,J2}.p2	AK040703|Insig2|72999|insulin induced gene 2	NM_178082|Insig2|72999|insulin induced gene 2	AY156084|Insig2|72999|insulin induced gene 2
mm9_v1_chr4_-_129055233_129055271	0.0651464	FOX{I1,J2}.p2	AK010736|Zbtb8a|73680|zinc finger and BTB domain containing 8a	NM_028603|Zbtb8a|73680|zinc finger and BTB domain containing 8a
mm9_v1_chr17_-_13153182_13153211	0.064842	FOX{I1,J2}.p2	AK013275|Acat2|110460|acetyl-Coenzyme A acetyltransferase 2
mm9_v1_chr18_-_38369326_38369415	0.0646434	FOX{I1,J2}.p2	AY861431|Pcdh1|75599|protocadherin 1	BC040402|Pcdh1|75599|protocadherin 1	NM_029357|Pcdh1|75599|protocadherin 1
mm9_v1_chr7_+_134913327_134913502	0.0643257	FOX{I1,J2}.p2	AK136955|Orai3|269999|ORAI calcium release-activated calcium modulator 3	NM_198424|Orai3|269999|ORAI calcium release-activated calcium modulator 3	AK037138|Orai3|269999|ORAI calcium release-activated calcium modulator 3	BC061259|Orai3|269999|ORAI calcium release-activated calcium modulator 3	AB271216|Orai3|269999|ORAI calcium release-activated calcium modulator 3	AM712358|Orai3|269999|ORAI calcium release-activated calcium modulator 3
mm9_v1_chr5_+_130535973_130536156	0.0642134	FOX{I1,J2}.p2	
mm9_v1_chr6_-_30846696_30846797	0.0637558	FOX{I1,J2}.p2	AF205065|Copg2|54160|coatomer protein complex, subunit gamma 2	AK079599|Copg2|54160|coatomer protein complex, subunit gamma 2	AK178636|Copg2|54160|coatomer protein complex, subunit gamma 2	AK186993|Copg2|54160|coatomer protein complex, subunit gamma 2	AK149462|Copg2|54160|coatomer protein complex, subunit gamma 2	BC145898|Copg2|54160|coatomer protein complex, subunit gamma 2	BC145900|Copg2|54160|coatomer protein complex, subunit gamma 2	AK147943|Copg2|54160|coatomer protein complex, subunit gamma 2	BC049178|Copg2|54160|coatomer protein complex, subunit gamma 2	NM_017478|Copg2|54160|coatomer protein complex, subunit gamma 2	AK163668|Copg2|54160|coatomer protein complex, subunit gamma 2	AJ251067|Copg2|54160|coatomer protein complex, subunit gamma 2	AK088492|Copg2|54160|coatomer protein complex, subunit gamma 2
mm9_v1_chr19_+_8810274_8810348	0.0633657	FOX{I1,J2}.p2	AK145704|Wdr74|107071|WD repeat domain 74	AK077521|Wdr74|107071|WD repeat domain 74	BC019968|Wdr74|107071|WD repeat domain 74	NM_134139|Wdr74|107071|WD repeat domain 74
mm9_v1_chr16_-_35313780_35313815	0.063201	FOX{I1,J2}.p2	AK085223|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)	AK164647|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)
mm9_v1_chr9_+_56786000_56786014	0.0628491	FOX{I1,J2}.p2	AK209259|Imp3|102462|IMP3, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm9_v1_chr3_+_57229362_57229380	0.0623369	FOX{I1,J2}.p2	AK148484|Tm4sf4|229302|transmembrane 4 superfamily member 4	AK165731|Tm4sf4|229302|transmembrane 4 superfamily member 4	BC010814|Tm4sf4|229302|transmembrane 4 superfamily member 4
mm9_v1_chr2_-_144157626_144157845	0.0621784	FOX{I1,J2}.p2	AY090537|Ovol2|107586|ovo-like 2 (Drosophila)	AB101294|Ovol2|107586|ovo-like 2 (Drosophila)	AK167697|Ovol2|107586|ovo-like 2 (Drosophila)	BC031771|Ovol2|107586|ovo-like 2 (Drosophila)	NM_026924|Ovol2|107586|ovo-like 2 (Drosophila)	BC094445|Ovol2|107586|ovo-like 2 (Drosophila)	BC057210|Ovol2|107586|ovo-like 2 (Drosophila)
mm9_v1_chr14_+_119380708_119380718	0.0616736	FOX{I1,J2}.p2	
mm9_v1_chr17_-_59130757_59130797	0.0613441	FOX{I1,J2}.p2	BC034642|2610034M16Rik|69239|RIKEN cDNA 2610034M16 gene	BC033350|2610034M16Rik|69239|RIKEN cDNA 2610034M16 gene	NM_027001|2610034M16Rik|69239|RIKEN cDNA 2610034M16 gene
mm9_v1_chr8_+_72897445_72897456	0.0610983	FOX{I1,J2}.p2	NM_016685|Comp|12845|cartilage oligomeric matrix protein	AF033530|Comp|12845|cartilage oligomeric matrix protein	BC128368|Comp|12845|cartilage oligomeric matrix protein	BC128369|Comp|12845|cartilage oligomeric matrix protein
mm9_v1_chr4_-_88280078_88280089	0.0606764	FOX{I1,J2}.p2	BC053719|C87499|381590|expressed sequence C87499	AK135883|C87499|381590|expressed sequence C87499	AK163216|C87499|381590|expressed sequence C87499	NM_198663|C87499|381590|expressed sequence C87499
mm9_v1_chr7_-_11490398_11490398	0.0601973	FOX{I1,J2}.p2	NM_001185173|Zscan4b|665780|zinc finger and SCAN domain containing 4B
mm9_v1_chr13_+_54167169_54167276	0.059457	FOX{I1,J2}.p2	AK012650|Sfxn1|14057|sideroflexin 1	NM_027324|Sfxn1|14057|sideroflexin 1	AF325260|Sfxn1|14057|sideroflexin 1	BC005743|Sfxn1|14057|sideroflexin 1	AK151110|Sfxn1|14057|sideroflexin 1
mm9_v1_chr18_+_78020588_78020649	0.0586097	FOX{I1,J2}.p2	AK180896|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK184454|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK214653|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK214982|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1	AK215077|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chrX_+_106029816_106029906	0.0580956	FOX{I1,J2}.p2	AK086455|2810403D21Rik|69964|RIKEN cDNA 2810403D21 gene
mm9_v1_chr19_-_44181897_44181978	0.0580868	FOX{I1,J2}.p2	AK035326|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	U12473|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK150039|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK165275|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK018671|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK155328|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	BC018243|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK155393|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	AK164236|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	NM_001162410|Chuk|12675|conserved helix-loop-helix ubiquitous kinase	NM_007700|Chuk|12675|conserved helix-loop-helix ubiquitous kinase
mm9_v1_chr11_-_51502101_51502184	0.0573704	FOX{I1,J2}.p2	BC024353|0610009B22Rik|66050|RIKEN cDNA 0610009B22 gene	AK002369|0610009B22Rik|66050|RIKEN cDNA 0610009B22 gene	AK004363|0610009B22Rik|66050|RIKEN cDNA 0610009B22 gene	NM_025319|0610009B22Rik|66050|RIKEN cDNA 0610009B22 gene	AK007568|0610009B22Rik|66050|RIKEN cDNA 0610009B22 gene
mm9_v1_chr14_+_3740222_3740233	0.0572139	FOX{I1,J2}.p2	BC100412|Gm1973|100038846|predicted gene 1973	NM_029288|Gm1973|100038846|predicted gene 1973	AK005583|Gm1973|100038846|predicted gene 1973
mm9_v1_chr14_+_6956219_6956230	0.0572139	FOX{I1,J2}.p2	BC100412|Gm1973|100038846|predicted gene 1973	NM_029288|Gm1973|100038846|predicted gene 1973	AK005583|Gm1973|100038846|predicted gene 1973
mm9_v1_chr14_+_3500819_3500830	0.0572139	FOX{I1,J2}.p2	BC100412|Gm1973|100038846|predicted gene 1973	NM_029288|Gm1973|100038846|predicted gene 1973	AK005583|Gm1973|100038846|predicted gene 1973
mm9_v1_chr7_+_130267661_130267769	0.0570433	FOX{I1,J2}.p2	AK147327|Tnrc6a|233833|trinucleotide repeat containing 6a	AK008599|Tnrc6a|233833|trinucleotide repeat containing 6a	BC026849|Tnrc6a|233833|trinucleotide repeat containing 6a	AK083848|Tnrc6a|233833|trinucleotide repeat containing 6a
mm9_v1_chr11_+_19824374_19824394	0.0568766	FOX{I1,J2}.p2	BC066013|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr7_-_134028480_134028480	0.0549529	FOX{I1,J2}.p2	NM_001163774|Taok2|381921|TAO kinase 2	NM_001163775|Taok2|381921|TAO kinase 2
mm9_v1_chr7_+_27814096_27814122	0.0528499	FOX{I1,J2}.p2	BC018356|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	NM_133657|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	BC094017|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	L06463|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12
mm9_v1_chr13_+_14722520_14722529	0.0528481	FOX{I1,J2}.p2	AK167401|AW209491|105351|expressed sequence AW209491	NM_134067|AW209491|105351|expressed sequence AW209491
mm9_v1_chr3_-_113332817_113333068	0.051792	FOX{I1,J2}.p2	AK173272|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK179549|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK187884|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK084372|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK013288|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK161974|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK163729|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK134241|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	BC043695|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK161063|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	NM_001038696|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	NM_026043|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3
mm9_v1_chr5_-_123271283_123271353	0.0502077	FOX{I1,J2}.p2	AK147951|Anapc5|59008|anaphase-promoting complex subunit 5	BC046804|Anapc5|59008|anaphase-promoting complex subunit 5	AK075969|Anapc5|59008|anaphase-promoting complex subunit 5	AK159713|Anapc5|59008|anaphase-promoting complex subunit 5	AK159916|Anapc5|59008|anaphase-promoting complex subunit 5	AK167561|Anapc5|59008|anaphase-promoting complex subunit 5	AK168737|Anapc5|59008|anaphase-promoting complex subunit 5	AK168814|Anapc5|59008|anaphase-promoting complex subunit 5	AB041593|Anapc5|59008|anaphase-promoting complex subunit 5	AK151314|Anapc5|59008|anaphase-promoting complex subunit 5	AK151905|Anapc5|59008|anaphase-promoting complex subunit 5	AK152981|Anapc5|59008|anaphase-promoting complex subunit 5	AK153373|Anapc5|59008|anaphase-promoting complex subunit 5	AK153422|Anapc5|59008|anaphase-promoting complex subunit 5	AK159204|Anapc5|59008|anaphase-promoting complex subunit 5	AK148679|Anapc5|59008|anaphase-promoting complex subunit 5	AK049719|Anapc5|59008|anaphase-promoting complex subunit 5	AK169196|Anapc5|59008|anaphase-promoting complex subunit 5	AK088327|Anapc5|59008|anaphase-promoting complex subunit 5	NM_001042491|Anapc5|59008|anaphase-promoting complex subunit 5	NM_021505|Anapc5|59008|anaphase-promoting complex subunit 5
mm9_v1_chr16_-_20425991_20426058	0.0500357	FOX{I1,J2}.p2	AK050565|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm9_v1_chr11_-_106576585_106576603	0.0489345	FOX{I1,J2}.p2	NM_001032378|Pecam1|18613|platelet/endothelial cell adhesion molecule 1	NM_008816|Pecam1|18613|platelet/endothelial cell adhesion molecule 1
mm9_v1_chr6_+_17643923_17644228	0.0484483	FOX{I1,J2}.p2	BC024652|St7|64213|suppression of tumorigenicity 7	AY007792|St7|64213|suppression of tumorigenicity 7	AY007793|St7|64213|suppression of tumorigenicity 7
mm9_v1_chr3_+_87973934_87974022	0.0480026	FOX{I1,J2}.p2	AK032042|Mef2d|17261|myocyte enhancer factor 2D
mm9_v1_chr12_+_73862177_73862301	0.0478472	FOX{I1,J2}.p2	NM_008910|Ppm1a|19042|protein phosphatase 1A, magnesium dependent, alpha isoform	AK076054|Ppm1a|19042|protein phosphatase 1A, magnesium dependent, alpha isoform
mm9_v1_chr1_+_97230610_97230736	0.0476817	FOX{I1,J2}.p2	AK152164|Fam174a|67698|family with sequence similarity 174, member A
mm9_v1_chrX_-_71269083_71269215	0.0474629	FOX{I1,J2}.p2	U56773|Irak1|16179|interleukin-1 receptor-associated kinase 1	AB088370|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK045958|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK052933|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK144879|Irak1|16179|interleukin-1 receptor-associated kinase 1	AK143694|Irak1|16179|interleukin-1 receptor-associated kinase 1
mm9_v1_chr7_-_29177654_29177722	0.0465031	FOX{I1,J2}.p2	BC083314|Med29|67224|mediator complex subunit 29	BC023192|Med29|67224|mediator complex subunit 29	AK005112|Med29|67224|mediator complex subunit 29	AK013006|Med29|67224|mediator complex subunit 29	NM_026042|Med29|67224|mediator complex subunit 29
mm9_v1_chr17_+_28450489_28450522	0.0464154	FOX{I1,J2}.p2	AK172283|Fance|72775|Fanconi anemia, complementation group E	AK135017|Fance|72775|Fanconi anemia, complementation group E	AK013325|Fance|72775|Fanconi anemia, complementation group E	BC039987|Fance|72775|Fanconi anemia, complementation group E	BC016538|Fance|72775|Fanconi anemia, complementation group E
mm9_v1_chr2_+_22924846_22924986	0.0464052	FOX{I1,J2}.p2	AK005001|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC061484|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr11_+_53270706_53270763	0.0462704	FOX{I1,J2}.p2	NM_027917|Shroom1|71774|shroom family member 1	BC005761|Shroom1|71774|shroom family member 1	AK035462|Shroom1|71774|shroom family member 1	AK085693|Shroom1|71774|shroom family member 1
mm9_v1_chr19_+_29175864_29175994	0.0461724	FOX{I1,J2}.p2	AK009709|Rcl1|59028|RNA terminal phosphate cyclase-like 1	NM_021525|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK168153|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK012585|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK077751|Rcl1|59028|RNA terminal phosphate cyclase-like 1	BC053404|Rcl1|59028|RNA terminal phosphate cyclase-like 1	BC004574|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AK153377|Rcl1|59028|RNA terminal phosphate cyclase-like 1	AJ276895|Rcl1|59028|RNA terminal phosphate cyclase-like 1
mm9_v1_chr9_+_36500804_36500844	0.0460579	FOX{I1,J2}.p2	AK005705|Acrv1|11451|acrosomal vesicle protein 1	BC100459|Acrv1|11451|acrosomal vesicle protein 1	NM_007391|Acrv1|11451|acrosomal vesicle protein 1	U31992|Acrv1|11451|acrosomal vesicle protein 1	AK030129|Acrv1|11451|acrosomal vesicle protein 1	BC139101|Acrv1|11451|acrosomal vesicle protein 1	BC139103|Acrv1|11451|acrosomal vesicle protein 1
mm9_v1_chr1_+_177628723_177628723	0.0452846	FOX{I1,J2}.p2	AK133092|Wdr64|75820|WD repeat domain 64	NM_029453|Wdr64|75820|WD repeat domain 64
mm9_v1_chr3_+_66789621_66789657	0.0446449	FOX{I1,J2}.p2	AK168539|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC038303|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK004742|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK169340|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC027501|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC083123|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr5_+_110605719_110605719	0.0444492	FOX{I1,J2}.p2	BC053002|Golga3|269682|golgi autoantigen, golgin subfamily a, 3	NM_008146|Golga3|269682|golgi autoantigen, golgin subfamily a, 3
mm9_v1_chrX_+_147955666_147955827	0.0444138	FOX{I1,J2}.p2	AK147939|Phf8|320595|PHD finger protein 8	AK036609|Phf8|320595|PHD finger protein 8	AK040943|Phf8|320595|PHD finger protein 8	AK134137|Phf8|320595|PHD finger protein 8	BC138899|Phf8|320595|PHD finger protein 8
mm9_v1_chr4_+_59594461_59594510	0.0436135	FOX{I1,J2}.p2	AK085899|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	AK136773|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	AK011910|Hsdl2|72479|hydroxysteroid dehydrogenase like 2
mm9_v1_chr11_-_94410463_94410520	0.0429919	FOX{I1,J2}.p2	BC139274|Rsad1|237926|radical S-adenosyl methionine domain containing 1	BC139276|Rsad1|237926|radical S-adenosyl methionine domain containing 1	BC145594|Rsad1|237926|radical S-adenosyl methionine domain containing 1	AK148401|Rsad1|237926|radical S-adenosyl methionine domain containing 1	AK046706|Rsad1|237926|radical S-adenosyl methionine domain containing 1	NM_001013381|Rsad1|237926|radical S-adenosyl methionine domain containing 1
mm9_v1_chr16_-_91647153_91647201	0.042379	FOX{I1,J2}.p2	AK146478|Gart|14450|phosphoribosylglycinamide formyltransferase	BC070465|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168876|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168445|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168864|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168458|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168501|Gart|14450|phosphoribosylglycinamide formyltransferase	U01023|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168724|Gart|14450|phosphoribosylglycinamide formyltransferase	AK168796|Gart|14450|phosphoribosylglycinamide formyltransferase	AK146355|Gart|14450|phosphoribosylglycinamide formyltransferase
mm9_v1_chr19_+_36422888_36423026	0.0415309	FOX{I1,J2}.p2	AK002387|Pcgf5|76073|polycomb group ring finger 5	AK080025|Pcgf5|76073|polycomb group ring finger 5
mm9_v1_chrX_+_33868347_33868594	0.0406374	FOX{I1,J2}.p2	AK167341|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK016522|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK147751|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	NM_028894|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	BC120688|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	BC120690|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3	AK030866|Lonrf3|74365|LON peptidase N-terminal domain and ring finger 3
mm9_v1_chr7_-_134160841_134160854	0.0399104	FOX{I1,J2}.p2	AK013840|2900092E17Rik|67278|RIKEN cDNA 2900092E17 gene
mm9_v1_chrX_-_16488889_16488889	0.039895	FOX{I1,J2}.p2	BC090623|Ndp|17986|Norrie disease (pseudoglioma) (human)	NM_010883|Ndp|17986|Norrie disease (pseudoglioma) (human)
mm9_v1_chr17_-_46919586_46919619	0.0395781	FOX{I1,J2}.p2	BC030165|Rpl7l1|66229|ribosomal protein L7-like 1	AK007884|Rpl7l1|66229|ribosomal protein L7-like 1	AK005264|Rpl7l1|66229|ribosomal protein L7-like 1	AK008672|Rpl7l1|66229|ribosomal protein L7-like 1	AK090038|Rpl7l1|66229|ribosomal protein L7-like 1	AK090082|Rpl7l1|66229|ribosomal protein L7-like 1	AK167036|Rpl7l1|66229|ribosomal protein L7-like 1	NM_025433|Rpl7l1|66229|ribosomal protein L7-like 1	AK166499|Rpl7l1|66229|ribosomal protein L7-like 1
mm9_v1_chr4_+_108000728_108000805	0.0395721	FOX{I1,J2}.p2	AK081388|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	AK044999|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	NM_027250|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	AK008518|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	AK168902|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	AK168344|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene	BC012391|2010305A19Rik|69893|RIKEN cDNA 2010305A19 gene
mm9_v1_chr2_-_71205587_71205679	0.0395122	FOX{I1,J2}.p2	BC013845|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC060505|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK019150|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK083156|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_172436|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK147948|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK030595|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK144958|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK208043|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm9_v1_chr15_+_37162790_37162813	0.0393326	FOX{I1,J2}.p2	AK002633|Grhl2|252973|grainyhead-like 2 (Drosophila)	NM_026496|Grhl2|252973|grainyhead-like 2 (Drosophila)
mm9_v1_chr2_+_173348092_173348148	0.038729	FOX{I1,J2}.p2	NM_028158|1700021F07Rik|72221|RIKEN cDNA 1700021F07 gene	BC050790|1700021F07Rik|72221|RIKEN cDNA 1700021F07 gene	AK006200|1700021F07Rik|72221|RIKEN cDNA 1700021F07 gene
mm9_v1_chr1_-_9621172_9621249	0.0384374	FOX{I1,J2}.p2	BC037765|2610203C22Rik|72481|RIKEN cDNA 2610203C22 gene	BC064105|2610203C22Rik|72481|RIKEN cDNA 2610203C22 gene	AK011866|2610203C22Rik|72481|RIKEN cDNA 2610203C22 gene	AK082741|2610203C22Rik|72481|RIKEN cDNA 2610203C22 gene	AK009214|2610203C22Rik|72481|RIKEN cDNA 2610203C22 gene
mm9_v1_chr12_-_86715324_86715411	0.0379617	FOX{I1,J2}.p2	AK186798|Tmed10|68581|transmembrane emp24-like trafficking protein 10 (yeast)
mm9_v1_chr18_-_46625409_46625469	0.0378393	FOX{I1,J2}.p2	AK076850|Mospd4|72076|motile sperm domain containing 4	AK008233|Mospd4|72076|motile sperm domain containing 4	NM_028086|Mospd4|72076|motile sperm domain containing 4
mm9_v1_chr11_+_80196766_80196898	0.0373694	FOX{I1,J2}.p2	AK087885|Zfp207|22680|zinc finger protein 207	NM_001130169|Zfp207|22680|zinc finger protein 207	NM_001130170|Zfp207|22680|zinc finger protein 207	NM_001130171|Zfp207|22680|zinc finger protein 207	NM_011751|Zfp207|22680|zinc finger protein 207	AK140139|Zfp207|22680|zinc finger protein 207	AK146787|Zfp207|22680|zinc finger protein 207	AK159683|Zfp207|22680|zinc finger protein 207	AK033497|Zfp207|22680|zinc finger protein 207	BC003715|Zfp207|22680|zinc finger protein 207	AB013357|Zfp207|22680|zinc finger protein 207	AB032196|Zfp207|22680|zinc finger protein 207
mm9_v1_chrY_-_622984_622997	0.0372625	FOX{I1,J2}.p2	BC021453|Ddx3y|26900|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
mm9_v1_chr11_+_102291828_102291840	0.0364308	FOX{I1,J2}.p2	AK152944|Grn|14824|granulin	AK153183|Grn|14824|granulin	AK159397|Grn|14824|granulin	AK159428|Grn|14824|granulin	AK160074|Grn|14824|granulin	AK152118|Grn|14824|granulin	AK160022|Grn|14824|granulin	AK150420|Grn|14824|granulin	BC049943|Grn|14824|granulin	AK152213|Grn|14824|granulin	BC129849|Grn|14824|granulin	BC129850|Grn|14824|granulin	AK150338|Grn|14824|granulin	M86736|Grn|14824|granulin
mm9_v1_chr7_+_19996439_19996453	0.0362075	FOX{I1,J2}.p2	AK009950|Ckm|12715|creatine kinase, muscle	AK137460|Ckm|12715|creatine kinase, muscle	NM_007710|Ckm|12715|creatine kinase, muscle	X03233|Ckm|12715|creatine kinase, muscle	BC132424|Ckm|12715|creatine kinase, muscle	BC132426|Ckm|12715|creatine kinase, muscle
mm9_v1_chr11_-_69761489_69761691	0.0360861	FOX{I1,J2}.p2	AB008453|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	M23383|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	BC014282|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	AK138832|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	AK164310|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	AK137607|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	AK160882|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4	NM_009204|Slc2a4|20528|solute carrier family 2 (facilitated glucose transporter), member 4
mm9_v1_chr10_-_100051657_100051858	0.0360703	FOX{I1,J2}.p2	AK015251|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK043358|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	BC082587|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK082894|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene	AK032226|4930430F08Rik|68281|RIKEN cDNA 4930430F08 gene
mm9_v1_chr15_-_85408499_85408499	0.0353999	FOX{I1,J2}.p2	BC066003|Wnt7b|22422|wingless-related MMTV integration site 7B	NM_001163634|Wnt7b|22422|wingless-related MMTV integration site 7B
mm9_v1_chr2_-_26207531_26207599	0.0352795	FOX{I1,J2}.p2	BC031595|Dnlz|52838|DNL-type zinc finger	BC139334|Dnlz|52838|DNL-type zinc finger	BC139333|Dnlz|52838|DNL-type zinc finger
mm9_v1_chr12_-_40763924_40763965	0.0343798	FOX{I1,J2}.p2	BC029234|Arl4a|11861|ADP-ribosylation factor-like 4A	BC003725|Arl4a|11861|ADP-ribosylation factor-like 4A	AK168618|Arl4a|11861|ADP-ribosylation factor-like 4A	AK048606|Arl4a|11861|ADP-ribosylation factor-like 4A	AK137751|Arl4a|11861|ADP-ribosylation factor-like 4A	NM_007487|Arl4a|11861|ADP-ribosylation factor-like 4A
mm9_v1_chr3_+_41359653_41359655	0.0338261	FOX{I1,J2}.p2	AK049332|Phf17|269424|PHD finger protein 17	NM_001130184|Phf17|269424|PHD finger protein 17
mm9_v1_chr16_+_96366980_96367038	0.0334263	FOX{I1,J2}.p2	AK084688|Wrb|71446|tryptophan rich basic protein	AK172079|Wrb|71446|tryptophan rich basic protein	BC031769|Wrb|71446|tryptophan rich basic protein	NM_207301|Wrb|71446|tryptophan rich basic protein	AK021091|Wrb|71446|tryptophan rich basic protein
mm9_v1_chr2_-_28438389_28438521	0.0329797	FOX{I1,J2}.p2	AK045419|Gtf3c5|70239|general transcription factor IIIC, polypeptide 5
mm9_v1_chr6_+_35202672_35202740	0.0326734	FOX{I1,J2}.p2	AK171831|1810058I24Rik|67705|RIKEN cDNA 1810058I24 gene	AK007895|1810058I24Rik|67705|RIKEN cDNA 1810058I24 gene	AK155176|1810058I24Rik|67705|RIKEN cDNA 1810058I24 gene	AK158055|1810058I24Rik|67705|RIKEN cDNA 1810058I24 gene	AK004512|1810058I24Rik|67705|RIKEN cDNA 1810058I24 gene
mm9_v1_chr19_+_7687030_7687100	0.0317299	FOX{I1,J2}.p2	AK007015|Hrasls5|66727|HRAS-like suppressor family, member 5	AK014971|Hrasls5|66727|HRAS-like suppressor family, member 5	NM_025731|Hrasls5|66727|HRAS-like suppressor family, member 5	BC061008|Hrasls5|66727|HRAS-like suppressor family, member 5	AK006790|Hrasls5|66727|HRAS-like suppressor family, member 5	AK006527|Hrasls5|66727|HRAS-like suppressor family, member 5	AB261168|Hrasls5|66727|HRAS-like suppressor family, member 5	AB447517|Hrasls5|66727|HRAS-like suppressor family, member 5
mm9_v1_chr2_+_103809709_103809717	0.0317291	FOX{I1,J2}.p2	NM_001142336|Lmo2|16909|LIM domain only 2
mm9_v1_chr6_-_72185157_72185278	0.0314419	FOX{I1,J2}.p2	AB049066|Atoh8|71093|atonal homolog 8 (Drosophila)	AB046528|Atoh8|71093|atonal homolog 8 (Drosophila)	AY349615|Atoh8|71093|atonal homolog 8 (Drosophila)
mm9_v1_chr4_+_11685294_11685306	0.0313971	FOX{I1,J2}.p2	AK155633|Cdh17|12557|cadherin 17	NM_019753|Cdh17|12557|cadherin 17
mm9_v1_chr7_+_20593371_20593373	0.0312384	FOX{I1,J2}.p2	AY596196|Nlrp9b|243874|NLR family, pyrin domain containing 9B	NM_194058|Nlrp9b|243874|NLR family, pyrin domain containing 9B	BC141249|Nlrp9b|243874|NLR family, pyrin domain containing 9B
mm9_v1_chr4_-_147818818_147818893	0.0311178	FOX{I1,J2}.p2	BC071203|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK004550|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK078442|Ubiad1|71707|UbiA prenyltransferase domain containing 1	NM_027873|Ubiad1|71707|UbiA prenyltransferase domain containing 1	AK034787|Ubiad1|71707|UbiA prenyltransferase domain containing 1
mm9_v1_chr12_+_73637330_73637353	0.0309986	FOX{I1,J2}.p2	AK076035|1810048J11Rik|67708|RIKEN cDNA 1810048J11 gene	NM_026327|1810048J11Rik|67708|RIKEN cDNA 1810048J11 gene
mm9_v1_chr2_+_118639930_118640030	0.0307422	FOX{I1,J2}.p2	AK028590|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed	AK012148|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed	AK036374|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed	AK013184|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed	BC031709|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed
mm9_v1_chr11_-_98261715_98261736	0.0303626	FOX{I1,J2}.p2	AK170817|Pgap3|320655|post-GPI attachment to proteins 3	AK052486|Pgap3|320655|post-GPI attachment to proteins 3	AK078974|Pgap3|320655|post-GPI attachment to proteins 3	BC035945|Pgap3|320655|post-GPI attachment to proteins 3
mm9_v1_chr17_+_32421723_32421761	0.0301312	FOX{I1,J2}.p2	
mm9_v1_chr8_+_74967757_74967859	0.0289279	FOX{I1,J2}.p2	AK133815|1700030K09Rik|72254|RIKEN cDNA 1700030K09 gene	NM_028170|1700030K09Rik|72254|RIKEN cDNA 1700030K09 gene	BC008558|1700030K09Rik|72254|RIKEN cDNA 1700030K09 gene	AK089918|1700030K09Rik|72254|RIKEN cDNA 1700030K09 gene
mm9_v1_chr2_+_22924561_22924686	0.028451	FOX{I1,J2}.p2	NM_001102437|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	NM_001102438|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	AK147839|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC053518|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC035202|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr2_+_112219335_112219462	0.02838	FOX{I1,J2}.p2	AK036861|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	NM_024254|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK168639|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK049599|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK151464|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK010654|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK152570|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	BC003216|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	BC012402|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	BC080661|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene	AK162183|2410042D21Rik|72425|RIKEN cDNA 2410042D21 gene
mm9_v1_chr10_-_88969371_88969402	0.0281029	FOX{I1,J2}.p2	U09416|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	BC015261|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	AK050566|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	AK002513|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	AK132255|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	NM_001163700|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4	NM_009108|Nr1h4|20186|nuclear receptor subfamily 1, group H, member 4
mm9_v1_chr2_-_124949149_124949396	0.0280182	FOX{I1,J2}.p2	BC060946|Myef2|17876|myelin basic protein expression factor 2, repressor	AK129336|Myef2|17876|myelin basic protein expression factor 2, repressor	AK142363|Myef2|17876|myelin basic protein expression factor 2, repressor	AK143230|Myef2|17876|myelin basic protein expression factor 2, repressor	AK048404|Myef2|17876|myelin basic protein expression factor 2, repressor	NM_001162417|Myef2|17876|myelin basic protein expression factor 2, repressor	NM_001162418|Myef2|17876|myelin basic protein expression factor 2, repressor	NM_010852|Myef2|17876|myelin basic protein expression factor 2, repressor	AK012133|Myef2|17876|myelin basic protein expression factor 2, repressor
mm9_v1_chr5_+_144090975_144090986	0.0275341	FOX{I1,J2}.p2	AK002861|0610040B10Rik|67672|RIKEN cDNA 0610040B10 gene	AK009603|0610040B10Rik|67672|RIKEN cDNA 0610040B10 gene	AK144491|0610040B10Rik|67672|RIKEN cDNA 0610040B10 gene
mm9_v1_chr11_-_101278690_101278747	0.027076	FOX{I1,J2}.p2	AK168281|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1	AK136332|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1	AK078016|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1	BC005711|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1	NM_144829|Aarsd1|69684|alanyl-tRNA synthetase domain containing 1
mm9_v1_chr1_+_58561979_58562000	0.0270089	FOX{I1,J2}.p2	AK138448|Gm15834|100306960|predicted gene 15834	AK144771|Gm15834|100306960|predicted gene 15834	AK053027|Gm15834|100306960|predicted gene 15834
mm9_v1_chr11_+_98798970_98799011	0.0266974	FOX{I1,J2}.p2	X56572|Rara|19401|retinoic acid receptor, alpha	NM_009024|Rara|19401|retinoic acid receptor, alpha	BC010216|Rara|19401|retinoic acid receptor, alpha
mm9_v1_chr9_+_56919839_56919849	0.0259928	FOX{I1,J2}.p2	NM_001110351|Sin3a|20466|transcriptional regulator, SIN3A (yeast)
mm9_v1_chr1_-_95698465_95698512	0.0254267	FOX{I1,J2}.p2	AK088416|Dtymk|21915|deoxythymidylate kinase	AK019445|Dtymk|21915|deoxythymidylate kinase	AK160747|Dtymk|21915|deoxythymidylate kinase	BC069902|Dtymk|21915|deoxythymidylate kinase	AK009220|Dtymk|21915|deoxythymidylate kinase	AK019288|Dtymk|21915|deoxythymidylate kinase	NM_001105667|Dtymk|21915|deoxythymidylate kinase	NM_023136|Dtymk|21915|deoxythymidylate kinase
mm9_v1_chr13_+_104968863_104968906	0.0247586	FOX{I1,J2}.p2	AK039280|Trim23|81003|tripartite motif-containing 23
mm9_v1_chr3_-_124128908_124128956	0.024121	FOX{I1,J2}.p2	AK005660|1700006A11Rik|71824|RIKEN cDNA 1700006A11 gene	BC137977|1700006A11Rik|71824|RIKEN cDNA 1700006A11 gene	NM_027939|1700006A11Rik|71824|RIKEN cDNA 1700006A11 gene	AK132965|1700006A11Rik|71824|RIKEN cDNA 1700006A11 gene
mm9_v1_chr6_+_40914752_40914770	0.0239529	FOX{I1,J2}.p2	BC132243|1810009J06Rik|73626|RIKEN cDNA 1810009J06 gene	BC132245|1810009J06Rik|73626|RIKEN cDNA 1810009J06 gene	AK007406|1810009J06Rik|73626|RIKEN cDNA 1810009J06 gene	NM_023707|1810009J06Rik|73626|RIKEN cDNA 1810009J06 gene
mm9_v1_chr17_+_36974084_36974137	0.0231441	FOX{I1,J2}.p2	AK171019|Trim26|22670|tripartite motif-containing 26	NM_001025599|Trim26|22670|tripartite motif-containing 26	AK042252|Trim26|22670|tripartite motif-containing 26	BC037110|Trim26|22670|tripartite motif-containing 26
mm9_v1_chr2_+_91570249_91570297	0.0231141	FOX{I1,J2}.p2	NM_001080754|Ambra1|228361|autophagy/beclin 1 regulator 1	NM_172669|Ambra1|228361|autophagy/beclin 1 regulator 1
mm9_v1_chr16_-_89011003_89011003	0.0227983	FOX{I1,J2}.p2	AK004025|Krtap22-2|68740|keratin associated protein 22-2	NM_001191018|Krtap22-2|68740|keratin associated protein 22-2
mm9_v1_chr2_-_112870487_112870487	0.0227833	FOX{I1,J2}.p2	NM_177652|Ryr3|20192|ryanodine receptor 3
mm9_v1_chr2_+_81893814_81893814	0.0225685	FOX{I1,J2}.p2	AK049881|Zfp804a|241514|zinc finger protein 804A	NM_175513|Zfp804a|241514|zinc finger protein 804A
mm9_v1_chr1_+_79772668_79772831	0.0225124	FOX{I1,J2}.p2	AK156814|Mrpl44|69163|mitochondrial ribosomal protein L44	AK019986|Mrpl44|69163|mitochondrial ribosomal protein L44	AK146024|Mrpl44|69163|mitochondrial ribosomal protein L44	AK150537|Mrpl44|69163|mitochondrial ribosomal protein L44	AK151854|Mrpl44|69163|mitochondrial ribosomal protein L44
mm9_v1_chr3_-_151929210_151929283	0.0219937	FOX{I1,J2}.p2	AK136102|Nexn|68810|nexilin	BC052878|Nexn|68810|nexilin	AK163414|Nexn|68810|nexilin	NM_199465|Nexn|68810|nexilin
mm9_v1_chr2_+_118639738_118639738	0.021913	FOX{I1,J2}.p2	AK006328|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed	NM_026412|D2Ertd750e|51944|DNA segment, Chr 2, ERATO Doi 750, expressed
mm9_v1_chr16_+_33518680_33518680	0.0213997	FOX{I1,J2}.p2	BC030926|Slc12a8|171286|solute carrier family 12 (potassium/chloride transporters), member 8	NM_001083902|Slc12a8|171286|solute carrier family 12 (potassium/chloride transporters), member 8
mm9_v1_chr5_+_148241736_148241750	0.0210104	FOX{I1,J2}.p2	AK153632|Pan3|72587|PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm9_v1_chr11_+_49988344_49988383	0.0207753	FOX{I1,J2}.p2	AK019392|3010026O09Rik|68067|RIKEN cDNA 3010026O09 gene	NM_026543|3010026O09Rik|68067|RIKEN cDNA 3010026O09 gene	BC028428|3010026O09Rik|68067|RIKEN cDNA 3010026O09 gene	AK003636|3010026O09Rik|68067|RIKEN cDNA 3010026O09 gene
mm9_v1_chr1_-_158869401_158869517	0.0206792	FOX{I1,J2}.p2	AK019543|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159966|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2
mm9_v1_chr6_-_85401198_85401297	0.0199428	FOX{I1,J2}.p2	BC115452|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene	AK006658|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene	NM_001163427|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene	NM_028505|1700040I03Rik|73327|RIKEN cDNA 1700040I03 gene
mm9_v1_chr17_+_70911084_70911126	0.019088	FOX{I1,J2}.p2	NM_001128181|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	AK136926|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr17_+_28450461_28450474	0.0173821	FOX{I1,J2}.p2	NM_001163819|Fance|72775|Fanconi anemia, complementation group E	NM_001163820|Fance|72775|Fanconi anemia, complementation group E
mm9_v1_chr3_+_107989221_107989318	0.0172705	FOX{I1,J2}.p2	AK173118|Amigo1|229715|adhesion molecule with Ig like domain 1	NM_001004293|Amigo1|229715|adhesion molecule with Ig like domain 1	NM_146137|Amigo1|229715|adhesion molecule with Ig like domain 1	BC022907|Amigo1|229715|adhesion molecule with Ig like domain 1	AK035960|Amigo1|229715|adhesion molecule with Ig like domain 1	BC010598|Amigo1|229715|adhesion molecule with Ig like domain 1
mm9_v1_chr7_-_121261237_121261289	0.0170789	FOX{I1,J2}.p2	BC003871|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	AK172113|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	AK172037|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2
mm9_v1_chr2_+_9804107_9804137	0.0169015	FOX{I1,J2}.p2	AK144308|4930412O13Rik|381347|RIKEN cDNA 4930412O13 gene
mm9_v1_chr7_-_13595141_13595224	0.0165763	FOX{I1,J2}.p2	BC094359|Zbtb45|232879|zinc finger and BTB domain containing 45	NM_001024699|Zbtb45|232879|zinc finger and BTB domain containing 45	AK155880|Zbtb45|232879|zinc finger and BTB domain containing 45	AK166382|Zbtb45|232879|zinc finger and BTB domain containing 45	AK154877|Zbtb45|232879|zinc finger and BTB domain containing 45
mm9_v1_chr4_+_59594516_59594564	0.0162599	FOX{I1,J2}.p2	AJ293845|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	AK144948|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	BC002211|Hsdl2|72479|hydroxysteroid dehydrogenase like 2
mm9_v1_chr8_+_49184445_49184445	0.0160075	FOX{I1,J2}.p2	NM_001161516|Dctd|320685|dCMP deaminase
mm9_v1_chr4_+_32702401_32702487	0.0159841	FOX{I1,J2}.p2	AK165109|Casp8ap2|26885|caspase 8 associated protein 2	NM_001122978|Casp8ap2|26885|caspase 8 associated protein 2	NM_011997|Casp8ap2|26885|caspase 8 associated protein 2	AK142148|Casp8ap2|26885|caspase 8 associated protein 2	AF132726|Casp8ap2|26885|caspase 8 associated protein 2
mm9_v1_chr6_-_29114604_29114752	0.0159834	FOX{I1,J2}.p2	BC024602|Rbm28|68272|RNA binding motif protein 28	AK156773|Rbm28|68272|RNA binding motif protein 28	BC040811|Rbm28|68272|RNA binding motif protein 28	AK012408|Rbm28|68272|RNA binding motif protein 28	AK019296|Rbm28|68272|RNA binding motif protein 28	AK019436|Rbm28|68272|RNA binding motif protein 28	AK161670|Rbm28|68272|RNA binding motif protein 28	AK013047|Rbm28|68272|RNA binding motif protein 28	AK167050|Rbm28|68272|RNA binding motif protein 28	NM_133925|Rbm28|68272|RNA binding motif protein 28
mm9_v1_chr11_+_19879583_19879598	0.0159242	FOX{I1,J2}.p2	
mm9_v1_chr11_-_12364754_12364809	0.0159058	FOX{I1,J2}.p2	AK049730|Cobl|12808|cordon-bleu	AY308745|Cobl|12808|cordon-bleu	BC145116|Cobl|12808|cordon-bleu	BC145118|Cobl|12808|cordon-bleu	BC150706|Cobl|12808|cordon-bleu	AK028833|Cobl|12808|cordon-bleu
mm9_v1_chr11_-_96168185_96168223	0.015372	FOX{I1,J2}.p2	AK002860|0610040B09Rik|75395|RIKEN cDNA 0610040B09 gene
mm9_v1_chr7_-_121261292_121261300	0.0153587	FOX{I1,J2}.p2	AK011419|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	AK078870|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2	NM_025846|Rras2|66922|related RAS viral (r-ras) oncogene homolog 2
mm9_v1_chr2_-_130408276_130408310	0.0152506	FOX{I1,J2}.p2	NM_009732|Avp|11998|arginine vasopressin	BC051997|Avp|11998|arginine vasopressin	AK138179|Avp|11998|arginine vasopressin
mm9_v1_chr16_+_25683848_25683850	0.0150912	FOX{I1,J2}.p2	AK138305|Trp63|22061|transformation related protein 63	NM_001127259|Trp63|22061|transformation related protein 63	NM_001127260|Trp63|22061|transformation related protein 63	NM_001127261|Trp63|22061|transformation related protein 63
mm9_v1_chr14_+_22808966_22809087	0.0145972	FOX{I1,J2}.p2	AK039230|A330001L22Rik|399632|RIKEN cDNA A330001L22 gene
mm9_v1_chr6_+_56985906_56985906	0.014455	FOX{I1,J2}.p2	AF394951|Vmn1r8|171205|vomeronasal 1 receptor 8	NM_134187|Vmn1r8|171205|vomeronasal 1 receptor 8
mm9_v1_chr9_+_122943854_122943866	0.0142163	FOX{I1,J2}.p2	AK035279|Tgm4|331046|transglutaminase 4 (prostate)	NM_177911|Tgm4|331046|transglutaminase 4 (prostate)	AF486627|Tgm4|331046|transglutaminase 4 (prostate)	BC141297|Tgm4|331046|transglutaminase 4 (prostate)	BC145622|Tgm4|331046|transglutaminase 4 (prostate)
mm9_v1_chr6_-_57273628_57273628	0.0142014	FOX{I1,J2}.p2	NM_134184|Vmn1r16|171202|vomeronasal 1 receptor 16
mm9_v1_chr6_-_17980339_17980361	0.0133875	FOX{I1,J2}.p2	BC026373|Wnt2|22413|wingless-related MMTV integration site 2	AK045120|Wnt2|22413|wingless-related MMTV integration site 2	AK012093|Wnt2|22413|wingless-related MMTV integration site 2	AK167642|Wnt2|22413|wingless-related MMTV integration site 2
mm9_v1_chr13_+_41746130_41746130	0.0127597	FOX{I1,J2}.p2	BC098182|Gm5082|328231|predicted gene 5082	NM_001145878|Gm5082|328231|predicted gene 5082
mm9_v1_chr15_-_36701729_36701849	0.0121884	FOX{I1,J2}.p2	AK149013|Ywhaz|22631|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide
mm9_v1_chr16_+_17045284_17045304	0.0119809	FOX{I1,J2}.p2	AK018549|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr19_+_9092973_9093058	0.0118033	FOX{I1,J2}.p2	AK003448|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)
mm9_v1_chr15_-_95909856_95909983	0.0114141	FOX{I1,J2}.p2	AK135992|D030018L15Rik|402773|nuclear receptor coactivator 2 pseudogene	AK137238|D030018L15Rik|402773|nuclear receptor coactivator 2 pseudogene
mm9_v1_chr5_+_46061125_46061269	0.0112025	FOX{I1,J2}.p2	NM_019438|Ncapg|54392|non-SMC condensin I complex, subunit G	AK017756|Ncapg|54392|non-SMC condensin I complex, subunit G
mm9_v1_chr11_+_74743743_74743795	0.011093	FOX{I1,J2}.p2	AK129203|Smg6|103677|Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)
mm9_v1_chr19_+_5026004_5026105	0.0106809	FOX{I1,J2}.p2	X86682|Slc29a2|13340|solute carrier family 29 (nucleoside transporters), member 2
mm9_v1_chr13_+_47289371_47289389	0.0103258	FOX{I1,J2}.p2	AK052846|Rnf144b|218215|ring finger protein 144B	NM_001170643|Rnf144b|218215|ring finger protein 144B	AK040939|Rnf144b|218215|ring finger protein 144B	BC025007|Rnf144b|218215|ring finger protein 144B
mm9_v1_chr4_+_101390472_101390526	0.00970625	FOX{I1,J2}.p2	AK155891|Lepr|16847|leptin receptor	U58861|Lepr|16847|leptin receptor	U58862|Lepr|16847|leptin receptor	U58863|Lepr|16847|leptin receptor	AB519175|Lepr|16847|leptin receptor	AB519174|Lepr|16847|leptin receptor	AK140785|Lepr|16847|leptin receptor	U42467|Lepr|16847|leptin receptor	U46135|Lepr|16847|leptin receptor	AB519177|Lepr|16847|leptin receptor	AB519178|Lepr|16847|leptin receptor	AB519176|Lepr|16847|leptin receptor	BC082551|Lepr|16847|leptin receptor
mm9_v1_chr13_+_67006343_67006350	0.00950665	FOX{I1,J2}.p2	AK139034|Gm10767|100038538|predicted gene 10767	NM_001177750|Gm10767|100038538|predicted gene 10767
mm9_v1_chr5_-_31522802_31522840	0.00891004	FOX{I1,J2}.p2	U42383|Ppm1g|14208|protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
mm9_v1_chr10_-_39977451_39977507	0.00879015	FOX{I1,J2}.p2	AK005261|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	AK007816|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	AK162053|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	AK168070|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	AK010514|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	NM_026113|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	BC048446|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha
mm9_v1_chr3_+_55586431_55586482	0.0087623	FOX{I1,J2}.p2	NM_010750|Mab21l1|17116|mab-21-like 1 (C. elegans)	AK043552|Mab21l1|17116|mab-21-like 1 (C. elegans)	AF040945|Mab21l1|17116|mab-21-like 1 (C. elegans)	AF228913|Mab21l1|17116|mab-21-like 1 (C. elegans)	AK032114|Mab21l1|17116|mab-21-like 1 (C. elegans)	BC014750|Mab21l1|17116|mab-21-like 1 (C. elegans)
mm9_v1_chr12_+_85029101_85029215	0.00865201	FOX{I1,J2}.p2	BC014744|Psen1|19164|presenilin 1	BC071233|Psen1|19164|presenilin 1	AK134615|Psen1|19164|presenilin 1	AK148101|Psen1|19164|presenilin 1	AK165984|Psen1|19164|presenilin 1	L42177|Psen1|19164|presenilin 1	AK134232|Psen1|19164|presenilin 1	BC030409|Psen1|19164|presenilin 1
mm9_v1_chr13_+_32893929_32893948	0.00807452	FOX{I1,J2}.p2	AK041886|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr8_+_28153059_28153137	0.00800318	FOX{I1,J2}.p2	AK049905|Prosc|114863|proline synthetase co-transcribed	BC047992|Prosc|114863|proline synthetase co-transcribed	AK160172|Prosc|114863|proline synthetase co-transcribed	AK032308|Prosc|114863|proline synthetase co-transcribed	AK134549|Prosc|114863|proline synthetase co-transcribed	AK191605|Prosc|114863|proline synthetase co-transcribed	AK203439|Prosc|114863|proline synthetase co-transcribed
mm9_v1_chr7_-_77511242_77511282	0.00755594	FOX{I1,J2}.p2	AK012573|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK012322|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr1_+_34496673_34496884	0.00738116	FOX{I1,J2}.p2	NM_178601|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK151176|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK152214|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK008178|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK010504|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK018039|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK166903|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK084933|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK013334|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	BC069930|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AF334609|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	AK004135|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)	BC037602|Imp4|27993|IMP4, U3 small nucleolar ribonucleoprotein, homolog (yeast)
mm9_v1_chr5_-_88020575_88020635	0.00631785	FOX{I1,J2}.p2	BC034891|Sult1e1|20860|sulfotransferase family 1E, member 1	AK015750|Sult1e1|20860|sulfotransferase family 1E, member 1	S78182|Sult1e1|20860|sulfotransferase family 1E, member 1	NM_023135|Sult1e1|20860|sulfotransferase family 1E, member 1
mm9_v1_chr12_-_93024875_93024875	0.00573877	FOX{I1,J2}.p2	AK036612|Ston2|108800|stonin 2	NM_175367|Ston2|108800|stonin 2
mm9_v1_chr7_-_11751496_11751496	0.00561908	FOX{I1,J2}.p2	EF143406|Zscan4d|545913|zinc finger and SCAN domain containing 4D	NM_001100186|Zscan4d|545913|zinc finger and SCAN domain containing 4D
mm9_v1_chr16_+_13265171_13265171	0.00561441	FOX{I1,J2}.p2	BC028459|Mkl2|239719|MKL/myocardin-like 2	NM_181860|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr3_+_57229331_57229351	0.00524252	FOX{I1,J2}.p2	NM_145539|Tm4sf4|229302|transmembrane 4 superfamily member 4
mm9_v1_chr14_+_99498642_99498692	0.00504103	FOX{I1,J2}.p2	AK017107|Pibf1|52023|progesterone immunomodulatory binding factor 1	NM_029320|Pibf1|52023|progesterone immunomodulatory binding factor 1	NM_029454|Pibf1|52023|progesterone immunomodulatory binding factor 1
mm9_v1_chr7_+_134380580_134380598	0.0045089	FOX{I1,J2}.p2	AK218462|Zfp553|233887|zinc finger protein 553
mm9_v1_chr16_+_17070249_17070422	0.00437864	FOX{I1,J2}.p2	AK011452|Ypel1|106369|yippee-like 1 (Drosophila)	AK076063|Ypel1|106369|yippee-like 1 (Drosophila)	AK133401|Ypel1|106369|yippee-like 1 (Drosophila)	AF190624|Ypel1|106369|yippee-like 1 (Drosophila)	BC049737|Ypel1|106369|yippee-like 1 (Drosophila)	AK139453|Ypel1|106369|yippee-like 1 (Drosophila)	AK006137|Ypel1|106369|yippee-like 1 (Drosophila)	AK006858|Ypel1|106369|yippee-like 1 (Drosophila)	AK005955|Ypel1|106369|yippee-like 1 (Drosophila)	AK006049|Ypel1|106369|yippee-like 1 (Drosophila)	AK019819|Ypel1|106369|yippee-like 1 (Drosophila)	AK014931|Ypel1|106369|yippee-like 1 (Drosophila)	NM_023249|Ypel1|106369|yippee-like 1 (Drosophila)	AK018910|Ypel1|106369|yippee-like 1 (Drosophila)	AK006505|Ypel1|106369|yippee-like 1 (Drosophila)
mm9_v1_chr11_-_70817905_70817971	0.00400336	FOX{I1,J2}.p2	BC027842|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	BC052172|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK035177|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	NM_178367|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33	AK087592|Dhx33|216877|DEAH (Asp-Glu-Ala-His) box polypeptide 33
mm9_v1_chr1_+_72330942_72330988	0.00346176	FOX{I1,J2}.p2	AK034935|Tmem169|271711|transmembrane protein 169	AK043681|Tmem169|271711|transmembrane protein 169	NM_175564|Tmem169|271711|transmembrane protein 169	AK084021|Tmem169|271711|transmembrane protein 169
mm9_v1_chr9_+_78137734_78137734	0.00335004	FOX{I1,J2}.p2	NM_001122660|Gm10639|100042314|predicted gene 10639
mm9_v1_chr5_-_138628389_138628461	0.00324895	FOX{I1,J2}.p2	AK207383|Taf6|21343|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC058583|Taf6|21343|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_009315|Taf6|21343|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK154867|Taf6|21343|TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr10_+_82323313_82323353	0.00280706	FOX{I1,J2}.p2	BC020274|Txnrd1|50493|thioredoxin reductase 1	AK177272|Txnrd1|50493|thioredoxin reductase 1	AK180432|Txnrd1|50493|thioredoxin reductase 1	AK184063|Txnrd1|50493|thioredoxin reductase 1	AK185936|Txnrd1|50493|thioredoxin reductase 1
mm9_v1_chr11_-_43415012_43415033	0.00273423	FOX{I1,J2}.p2	NM_008375|Fabp6|16204|fatty acid binding protein 6, ileal (gastrotropin)	BC119289|Fabp6|16204|fatty acid binding protein 6, ileal (gastrotropin)	BC120767|Fabp6|16204|fatty acid binding protein 6, ileal (gastrotropin)
mm9_v1_chr5_+_148081701_148081706	0.00226862	FOX{I1,J2}.p2	AK020261|Pdx1|18609|pancreatic and duodenal homeobox 1	BC103572|Pdx1|18609|pancreatic and duodenal homeobox 1	BC103581|Pdx1|18609|pancreatic and duodenal homeobox 1	BC103582|Pdx1|18609|pancreatic and duodenal homeobox 1	BC105642|Pdx1|18609|pancreatic and duodenal homeobox 1	NM_008814|Pdx1|18609|pancreatic and duodenal homeobox 1
mm9_v1_chr3_+_136598485_136598597	0.00171137	FOX{I1,J2}.p2	AK053582|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr8_+_95379212_95379353	0.000689227	FOX{I1,J2}.p2	AK039431|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2	NM_173014|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2	BC144806|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2	BC150666|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2	AB244716|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2
mm9_v1_chr7_-_117758395_117758412	0.000186524	FOX{I1,J2}.p2	AK173257|Sbf2|319934|SET binding factor 2	AK048952|Sbf2|319934|SET binding factor 2	BC067204|Sbf2|319934|SET binding factor 2
